Jatropha Genome Database

JcCA0316871.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0316871.20 - phase: 0 
         (185 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G19690.1 | Symbols: PLA2-BETA | PLA2-BETA (PHOSPHOLIPASE A2-B...   130   4e-31
AT4G29460.1 | Symbols:  | phospholipase A2 gamma, secretory low ...   130   6e-31
AT4G29470.1 | Symbols:  | phospholipase A2, putative | chr4:1448...   125   2e-29
AT2G06925.1 | Symbols: ATSPLA2-ALPHA, PLA2-ALPHA | PLA2-ALPHA; p...    68   3e-12

>AT2G19690.1 | Symbols: PLA2-BETA | PLA2-BETA (PHOSPHOLIPASE
           A2-BETA); calcium ion binding / phospholipase A2 |
           chr2:8503326-8504549 FORWARD
          Length = 147

 Score =  130 bits (327), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 57/112 (50%), Positives = 76/112 (67%), Gaps = 6/112 (5%)

Query: 75  KCSKTCVAENCNSVGIRYGKYCGVGWTGCPGEKPCDDLDACCKIHDECVEKKGLMSIKCH 134
           +C++TC+A+NC+++ IRYGKYCG+G +GCPGE+PCDDLDACCKIHD CVE  G+ +I CH
Sbjct: 30  ECTRTCIAQNCDTLSIRYGKYCGIGHSGCPGEEPCDDLDACCKIHDHCVELNGMTNISCH 89

Query: 135 EXXX------XXXXXXXXXXXIGFSRDCTYETAVPTMLQGMDMAILLSQLGS 180
           +                    +GFS  C Y   +PT+ QGMD+ IL SQLG+
Sbjct: 90  KKFQRCVNRLSKAIKQSKNKKVGFSTKCPYSVVIPTVNQGMDIGILFSQLGN 141


>AT4G29460.1 | Symbols:  | phospholipase A2 gamma, secretory low
           molecular weight | chr4:14483066-14483930 REVERSE
          Length = 187

 Score =  130 bits (326), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 58/115 (50%), Positives = 71/115 (61%), Gaps = 6/115 (5%)

Query: 72  SQVKCSKTCVAENCNSVGIRYGKYCGVGWTGCPGEKPCDDLDACCKIHDECVEKKGLMSI 131
           SQ KCS TC+A+NCNS+GIRYGKYCG+G+ GCPGE PCDDLDACC  HD CV+ KG+  +
Sbjct: 25  SQEKCSNTCIAQNCNSLGIRYGKYCGIGYFGCPGEPPCDDLDACCMTHDNCVDLKGMTYV 84

Query: 132 KCHEXX------XXXXXXXXXXXXIGFSRDCTYETAVPTMLQGMDMAILLSQLGS 180
            CH+                    IGFS  C Y   +PT+  GMD  I  S +G+
Sbjct: 85  NCHKQFKRCVNKLSKSIKHSNGEKIGFSTQCPYSIVIPTVFNGMDYGIFFSGIGN 139


>AT4G29470.1 | Symbols:  | phospholipase A2, putative |
           chr4:14484591-14485714 REVERSE
          Length = 191

 Score =  125 bits (313), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 55/115 (47%), Positives = 73/115 (63%), Gaps = 6/115 (5%)

Query: 72  SQVKCSKTCVAENCNSVGIRYGKYCGVGWTGCPGEKPCDDLDACCKIHDECVEKKGLMSI 131
           SQ KCSKTC+A+ CN +GIRYGKYCG+G+ GCPGE PCDDLD CC  HD CV+ KG+  +
Sbjct: 25  SQEKCSKTCIAQKCNVLGIRYGKYCGIGYFGCPGEPPCDDLDDCCMTHDNCVDLKGMTYV 84

Query: 132 KCHEXXX------XXXXXXXXXXXIGFSRDCTYETAVPTMLQGMDMAILLSQLGS 180
            CH+                    +GFS++C Y T +PT+ +GM+  I  S +G+
Sbjct: 85  DCHKQFQRCVNELKQSIQESNNQKVGFSKECPYSTVIPTVYRGMNYGIFFSGIGN 139


>AT2G06925.1 | Symbols: ATSPLA2-ALPHA, PLA2-ALPHA | PLA2-ALPHA;
           phospholipase A2 | chr2:2842475-2843212 REVERSE
          Length = 148

 Score = 68.2 bits (165), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 29/53 (54%), Positives = 40/53 (75%), Gaps = 1/53 (1%)

Query: 75  KCSKTCVAENCN-SVGIRYGKYCGVGWTGCPGEKPCDDLDACCKIHDECVEKK 126
           +CS+ C +E C+    +RYGKYCG+ ++GCPGE+PCD LD+CC  HD CV+ K
Sbjct: 37  ECSRKCESEFCSVPPFLRYGKYCGLLYSGCPGERPCDGLDSCCMKHDACVQSK 89