Jatropha Genome Database

JcCA0316521.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0316521.10 + phase: 0 /pseudo/partial
         (207 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G29120.1 | Symbols:  | 6-phosphogluconate dehydrogenase NAD-b...   116   1e-26
AT1G71180.1 | Symbols:  | 6-phosphogluconate dehydrogenase NAD-b...    77   1e-14
AT1G71170.1 | Symbols:  | 6-phosphogluconate dehydrogenase NAD-b...    71   4e-13

>AT4G29120.1 | Symbols:  | 6-phosphogluconate dehydrogenase
           NAD-binding domain-containing protein |
           chr4:14350861-14351865 FORWARD
          Length = 334

 Score =  116 bits (290), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 88/223 (39%), Positives = 115/223 (51%), Gaps = 24/223 (10%)

Query: 1   MPFDLLRR-----VLVLYLQHCSVATNT---EFVSLSNTRIGSIDIRVMGRSVYAHL--A 50
           MP  LLRR     V+  +    S+A++T   + ++ SNT+IG I   VMGRS+  HL  A
Sbjct: 1   MPL-LLRRFPSPSVVSSFFLRRSMASSTISSDIITPSNTKIGWIGTGVMGRSMCGHLIKA 59

Query: 51  GYTHRLHSDPLXRPTSRSHWG-----QPCSISYCR--CLSIXCHFFHRRLSFPHPSSPTG 103
           GYT  + +  + +  +    G      P S++       +I  +    R     P S   
Sbjct: 60  GYTVTVFNRTISKAQTLIDMGANVADSPNSVAEQSDVVFTIVGYPSDVRHVLLDPKSGA- 118

Query: 104 FXXXXXXXXXXXXXXCCMTTFDPFLASEISDVAFAKNYHSIDAPVSRGDRGDKNKTHAIF 163
                            MTT +P LA EI+  A  KN  SIDAPVS GD G KN   +IF
Sbjct: 119 -----LSGLRQGGVLVDMTTSEPSLAEEIAKAASFKNCFSIDAPVSGGDLGAKNGKLSIF 173

Query: 164 AGGDKVVIDRLNPLFVLMGKVNYMGAPGKGQLAKLTNQIAISS 206
           AGGD+  + RL+PLF LMGKVN+MG  GKGQ AKL NQI I+S
Sbjct: 174 AGGDETTVKRLDPLFSLMGKVNFMGTSGKGQFAKLANQITIAS 216


>AT1G71180.1 | Symbols:  | 6-phosphogluconate dehydrogenase
           NAD-binding domain-containing protein |
           chr1:26832335-26833291 FORWARD
          Length = 318

 Score = 76.6 bits (187), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 40/87 (45%), Positives = 54/87 (62%)

Query: 121 MTTFDPFLASEISDVAFAKNYHSIDAPVSRGDRGDKNKTHAIFAGGDKVVIDRLNPLFVL 180
           MT+  P LA EI   A  +N  ++DAPVS GD G +  T  IFAGGD  +++ L+P+   
Sbjct: 127 MTSSKPGLAREIHAEARRRNCWAVDAPVSGGDAGAREGTLGIFAGGDSEIVEWLSPVMKN 186

Query: 181 MGKVNYMGAPGKGQLAKLTNQIAISSH 207
           +G V YMG  G GQ  K+ NQIA +S+
Sbjct: 187 IGTVTYMGEAGSGQSCKIGNQIAGASN 213


>AT1G71170.1 | Symbols:  | 6-phosphogluconate dehydrogenase
           NAD-binding domain-containing protein |
           chr1:26830673-26831572 FORWARD
          Length = 299

 Score = 71.2 bits (173), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 37/87 (42%), Positives = 51/87 (58%)

Query: 121 MTTFDPFLASEISDVAFAKNYHSIDAPVSRGDRGDKNKTHAIFAGGDKVVIDRLNPLFVL 180
           MT+  P LA EI   A  ++  ++DAPVS GD G +     IFAGGD  +++ L P+   
Sbjct: 106 MTSSKPGLAREIYAEARRRDCWAVDAPVSGGDAGAREGKLTIFAGGDSEIVEWLAPVMKT 165

Query: 181 MGKVNYMGAPGKGQLAKLTNQIAISSH 207
           MG V +MG  G GQ  K+ NQI + S+
Sbjct: 166 MGIVRFMGGAGSGQSCKIGNQICVGSN 192