Jatropha Genome Database
- JcCA0316511.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0316511.10 + phase: 0
(801 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G35130.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 925 0.0
AT1G11290.1 | Symbols: CRR22 | CRR22 (CHLORORESPIRATORY REDUCTIO... 538 e-153
AT4G18750.1 | Symbols: DOT4 | DOT4 (DEFECTIVELY ORGANIZED TRIBUT... 523 e-148
AT1G15510.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 504 e-143
AT4G33990.1 | Symbols: EMB2758 | EMB2758 (embryo defective 2758)... 483 e-136
AT3G23330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 482 e-136
AT4G30700.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 478 e-135
AT5G16860.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 474 e-134
AT3G57430.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 472 e-133
AT3G12770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 456 e-128
AT4G13650.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 456 e-128
AT3G22690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 452 e-127
AT1G18485.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 447 e-125
AT3G03580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 445 e-125
AT1G16480.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 443 e-124
AT3G26782.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED I... 442 e-124
AT1G08070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 441 e-123
AT3G49170.1 | Symbols: EMB2261 | EMB2261 (embryo defective 2261)... 432 e-121
AT5G39350.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 431 e-121
AT3G15130.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 431 e-120
AT2G29760.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 424 e-119
AT2G27610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 423 e-118
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 420 e-117
AT4G33170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 419 e-117
AT3G11460.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 419 e-117
AT4G14820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 415 e-116
AT5G27110.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 409 e-114
AT3G46790.1 | Symbols: CRR2 | CRR2 (CHLORORESPIRATORY REDUCTION ... 407 e-113
AT3G02010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 405 e-113
AT4G21300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 405 e-113
AT4G02750.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 403 e-112
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 403 e-112
AT5G09950.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 400 e-111
AT3G49140.2 | Symbols: | EXPRESSED IN: 22 plant structures; EXP... 397 e-110
AT3G49140.1 | Symbols: | EXPRESSED IN: 23 plant structures; EXP... 396 e-110
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 394 e-109
AT5G13230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 392 e-109
AT3G13770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 391 e-109
AT3G53360.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 390 e-108
AT4G21065.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 389 e-108
AT2G03380.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 389 e-108
AT3G61170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 389 e-108
AT3G01580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 388 e-108
AT4G14850.1 | Symbols: LOI1 | LOI1 (lovastatin insensitive 1) | ... 388 e-108
AT5G13270.1 | Symbols: RARE1 | pentatricopeptide (PPR) repeat-co... 388 e-108
AT3G49710.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 388 e-108
AT2G13600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 385 e-107
AT5G40410.1 | Symbols: | INVOLVED IN: biological_process unknow... 385 e-107
AT3G63370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 384 e-106
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 381 e-105
AT4G39530.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 380 e-105
AT3G24000.1 | Symbols: | INVOLVED IN: biological_process unknow... 377 e-104
AT5G66520.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 377 e-104
AT2G40720.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 375 e-104
AT3G08820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 374 e-103
AT5G04780.1 | Symbols: | INVOLVED IN: biological_process unknow... 371 e-103
AT3G09040.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 371 e-102
AT1G25360.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 370 e-102
AT2G01510.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 369 e-102
AT5G65570.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 365 e-101
AT4G19191.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 364 e-100
AT2G03880.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 364 e-100
AT1G56690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 363 e-100
AT2G02980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 362 e-100
AT1G19720.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 360 2e-99
AT5G39680.1 | Symbols: EMB2744 | EMB2744 (EMBRYO DEFECTIVE 2744)... 360 2e-99
AT2G33680.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 360 3e-99
AT4G21065.2 | Symbols: | FUNCTIONS IN: molecular_function unkno... 359 4e-99
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 359 4e-99
AT4G37170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 358 9e-99
AT5G46460.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 356 4e-98
AT4G04370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 356 4e-98
AT5G48910.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 355 6e-98
AT3G02330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 353 3e-97
AT1G69350.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 350 2e-96
AT5G52850.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 349 4e-96
AT4G32430.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 349 5e-96
AT5G50390.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 348 6e-96
AT3G22150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 346 3e-95
AT3G25970.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 345 8e-95
AT4G39952.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 342 4e-94
AT2G39620.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 339 4e-93
AT1G59720.1 | Symbols: CRR28 | CRR28 (CHLORORESPIRATORY REDUCTIO... 339 5e-93
AT2G33760.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 338 8e-93
AT3G14330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 338 8e-93
AT4G37380.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 338 9e-93
AT5G08490.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 338 9e-93
AT5G40405.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 338 9e-93
AT4G14050.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 335 7e-92
AT2G41080.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 335 9e-92
AT1G74630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 330 2e-90
AT1G06140.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 330 3e-90
AT5G44230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 330 3e-90
AT3G47840.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 329 4e-90
AT2G17210.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 328 9e-90
AT3G47530.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 328 1e-89
AT3G14730.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 327 2e-89
AT4G16835.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 326 5e-89
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | EMB175 (EMBRYO ... 325 5e-89
AT1G03540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 325 5e-89
AT3G05340.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 324 1e-88
AT3G62890.1 | Symbols: | binding | chr3:23246168-23247973 FORWARD 324 1e-88
AT3G05240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 324 1e-88
AT5G52630.1 | Symbols: MEF1 | MEF1 (MITOCHONDRIAL RNA EDITING FA... 323 4e-88
AT1G04840.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 322 4e-88
AT3G13880.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 322 5e-88
AT3G49740.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 322 7e-88
AT3G25060.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 320 2e-87
AT2G02750.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 320 3e-87
AT4G20770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 319 4e-87
AT1G31920.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 319 6e-87
AT3G15930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 316 3e-86
AT2G34400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 316 5e-86
AT1G71460.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 314 1e-85
AT2G22410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 314 1e-85
AT4G38010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 314 2e-85
AT2G37310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 313 3e-85
AT4G19220.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 313 3e-85
AT1G71420.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 313 4e-85
AT4G15720.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 312 5e-85
AT4G31070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 312 6e-85
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 307 1e-83
AT5G15340.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 307 2e-83
AT5G55740.1 | Symbols: CRR21 | CRR21 (chlororespiratory reductio... 305 6e-83
AT2G04860.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 302 6e-82
AT1G56570.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 301 1e-81
AT4G08210.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 301 1e-81
AT5G06540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 301 1e-81
AT3G56550.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 300 3e-81
AT3G29230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 300 3e-81
AT1G71490.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 298 1e-80
AT1G77010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 298 1e-80
AT2G35030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 295 1e-79
AT1G53600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 294 1e-79
AT5G19020.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 291 1e-78
AT2G20540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 289 4e-78
AT1G09190.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 288 9e-78
AT3G04750.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 288 1e-77
AT1G50270.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 288 1e-77
AT5G50990.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 288 1e-77
AT3G50420.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 285 1e-76
AT1G31430.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 284 1e-76
AT2G46050.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 282 6e-76
AT5G59600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 281 1e-75
AT1G22830.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 281 1e-75
AT1G22830.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 281 1e-75
AT3G26540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 281 2e-75
AT2G44880.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 279 6e-75
AT5G59200.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 275 6e-74
AT2G45350.1 | Symbols: CRR4 | CRR4 (CHLORORESPIRATORY REDUCTION ... 274 2e-73
AT1G17630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 273 3e-73
AT5G56310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 273 4e-73
AT4G22760.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 272 7e-73
AT3G20730.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 270 3e-72
AT2G36980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 268 9e-72
AT4G18520.1 | Symbols: | INVOLVED IN: biological_process unknow... 266 4e-71
AT3G58590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 265 7e-71
AT1G28690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 265 8e-71
AT1G62260.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 264 2e-70
AT1G64310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 263 2e-70
AT5G15300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 263 3e-70
AT1G23450.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 263 4e-70
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 262 6e-70
AT2G21090.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 261 1e-69
AT5G37570.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 260 3e-69
AT1G06145.1 | Symbols: EMB1444 | EMB1444 (EMBRYO DEFECTIVE 1444)... 259 5e-69
AT4G18840.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 253 4e-67
AT5G43790.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 252 7e-67
AT1G34160.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 251 2e-66
AT2G42920.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 250 2e-66
AT1G26900.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 249 7e-66
AT4G25270.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 246 3e-65
AT1G77170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 244 1e-64
AT1G05750.1 | Symbols: PDE247, CLB19 | PDE247 (pigment defective... 244 1e-64
AT1G43980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 242 9e-64
AT3G21470.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 241 1e-63
AT5G08310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 240 3e-63
AT1G13410.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 239 7e-63
AT5G08510.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 238 1e-62
AT5G66500.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 236 4e-62
AT2G36730.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 233 4e-61
AT1G33350.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 230 3e-60
AT2G37320.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 228 1e-59
AT1G14470.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 227 3e-59
AT1G03510.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 222 7e-58
AT4G16470.1 | Symbols: | INVOLVED IN: biological_process unknow... 219 5e-57
AT3G28660.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 213 3e-55
AT3G28640.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 213 4e-55
AT4G14170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 211 2e-54
AT1G74400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 209 4e-54
AT3G18840.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 209 5e-54
AT5G47460.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 208 1e-53
AT5G61800.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 204 2e-52
AT5G42450.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 201 2e-51
AT3G26630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 199 5e-51
AT3G51320.1 | Symbols: | INVOLVED IN: biological_process unknow... 195 8e-50
AT1G09220.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 194 2e-49
AT3G18970.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 192 7e-49
AT1G20230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 187 3e-47
AT2G15690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 183 4e-46
AT1G10330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 176 5e-44
AT2G25580.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 166 5e-41
AT4G32450.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 165 1e-40
AT1G29710.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 158 1e-38
AT5G02860.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 135 2e-31
AT2G34370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 132 9e-31
AT1G62910.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 124 3e-28
AT1G62930.1 | Symbols: | INVOLVED IN: biological_process unknow... 123 4e-28
AT1G12300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 123 5e-28
AT1G62670.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 122 1e-27
AT1G31840.1 | Symbols: | LOCATED IN: endomembrane system; EXPRE... 122 1e-27
AT3G22470.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 122 1e-27
AT1G05670.2 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transfer... 121 2e-27
AT1G05670.1 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transfer... 121 2e-27
AT1G12620.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 121 2e-27
AT4G19440.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 120 3e-27
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 119 6e-27
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 119 7e-27
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 119 1e-26
AT5G61990.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 115 8e-26
AT1G74850.1 | Symbols: PTAC2 | PTAC2 (PLASTID TRANSCRIPTIONALLY ... 115 9e-26
AT1G63080.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 115 1e-25
AT1G62720.1 | Symbols: | INVOLVED IN: biological_process unknow... 114 3e-25
AT1G12775.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED I... 114 3e-25
AT5G39710.1 | Symbols: EMB2745 | EMB2745 (EMBRYO DEFECTIVE 2745)... 113 6e-25
AT2G02150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 112 1e-24
AT1G63150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 112 1e-24
AT5G55840.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 111 2e-24
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 110 4e-24
AT2G31400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 108 1e-23
AT5G65560.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 108 1e-23
AT5G39980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 108 1e-23
AT1G31790.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 108 2e-23
AT2G16880.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 107 3e-23
AT1G12700.1 | Symbols: | helicase domain-containing protein / p... 106 5e-23
AT2G18940.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 106 6e-23
AT4G31850.1 | Symbols: PGR3 | PGR3 (PROTON GRADIENT REGULATION 3... 106 7e-23
AT1G63130.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 106 7e-23
AT2G41720.1 | Symbols: EMB2654 | EMB2654 (EMBRYO DEFECTIVE 2654)... 105 2e-22
AT1G52620.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 105 2e-22
AT3G06920.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 104 2e-22
AT1G06710.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 104 2e-22
AT5G01110.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 104 2e-22
AT2G41720.2 | Symbols: EMB2654 | EMB2654 (EMBRYO DEFECTIVE 2654)... 104 2e-22
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 103 3e-22
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 103 4e-22
AT1G63400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 103 4e-22
AT2G32630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 100 3e-21
AT5G59900.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 100 3e-21
AT3G16710.1 | Symbols: | INVOLVED IN: biological_process unknow... 100 3e-21
AT5G14770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 100 4e-21
AT3G23020.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 100 5e-21
AT4G19900.1 | Symbols: | glycosyl transferase-related | chr4:10... 99 1e-20
AT1G63330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 99 2e-20
AT1G09900.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 99 2e-20
AT5G41170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 98 2e-20
AT1G03560.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 98 2e-20
AT1G73710.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 98 2e-20
AT1G22960.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 98 2e-20
AT2G19280.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 96 7e-20
AT1G74580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 96 1e-19
AT1G13630.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 95 1e-19
AT5G42310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 95 2e-19
AT5G16640.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 95 2e-19
AT1G64580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 94 2e-19
AT2G15630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 94 4e-19
AT3G18110.1 | Symbols: EMB1270 | EMB1270 (embryo defective 1270)... 94 5e-19
AT2G01740.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 93 7e-19
AT1G47580.1 | Symbols: | lipoyltransferase, putative | chr1:174... 92 1e-18
AT1G62680.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:... 92 2e-18
AT3G04760.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 91 2e-18
AT2G17140.1 | Symbols: | EXPRESSED IN: 7 plant structures; EXPR... 91 3e-18
AT4G11690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 91 3e-18
AT4G16390.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:... 89 8e-18
AT1G63230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 9e-18
AT1G09680.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 1e-17
AT4G28010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 88 2e-17
AT3G53700.1 | Symbols: MEE40 | MEE40 (maternal effect embryo arr... 88 2e-17
AT5G64320.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 3e-17
AT5G24830.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 6e-17
AT1G19290.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED I... 87 6e-17
AT1G74750.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 86 7e-17
AT3G16010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 86 8e-17
AT1G13040.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 85 2e-16
AT5G57250.1 | Symbols: | EXPRESSED IN: 9 plant structures; EXPR... 85 2e-16
AT1G20300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 3e-16
AT2G35130.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 4e-16
AT4G20090.1 | Symbols: EMB1025 | EMB1025 (embryo defective 1025)... 84 4e-16
AT1G63630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 83 8e-16
AT1G16830.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 82 1e-15
AT3G59040.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 1e-15
AT3G59040.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 1e-15
AT3G54980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 1e-15
AT1G18900.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 1e-15
AT1G18900.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 1e-15
AT2G06000.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 1e-15
AT2G06000.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 1e-15
AT3G07290.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 2e-15
AT1G51965.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 81 2e-15
AT3G09060.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 6e-15
AT1G79540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 6e-15
AT2G17525.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 8e-15
AT3G53170.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 79 1e-14
AT1G09820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 1e-14
AT3G49730.1 | Symbols: | EXPRESSED IN: 19 plant structures; EXP... 79 2e-14
AT2G39230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 2e-14
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 78 2e-14
AT5G61400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 78 2e-14
AT4G26680.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 4e-14
AT4G01570.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 5e-14
AT5G27270.1 | Symbols: EMB976 | EMB976 (EMBRYO DEFECTIVE 976) | ... 77 6e-14
AT4G34830.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:... 76 8e-14
AT4G30825.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 76 9e-14
AT5G40400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 76 1e-13
AT1G06580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 76 1e-13
AT5G65820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 1e-13
AT1G11710.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 1e-13
AT1G13800.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 3e-13
AT3G48810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 2e-12
AT1G79080.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 71 3e-12
AT1G30290.1 | Symbols: | unknown protein | chr1:10670320-106727... 71 3e-12
AT1G74900.1 | Symbols: OTP43 | OTP43 (organelle transcript proce... 70 5e-12
AT3G60050.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 6e-12
AT5G38730.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 7e-12
AT5G16420.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 1e-11
AT1G10910.1 | Symbols: | INVOLVED IN: biological_process unknow... 69 1e-11
AT2G37230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 1e-11
AT1G79490.1 | Symbols: EMB2217 | EMB2217 (embryo defective 2217)... 68 2e-11
AT5G50280.1 | Symbols: EMB1006 | EMB1006 (embryo defective 1006)... 67 3e-11
AT5G46680.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 3e-11
AT5G18950.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 4e-11
AT5G62370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 4e-11
AT3G16890.1 | Symbols: PPR40 | PPR40 (PENTATRICOPEPTIDE (PPR) DO... 67 6e-11
AT3G61520.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 66 8e-11
AT3G06430.1 | Symbols: EMB2750 | EMB2750 (embryo defective 2750)... 66 9e-11
AT5G28370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 1e-10
AT5G28460.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 1e-10
AT4G26800.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 2e-10
AT4G39620.1 | Symbols: EMB2453 | EMB2453 (embryo defective 2453)... 65 2e-10
AT3G13150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 2e-10
AT3G09650.1 | Symbols: HCF152, CRM3 | HCF152 (HIGH CHLOROPHYLL F... 65 2e-10
AT1G55630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 4e-10
AT2G26790.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 63 7e-10
AT1G02060.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 63 8e-10
AT1G77340.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 63 9e-10
AT3G13160.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 63 9e-10
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 2e-09
AT1G55890.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 2e-09
AT5G15010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 2e-09
AT3G29290.1 | Symbols: emb2076 | emb2076 (embryo defective 2076)... 61 3e-09
AT2G17670.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 3e-09
AT5G48730.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 5e-09
AT5G46100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 6e-09
AT1G08610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 1e-08
AT1G52640.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 2e-08
AT4G02820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 2e-08
AT1G19520.1 | Symbols: NFD5 | NFD5 (NUCLEAR FUSION DEFECTIVE 5) ... 58 2e-08
AT1G77150.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 58 3e-08
AT1G07740.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 3e-08
AT3G22670.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 4e-08
AT3G49240.1 | Symbols: emb1796 | emb1796 (embryo defective 1796)... 57 4e-08
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 56 7e-08
AT5G25630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 8e-08
AT1G10270.1 | Symbols: GRP23 | GRP23 (GLUTAMINE-RICH PROTEIN23);... 55 1e-07
AT3G18020.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 1e-07
AT3G04130.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 2e-07
AT3G04130.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 2e-07
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 4e-07
AT5G18475.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 4e-07
AT1G66345.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 5e-07
AT4G20740.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 6e-07
AT3G46610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 6e-07
AT1G80550.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 6e-07
AT5G13770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 7e-07
AT3G61360.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 9e-07
AT3G62470.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 9e-07
AT5G18390.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 9e-07
AT2G36240.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 52 1e-06
AT5G14820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 2e-06
AT3G62540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 2e-06
AT1G11900.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 3e-06
AT5G11310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 4e-06
AT1G77405.1 | Symbols: | INVOLVED IN: biological_process unknow... 50 5e-06
>AT4G35130.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:16721084-16723498 REVERSE
Length = 804
Score = 925 bits (2390), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/746 (58%), Positives = 564/746 (75%), Gaps = 7/746 (0%)
Query: 59 NSLSLTRSLCEFVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRME 118
N +LTR+L F DS M++AL LF++MN+ D ++WNV+I+GF++ GL+ E + FY RM
Sbjct: 63 NDPALTRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMV 122
Query: 119 YEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVE 178
+ G+ D FT+PFVIK+ + S EGKK+H +IK+G D+YVCNSLI +Y K G
Sbjct: 123 FAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAW 182
Query: 179 VAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCS 238
AEKVFE MP RD+VSWN M++GY +GDG SLM FKEML G KPDR S +S+LG CS
Sbjct: 183 DAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACS 242
Query: 239 IGCCVRGGKEIHCQVIRNGLEL-DIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWN 297
+ GKEIHC +R+ +E D+MV TS++DMY+K G+V YAER+FN M +NIVAWN
Sbjct: 243 HVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWN 302
Query: 298 AMIGGYAINGHFLESFTCLKRMQEDN-LIPDAITMINLLPSCSKFGTLLEGKCIHGYAIR 356
MIG YA NG ++F C ++M E N L PD IT INLLP+ + +LEG+ IHGYA+R
Sbjct: 303 VMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASA----ILEGRTIHGYAMR 358
Query: 357 KMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALEL 416
+ FLPH+VLETAL+DMYG+CGQLK AE +F R+ EKN++SWN+IIAAYVQNG+N ALEL
Sbjct: 359 RGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALEL 418
Query: 417 FHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAK 476
F L + +L PD+ TIASILPAYAE ++SE ++IHAYI K SNT N++V+MYA
Sbjct: 419 FQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAM 478
Query: 477 CGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSL 536
CGDL+ AR+ F+ + K++VSWN++IMAYA+HGFG IS+ LFS M + + PN+STF SL
Sbjct: 479 CGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASL 538
Query: 537 LSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVP 596
L++CSISG+V+EGWE F SMK +Y ID GIEHYGCM+DL+GRTGN AAK+F+EEMP VP
Sbjct: 539 LAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVP 598
Query: 597 TARIWGSLLTASRNNNDIFFAEFAAKHILSHDNDNTGCYVLLANMYAEAGRWEDVEQIKL 656
TARIWGSLL ASRN+ DI AEFAA+ I ++DNTGCYVLL NMYAEAGRWEDV +IKL
Sbjct: 599 TARIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKL 658
Query: 657 VMKKKGLAKTVDCCTVESKGKSQKFINNNKSHQQAYMIYDVLDIILKKIG-EDVYIHSLS 715
+M+ KG+++T TVE+KGKS F N ++SH IY+VLD++ + +G ED+Y+H +S
Sbjct: 659 LMESKGISRTSSRSTVEAKGKSHVFTNGDRSHVATNKIYEVLDVVSRMVGEEDIYVHCVS 718
Query: 716 KFRPADVIKKKMKSPQNHSVKLAICFGLISTAIGKPIIIRKNTRICKDCHIAAKKISRVT 775
+ RP ++K + SP+ HSV+LA CFGLIST G+ + +R NTRIC+ CH +K SR+T
Sbjct: 719 RLRPETLVKSRSNSPRRHSVRLATCFGLISTETGRRVTVRNNTRICRKCHEFLEKASRLT 778
Query: 776 KREIIVGDSKIFHHFEDGRCSCGDYW 801
+REI+VGDSKIFHHF +GRCSCG+YW
Sbjct: 779 RREIVVGDSKIFHHFSNGRCSCGNYW 804
Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 114/238 (47%), Gaps = 2/238 (0%)
Query: 52 KRGMIKPNSLSLTRSLCEFVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVI 111
+RG + P+ + T + + + G + +A +F++M + + WN II + G +
Sbjct: 358 RRGFL-PHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSAL 416
Query: 112 DFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMY 171
+ + + + D+ T ++ A LS EG+++H ++K + + NSL+ MY
Sbjct: 417 ELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMY 476
Query: 172 FKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMI 231
G +E A K F + L+D+VSWN ++ Y V G G S+ F EM+ P++ +
Sbjct: 477 AMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFA 536
Query: 232 SSLGGCSIGCCVRGGKEIHCQVIRN-GLELDIMVQTSLIDMYAKCGKVDYAERVFNEM 288
S L CSI V G E + R G++ I ++D+ + G A+R EM
Sbjct: 537 SLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEM 594
>AT1G11290.1 | Symbols: CRR22 | CRR22 (CHLORORESPIRATORY
REDUCTION22); endonuclease | chr1:3791454-3793883
REVERSE
Length = 809
Score = 538 bits (1386), Expect = e-153, Method: Compositional matrix adjust.
Identities = 276/739 (37%), Positives = 437/739 (59%), Gaps = 3/739 (0%)
Query: 64 TRSLCEFVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIG 123
T+ + F G++D A +FE ++ +++ +++GF+ + + F+ RM Y+ +
Sbjct: 73 TKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVE 132
Query: 124 IDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKV 183
+ F +++K CG GK++HG L+K G D++ L +MY K V A KV
Sbjct: 133 PVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKV 192
Query: 184 FEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCV 243
F+ MP RDLVSWN +V GY G +L K M KP ++++S L S +
Sbjct: 193 FDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLI 252
Query: 244 RGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGY 303
GKEIH +R+G + + + T+L+DMYAKCG ++ A ++F+ M +N+V+WN+MI Y
Sbjct: 253 SVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAY 312
Query: 304 AINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHL 363
N + E+ ++M ++ + P ++++ L +C+ G L G+ IH ++ ++
Sbjct: 313 VQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNV 372
Query: 364 VLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQ 423
+ +L+ MY KC ++ A +FG++ + +VSWNA+I + QNGR +AL F +R++
Sbjct: 373 SVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSR 432
Query: 424 TLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTA 483
T+KPD T S++ A AEL+ K IH + + L N F + A+V MYAKCG + A
Sbjct: 433 TVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIA 492
Query: 484 RRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSIS 543
R FD MS +++ +WN MI Y HGFG +++LF M++ I+PN TF+S++S+CS S
Sbjct: 493 RLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHS 552
Query: 544 GLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGS 603
GLV G + F MK +Y+I+ ++HYG MVDLLGR G L+ A FI +MP+ P ++G+
Sbjct: 553 GLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGA 612
Query: 604 LLTASRNNNDIFFAEFAAKHILSHDNDNTGCYVLLANMYAEAGRWEDVEQIKLVMKKKGL 663
+L A + + ++ FAE AA+ + + D+ G +VLLAN+Y A WE V Q+++ M ++GL
Sbjct: 613 MLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGL 672
Query: 664 AKTVDCCTVESKGKSQKFINNNKSHQQAYMIYDVLDIILKKIGEDVYIHSLSKFRPADV- 722
KT C VE K + F + + +H + IY L+ ++ I E Y+ + +
Sbjct: 673 RKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLVLGVEND 732
Query: 723 IKKKMKSPQNHSVKLAICFGLISTAIGKPIIIRKNTRICKDCHIAAKKISRVTKREIIVG 782
+K+++ S HS KLAI FGL++T G I +RKN R+C DCH A K IS VT REI+V
Sbjct: 733 VKEQLLS--THSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIVVR 790
Query: 783 DSKIFHHFEDGRCSCGDYW 801
D + FHHF++G CSCGDYW
Sbjct: 791 DMQRFHHFKNGACSCGDYW 809
Score = 250 bits (638), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 143/455 (31%), Positives = 253/455 (55%), Gaps = 1/455 (0%)
Query: 138 RLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNC 197
R S E +++ + K GL ++ + L+ ++ ++G V+ A +VFE + + V ++
Sbjct: 46 RCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHT 105
Query: 198 MVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNG 257
M+ G+ + D K+L F M +P + L C +R GKEIH ++++G
Sbjct: 106 MLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSG 165
Query: 258 LELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLK 317
LD+ T L +MYAKC +V+ A +VF+ M +++V+WN ++ GY+ NG + +K
Sbjct: 166 FSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVK 225
Query: 318 RMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCG 377
M E+NL P IT++++LP+ S + GK IHGYA+R F + + TALVDMY KCG
Sbjct: 226 SMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCG 285
Query: 378 QLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILP 437
L+ A +F + E+N+VSWN++I AYVQN +EA+ +F + ++ +KP V++ L
Sbjct: 286 SLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALH 345
Query: 438 AYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVS 497
A A+L + + IH +L L N N+++ MY KC ++ TA F + + LVS
Sbjct: 346 ACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVS 405
Query: 498 WNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMK 557
WN MI+ +A +G ++ FS+M+ ++P+ T+VS++++ + + + + + +
Sbjct: 406 WNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHA-KWIHGVV 464
Query: 558 MDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEM 592
M +D + +VD+ + G + A+ + M
Sbjct: 465 MRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMM 499
Score = 196 bits (498), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 127/429 (29%), Positives = 209/429 (48%), Gaps = 9/429 (2%)
Query: 247 KEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAIN 306
++I V +NGL + QT L+ ++ + G VD A RVF + K V ++ M+ G+A
Sbjct: 54 RQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKV 113
Query: 307 GHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLE 366
++ RM+ D++ P LL C L GK IHG ++ F L
Sbjct: 114 SDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAM 173
Query: 367 TALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLK 426
T L +MY KC Q+ A VF R+ E+++VSWN I+A Y QNG ALE+ + + LK
Sbjct: 174 TGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLK 233
Query: 427 PDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRY 486
P +TI S+LPA + L +S K+IH Y + S S A+V MYAKCG L+TAR+
Sbjct: 234 PSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQL 293
Query: 487 FDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLV 546
FD M +N+VSWN+MI AY + ++ +F +M G++P + + + L +C+ G +
Sbjct: 294 FDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDL 353
Query: 547 NEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLT 606
G + + ++ +D + ++ + + +D A ++ +L
Sbjct: 354 ERG-RFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILG 412
Query: 607 ASRNNNDI----FFAEFAAKHILSHDNDNTGCYVLLANMYAEAGRWEDVEQIKLVMKKKG 662
++N I +F++ ++ + +T YV + AE + I V+ +
Sbjct: 413 FAQNGRPIDALNYFSQMRSRTV----KPDTFTYVSVITAIAELSITHHAKWIHGVVMRSC 468
Query: 663 LAKTVDCCT 671
L K V T
Sbjct: 469 LDKNVFVTT 477
>AT4G18750.1 | Symbols: DOT4 | DOT4 (DEFECTIVELY ORGANIZED
TRIBUTARIES 4) | chr4:10304850-10307465 FORWARD
Length = 871
Score = 523 bits (1348), Expect = e-148, Method: Compositional matrix adjust.
Identities = 276/734 (37%), Positives = 433/734 (58%), Gaps = 3/734 (0%)
Query: 70 FVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTF 129
+ + G + A +F+++ WN+++ + G F I + +M G+ +D++TF
Sbjct: 139 YTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTF 198
Query: 130 PFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPL 189
V K+ L S G+++HG ++K G V NSL+ Y K V+ A KVF+ M
Sbjct: 199 SCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTE 258
Query: 190 RDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEI 249
RD++SWN ++NGY G K L F +ML G + D +++S GC+ + G+ +
Sbjct: 259 RDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAV 318
Query: 250 HCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHF 309
H ++ + +L+DMY+KCG +D A+ VF EM+ +++V++ +MI GYA G
Sbjct: 319 HSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLA 378
Query: 310 LESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETAL 369
E+ + M+E+ + PD T+ +L C+++ L EGK +H + + + AL
Sbjct: 379 GEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNAL 438
Query: 370 VDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCL-RNQTLKPD 428
+DMY KCG ++ AE VF + K+++SWN II Y +N EAL LF+ L + PD
Sbjct: 439 MDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPD 498
Query: 429 AVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFD 488
T+A +LPA A L+ + ++IH YI + S+ +N++V MYAKCG L A FD
Sbjct: 499 ERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFD 558
Query: 489 SMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNE 548
++ K+LVSW MI Y +HGFG +I LF++M+Q GIE +E +FVSLL +CS SGLV+E
Sbjct: 559 DIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDE 618
Query: 549 GWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTAS 608
GW FN M+ + I+ +EHY C+VD+L RTG+L A +FIE MP+ P A IWG+LL
Sbjct: 619 GWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGC 678
Query: 609 RNNNDIFFAEFAAKHILSHDNDNTGCYVLLANMYAEAGRWEDVEQIKLVMKKKGLAKTVD 668
R ++D+ AE A+ + + +NTG YVL+AN+YAEA +WE V++++ + ++GL K
Sbjct: 679 RIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPG 738
Query: 669 CCTVESKGKSQKFINNNKSHQQAYMIYDVLDIILKKIGEDVYIHSLSKFRPADVIK-KKM 727
C +E KG+ F+ + S+ + I L + ++ E+ Y L+K+ D + +K
Sbjct: 739 CSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGY-SPLTKYALIDAEEMEKE 797
Query: 728 KSPQNHSVKLAICFGLISTAIGKPIIIRKNTRICKDCHIAAKKISRVTKREIIVGDSKIF 787
++ HS KLA+ G+IS+ GK I + KN R+C DCH AK +S++T+REI++ DS F
Sbjct: 798 EALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRF 857
Query: 788 HHFEDGRCSCGDYW 801
H F+DG CSC +W
Sbjct: 858 HQFKDGHCSCRGFW 871
Score = 213 bits (543), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 131/472 (27%), Positives = 243/472 (51%), Gaps = 4/472 (0%)
Query: 124 IDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKV 183
ID T V++ C S +GK+V + G D + + L MY G ++ A +V
Sbjct: 92 IDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRV 151
Query: 184 FEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCV 243
F+ + + + WN ++N GD S+ FK+M+ G + D + S V
Sbjct: 152 FDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSV 211
Query: 244 RGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGY 303
GG+++H ++++G V SL+ Y K +VD A +VF+EMT +++++WN++I GY
Sbjct: 212 HGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGY 271
Query: 304 AINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHL 363
NG + + +M + D T++++ C+ + G+ +H ++ F
Sbjct: 272 VSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRED 331
Query: 364 VLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQ 423
L+DMY KCG L A+ VF ++++++VS+ ++IA Y + G EA++LF + +
Sbjct: 332 RFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEE 391
Query: 424 TLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTA 483
+ PD T+ ++L A + E K++H +I + +L + F SNA++ MYAKCG +Q A
Sbjct: 392 GISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEA 451
Query: 484 RRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFS-RMKQNGIEPNESTFVSLLSSCSI 542
F M K+++SWNT+I Y+ + + ++ LF+ +++ P+E T +L +C+
Sbjct: 452 ELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACAS 511
Query: 543 SGLVNEGWELFNS-MKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMP 593
++G E+ M+ Y D + + +VD+ + G L A +++
Sbjct: 512 LSAFDKGREIHGYIMRNGYFSDRHVAN--SLVDMYAKCGALLLAHMLFDDIA 561
>AT1G15510.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:5329111-5331711 FORWARD
Length = 866
Score = 504 bits (1299), Expect = e-143, Method: Compositional matrix adjust.
Identities = 275/735 (37%), Positives = 432/735 (58%), Gaps = 6/735 (0%)
Query: 67 LCEFVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEY-EGIGID 125
L FV G + +A Y+F KM++ + + WNV++ G++ +G F E + YHRM + G+ D
Sbjct: 136 LAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPD 195
Query: 126 NFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFE 185
+TFP V++ CG + GK+VH +++ G + DI V N+LI MY K G V+ A +F+
Sbjct: 196 VYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFD 255
Query: 186 AMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRG 245
MP RD++SWN M++GY G + L F M GL PD +++ S + C + R
Sbjct: 256 RMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRL 315
Query: 246 GKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAI 305
G++IH VI G +DI V SL MY G AE++F+ M K+IV+W MI GY
Sbjct: 316 GRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEY 375
Query: 306 NGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVL 365
N ++ + M +D++ PD IT+ +L +C+ G L G +H AI+ + ++++
Sbjct: 376 NFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIV 435
Query: 366 ETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTL 425
L++MY KC + A +F I KN++SW +IIA N R EAL ++ TL
Sbjct: 436 ANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMK-MTL 494
Query: 426 KPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARR 485
+P+A+T+ + L A A + + K+IHA++ + + + F NA++ MY +CG + TA
Sbjct: 495 QPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWS 554
Query: 486 YFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGL 545
F+S K++ SWN ++ Y+ G G++ ++LF RM ++ + P+E TF+SLL CS S +
Sbjct: 555 QFNSQK-KDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQM 613
Query: 546 VNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLL 605
V +G F+ M+ DY + ++HY C+VDLLGR G L A +FI++MP+ P +WG+LL
Sbjct: 614 VRQGLMYFSKME-DYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALL 672
Query: 606 TASRNNNDIFFAEFAAKHILSHDNDNTGCYVLLANMYAEAGRWEDVEQIKLVMKKKGLAK 665
A R ++ I E +A+HI D + G Y+LL N+YA+ G+W +V +++ +MK+ GL
Sbjct: 673 NACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTV 732
Query: 666 TVDCCTVESKGKSQKFINNNKSHQQAYMIYDVLDIILKKIGEDVYIHSLSKFRPADVIK- 724
C VE KGK F++++K H Q I VL+ +K+ E V + +S+ D +
Sbjct: 733 DAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLEGFYEKMSE-VGLTKISESSSMDETEI 791
Query: 725 KKMKSPQNHSVKLAICFGLISTAIGKPIIIRKNTRICKDCHIAAKKISRVTKREIIVGDS 784
+ + HS + AI FGLI+T G PI + KN +C++CH K IS+ +REI V D+
Sbjct: 792 SRDEIFCGHSERKAIAFGLINTVPGMPIWVTKNLSMCENCHDTVKFISKTVRREISVRDA 851
Query: 785 KIFHHFEDGRCSCGD 799
+ FHHF+DG CSCGD
Sbjct: 852 EHFHHFKDGECSCGD 866
Score = 211 bits (537), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 127/433 (29%), Positives = 218/433 (50%), Gaps = 2/433 (0%)
Query: 98 IRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGL 157
+ G G +E + + M+ + +D F +++ C + EG KV+ +
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMS 125
Query: 158 DRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKE 217
+ + N+ + M+ +FG + A VF M R+L SWN +V GY G +++ +
Sbjct: 126 SLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHR 185
Query: 218 MLGLGE-KPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCG 276
ML +G KPD + L C + GKE+H V+R G ELDI V +LI MY KCG
Sbjct: 186 MLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCG 245
Query: 277 KVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLP 336
V A +F+ M ++I++WNAMI GY NG E M+ ++ PD +T+ +++
Sbjct: 246 DVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVIS 305
Query: 337 SCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVS 396
+C G G+ IH Y I F + + +L MY G + AE +F R+ K++VS
Sbjct: 306 ACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVS 365
Query: 397 WNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYIT 456
W +I+ Y N ++A++ + + ++KPD +T+A++L A A L + ++H
Sbjct: 366 WTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAI 425
Query: 457 KLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQ 516
K L S +N ++ MY+KC + A F ++ KN++SW ++I ++ ++
Sbjct: 426 KARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALI 485
Query: 517 LFSRMKQNGIEPN 529
+MK ++PN
Sbjct: 486 FLRQMKMT-LQPN 497
>AT4G33990.1 | Symbols: EMB2758 | EMB2758 (embryo defective 2758) |
chr4:16290141-16292612 REVERSE
Length = 823
Score = 483 bits (1242), Expect = e-136, Method: Compositional matrix adjust.
Identities = 262/727 (36%), Positives = 413/727 (56%), Gaps = 12/727 (1%)
Query: 79 ALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVID-FYHRMEYEGIGIDNFTFPFVIKACG 137
A + F+ + D Y WN++I G+ G EVI F M G+ D TFP V+KAC
Sbjct: 105 ARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKAC- 163
Query: 138 RLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNC 197
+ I+G K+H +K G D+YV SLI +Y ++ V A +F+ MP+RD+ SWN
Sbjct: 164 --RTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNA 221
Query: 198 MVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNG 257
M++GY G+ ++L + + D ++++S L C+ G IH I++G
Sbjct: 222 MISGYCQSGNAKEALTLSNGLRAM----DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHG 277
Query: 258 LELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLK 317
LE ++ V LID+YA+ G++ ++VF+ M +++++WN++I Y +N L + + +
Sbjct: 278 LESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQ 337
Query: 318 RMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRK-MFLPHLVLETALVDMYGKC 376
M+ + PD +T+I+L S+ G + + + G+ +RK FL + + A+V MY K
Sbjct: 338 EMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKL 397
Query: 377 GQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQ-TLKPDAVTIASI 435
G + A VF + +++SWN II+ Y QNG EA+E+++ + + + + T S+
Sbjct: 398 GLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSV 457
Query: 436 LPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNL 495
LPA ++ + + ++H + K L + F ++ MY KCG L+ A F + N
Sbjct: 458 LPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNS 517
Query: 496 VSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNS 555
V WNT+I + HG G ++ LF M G++P+ TFV+LLS+CS SGLV+EG F
Sbjct: 518 VPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEM 577
Query: 556 MKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTASRNNNDIF 615
M+ DY I ++HYGCMVD+ GR G L+ A +FI+ M L P A IWG+LL+A R + ++
Sbjct: 578 MQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVD 637
Query: 616 FAEFAAKHILSHDNDNTGCYVLLANMYAEAGRWEDVEQIKLVMKKKGLAKTVDCCTVESK 675
+ A++H+ + ++ G +VLL+NMYA AG+WE V++I+ + KGL KT ++E
Sbjct: 638 LGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVD 697
Query: 676 GKSQKFINNNKSHQQAYMIYDVLDIILKKIGEDVYIHSLSKFRPADV-IKKKMKSPQNHS 734
K + F N++H +Y L + K+ Y+ +F DV +K +HS
Sbjct: 698 NKVEVFYTGNQTHPMYEEMYRELTALQAKLKMIGYVPD-HRFVLQDVEDDEKEHILMSHS 756
Query: 735 VKLAICFGLISTAIGKPIIIRKNTRICKDCHIAAKKISRVTKREIIVGDSKIFHHFEDGR 794
+LAI F LI+T I I KN R+C DCH K IS++T+REIIV DS FHHF++G
Sbjct: 757 ERLAIAFALIATPAKTTIRIFKNLRVCGDCHSVTKFISKITEREIIVRDSNRFHHFKNGV 816
Query: 795 CSCGDYW 801
CSCGDYW
Sbjct: 817 CSCGDYW 823
Score = 236 bits (603), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 138/466 (29%), Positives = 254/466 (54%), Gaps = 14/466 (3%)
Query: 145 GKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRV 204
K +H +L+ +++ + L+++Y G V +A F+ + RD+ +WN M++GY
Sbjct: 70 AKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGR 129
Query: 205 IGDGLKSLMCFKE-MLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIM 263
G+ + + CF ML G PD + S L C V G +IHC ++ G D+
Sbjct: 130 AGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRT---VIDGNKIHCLALKFGFMWDVY 186
Query: 264 VQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDN 323
V SLI +Y++ V A +F+EM +++ +WNAMI GY +G+ E+ T ++
Sbjct: 187 VAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRA-- 244
Query: 324 LIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAE 383
D++T+++LL +C++ G G IH Y+I+ L + L+D+Y + G+L+ +
Sbjct: 245 --MDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQ 302
Query: 384 CVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELA 443
VF R+ ++++SWN+II AY N + A+ LF +R ++PD +T+ S+ ++L
Sbjct: 303 KVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLG 362
Query: 444 TVSECKQIHAY-ITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMI 502
+ C+ + + + K + NA+V MYAK G + +AR F+ + +++SWNT+I
Sbjct: 363 DIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTII 422
Query: 503 MAYAIHGFGTISIQLFSRMKQNG-IEPNESTFVSLLSSCSISGLVNEGWELFNS-MKMDY 560
YA +GF + +I++++ M++ G I N+ T+VS+L +CS +G + +G +L +K
Sbjct: 423 SGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGL 482
Query: 561 NIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLT 606
+D + + D+ G+ G L+ A ++P V + W +L+
Sbjct: 483 YLDVFV--VTSLADMYGKCGRLEDALSLFYQIPRVNSVP-WNTLIA 525
Score = 231 bits (589), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 153/483 (31%), Positives = 252/483 (52%), Gaps = 18/483 (3%)
Query: 75 AMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIK 134
A+ NA LF++M D WN +I G+ G +E + + + +D+ T ++
Sbjct: 200 AVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLR----AMDSVTVVSLLS 255
Query: 135 ACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVS 194
AC F G +H IK GL+ +++V N LID+Y +FG + +KVF+ M +RDL+S
Sbjct: 256 ACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLIS 315
Query: 195 WNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVI 254
WN ++ Y + L+++ F+EM +PD L++IS S +R + + +
Sbjct: 316 WNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTL 375
Query: 255 RNGLEL-DIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESF 313
R G L DI + +++ MYAK G VD A VFN + ++++WN +I GYA NG E+
Sbjct: 376 RKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAI 435
Query: 314 TCLKRMQEDNLI-PDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDM 372
M+E+ I + T +++LP+CS+ G L +G +HG ++ + + T+L DM
Sbjct: 436 EMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADM 495
Query: 373 YGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTI 432
YGKCG+L+ A +F +I N V WN +IA + +G E+A+ LF + ++ +KPD +T
Sbjct: 496 YGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITF 555
Query: 433 ASILPAYAELATVSECKQIHAYI-TKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMS 491
++L A + V E + + T ++ + +V MY + G L+TA ++ SMS
Sbjct: 556 VTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMS 615
Query: 492 FKNLVS-WNTMIMAYAIHG---FGTI-SIQLFSRMKQNGIEPNESTFVSLLSSCSISGLV 546
+ S W ++ A +HG G I S LF +EP + LLS+ S
Sbjct: 616 LQPDASIWGALLSACRVHGNVDLGKIASEHLFE------VEPEHVGYHVLLSNMYASAGK 669
Query: 547 NEG 549
EG
Sbjct: 670 WEG 672
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 115/432 (26%), Positives = 213/432 (49%), Gaps = 27/432 (6%)
Query: 243 VRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGG 302
++ K +H +++ + ++ + L+++Y G V A F+ + +++ AWN MI G
Sbjct: 67 LQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISG 126
Query: 303 YAINGHFLESFTCLKR-MQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLP 361
Y G+ E C M L PD T ++L +C T+++G IH A++ F+
Sbjct: 127 YGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACR---TVIDGNKIHCLALKFGFMW 183
Query: 362 HLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLR 421
+ + +L+ +Y + + A +F + ++M SWNA+I+ Y Q+G +EAL L + LR
Sbjct: 184 DVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLR 243
Query: 422 NQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQ 481
D+VT+ S+L A E + IH+Y K L S F SN ++ +YA+ G L+
Sbjct: 244 AM----DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLR 299
Query: 482 TARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCS 541
++ FD M ++L+SWN++I AY ++ +I LF M+ + I+P+ T +SL S S
Sbjct: 300 DCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILS 359
Query: 542 ISGLVN-----EGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVP 596
G + +G+ L ++ +I G +V + + G +D+A+ +P
Sbjct: 360 QLGDIRACRSVQGFTLRKGWFLE-DITIG----NAVVVMYAKLGLVDSARAVFNWLPNTD 414
Query: 597 TARIWGSLLTASRNNNDIFFAEFAAK--HILSHDND---NTGCYVLLANMYAEAGRWEDV 651
W ++++ N FA A + +I+ + + N G +V + ++AG
Sbjct: 415 VIS-WNTIISGYAQNG---FASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQG 470
Query: 652 EQIKLVMKKKGL 663
++ + K GL
Sbjct: 471 MKLHGRLLKNGL 482
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 151/300 (50%), Gaps = 26/300 (8%)
Query: 74 GAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEG-IGIDNFTFPFV 132
G +D+A +F + D WN II G++ G E I+ Y+ ME EG I + T+ V
Sbjct: 398 GLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSV 457
Query: 133 IKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDL 192
+ AC + + +G K+HG+L+K GL D++V SL DMY K G +E A +F +P +
Sbjct: 458 LPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNS 517
Query: 193 VSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQ 252
V WN ++ + G G K++M FKEML G KPD ++ ++ L CS V G Q
Sbjct: 518 VPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEG-----Q 572
Query: 253 VIRNGLELDIMVQTSL------IDMYAKCGKVDYAERVFNEMTCK-NIVAWNAMIGGYAI 305
++ D + SL +DMY + G+++ A + M+ + + W A++ +
Sbjct: 573 WCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRV 632
Query: 306 NGHFLESFTCLKRMQEDNLI---PD----AITMINLLPSCSKFGTLLEGKCI-HGYAIRK 357
+G+ L ++ ++L P+ + + N+ S K+ + E + I HG +RK
Sbjct: 633 HGN-----VDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRK 687
>AT3G23330.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:8347200-8349347 FORWARD
Length = 679
Score = 482 bits (1241), Expect = e-136, Method: Compositional matrix adjust.
Identities = 246/670 (36%), Positives = 403/670 (60%), Gaps = 1/670 (0%)
Query: 132 VIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRD 191
+IK R+ S + K++H + I+ + +I +Y + A +F+ +
Sbjct: 11 LIKNPTRIKSKSQAKQLHAQFIRTQ-SLSHTSASIVISIYTNLKLLHEALLLFKTLKSPP 69
Query: 192 LVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHC 251
+++W ++ + K+L F EM G PD S L C++ +R G+ +H
Sbjct: 70 VLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHG 129
Query: 252 QVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLE 311
++R G++ D+ +L++MYAK +D RVF M K++V++N +I GYA +G + +
Sbjct: 130 FIVRLGMDCDLYTGNALMNMYAKLLGMDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYED 189
Query: 312 SFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVD 371
+ ++ M +L PD+ T+ ++LP S++ +++GK IHGY IRK + + ++LVD
Sbjct: 190 ALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVD 249
Query: 372 MYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVT 431
MY K +++ +E VF R+ ++ +SWN+++A YVQNGR EAL LF + +KP AV
Sbjct: 250 MYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVA 309
Query: 432 IASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMS 491
+S++PA A LAT+ KQ+H Y+ + SN F ++A+V MY+KCG+++ AR+ FD M+
Sbjct: 310 FSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMN 369
Query: 492 FKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWE 551
+ VSW +IM +A+HG G ++ LF MK+ G++PN+ FV++L++CS GLV+E W
Sbjct: 370 VLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWG 429
Query: 552 LFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTASRNN 611
FNSM Y ++ +EHY + DLLGR G L+ A FI +M + PT +W +LL++ +
Sbjct: 430 YFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVH 489
Query: 612 NDIFFAEFAAKHILSHDNDNTGCYVLLANMYAEAGRWEDVEQIKLVMKKKGLAKTVDCCT 671
++ AE A+ I + D++N G YVL+ NMYA GRW+++ +++L M+KKGL K C
Sbjct: 490 KNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSW 549
Query: 672 VESKGKSQKFINNNKSHQQAYMIYDVLDIILKKIGEDVYIHSLSKFRPADVIKKKMKSPQ 731
+E K K+ F++ ++SH I + L +++++ ++ Y+ S + K +
Sbjct: 550 IEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLF 609
Query: 732 NHSVKLAICFGLISTAIGKPIIIRKNTRICKDCHIAAKKISRVTKREIIVGDSKIFHHFE 791
HS +LA+ FG+I+T G I + KN RIC DCH+A K IS++T+REIIV D+ FHHF
Sbjct: 610 GHSERLAVAFGIINTEPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFN 669
Query: 792 DGRCSCGDYW 801
G CSCGDYW
Sbjct: 670 RGNCSCGDYW 679
Score = 274 bits (700), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 154/485 (31%), Positives = 265/485 (54%), Gaps = 9/485 (1%)
Query: 29 RDLLVNPRIRKSNPTKKQMSETPKRGMIKPNSLSLTRS---LCEFVDSGAMDNALYLFEK 85
+ L+ NP KS KQ+ I+ SLS T + + + + + AL LF+
Sbjct: 9 KTLIKNPTRIKSKSQAKQLHAQ----FIRTQSLSHTSASIVISIYTNLKLLHEALLLFKT 64
Query: 86 MNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEG 145
+ P W +IR F+++ LF + + + M G D+ FP V+K+C ++ G
Sbjct: 65 LKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFG 124
Query: 146 KKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVI 205
+ VHG ++++G+D D+Y N+L++MY K ++ +VFE MP +D+VS+N ++ GY
Sbjct: 125 ESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMDSVRRVFEVMPRKDVVSYNTIIAGYAQS 184
Query: 206 GDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQ 265
G +L +EM KPD ++ S L S V GKEIH VIR G++ D+ +
Sbjct: 185 GMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIG 244
Query: 266 TSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLI 325
+SL+DMYAK +++ +ERVF+ + C++ ++WN+++ GY NG + E+ ++M +
Sbjct: 245 SSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVK 304
Query: 326 PDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECV 385
P A+ +++P+C+ TL GK +HGY +R F ++ + +ALVDMY KCG +K A +
Sbjct: 305 PGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKI 364
Query: 386 FGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATV 445
F R+N + VSW AII + +G EA+ LF ++ Q +KP+ V ++L A + + V
Sbjct: 365 FDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLV 424
Query: 446 SECKQIHAYITKL-ELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVS-WNTMIM 503
E +TK+ L+ A+ + + G L+ A + M + S W+T++
Sbjct: 425 DEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLS 484
Query: 504 AYAIH 508
+ ++H
Sbjct: 485 SCSVH 489
>AT4G30700.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:14962617-14964995 REVERSE
Length = 792
Score = 478 bits (1231), Expect = e-135, Method: Compositional matrix adjust.
Identities = 267/747 (35%), Positives = 415/747 (55%), Gaps = 8/747 (1%)
Query: 59 NSLSLTRSLCE-FVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFS-NKGLFQEVIDFYHR 116
N +SL L + D GA+ A +F + +PD +++NV++RGFS N+ + F H
Sbjct: 50 NDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHL 109
Query: 117 MEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGF 176
+ + ++ T+ F I A G+ +HG+ + G D ++ + ++++ MYFKF
Sbjct: 110 RKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWR 169
Query: 177 VEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLG-EKPDRLSMISSLG 235
VE A KVF+ MP +D + WN M++GYR ++S+ F++++ + D +++ L
Sbjct: 170 VEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILP 229
Query: 236 GCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVA 295
+ +R G +IH + G V T I +Y+KCGK+ +F E +IVA
Sbjct: 230 AVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVA 289
Query: 296 WNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAI 355
+NAMI GY NG S + K + + T+++L+P G L+ IHGY +
Sbjct: 290 YNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVS---GHLMLIYAIHGYCL 346
Query: 356 RKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALE 415
+ FL H + TAL +Y K +++ A +F EK++ SWNA+I+ Y QNG E+A+
Sbjct: 347 KSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAIS 406
Query: 416 LFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYA 475
LF ++ P+ VTI IL A A+L +S K +H + + S+ + S A++ MYA
Sbjct: 407 LFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYA 466
Query: 476 KCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVS 535
KCG + ARR FD M+ KN V+WNTMI Y +HG G ++ +F M +GI P TF+
Sbjct: 467 KCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLC 526
Query: 536 LLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLV 595
+L +CS +GLV EG E+FNSM Y + ++HY CMVD+LGR G+L A QFIE M +
Sbjct: 527 VLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIE 586
Query: 596 PTARIWGSLLTASRNNNDIFFAEFAAKHILSHDNDNTGCYVLLANMYAEAGRWEDVEQIK 655
P + +W +LL A R + D A ++ + D DN G +VLL+N+++ + ++
Sbjct: 587 PGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVR 646
Query: 656 LVMKKKGLAKTVDCCTVESKGKSQKFINNNKSHQQAYMIYDVLDIILKKIGEDVYIHSLS 715
KK+ LAK +E F + ++SH Q IY+ L+ + K+ E Y +
Sbjct: 647 QTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGY-QPET 705
Query: 716 KFRPADVIKKKMK-SPQNHSVKLAICFGLISTAIGKPIIIRKNTRICKDCHIAAKKISRV 774
+ DV +++ + + HS +LAI FGLI+T G I I KN R+C DCH K IS++
Sbjct: 706 ELALHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTVTKLISKI 765
Query: 775 TKREIIVGDSKIFHHFEDGRCSCGDYW 801
T+R I+V D+ FHHF+DG CSCGDYW
Sbjct: 766 TERVIVVRDANRFHHFKDGVCSCGDYW 792
Score = 133 bits (335), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 148/292 (50%), Gaps = 2/292 (0%)
Query: 248 EIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAING 307
+ H Q+I +G DI + T L + G + YA +F + ++ +N ++ G+++N
Sbjct: 38 QTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNE 97
Query: 308 HFLESFTCLKRMQED-NLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLE 366
S + +++ +L P++ T + + S F G+ IHG A+ L+L
Sbjct: 98 SPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLG 157
Query: 367 TALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQT-L 425
+ +V MY K +++ A VF R+ EK+ + WN +I+ Y +N E++++F L N++
Sbjct: 158 SNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCT 217
Query: 426 KPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARR 485
+ D T+ ILPA AEL + QIH+ TK S+ + + +Y+KCG ++
Sbjct: 218 RLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSA 277
Query: 486 YFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLL 537
F ++V++N MI Y +G +S+ LF + +G ST VSL+
Sbjct: 278 LFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLV 329
>AT5G16860.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:5543834-5546386 FORWARD
Length = 850
Score = 474 bits (1220), Expect = e-134, Method: Compositional matrix adjust.
Identities = 269/795 (33%), Positives = 435/795 (54%), Gaps = 55/795 (6%)
Query: 60 SLSLTRSLCE-FVDSGAMDNALYLFEKMNQPDT--YIWNVIIRGFSNKGLFQEVIDFYHR 116
+L+LT L ++ G + +A+ L + D Y WN +IR + + G + + +
Sbjct: 58 TLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGL 117
Query: 117 MEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGF 176
M DN+TFPFV KACG + S G+ H + G +++V N+L+ MY +
Sbjct: 118 MHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRS 177
Query: 177 VEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLG-LGEKPDRLSMISSLG 235
+ A KVF+ M + D+VSWN ++ Y +G +L F M G +PD +++++ L
Sbjct: 178 LSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLP 237
Query: 236 GCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVA 295
C+ GK++HC + + + ++ V L+DMYAKCG +D A VF+ M+ K++V+
Sbjct: 238 PCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVS 297
Query: 296 WNAMIGGYAINGHFLESFTCLKRMQED--------------------------------- 322
WNAM+ GY+ G F ++ ++MQE+
Sbjct: 298 WNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQML 357
Query: 323 --NLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFL--------PHLVLETALVDM 372
+ P+ +T+I++L C+ G L+ GK IH YAI+ ++V+ L+DM
Sbjct: 358 SSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQ-LIDM 416
Query: 373 YGKCGQLKFAECVFGRIN--EKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQ--TLKPD 428
Y KC ++ A +F ++ E+++V+W +I Y Q+G +ALEL + + +P+
Sbjct: 417 YAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPN 476
Query: 429 AVTIASILPAYAELATVSECKQIHAYITKLELSS-NTFTSNAIVYMYAKCGDLQTARRYF 487
A TI+ L A A LA + KQIHAY + + ++ F SN ++ MYAKCG + AR F
Sbjct: 477 AFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVF 536
Query: 488 DSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVN 547
D+M KN V+W +++ Y +HG+G ++ +F M++ G + + T + +L +CS SG+++
Sbjct: 537 DNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMID 596
Query: 548 EGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTA 607
+G E FN MK + + G EHY C+VDLLGR G L+AA + IEEMP+ P +W + L+
Sbjct: 597 QGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSC 656
Query: 608 SRNNNDIFFAEFAAKHILSHDNDNTGCYVLLANMYAEAGRWEDVEQIKLVMKKKGLAKTV 667
R + + E+AA+ I +++ G Y LL+N+YA AGRW+DV +I+ +M+ KG+ K
Sbjct: 657 CRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRP 716
Query: 668 DCCTVESKGKSQKFINNNKSHQQAYMIYDVLDIILKKIGEDVYIHSLSKFRPADV-IKKK 726
C VE + F +K+H A IY VL +++I + Y+ + F DV ++K
Sbjct: 717 GCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLLDHMQRIKDIGYVPE-TGFALHDVDDEEK 775
Query: 727 MKSPQNHSVKLAICFGLISTAIGKPIIIRKNTRICKDCHIAAKKISRVTKREIIVGDSKI 786
HS KLA+ +G+++T G I I KN R+C DCH A +SR+ +II+ DS
Sbjct: 776 DDLLFEHSEKLALAYGILTTPQGAAIRITKNLRVCGDCHTAFTYMSRIIDHDIILRDSSR 835
Query: 787 FHHFEDGRCSCGDYW 801
FHHF++G CSC YW
Sbjct: 836 FHHFKNGSCSCKGYW 850
Score = 204 bits (519), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 148/529 (27%), Positives = 246/529 (46%), Gaps = 55/529 (10%)
Query: 128 TFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAM 187
T PF+ K + +S + K +H KL+ G+ + + + LI Y G + A +
Sbjct: 31 TPPFIHKC--KTISQV--KLIHQKLLSFGI-LTLNLTSHLISTYISVGCLSHAVSLLRRF 85
Query: 188 PLRD--LVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRG 245
P D + WN ++ Y G K L F M L PD + C VR
Sbjct: 86 PPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRC 145
Query: 246 GKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAI 305
G+ H + G ++ V +L+ MY++C + A +VF+EM+ ++V+WN++I YA
Sbjct: 146 GESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAK 205
Query: 306 NGHFLESFTCLKRM-QEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLV 364
G + RM E PD IT++N+LP C+ GT GK +H +A+ + ++
Sbjct: 206 LGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMF 265
Query: 365 LETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQT 424
+ LVDMY KCG + A VF ++ K++VSWNA++A Y Q GR E+A+ LF ++ +
Sbjct: 266 VGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEK 325
Query: 425 LKPDAVTIASILPAYAE--------------------------LATVSEC---------K 449
+K D VT ++ + YA+ ++ +S C K
Sbjct: 326 IKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGK 385
Query: 450 QIHAYITK--LELSSN-----TFTSNAIVYMYAKCGDLQTARRYFDSMSFK--NLVSWNT 500
+IH Y K ++L N N ++ MYAKC + TAR FDS+S K ++V+W
Sbjct: 386 EIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTV 445
Query: 501 MIMAYAIHGFGTISIQLFSRMKQNGIE--PNESTFVSLLSSCSISGLVNEGWELFNSMKM 558
MI Y+ HG +++L S M + + PN T L +C+ + G ++
Sbjct: 446 MIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALR 505
Query: 559 DYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTA 607
+ + C++D+ + G++ A+ + M + W SL+T
Sbjct: 506 NQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNM-MAKNEVTWTSLMTG 553
>AT3G57430.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:21255731-21258403 REVERSE
Length = 890
Score = 472 bits (1214), Expect = e-133, Method: Compositional matrix adjust.
Identities = 254/741 (34%), Positives = 432/741 (58%), Gaps = 19/741 (2%)
Query: 79 ALY-LFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACG 137
A+Y +F+++++ + WN +I + ++ ++ + M E + +FT V+ AC
Sbjct: 151 AVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACS 210
Query: 138 RLL---SFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVS 194
L + GK+VH ++ G + + ++ N+L+ MY K G + ++ + + RDLV+
Sbjct: 211 NLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVT 269
Query: 195 WNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVI 254
WN +++ L++L +EM+ G +PD ++ S L CS +R GKE+H +
Sbjct: 270 WNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYAL 329
Query: 255 RNG-LELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESF 313
+NG L+ + V ++L+DMY C +V RVF+ M + I WNAMI GY+ N H E+
Sbjct: 330 KNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEAL 389
Query: 314 TCLKRMQED-NLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDM 372
M+E L+ ++ TM ++P+C + G + IHG+ +++ ++ L+DM
Sbjct: 390 LLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDM 449
Query: 373 YGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQ--------- 423
Y + G++ A +FG++ ++++V+WN +I YV + +E+AL L H ++N
Sbjct: 450 YSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGAS 509
Query: 424 --TLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQ 481
+LKP+++T+ +ILP+ A L+ +++ K+IHAY K L+++ +A+V MYAKCG LQ
Sbjct: 510 RVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQ 569
Query: 482 TARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCS 541
+R+ FD + KN+++WN +IMAY +HG G +I L M G++PNE TF+S+ ++CS
Sbjct: 570 MSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACS 629
Query: 542 ISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPL-VPTARI 600
SG+V+EG +F MK DY ++ +HY C+VDLLGR G + A Q + MP A
Sbjct: 630 HSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGA 689
Query: 601 WGSLLTASRNNNDIFFAEFAAKHILSHDNDNTGCYVLLANMYAEAGRWEDVEQIKLVMKK 660
W SLL ASR +N++ E AA++++ + + YVLLAN+Y+ AG W+ +++ MK+
Sbjct: 690 WSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKE 749
Query: 661 KGLAKTVDCCTVESKGKSQKFINNNKSHQQAYMIYDVLDIILKKIGEDVYIHSLSKFRPA 720
+G+ K C +E + KF+ + SH Q+ + L+ + +++ ++ Y+ S
Sbjct: 750 QGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHN 809
Query: 721 DVIKKKMKSPQNHSVKLAICFGLISTAIGKPIIIRKNTRICKDCHIAAKKISRVTKREII 780
+K HS KLAI FG+++T+ G I + KN R+C DCH+A K IS++ REII
Sbjct: 810 VEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREII 869
Query: 781 VGDSKIFHHFEDGRCSCGDYW 801
+ D + FH F++G CSCGDYW
Sbjct: 870 LRDVRRFHRFKNGTCSCGDYW 890
Score = 241 bits (616), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 157/511 (30%), Positives = 264/511 (51%), Gaps = 39/511 (7%)
Query: 74 GAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVI 133
G + ++ L D WN ++ E +++ M EG+ D FT V+
Sbjct: 250 GKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVL 309
Query: 134 KACGRLLSFIEGKKVHGKLIKIG-LDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDL 192
AC L GK++H +K G LD + +V ++L+DMY V +VF+ M R +
Sbjct: 310 PACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKI 369
Query: 193 VSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGG-----K 247
WN M+ GY ++L+ F +G+ E L+ +++ G + CVR G +
Sbjct: 370 GLWNAMIAGYSQNEHDKEALLLF---IGMEESAGLLANSTTMAGV-VPACVRSGAFSRKE 425
Query: 248 EIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAING 307
IH V++ GL+ D VQ +L+DMY++ GK+D A R+F +M +++V WN MI GY +
Sbjct: 426 AIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSE 485
Query: 308 HFLESFTCLKRMQ-----------EDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIR 356
H ++ L +MQ +L P++IT++ +LPSC+ L +GK IH YAI+
Sbjct: 486 HHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIK 545
Query: 357 KMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALEL 416
+ + +ALVDMY KCG L+ + VF +I +KN+++WN II AY +G +EA++L
Sbjct: 546 NNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDL 605
Query: 417 FHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITK----LELSSNTFTSNAIVY 472
+ Q +KP+ VT S+ A + V E +I Y+ K +E SS+ + +V
Sbjct: 606 LRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIF-YVMKPDYGVEPSSDHYA--CVVD 662
Query: 473 MYAKCGDLQTARRYFDSM--SFKNLVSWNTMIMAYAIHG---FGTISIQLFSRMKQNGIE 527
+ + G ++ A + + M F +W++++ A IH G I+ Q ++ E
Sbjct: 663 LLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQL-----E 717
Query: 528 PNESTFVSLLSSC-SISGLVNEGWELFNSMK 557
PN ++ LL++ S +GL ++ E+ +MK
Sbjct: 718 PNVASHYVLLANIYSSAGLWDKATEVRRNMK 748
Score = 229 bits (584), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 145/517 (28%), Positives = 257/517 (49%), Gaps = 19/517 (3%)
Query: 94 WNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLI 153
W ++R L +E + Y M GI DN+ FP ++KA L GK++H +
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 154 KIGLDRD-IYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSL 212
K G D + V N+L+++Y K G KVF+ + R+ VSWN +++ +L
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 213 MCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRG---GKEIHCQVIRNGLELDIMVQTSLI 269
F+ ML +P +++S + CS G GK++H +R G EL+ + +L+
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLV 243
Query: 270 DMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAI 329
MY K GK+ ++ + +++V WN ++ N LE+ L+ M + + PD
Sbjct: 244 AMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEF 303
Query: 330 TMINLLPSCSKFGTLLEGKCIHGYAIRKMFL-PHLVLETALVDMYGKCGQLKFAECVFGR 388
T+ ++LP+CS L GK +H YA++ L + + +ALVDMY C Q+ VF
Sbjct: 304 TISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDG 363
Query: 389 INEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQT-LKPDAVTIASILPAYAELATVSE 447
+ ++ + WNA+IA Y QN ++EAL LF + L ++ T+A ++PA S
Sbjct: 364 MFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSR 423
Query: 448 CKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAI 507
+ IH ++ K L + F N ++ MY++ G + A R F M ++LV+WNTMI Y
Sbjct: 424 KEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVF 483
Query: 508 HGFGTISIQLFSRMK-----------QNGIEPNESTFVSLLSSCSISGLVNEGWELFNSM 556
++ L +M+ + ++PN T +++L SC+ + +G E+ ++
Sbjct: 484 SEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEI-HAY 542
Query: 557 KMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMP 593
+ N+ + +VD+ + G L +++ +++P
Sbjct: 543 AIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIP 579
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 117/410 (28%), Positives = 217/410 (52%), Gaps = 21/410 (5%)
Query: 210 KSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELD-IMVQTSL 268
++++ + +M+ LG KPD + + L + + GK+IH V + G +D + V +L
Sbjct: 80 EAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTL 139
Query: 269 IDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHF---LESFTCLKRMQEDNLI 325
+++Y KCG +VF+ ++ +N V+WN++I + LE+F C M ++N+
Sbjct: 140 VNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRC---MLDENVE 196
Query: 326 PDAITMINLLPSCSKFGT---LLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFA 382
P + T+++++ +CS L+ GK +H Y +RK L ++ T LV MYGK G+L +
Sbjct: 197 PSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINT-LVAMYGKLGKLASS 255
Query: 383 ECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAEL 442
+ + G +++V+WN ++++ QN + EALE + + ++PD TI+S+LPA + L
Sbjct: 256 KVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHL 315
Query: 443 ATVSECKQIHAYITK-LELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTM 501
+ K++HAY K L N+F +A+V MY C + + RR FD M + + WN M
Sbjct: 316 EMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAM 375
Query: 502 IMAYAIHGFGTISIQLFSRMKQN-GIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDY 560
I Y+ + ++ LF M+++ G+ N +T ++ +C SG + E + +
Sbjct: 376 IAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRK-EAIHGFVVKR 434
Query: 561 NIDYGIEHYGCMVDLLGRTGNLDAAKQF---IEEMPLVPTARIWGSLLTA 607
+D ++D+ R G +D A + +E+ LV W +++T
Sbjct: 435 GLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLV----TWNTMITG 480
>AT3G12770.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4056900-4059193 REVERSE
Length = 719
Score = 456 bits (1174), Expect = e-128, Method: Compositional matrix adjust.
Identities = 233/689 (33%), Positives = 394/689 (57%), Gaps = 21/689 (3%)
Query: 121 GIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVA 180
GI D+F + A + + K++H +L+ +GL ++ LI FG + A
Sbjct: 17 GIHSDSFYASLIDSATHK----AQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFA 72
Query: 181 EKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIG 240
+VF+ +P + WN ++ GY +L+ + M PD + L CS
Sbjct: 73 RQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGL 132
Query: 241 CCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTC--KNIVAWNA 298
++ G+ +H QV R G + D+ VQ LI +YAKC ++ A VF + + IV+W A
Sbjct: 133 SHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTA 192
Query: 299 MIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKM 358
++ YA NG +E+ +M++ ++ PD + ++++L + + L +G+ IH ++
Sbjct: 193 IVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMG 252
Query: 359 FLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFH 418
L +L MY KCGQ+ A+ +F ++ N++ WNA+I+ Y +NG EA+++FH
Sbjct: 253 LEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFH 312
Query: 419 CLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCG 478
+ N+ ++PD ++I S + A A++ ++ + + ++ Y+ + + + F S+A++ M+AKCG
Sbjct: 313 EMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCG 372
Query: 479 DLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLS 538
++ AR FD +++V W+ MI+ Y +HG +I L+ M++ G+ PN+ TF+ LL
Sbjct: 373 SVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLM 432
Query: 539 SCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTA 598
+C+ SG+V EGW FN M D+ I+ +HY C++DLLGR G+LD A + I+ MP+ P
Sbjct: 433 ACNHSGMVREGWWFFNRMA-DHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGV 491
Query: 599 RIWGSLLTASRNNNDIFFAEFAAKHILSHDNDNTGCYVLLANMYAEAGRWEDVEQIKLVM 658
+WG+LL+A + + + E+AA+ + S D NTG YV L+N+YA A W+ V ++++ M
Sbjct: 492 TVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRM 551
Query: 659 KKKGLAKTVDCCTVESKGKSQKFINNNKSHQQAYMIYDVLDIILKKIGE-------DVYI 711
K+KGL K V C VE +G+ + F +KSH + I ++ I ++ E D +
Sbjct: 552 KEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASL 611
Query: 712 HSLSKFRPADVIKKKMKSPQNHSVKLAICFGLISTAIGKPIIIRKNTRICKDCHIAAKKI 771
H L+ ++ ++ +HS ++AI +GLIST G P+ I KN R C +CH A K I
Sbjct: 612 HDLND-------EEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLI 664
Query: 772 SRVTKREIIVGDSKIFHHFEDGRCSCGDY 800
S++ REI+V D+ FHHF+DG CSCGDY
Sbjct: 665 SKLVDREIVVRDTNRFHHFKDGVCSCGDY 693
Score = 250 bits (639), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 133/438 (30%), Positives = 235/438 (53%), Gaps = 3/438 (0%)
Query: 74 GAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVI 133
G + A +F+ + +P + WN IIRG+S FQ+ + Y M+ + D+FTFP ++
Sbjct: 67 GDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLL 126
Query: 134 KACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPL--RD 191
KAC L G+ VH ++ ++G D D++V N LI +Y K + A VFE +PL R
Sbjct: 127 KACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERT 186
Query: 192 LVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHC 251
+VSW +V+ Y G+ +++L F +M + KPD ++++S L + ++ G+ IH
Sbjct: 187 IVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHA 246
Query: 252 QVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLE 311
V++ GLE++ + SL MYAKCG+V A+ +F++M N++ WNAMI GYA NG+ E
Sbjct: 247 SVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYARE 306
Query: 312 SFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVD 371
+ M ++ PD I++ + + +C++ G+L + + ++ Y R + + + +AL+D
Sbjct: 307 AIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALID 366
Query: 372 MYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVT 431
M+ KCG ++ A VF R ++++V W+A+I Y +GR EA+ L+ + + P+ VT
Sbjct: 367 MFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVT 426
Query: 432 IASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMS 491
+L A V E + +++ ++ + + G L A M
Sbjct: 427 FLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMP 486
Query: 492 FKNLVS-WNTMIMAYAIH 508
+ V+ W ++ A H
Sbjct: 487 VQPGVTVWGALLSACKKH 504
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 113/234 (48%), Gaps = 1/234 (0%)
Query: 70 FVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTF 129
+ G + A LF+KM P+ +WN +I G++ G +E ID +H M + + D +
Sbjct: 267 YAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISI 326
Query: 130 PFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPL 189
I AC ++ S + + ++ + + D+++ ++LIDM+ K G VE A VF+
Sbjct: 327 TSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLD 386
Query: 190 RDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEI 249
RD+V W+ M+ GY + G +++ ++ M G P+ ++ + L C+ VR G
Sbjct: 387 RDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWF 446
Query: 250 HCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCK-NIVAWNAMIGG 302
++ + + +ID+ + G +D A V M + + W A++
Sbjct: 447 FNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSA 500
>AT4G13650.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:7939611-7942898 REVERSE
Length = 1064
Score = 456 bits (1172), Expect = e-128, Method: Compositional matrix adjust.
Identities = 247/730 (33%), Positives = 402/730 (55%), Gaps = 4/730 (0%)
Query: 74 GAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVI 133
G + +A ++F M+Q D +N +I G S G ++ ++ + RM +G+ D+ T ++
Sbjct: 337 GNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLV 396
Query: 134 KACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLV 193
AC + G+++H K+G + + +L+++Y K +E A F + ++V
Sbjct: 397 VACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVV 456
Query: 194 SWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQV 253
WN M+ Y ++ D S F++M P++ + S L C + G++IH Q+
Sbjct: 457 LWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQI 516
Query: 254 IRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESF 313
I+ +L+ V + LIDMYAK GK+D A + K++V+W MI GY ++
Sbjct: 517 IKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKAL 576
Query: 314 TCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMY 373
T ++M + + D + + N + +C+ L EG+ IH A F L + ALV +Y
Sbjct: 577 TTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLY 636
Query: 374 GKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIA 433
+CG+++ + F + + ++WNA+++ + Q+G NEEAL +F + + + + T
Sbjct: 637 SRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFG 696
Query: 434 SILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFK 493
S + A +E A + + KQ+HA ITK S T NA++ MYAKCG + A + F +S K
Sbjct: 697 SAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTK 756
Query: 494 NLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELF 553
N VSWN +I AY+ HGFG+ ++ F +M + + PN T V +LS+CS GLV++G F
Sbjct: 757 NEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYF 816
Query: 554 NSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTASRNNND 613
SM +Y + EHY C+VD+L R G L AK+FI+EMP+ P A +W +LL+A + +
Sbjct: 817 ESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKN 876
Query: 614 IFFAEFAAKHILSHDNDNTGCYVLLANMYAEAGRWEDVEQIKLVMKKKGLAKTVDCCTVE 673
+ EFAA H+L + +++ YVLL+N+YA + +W+ + + MK+KG+ K +E
Sbjct: 877 MEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIE 936
Query: 674 SKGKSQKFINNNKSHQQAYMIYDVLDIILKKIGEDVYIHSLSKFRPADVIKKKMKSPQ-- 731
K F +++H A I++ + K+ E Y+ F + ++ + K P
Sbjct: 937 VKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDC--FSLLNELQHEQKDPIIF 994
Query: 732 NHSVKLAICFGLISTAIGKPIIIRKNTRICKDCHIAAKKISRVTKREIIVGDSKIFHHFE 791
HS KLAI FGL+S PI + KN R+C DCH K +S+V+ REIIV D+ FHHFE
Sbjct: 995 IHSEKLAISFGLLSLPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFE 1054
Query: 792 DGRCSCGDYW 801
G CSC DYW
Sbjct: 1055 GGACSCKDYW 1064
Score = 259 bits (662), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 149/519 (28%), Positives = 271/519 (52%), Gaps = 2/519 (0%)
Query: 73 SGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFV 132
+G +D A +F+ + D W +I G S E I + M GI + F V
Sbjct: 235 NGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSV 294
Query: 133 IKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDL 192
+ AC ++ S G+++HG ++K+G D YVCN+L+ +YF G + AE +F M RD
Sbjct: 295 LSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDA 354
Query: 193 VSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQ 252
V++N ++NG G G K++ FK M G +PD ++ S + CS + G+++H
Sbjct: 355 VTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAY 414
Query: 253 VIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLES 312
+ G + ++ +L+++YAKC ++ A F E +N+V WN M+ Y + S
Sbjct: 415 TTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNS 474
Query: 313 FTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDM 372
F ++MQ + ++P+ T ++L +C + G L G+ IH I+ F + + + L+DM
Sbjct: 475 FRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDM 534
Query: 373 YGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTI 432
Y K G+L A + R K++VSW +IA Y Q +++AL F + ++ ++ D V +
Sbjct: 535 YAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGL 594
Query: 433 ASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSF 492
+ + A A L + E +QIHA SS+ NA+V +Y++CG ++ + F+
Sbjct: 595 TNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEA 654
Query: 493 KNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWEL 552
+ ++WN ++ + G ++++F RM + GI+ N TF S + + S + + +G ++
Sbjct: 655 GDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQV 714
Query: 553 FNSMKMDYNIDYGIEHYGCMVDLLGRTGNL-DAAKQFIE 590
+++ D E ++ + + G++ DA KQF+E
Sbjct: 715 -HAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLE 752
Score = 218 bits (555), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 146/484 (30%), Positives = 251/484 (51%), Gaps = 29/484 (5%)
Query: 117 MEYEGIGIDNFTFPFVIKACGRLL-SFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFG 175
+E GI ++ T ++++ C + S EG+K+H +++K+GLD + + L D Y G
Sbjct: 75 VENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKG 134
Query: 176 FVEVAEKVFEAMPLRDLVSWNCMVN---GYRVIGD--GLKSLMCFKEMLGLGEKPDRLSM 230
+ A KVF+ MP R + +WN M+ +IG+ GL F M+ P+ +
Sbjct: 135 DLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGL-----FVRMVSENVTPNEGTF 189
Query: 231 ISSLGGCSIGCCVRGG-------KEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAER 283
L C RGG ++IH +++ GL +V LID+Y++ G VD A R
Sbjct: 190 SGVLEAC------RGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARR 243
Query: 284 VFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGT 343
VF+ + K+ +W AMI G + N E+ M ++P ++L +C K +
Sbjct: 244 VFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIES 303
Query: 344 LLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAA 403
L G+ +HG ++ F + ALV +Y G L AE +F +++++ V++N +I
Sbjct: 304 LEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLING 363
Query: 404 YVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSN 463
Q G E+A+ELF + L+PD+ T+AS++ A + T+ +Q+HAY TKL +SN
Sbjct: 364 LSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASN 423
Query: 464 TFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQ 523
A++ +YAKC D++TA YF +N+V WN M++AY + S ++F +M+
Sbjct: 424 NKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQI 483
Query: 524 NGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGC--MVDLLGRTGN 581
I PN+ T+ S+L +C G + G ++ + + ++ + Y C ++D+ + G
Sbjct: 484 EEIVPNQYTYPSILKTCIRLGDLELGEQIHSQI---IKTNFQLNAYVCSVLIDMYAKLGK 540
Query: 582 LDAA 585
LD A
Sbjct: 541 LDTA 544
>AT3G22690.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:8020757-8024534 REVERSE
Length = 978
Score = 452 bits (1163), Expect = e-127, Method: Compositional matrix adjust.
Identities = 262/767 (34%), Positives = 423/767 (55%), Gaps = 34/767 (4%)
Query: 68 CEFVDSGAMDNALYLFEKMNQPDT-YIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDN 126
CE ++ A +FE T +++N +IRG+++ GL E I + RM GI D
Sbjct: 75 CELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDK 134
Query: 127 FTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEA 186
+TFPF + AC + + G ++HG ++K+G +D++V NSL+ Y + G ++ A KVF+
Sbjct: 135 YTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDE 194
Query: 187 MPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGE-KPDRLSMISSLGGCSIGCCVRG 245
M R++VSW M+ GY ++ F M+ E P+ ++M+ + C+ +
Sbjct: 195 MSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLET 254
Query: 246 GKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAI 305
G++++ + +G+E++ ++ ++L+DMY KC +D A+R+F+E N+ NAM Y
Sbjct: 255 GEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVR 314
Query: 306 NGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVL 365
G E+ M + + PD I+M++ + SCS+ +L GK HGY +R F +
Sbjct: 315 QGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNI 374
Query: 366 ETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRN--------------- 410
AL+DMY KC + A +F R++ K +V+WN+I+A YV+NG
Sbjct: 375 CNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNI 434
Query: 411 ----------------EEALELFHCLRNQT-LKPDAVTIASILPAYAELATVSECKQIHA 453
EEA+E+F +++Q + D VT+ SI A L + K I+
Sbjct: 435 VSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYY 494
Query: 454 YITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTI 513
YI K + + +V M+++CGD ++A F+S++ +++ +W I A A+ G
Sbjct: 495 YIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAER 554
Query: 514 SIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMV 573
+I+LF M + G++P+ FV L++CS GLV +G E+F SM + + HYGCMV
Sbjct: 555 AIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMV 614
Query: 574 DLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTASRNNNDIFFAEFAAKHILSHDNDNTG 633
DLLGR G L+ A Q IE+MP+ P IW SLL A R ++ A +AA+ I + TG
Sbjct: 615 DLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTG 674
Query: 634 CYVLLANMYAEAGRWEDVEQIKLVMKKKGLAKTVDCCTVESKGKSQKFINNNKSHQQAYM 693
YVLL+N+YA AGRW D+ +++L MK+KGL K +++ +GK+ +F + ++SH +
Sbjct: 675 SYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPN 734
Query: 694 IYDVLDIILKKIGEDVYIHSLSKFRPADVIKKKMKSPQNHSVKLAICFGLISTAIGKPII 753
I +LD + ++ ++ LS K+K+ HS KLA+ +GLIS+ G I
Sbjct: 735 IEAMLDEVSQRASHLGHVPDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIR 794
Query: 754 IRKNTRICKDCHIAAKKISRVTKREIIVGDSKIFHHFEDGRCSCGDY 800
I KN R+C DCH AK S+V REII+ D+ FH+ G+CSCGD+
Sbjct: 795 IVKNLRVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGKCSCGDF 841
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 108/408 (26%), Positives = 194/408 (47%), Gaps = 38/408 (9%)
Query: 56 IKPNSLSLTRSLCEFVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYH 115
I+ N L ++ + ++ A+D A LF++ + + N + + +GL +E + ++
Sbjct: 267 IEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFN 326
Query: 116 RMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFG 175
M G+ D + I +C +L + + GK HG +++ G + +CN+LIDMY K
Sbjct: 327 LMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCH 386
Query: 176 FVEVAEKVFEAMPLRDLVSWNCMVNGY------------------------RVIGDGLKS 211
+ A ++F+ M + +V+WN +V GY I GL
Sbjct: 387 RQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQ 446
Query: 212 LMCFKEMLGL--------GEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIM 263
F+E + + G D ++M+S C + K I+ + +NG++LD+
Sbjct: 447 GSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVR 506
Query: 264 VQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDN 323
+ T+L+DM+++CG + A +FN +T +++ AW A IG A+ G+ + M E
Sbjct: 507 LGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQG 566
Query: 324 LIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKM--FLPHLVLETALVDMYGKCGQLKF 381
L PD + + L +CS G + +GK I Y++ K+ P V +VD+ G+ G L+
Sbjct: 567 LKPDGVAFVGALTACSHGGLVQQGKEIF-YSMLKLHGVSPEDVHYGCMVDLLGRAGLLEE 625
Query: 382 A-ECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPD 428
A + + E N V WN+++AA G E A + + Q L P+
Sbjct: 626 AVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMA--AYAAEKIQVLAPE 671
>AT1G18485.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:6363172-6366084 FORWARD
Length = 970
Score = 447 bits (1149), Expect = e-125, Method: Compositional matrix adjust.
Identities = 249/742 (33%), Positives = 420/742 (56%), Gaps = 21/742 (2%)
Query: 74 GAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQE-VIDFYHRMEYEGIGI---DNFTF 129
G + +AL LF+ M + + WN +IR FS+ G +E + ME G G D T
Sbjct: 236 GFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATL 295
Query: 130 PFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPL 189
V+ C R GK VHG +K+ LD+++ + N+L+DMY K G + A+ +F+
Sbjct: 296 VTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNN 355
Query: 190 RDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGE--KPDRLSMISSLGGCSIGCCVRGGK 247
+++VSWN MV G+ GD + ++ML GE K D +++++++ C + K
Sbjct: 356 KNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLK 415
Query: 248 EIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAING 307
E+HC ++ + +V + + YAKCG + YA+RVF+ + K + +WNA+IGG+A +
Sbjct: 416 ELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSN 475
Query: 308 HFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLET 367
S +M+ L+PD+ T+ +LL +CSK +L GK +HG+ IR L +
Sbjct: 476 DPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYL 535
Query: 368 ALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKP 427
+++ +Y CG+L + +F + +K++VSWN +I Y+QNG + AL +F + ++
Sbjct: 536 SVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQL 595
Query: 428 DAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYF 487
+++ + A + L ++ ++ HAY K L + F + +++ MYAK G + + + F
Sbjct: 596 CGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVF 655
Query: 488 DSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVN 547
+ + K+ SWN MIM Y IHG +I+LF M++ G P++ TF+ +L++C+ SGL++
Sbjct: 656 NGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIH 715
Query: 548 EGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFI-EEMPLVPTARIWGSLLT 606
EG + MK + + ++HY C++D+LGR G LD A + + EEM IW SLL+
Sbjct: 716 EGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLS 775
Query: 607 ASRNNNDIFFAEFAAKHILSHDNDNTGCYVLLANMYAEAGRWEDVEQIKLVMKKKGLAKT 666
+ R + ++ E A + + + YVLL+N+YA G+WEDV +++ M + L K
Sbjct: 776 SCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKD 835
Query: 667 VDCCTVESKGKSQKFINNNK---SHQQAYMIYDVLDIILKKIG---EDVYI-HSLSKFRP 719
C +E K F+ + ++ ++ +L++ + K+G + + + H LS+
Sbjct: 836 AGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTMSVQHDLSE--- 892
Query: 720 ADVIKKKMKSPQNHSVKLAICFGLISTAIGKPIIIRKNTRICKDCHIAAKKISRVTKREI 779
++K++ + HS KLA+ +GLI T+ G I + KN RIC DCH AAK IS+V +REI
Sbjct: 893 ----EEKIEQLRGHSEKLALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKVMEREI 948
Query: 780 IVGDSKIFHHFEDGRCSCGDYW 801
+V D+K FHHF++G CSCGDYW
Sbjct: 949 VVRDNKRFHHFKNGVCSCGDYW 970
Score = 269 bits (687), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 150/486 (30%), Positives = 272/486 (55%), Gaps = 7/486 (1%)
Query: 64 TRSLCEFVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVID-FYHRMEYEGI 122
TR + + G+ D++ ++F+ + + + WN +I +S L+ EV++ F + +
Sbjct: 124 TRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDL 183
Query: 123 GIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEK 182
D+FT+P VIKAC + G VHG ++K GL D++V N+L+ Y GFV A +
Sbjct: 184 LPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQ 243
Query: 183 VFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEML---GLGE-KPDRLSMISSLGGCS 238
+F+ MP R+LVSWN M+ + G +S + EM+ G G PD ++++ L C+
Sbjct: 244 LFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCA 303
Query: 239 IGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNA 298
+ GK +H ++ L+ ++++ +L+DMY+KCG + A+ +F KN+V+WN
Sbjct: 304 REREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNT 363
Query: 299 MIGGYAINGHFLESFTCLKRMQE--DNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIR 356
M+GG++ G +F L++M +++ D +T++N +P C L K +H Y+++
Sbjct: 364 MVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLK 423
Query: 357 KMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALEL 416
+ F+ + ++ A V Y KCG L +A+ VF I K + SWNA+I + Q+ +L+
Sbjct: 424 QEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDA 483
Query: 417 FHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAK 476
++ L PD+ T+ S+L A ++L ++ K++H +I + L + F +++ +Y
Sbjct: 484 HLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIH 543
Query: 477 CGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSL 536
CG+L T + FD+M K+LVSWNT+I Y +GF ++ +F +M GI+ + + +
Sbjct: 544 CGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPV 603
Query: 537 LSSCSI 542
+CS+
Sbjct: 604 FGACSL 609
Score = 171 bits (434), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 131/468 (27%), Positives = 232/468 (49%), Gaps = 19/468 (4%)
Query: 59 NSLSLTRSLCEFVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRME 118
N L + + G++ A +F + WN +I G + + +D + +M+
Sbjct: 429 NELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMK 488
Query: 119 YEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVE 178
G+ D+FT ++ AC +L S GK+VHG +I+ L+RD++V S++ +Y G +
Sbjct: 489 ISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELC 548
Query: 179 VAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCS 238
+ +F+AM + LVSWN ++ GY G ++L F++M+ G + +SM+ G CS
Sbjct: 549 TVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACS 608
Query: 239 IGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNA 298
+ +R G+E H +++ LE D + SLIDMYAK G + + +VFN + K+ +WNA
Sbjct: 609 LLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNA 668
Query: 299 MIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEG-KCIHGYAIRK 357
MI GY I+G E+ + MQ PD +T + +L +C+ G + EG + +
Sbjct: 669 MIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSF 728
Query: 358 MFLPHLVLETALVDMYGKCGQL-KFAECVFGRINEKNMVS-WNAIIAA--YVQNGRNEE- 412
P+L ++DM G+ GQL K V ++E+ V W +++++ QN E
Sbjct: 729 GLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEK 788
Query: 413 -ALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIV 471
A +LF + KP+ + S L YA L + +++ + ++ L + S +
Sbjct: 789 VAAKLFEL---EPEKPENYVLLSNL--YAGLGKWEDVRKVRQRMNEMSLRKDAGCS--WI 841
Query: 472 YMYAKCGDLQTARRYFDSMSFKNLVS-WNTMIMAYAIHGF--GTISIQ 516
+ K R+ D F+ + S W+ + M + G+ T+S+Q
Sbjct: 842 ELNRKVFSFVVGERFLD--GFEEIKSLWSILEMKISKMGYRPDTMSVQ 887
>AT3G03580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:860695-863343 REVERSE
Length = 882
Score = 445 bits (1144), Expect = e-125, Method: Compositional matrix adjust.
Identities = 255/731 (34%), Positives = 403/731 (55%), Gaps = 6/731 (0%)
Query: 74 GAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVI 133
G + A +F++M D WN +I G+S+ G ++E ++ YH ++ I D+FT V+
Sbjct: 155 GLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVL 214
Query: 134 KACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLV 193
A G LL +G+ +HG +K G++ + V N L+ MY KF A +VF+ M +RD V
Sbjct: 215 PAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSV 274
Query: 194 SWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQV 253
S+N M+ GY + +S+ F E L KPD L++ S L C + K I+ +
Sbjct: 275 SYNTMICGYLKLEMVEESVRMFLENLD-QFKPDLLTVSSVLRACGHLRDLSLAKYIYNYM 333
Query: 254 IRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESF 313
++ G L+ V+ LID+YAKCG + A VFN M CK+ V+WN++I GY +G +E+
Sbjct: 334 LKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAM 393
Query: 314 TCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMY 373
K M D IT + L+ ++ L GK +H I+ L + AL+DMY
Sbjct: 394 KLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMY 453
Query: 374 GKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIA 433
KCG++ + +F + + V+WN +I+A V+ G L++ +R + PD T
Sbjct: 454 AKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFL 513
Query: 434 SILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFK 493
LP A LA K+IH + + S NA++ MY+KCG L+ + R F+ MS +
Sbjct: 514 VTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRR 573
Query: 494 NLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELF 553
++V+W MI AY ++G G +++ F+ M+++GI P+ F++++ +CS SGLV+EG F
Sbjct: 574 DVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACF 633
Query: 554 NSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTASRNNND 613
MK Y ID IEHY C+VDLL R+ + A++FI+ MP+ P A IW S+L A R + D
Sbjct: 634 EKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGD 693
Query: 614 IFFAEFAAKHILSHDNDNTGCYVLLANMYAEAGRWEDVEQIKLVMKKKGLAKTVDCCTVE 673
+ AE ++ I+ + D+ G +L +N YA +W+ V I+ +K K + K +E
Sbjct: 694 METAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIE 753
Query: 674 SKGKSQKFINNNKSHQQAYMIYDVLDIILKKIGEDVYI---HSLSKFRPADVIKKKMKSP 730
F + + S Q+ IY L+I+ + ++ YI +S+ + K+++
Sbjct: 754 VGKNVHVFSSGDDSAPQSEAIYKSLEILYSLMAKEGYIPDPREVSQNLEEEEEKRRLIC- 812
Query: 731 QNHSVKLAICFGLISTAIGKPIIIRKNTRICKDCHIAAKKISRVTKREIIVGDSKIFHHF 790
HS +LAI FGL++T G P+ + KN R+C DCH K IS++ REI+V D+ FH F
Sbjct: 813 -GHSERLAIAFGLLNTEPGTPLQVMKNLRVCGDCHEVTKLISKIVGREILVRDANRFHLF 871
Query: 791 EDGRCSCGDYW 801
+DG CSC D W
Sbjct: 872 KDGTCSCKDRW 882
Score = 259 bits (662), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 153/516 (29%), Positives = 277/516 (53%), Gaps = 3/516 (0%)
Query: 78 NALYLFEKMNQP-DTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKAC 136
++L +F +++ + Y+WN IIR FS GLF E ++FY ++ + D +TFP VIKAC
Sbjct: 57 SSLSVFRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKAC 116
Query: 137 GRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWN 196
L G V+ +++ +G + D++V N+L+DMY + G + A +VF+ MP+RDLVSWN
Sbjct: 117 AGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWN 176
Query: 197 CMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRN 256
+++GY G ++L + E+ PD ++ S L V+ G+ +H +++
Sbjct: 177 SLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKS 236
Query: 257 GLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCL 316
G+ ++V L+ MY K + A RVF+EM ++ V++N MI GY + +E +
Sbjct: 237 GVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGY-LKLEMVEESVRM 295
Query: 317 KRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKC 376
D PD +T+ ++L +C L K I+ Y ++ F+ + L+D+Y KC
Sbjct: 296 FLENLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKC 355
Query: 377 GQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASIL 436
G + A VF + K+ VSWN+II+ Y+Q+G EA++LF + + D +T ++
Sbjct: 356 GDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLI 415
Query: 437 PAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLV 496
LA + K +H+ K + + SNA++ MYAKCG++ + + F SM + V
Sbjct: 416 SVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTV 475
Query: 497 SWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSM 556
+WNT+I A G +Q+ ++M+++ + P+ +TF+ L C+ G E+ +
Sbjct: 476 TWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCL 535
Query: 557 KMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEM 592
+ + + ++ ++++ + G L+ + + E M
Sbjct: 536 -LRFGYESELQIGNALIEMYSKCGCLENSSRVFERM 570
Score = 199 bits (505), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 136/498 (27%), Positives = 256/498 (51%), Gaps = 19/498 (3%)
Query: 130 PFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAM-P 188
PF+ +A + E +++H +I +GLD + LID Y F + VF + P
Sbjct: 8 PFISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSP 67
Query: 189 LRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKE 248
+++ WN ++ + G ++L + ++ PD+ + S + C+ G
Sbjct: 68 AKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDL 127
Query: 249 IHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGH 308
++ Q++ G E D+ V +L+DMY++ G + A +VF+EM +++V+WN++I GY+ +G+
Sbjct: 128 VYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGY 187
Query: 309 FLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLL---EGKCIHGYAIRKMFLPHLVL 365
+ E+ ++ ++PD+ T+ ++LP+ FG LL +G+ +HG+A++ +V+
Sbjct: 188 YEEALEIYHELKNSWIVPDSFTVSSVLPA---FGNLLVVKQGQGLHGFALKSGVNSVVVV 244
Query: 366 ETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRN-QT 424
LV MY K + A VF ++ ++ VS+N +I Y++ EE++ +F L N
Sbjct: 245 NNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMF--LENLDQ 302
Query: 425 LKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTAR 484
KPD +T++S+L A L +S K I+ Y+ K + N ++ +YAKCGD+ TAR
Sbjct: 303 FKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITAR 362
Query: 485 RYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISG 544
F+SM K+ VSWN++I Y G +++LF M + + T++ L+S +
Sbjct: 363 DVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLA 422
Query: 545 LVNEGWELF-NSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGS 603
+ G L N +K ID + + ++D+ + G + + + M T W +
Sbjct: 423 DLKFGKGLHSNGIKSGICIDLSVSN--ALIDMYAKCGEVGDSLKIFSSMGTGDTV-TWNT 479
Query: 604 LLTASRNNNDIFFAEFAA 621
+++A + F +FA
Sbjct: 480 VISAC-----VRFGDFAT 492
Score = 159 bits (401), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 109/377 (28%), Positives = 175/377 (46%), Gaps = 11/377 (2%)
Query: 70 FVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTF 129
+ G M A +F M DT WN II G+ G E + + M D+ T+
Sbjct: 352 YAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITY 411
Query: 130 PFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPL 189
+I RL GK +H IK G+ D+ V N+LIDMY K G V + K+F +M
Sbjct: 412 LMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGT 471
Query: 190 RDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEI 249
D V+WN +++ GD L +M PD + + +L C+ R GKEI
Sbjct: 472 GDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEI 531
Query: 250 HCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHF 309
HC ++R G E ++ + +LI+MY+KCG ++ + RVF M+ +++V W MI Y + G
Sbjct: 532 HCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEG 591
Query: 310 LESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEG-KCIHGYAIRKMFLPHLVLETA 368
++ M++ ++PD++ I ++ +CS G + EG C P +
Sbjct: 592 EKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYAC 651
Query: 369 LVDMYGKCGQLKFAECVFGRINEKNMVS-WNAIIAAYVQNGRNEEALELFHCLRNQTLKP 427
+VD+ + ++ AE + K S W +++ A +G E A + R L P
Sbjct: 652 VVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSR--RIIELNP 709
Query: 428 DAVTIASILPAYAELAT 444
D P Y+ LA+
Sbjct: 710 DD-------PGYSILAS 719
>AT1G16480.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: shoot apex;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT4G13650.1). | chr1:5625843-5628656
REVERSE
Length = 937
Score = 443 bits (1139), Expect = e-124, Method: Compositional matrix adjust.
Identities = 248/760 (32%), Positives = 415/760 (54%), Gaps = 4/760 (0%)
Query: 44 KKQMSETPKRGMIKPNSLSLTRSLCEFVDS-GAMDNALYLFEKMNQPDTYIWNVIIRGFS 102
++ + + K G+ + L++ SL + S G +D A Y+F++M++ DT WN I ++
Sbjct: 180 RQIIGQVVKSGL--ESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYA 237
Query: 103 NKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIY 162
G +E + M +++ T ++ G + G+ +HG ++K+G D +
Sbjct: 238 QNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVC 297
Query: 163 VCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLG 222
VCN+L+ MY G A VF+ MP +DL+SWN ++ + G L +L M+ G
Sbjct: 298 VCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSG 357
Query: 223 EKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAE 282
+ + ++ S+L C G+ +H V+ +GL + ++ +L+ MY K G++ +
Sbjct: 358 KSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESR 417
Query: 283 RVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFG 342
RV +M +++VAWNA+IGGYA + ++ + M+ + + + IT++++L +C G
Sbjct: 418 RVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPG 477
Query: 343 TLLE-GKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAII 401
LLE GK +H Y + F ++ +L+ MY KCG L ++ +F ++ +N+++WNA++
Sbjct: 478 DLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAML 537
Query: 402 AAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELS 461
AA +G EE L+L +R+ + D + + L A A+LA + E +Q+H KL
Sbjct: 538 AANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFE 597
Query: 462 SNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRM 521
++F NA MY+KCG++ + ++L SWN +I A HG+ F M
Sbjct: 598 HDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEM 657
Query: 522 KQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGN 581
+ GI+P TFVSLL++CS GLV++G ++ + D+ ++ IEH C++DLLGR+G
Sbjct: 658 LEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGR 717
Query: 582 LDAAKQFIEEMPLVPTARIWGSLLTASRNNNDIFFAEFAAKHILSHDNDNTGCYVLLANM 641
L A+ FI +MP+ P +W SLL + + + ++ AA+++ + ++ YVL +NM
Sbjct: 718 LAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNM 777
Query: 642 YAEAGRWEDVEQIKLVMKKKGLAKTVDCCTVESKGKSQKFINNNKSHQQAYMIYDVLDII 701
+A GRWEDVE ++ M K + K C V+ K K F +++H Q IY L+ I
Sbjct: 778 FATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDI 837
Query: 702 LKKIGEDVYIHSLSKFRPADVIKKKMKSPQNHSVKLAICFGLISTAIGKPIIIRKNTRIC 761
K I E Y+ S+ ++K + NHS +LA+ + L+ST G + I KN RIC
Sbjct: 838 KKLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPEGSTVRIFKNLRIC 897
Query: 762 KDCHIAAKKISRVTKREIIVGDSKIFHHFEDGRCSCGDYW 801
DCH K +SRV R I++ D FHHFE G CSC DYW
Sbjct: 898 SDCHSVYKFVSRVIGRRIVLRDQYRFHHFERGLCSCKDYW 937
Score = 243 bits (620), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 147/472 (31%), Positives = 246/472 (52%), Gaps = 1/472 (0%)
Query: 74 GAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVI 133
G + A +LF+ M + WN ++ G GL+ E ++F+ +M GI +F ++
Sbjct: 6 GRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLV 65
Query: 134 KACGRLLS-FIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDL 192
ACGR S F EG +VHG + K GL D+YV +++ +Y +G V + KVFE MP R++
Sbjct: 66 TACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNV 125
Query: 193 VSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQ 252
VSW ++ GY G+ + + +K M G G + SM + C + G++I Q
Sbjct: 126 VSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQ 185
Query: 253 VIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLES 312
V+++GLE + V+ SLI M G VDYA +F++M+ ++ ++WN++ YA NGH ES
Sbjct: 186 VVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEES 245
Query: 313 FTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDM 372
F M+ + ++ T+ LL G+ IHG ++ F + + L+ M
Sbjct: 246 FRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRM 305
Query: 373 YGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTI 432
Y G+ A VF ++ K+++SWN+++A++V +GR+ +AL L + + + VT
Sbjct: 306 YAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTF 365
Query: 433 ASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSF 492
S L A + + +H + L N NA+V MY K G++ +RR M
Sbjct: 366 TSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPR 425
Query: 493 KNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISG 544
+++V+WN +I YA ++ F M+ G+ N T VS+LS+C + G
Sbjct: 426 RDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPG 477
Score = 242 bits (618), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 141/503 (28%), Positives = 263/503 (52%), Gaps = 4/503 (0%)
Query: 82 LFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLS 141
+FE+M + W ++ G+S+KG +EVID Y M EG+G + + VI +CG L
Sbjct: 116 VFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKD 175
Query: 142 FIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNG 201
G+++ G+++K GL+ + V NSLI M G V+ A +F+ M RD +SWN +
Sbjct: 176 ESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAA 235
Query: 202 YRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELD 261
Y G +S F M ++ + ++ + L + G+ IH V++ G +
Sbjct: 236 YAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSV 295
Query: 262 IMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQE 321
+ V +L+ MYA G+ A VF +M K++++WN+++ + +G L++ L M
Sbjct: 296 VCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMIS 355
Query: 322 DNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKF 381
+ +T + L +C +G+ +HG + + ++ ALV MYGK G++
Sbjct: 356 SGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSE 415
Query: 382 AECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAE 441
+ V ++ +++V+WNA+I Y ++ ++AL F +R + + + +T+ S+L A
Sbjct: 416 SRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLL 475
Query: 442 LATVSE-CKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNT 500
+ E K +HAYI S+ N+++ MYAKCGDL +++ F+ + +N+++WN
Sbjct: 476 PGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNA 535
Query: 501 MIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFN-SMKMD 559
M+ A A HG G ++L S+M+ G+ ++ +F LS+ + ++ EG +L ++K+
Sbjct: 536 MLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLG 595
Query: 560 YNIDYGIEHYGCMVDLLGRTGNL 582
+ D I + D+ + G +
Sbjct: 596 FEHDSFI--FNAAADMYSKCGEI 616
Score = 202 bits (514), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 121/445 (27%), Positives = 222/445 (49%), Gaps = 3/445 (0%)
Query: 170 MYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLS 229
MY KFG V+ A +F+ MP+R+ VSWN M++G +G L+ + F++M LG KP
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 230 MISSLGGCS-IGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEM 288
+ S + C G R G ++H V ++GL D+ V T+++ +Y G V + +VF EM
Sbjct: 61 IASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM 120
Query: 289 TCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGK 348
+N+V+W +++ GY+ G E K M+ + + + +M ++ SC G+
Sbjct: 121 PDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGR 180
Query: 349 CIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNG 408
I G ++ L +E +L+ M G G + +A +F +++E++ +SWN+I AAY QNG
Sbjct: 181 QIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNG 240
Query: 409 RNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSN 468
EE+ +F +R + ++ T++++L + + IH + K+ S N
Sbjct: 241 HIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCN 300
Query: 469 AIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEP 528
++ MYA G A F M K+L+SWN+++ ++ G ++ L M +G
Sbjct: 301 TLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSV 360
Query: 529 NESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQF 588
N TF S L++C +G + + + + + Y +V + G+ G + +++
Sbjct: 361 NYVTFTSALAACFTPDFFEKG-RILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRV 419
Query: 589 IEEMPLVPTARIWGSLLTASRNNND 613
+ +MP W +L+ + D
Sbjct: 420 LLQMPRRDVV-AWNALIGGYAEDED 443
>AT3G26782.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED IN:
seed; EXPRESSED DURING: E expanded cotyledon stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT3G23330.1); Has 13812 Blast hits to 4961
proteins in 140 species: Archae - 0; Bacteria - 2;
Metazoa - 58; Fungi - 30; Plants - 13522; Viruses - 0;
Other Eukaryotes - 200 (source: NCBI BLink). |
chr3:9850594-9852682 FORWARD
Length = 659
Score = 442 bits (1136), Expect = e-124, Method: Compositional matrix adjust.
Identities = 228/621 (36%), Positives = 370/621 (59%), Gaps = 11/621 (1%)
Query: 191 DLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIH 250
D+ SWN ++ GD ++L+ F M L P R S ++ CS + GK+ H
Sbjct: 40 DVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTH 99
Query: 251 CQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFL 310
Q G + DI V ++LI MY+ CGK++ A +VF+E+ +NIV+W +MI GY +NG+ L
Sbjct: 100 QQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNAL 159
Query: 311 ESFTCLKRM------QEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLV 364
++ + K + +D + D++ +++++ +CS+ + IH + I++ F +
Sbjct: 160 DAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVS 219
Query: 365 LETALVDMYGKCGQ--LKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCL-R 421
+ L+D Y K G+ + A +F +I +K+ VS+N+I++ Y Q+G + EA E+F L +
Sbjct: 220 VGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVK 279
Query: 422 NQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQ 481
N+ + +A+T++++L A + + K IH + ++ L + +I+ MY KCG ++
Sbjct: 280 NKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVE 339
Query: 482 TARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCS 541
TAR+ FD M KN+ SW MI Y +HG +++LF M +G+ PN TFVS+L++CS
Sbjct: 340 TARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACS 399
Query: 542 ISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIW 601
+GL EGW FN+MK + ++ G+EHYGCMVDLLGR G L A I+ M + P + IW
Sbjct: 400 HAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIW 459
Query: 602 GSLLTASRNNNDIFFAEFAAKHILSHDNDNTGCYVLLANMYAEAGRWEDVEQIKLVMKKK 661
SLL A R + ++ AE + + D+ N G Y+LL+++YA+AGRW+DVE+++++MK +
Sbjct: 460 SSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNR 519
Query: 662 GLAKTVDCCTVESKGKSQKFINNNKSHQQAYMIYDVLDIILKKIGEDVYIHSLSKF-RPA 720
GL K +E G+ F+ ++ H Q IY+ L + +K+ E Y+ + S
Sbjct: 520 GLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTSSVCHDV 579
Query: 721 DVIKKKMKSPQNHSVKLAICFGLISTAIGKPIIIRKNTRICKDCHIAAKKISRVTKREII 780
D +K+M + + HS KLAI FG+++T G + + KN R+C DCH K IS++ RE +
Sbjct: 580 DEEEKEM-TLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKIVDREFV 638
Query: 781 VGDSKIFHHFEDGRCSCGDYW 801
V D+K FHHF+DG CSCGDYW
Sbjct: 639 VRDAKRFHHFKDGGCSCGDYW 659
Score = 211 bits (538), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 134/443 (30%), Positives = 229/443 (51%), Gaps = 12/443 (2%)
Query: 78 NALYLFEK-MNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKAC 136
N LF + +++ D + WN +I + G E + + M + +FP IKAC
Sbjct: 27 NLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKAC 86
Query: 137 GRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWN 196
L GK+ H + G DI+V ++LI MY G +E A KVF+ +P R++VSW
Sbjct: 87 SSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWT 146
Query: 197 CMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCS-IGCCVRG-----GKEIH 250
M+ GY + G+ L ++ FK++L D + S+G S I C R + IH
Sbjct: 147 SMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIH 206
Query: 251 CQVIRNGLELDIMVQTSLIDMYAKCGK--VDYAERVFNEMTCKNIVAWNAMIGGYAINGH 308
VI+ G + + V +L+D YAK G+ V A ++F+++ K+ V++N+++ YA +G
Sbjct: 207 SFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGM 266
Query: 309 FLESFTCLKRMQEDNLIP-DAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLET 367
E+F +R+ ++ ++ +AIT+ +L + S G L GKCIH IR +++ T
Sbjct: 267 SNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGT 326
Query: 368 ALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKP 427
+++DMY KCG+++ A F R+ KN+ SW A+IA Y +G +ALELF + + ++P
Sbjct: 327 SIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRP 386
Query: 428 DAVTIASILPAYAELAT-VSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRY 486
+ +T S+L A + V + +A + + +V + + G LQ A
Sbjct: 387 NYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDL 446
Query: 487 FDSMSFK-NLVSWNTMIMAYAIH 508
M K + + W++++ A IH
Sbjct: 447 IQRMKMKPDSIIWSSLLAACRIH 469
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 111/220 (50%), Gaps = 16/220 (7%)
Query: 385 VFGR-INEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELA 443
+F R +++ ++ SWN++IA ++G + EAL F +R +L P + + A + L
Sbjct: 31 LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLF 90
Query: 444 TVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIM 503
+ KQ H S+ F S+A++ MY+ CG L+ AR+ FD + +N+VSW +MI
Sbjct: 91 DIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIR 150
Query: 504 AYAIHGFGTISIQLFSRMKQNGIEPNESTF------VSLLSSCS---ISGLVNEGWELFN 554
Y ++G ++ LF + + + +++ F VS++S+CS GL E +
Sbjct: 151 GYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLT----ESIH 206
Query: 555 SMKMDYNIDYGIEHYGCMVDLL--GRTGNLDAAKQFIEEM 592
S + D G+ ++D G G + A++ +++
Sbjct: 207 SFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQI 246
>AT1G08070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:2514374-2516599 REVERSE
Length = 741
Score = 441 bits (1134), Expect = e-123, Method: Compositional matrix adjust.
Identities = 246/693 (35%), Positives = 393/693 (56%), Gaps = 42/693 (6%)
Query: 148 VHGKLIKIGLDRDIYVCNSLID---MYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRV 204
+H ++IKIGL Y + LI+ + F + A VF+ + +L+ WN M G+ +
Sbjct: 52 IHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHAL 111
Query: 205 IGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMV 264
D + +L + M+ LG P+ + L C+ + G++IH V++ G +LD+ V
Sbjct: 112 SSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYV 171
Query: 265 QTSLIDMYAKCGK-------------------------------VDYAERVFNEMTCKNI 293
TSLI MY + G+ ++ A+++F+E+ K++
Sbjct: 172 HTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDV 231
Query: 294 VAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGY 353
V+WNAMI GYA G++ E+ K M + N+ PD TM+ ++ +C++ G++ G+ +H +
Sbjct: 232 VSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLW 291
Query: 354 AIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEA 413
F +L + AL+D+Y KCG+L+ A +F R+ K+++SWN +I Y +EA
Sbjct: 292 IDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEA 351
Query: 414 LELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKL--ELSSNTFTSNAIV 471
L LF + P+ VT+ SILPA A L + + IH YI K +++ + +++
Sbjct: 352 LLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLI 411
Query: 472 YMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNES 531
MYAKCGD++ A + F+S+ K+L SWN MI +A+HG S LFSRM++ GI+P++
Sbjct: 412 DMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDI 471
Query: 532 TFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEE 591
TFV LLS+CS SG+++ G +F +M DY + +EHYGCM+DLLG +G A++ I
Sbjct: 472 TFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINM 531
Query: 592 MPLVPTARIWGSLLTASRNNNDIFFAEFAAKHILSHDNDNTGCYVLLANMYAEAGRWEDV 651
M + P IW SLL A + + ++ E A++++ + +N G YVLL+N+YA AGRW +V
Sbjct: 532 MEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEV 591
Query: 652 EQIKLVMKKKGLAKTVDCCTVESKGKSQKFINNNKSHQQAYMIYDVL---DIILKKIGED 708
+ + ++ KG+ K C ++E +FI +K H + IY +L +++L+K G
Sbjct: 592 AKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAG-- 649
Query: 709 VYIHSLSKFRPADVIKKKMKSPQNHSVKLAICFGLISTAIGKPIIIRKNTRICKDCHIAA 768
++ S+ + K + ++HS KLAI FGLIST G + I KN R+C++CH A
Sbjct: 650 -FVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEAT 708
Query: 769 KKISRVTKREIIVGDSKIFHHFEDGRCSCGDYW 801
K IS++ KREII D FHHF DG CSC DYW
Sbjct: 709 KLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
Score = 241 bits (616), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 120/412 (29%), Positives = 226/412 (54%), Gaps = 33/412 (8%)
Query: 79 ALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGR 138
A+ +F+ + +P+ IWN + RG + + Y M G+ +++TFPFV+K+C +
Sbjct: 87 AISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAK 146
Query: 139 LLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFK------------------------- 173
+F EG+++HG ++K+G D D+YV SLI MY +
Sbjct: 147 SKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTAL 206
Query: 174 ------FGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDR 227
G++E A+K+F+ +P++D+VSWN M++GY G+ ++L FK+M+ +PD
Sbjct: 207 IKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDE 266
Query: 228 LSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNE 287
+M++ + C+ + G+++H + +G ++ + +LID+Y+KCG+++ A +F
Sbjct: 267 STMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFER 326
Query: 288 MTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEG 347
+ K++++WN +IGGY + E+ + M P+ +TM+++LP+C+ G + G
Sbjct: 327 LPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIG 386
Query: 348 KCIHGYAIRKM--FLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYV 405
+ IH Y +++ L T+L+DMY KCG ++ A VF I K++ SWNA+I +
Sbjct: 387 RWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFA 446
Query: 406 QNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITK 457
+GR + + +LF +R ++PD +T +L A + + + I +T+
Sbjct: 447 MHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQ 498
Score = 185 bits (469), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 108/339 (31%), Positives = 183/339 (53%), Gaps = 8/339 (2%)
Query: 45 KQMSETPKRGMIKPNSLSLTRSLCEFVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNK 104
K ++P R ++ S T + + G ++NA LF+++ D WN +I G++
Sbjct: 190 KVFDKSPHRDVV-----SYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAET 244
Query: 105 GLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVC 164
G ++E ++ + M + D T V+ AC + S G++VH + G ++ +
Sbjct: 245 GNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIV 304
Query: 165 NSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEK 224
N+LID+Y K G +E A +FE +P +D++SWN ++ GY + ++L+ F+EML GE
Sbjct: 305 NALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGET 364
Query: 225 PDRLSMISSLGGCSIGCCVRGGKEIHCQVIR--NGLELDIMVQTSLIDMYAKCGKVDYAE 282
P+ ++M+S L C+ + G+ IH + + G+ ++TSLIDMYAKCG ++ A
Sbjct: 365 PNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAH 424
Query: 283 RVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFG 342
+VFN + K++ +WNAMI G+A++G SF RM++ + PD IT + LL +CS G
Sbjct: 425 QVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSG 484
Query: 343 TLLEGKCIHGYAIRKM-FLPHLVLETALVDMYGKCGQLK 380
L G+ I + P L ++D+ G G K
Sbjct: 485 MLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFK 523
>AT3G49170.1 | Symbols: EMB2261 | EMB2261 (embryo defective 2261) |
chr3:18226954-18229600 REVERSE
Length = 850
Score = 432 bits (1110), Expect = e-121, Method: Compositional matrix adjust.
Identities = 255/760 (33%), Positives = 413/760 (54%), Gaps = 16/760 (2%)
Query: 56 IKPNSLSLTRSLCEFVDSGAMDNALYLFEKMNQ---PDTYIWNVIIRGFSNKGLFQEVID 112
I+P+S+ + + SG A +FE M + D W+ ++ + N G + I
Sbjct: 93 IEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIK 152
Query: 113 FYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIG-LDRDIYVCNSLIDMY 171
+ G+ +++ + VI+AC G+ G L+K G + D+ V SLIDM+
Sbjct: 153 VFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMF 212
Query: 172 FKF-GFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSM 230
K E A KVF+ M ++V+W M+ +G +++ F +M+ G + D+ ++
Sbjct: 213 VKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTL 272
Query: 231 ISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKC---GKVDYAERVFNE 287
S C+ + GK++H IR+GL D V+ SL+DMYAKC G VD +VF+
Sbjct: 273 SSVFSACAELENLSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDR 330
Query: 288 MTCKNIVAWNAMIGGYAINGHF-LESFTCLKRM-QEDNLIPDAITMINLLPSCSKFGTLL 345
M ++++W A+I GY N + E+ M + ++ P+ T + +C
Sbjct: 331 MEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPR 390
Query: 346 EGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYV 405
GK + G A ++ + + +++ M+ K +++ A+ F ++EKN+VS+N +
Sbjct: 391 VGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTC 450
Query: 406 QNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTF 465
+N E+A +L + + L A T AS+L A + ++ + +QIH+ + KL LS N
Sbjct: 451 RNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQP 510
Query: 466 TSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNG 525
NA++ MY+KCG + TA R F+ M +N++SW +MI +A HGF ++ F++M + G
Sbjct: 511 VCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEG 570
Query: 526 IEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAA 585
++PNE T+V++LS+CS GLV+EGW FNSM D+ I +EHY CMVDLL R G L A
Sbjct: 571 VKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDA 630
Query: 586 KQFIEEMPLVPTARIWGSLLTASRNNNDIFFAEFAAKHILSHDNDNTGCYVLLANMYAEA 645
+FI MP +W + L A R +++ + AA+ IL D + Y+ L+N+YA A
Sbjct: 631 FEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACA 690
Query: 646 GRWEDVEQIKLVMKKKGLAKTVDCCTVESKGKSQKFINNNKSHQQAYMIYDVLDIILKKI 705
G+WE+ +++ MK++ L K C +E K KF + +H A+ IYD LD ++ +I
Sbjct: 691 GKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEI 750
Query: 706 GEDVYIHS----LSKFRPADVIKKKMKSPQNHSVKLAICFGLISTAIGKPIIIRKNTRIC 761
Y+ L K + +K + HS K+A+ FGLIST+ +P+ + KN R+C
Sbjct: 751 KRCGYVPDTDLVLHKLEEENDEAEKERLLYQHSEKIAVAFGLISTSKSRPVRVFKNLRVC 810
Query: 762 KDCHIAAKKISRVTKREIIVGDSKIFHHFEDGRCSCGDYW 801
DCH A K IS V+ REI++ D FHHF+DG+CSC DYW
Sbjct: 811 GDCHNAMKYISTVSGREIVLRDLNRFHHFKDGKCSCNDYW 850
Score = 191 bits (485), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 152/519 (29%), Positives = 254/519 (48%), Gaps = 21/519 (4%)
Query: 103 NKGLFQEVIDFYHRMEYEGI-GIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDI 161
N G + + M +GI +D+ TF ++K+C R F GK VH +LI+ ++ D
Sbjct: 38 NAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDS 97
Query: 162 YVCNSLIDMYFKFGFVEVAEKVFEAMPL---RDLVSWNCMVNGYRVIGDGLKSLMCFKEM 218
+ NSLI +Y K G AE VFE M RD+VSW+ M+ Y G L ++ F E
Sbjct: 98 VLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEF 157
Query: 219 LGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNG-LELDIMVQTSLIDMYAKC-G 276
L LG P+ + + CS V G+ +++ G E D+ V SLIDM+ K
Sbjct: 158 LELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGEN 217
Query: 277 KVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLP 336
+ A +VF++M+ N+V W MI G E+ M D T+ ++
Sbjct: 218 SFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFS 277
Query: 337 SCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKC---GQLKFAECVFGRINEKN 393
+C++ L GK +H +AIR + +E +LVDMY KC G + VF R+ + +
Sbjct: 278 ACAELENLSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDHS 335
Query: 394 MVSWNAIIAAYVQN-GRNEEALELFHCLRNQT-LKPDAVTIASILPAYAELATVSECKQI 451
++SW A+I Y++N EA+ LF + Q ++P+ T +S A L+ KQ+
Sbjct: 336 VMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQV 395
Query: 452 HAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFG 511
K L+SN+ +N+++ M+ K ++ A+R F+S+S KNLVS+NT + +
Sbjct: 396 LGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNF 455
Query: 512 TISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGC 571
+ +L S + + + + TF SLLS + G + +G E +S + +
Sbjct: 456 EQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKG-EQIHSQVVKLGLSCNQPVCNA 514
Query: 572 MVDLLGRTGNLDAAKQ---FIEEMPLVPTARIWGSLLTA 607
++ + + G++D A + F+E ++ W S++T
Sbjct: 515 LISMYSKCGSIDTASRVFNFMENRNVIS----WTSMITG 549
>AT5G39350.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:15750929-15752962 FORWARD
Length = 677
Score = 431 bits (1108), Expect = e-121, Method: Compositional matrix adjust.
Identities = 231/626 (36%), Positives = 361/626 (57%), Gaps = 11/626 (1%)
Query: 59 NSLSLTRSLCEFVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRME 118
++LS+T +LC G + A LFE+M Q +N++IR + +GL+ + I + RM
Sbjct: 53 STLSVTYALC-----GHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMV 107
Query: 119 YEGIGI--DNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGF 176
EG+ D +T+PFV KA G L S G VHG++++ RD YV N+L+ MY FG
Sbjct: 108 SEGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGK 167
Query: 177 VEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGG 236
VE+A VF+ M RD++SWN M++GY G +LM F M+ D +++S L
Sbjct: 168 VEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPV 227
Query: 237 CSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAW 296
C + G+ +H V L I V+ +L++MY KCG++D A VF+ M ++++ W
Sbjct: 228 CGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITW 287
Query: 297 NAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIR 356
MI GY +G + + MQ + + P+A+T+ +L+ C + +GKC+HG+A+R
Sbjct: 288 TCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVR 347
Query: 357 KMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALEL 416
+ +++ET+L+ MY KC ++ VF ++ + W+AIIA VQN +AL L
Sbjct: 348 QQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGL 407
Query: 417 FHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAK 476
F +R + ++P+ T+ S+LPAYA LA + + IH Y+TK S+ + +V++Y+K
Sbjct: 408 FKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSK 467
Query: 477 CGDLQTARRYFDSMS----FKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNEST 532
CG L++A + F+ + K++V W +I Y +HG G ++Q+F M ++G+ PNE T
Sbjct: 468 CGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEIT 527
Query: 533 FVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEM 592
F S L++CS SGLV EG LF M Y HY C+VDLLGR G LD A I +
Sbjct: 528 FTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTI 587
Query: 593 PLVPTARIWGSLLTASRNNNDIFFAEFAAKHILSHDNDNTGCYVLLANMYAEAGRWEDVE 652
P PT+ +WG+LL A + ++ E AA + + +NTG YVLLAN+YA GRW+D+E
Sbjct: 588 PFEPTSTVWGALLAACVTHENVQLGEMAANKLFELEPENTGNYVLLANIYAALGRWKDME 647
Query: 653 QIKLVMKKKGLAKTVDCCTVESKGKS 678
+++ +M+ GL K T+E + S
Sbjct: 648 KVRSMMENVGLRKKPGHSTIEIRSNS 673
Score = 183 bits (465), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 120/460 (26%), Positives = 224/460 (48%), Gaps = 24/460 (5%)
Query: 162 YVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGL 221
++ ++L Y G + A K+FE MP L+S+N ++ Y G ++ F M+
Sbjct: 50 HILSTLSVTYALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSE 109
Query: 222 GEK--PDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVD 279
G K PD + ++ G +H +++R+ D VQ +L+ MY GKV+
Sbjct: 110 GVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVE 169
Query: 280 YAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCS 339
A VF+ M +++++WN MI GY NG+ ++ M +++ D T++++LP C
Sbjct: 170 MARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCG 229
Query: 340 KFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNA 399
L G+ +H K + ++ ALV+MY KCG++ A VF R+ +++++W
Sbjct: 230 HLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTC 289
Query: 400 IIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLE 459
+I Y ++G E ALEL ++ + ++P+AVTIAS++ + V++ K +H + + +
Sbjct: 290 MINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQ 349
Query: 460 LSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFS 519
+ S+ +++ MYAKC + R F S + W+ +I + + ++ LF
Sbjct: 350 VYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFK 409
Query: 520 RMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCM------- 572
RM++ +EPN +T SLL + + ++ NI + G M
Sbjct: 410 RMRREDVEPNIATLNSLLPA----------YAALADLRQAMNIHCYLTKTGFMSSLDAAT 459
Query: 573 --VDLLGRTGNLDAAKQF---IEEMPLVPTARIWGSLLTA 607
V + + G L++A + I+E +WG+L++
Sbjct: 460 GLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISG 499
>AT3G15130.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5097153-5099222 REVERSE
Length = 689
Score = 431 bits (1107), Expect = e-120, Method: Compositional matrix adjust.
Identities = 243/679 (35%), Positives = 383/679 (56%), Gaps = 10/679 (1%)
Query: 132 VIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRD 191
+++ C R +G +VH L+K G ++ N LIDMY K +A KVF++MP R+
Sbjct: 12 ILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERN 71
Query: 192 LVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHC 251
+VSW+ +++G+ + GD SL F EM G P+ + ++L C + + G +IH
Sbjct: 72 VVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHG 131
Query: 252 QVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLE 311
++ G E+ + V SL+DMY+KCG+++ AE+VF + +++++WNAMI G+ G+ +
Sbjct: 132 FCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSK 191
Query: 312 SFTCLKRMQEDNLI--PDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMF--LPHLVLET 367
+ MQE N+ PD T+ +LL +CS G + GK IHG+ +R F +
Sbjct: 192 ALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITG 251
Query: 368 ALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKP 427
+LVD+Y KCG L A F +I EK M+SW+++I Y Q G EA+ LF L+ +
Sbjct: 252 SLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQI 311
Query: 428 DAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYF 487
D+ ++SI+ +A+ A + + KQ+ A KL T N++V MY KCG + A + F
Sbjct: 312 DSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCF 371
Query: 488 DSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVN 547
M K+++SW +I Y HG G S+++F M ++ IEP+E ++++LS+CS SG++
Sbjct: 372 AEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIK 431
Query: 548 EGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTA 607
EG ELF+ + + I +EHY C+VDLLGR G L AK I+ MP+ P IW +LL+
Sbjct: 432 EGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSL 491
Query: 608 SRNNNDIFFAEFAAKHILSHDNDNTGCYVLLANMYAEAGRWEDVEQIKLVMKKKGLAKTV 667
R + DI + K +L D N YV+++N+Y +AG W + + + KGL K
Sbjct: 492 CRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEA 551
Query: 668 DCCTVESKGKSQKFINNNKSHQQAYMIYDVLDIILKKIGEDV-YIHSLSKFRPADV-IKK 725
VE + + F + SH +I + L +++ E++ Y++ L K D+ +
Sbjct: 552 GMSWVEIEREVHFFRSGEDSHPLTPVIQETLKEAERRLREELGYVYGL-KHELHDIDDES 610
Query: 726 KMKSPQNHSVKLAICFGLISTAI---GKPIIIRKNTRICKDCHIAAKKISRVTKREIIVG 782
K ++ + HS KLAI L + + GK I + KN R+C DCH K +S++TK +V
Sbjct: 611 KEENLRAHSEKLAIGLALATGGLNQKGKTIRVFKNLRVCVDCHEFIKGLSKITKIAYVVR 670
Query: 783 DSKIFHHFEDGRCSCGDYW 801
D+ FH FEDG CSCGDYW
Sbjct: 671 DAVRFHSFEDGCCSCGDYW 689
Score = 221 bits (564), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 132/441 (29%), Positives = 235/441 (53%), Gaps = 14/441 (3%)
Query: 79 ALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGR 138
A +F+ M + + W+ ++ G G + + + M +GI + FTF +KACG
Sbjct: 60 AYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGL 119
Query: 139 LLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCM 198
L + +G ++HG +KIG + + V NSL+DMY K G + AEKVF + R L+SWN M
Sbjct: 120 LNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAM 179
Query: 199 VNGYRVIGDGLKSLMCFKEM--LGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRN 256
+ G+ G G K+L F M + E+PD ++ S L CS + GK+IH ++R+
Sbjct: 180 IAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRS 239
Query: 257 GLEL--DIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFT 314
G + SL+D+Y KCG + A + F+++ K +++W+++I GYA G F+E+
Sbjct: 240 GFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMG 299
Query: 315 CLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLET----ALV 370
KR+QE N D+ + +++ + F L +GK + A++ LP LET ++V
Sbjct: 300 LFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVK---LPS-GLETSVLNSVV 355
Query: 371 DMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAV 430
DMY KCG + AE F + K+++SW +I Y ++G ++++ +F+ + ++PD V
Sbjct: 356 DMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEV 415
Query: 431 TIASILPAYAELATVSECKQIHAYITKLE-LSSNTFTSNAIVYMYAKCGDLQTARRYFDS 489
++L A + + E +++ + + + + +V + + G L+ A+ D+
Sbjct: 416 CYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDT 475
Query: 490 MSFK-NLVSWNTMIMAYAIHG 509
M K N+ W T++ +HG
Sbjct: 476 MPIKPNVGIWQTLLSLCRVHG 496
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 171/339 (50%), Gaps = 14/339 (4%)
Query: 74 GAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIG--IDNFTFPF 131
G ++ A +F ++ WN +I GF + G + +D + M+ I D FT
Sbjct: 156 GRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTS 215
Query: 132 VIKACGRLLSFIEGKKVHGKLIKIGLD--RDIYVCNSLIDMYFKFGFVEVAEKVFEAMPL 189
++KAC GK++HG L++ G + SL+D+Y K G++ A K F+ +
Sbjct: 216 LLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKE 275
Query: 190 RDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEI 249
+ ++SW+ ++ GY G+ ++++ FK + L + D ++ S +G + +R GK++
Sbjct: 276 KTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQM 335
Query: 250 HCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHF 309
++ L+ V S++DMY KCG VD AE+ F EM K++++W +I GY +G
Sbjct: 336 QALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLG 395
Query: 310 LESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEG-----KCIHGYAIRKMFLPHLV 364
+S M N+ PD + + +L +CS G + EG K + + I+ P +
Sbjct: 396 KKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIK----PRVE 451
Query: 365 LETALVDMYGKCGQLKFAECVFGRINEK-NMVSWNAIIA 402
+VD+ G+ G+LK A+ + + K N+ W +++
Sbjct: 452 HYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLS 490
Score = 132 bits (332), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 153/286 (53%), Gaps = 5/286 (1%)
Query: 324 LIPDA-ITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFA 382
+IP+ ++++L C++ G +G +H Y ++ +L+ L+DMY KC + A
Sbjct: 1 MIPNQRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMA 60
Query: 383 ECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAEL 442
VF + E+N+VSW+A+++ +V NG + +L LF + Q + P+ T ++ L A L
Sbjct: 61 YKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLL 120
Query: 443 ATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMI 502
+ + QIH + K+ N++V MY+KCG + A + F + ++L+SWN MI
Sbjct: 121 NALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMI 180
Query: 503 MAYAIHGFGTISIQLFSRMKQNGIE--PNESTFVSLLSSCSISGLVNEGWELFNSM-KMD 559
+ G+G+ ++ F M++ I+ P+E T SLL +CS +G++ G ++ + +
Sbjct: 181 AGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSG 240
Query: 560 YNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLL 605
++ G +VDL + G L +A++ +++ T W SL+
Sbjct: 241 FHCPSSATITGSLVDLYVKCGYLFSARKAFDQIK-EKTMISWSSLI 285
Score = 116 bits (290), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 133/253 (52%), Gaps = 3/253 (1%)
Query: 58 PNSLSLTRSLCE-FVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHR 116
P+S ++T SL + +V G + +A F+++ + W+ +I G++ +G F E + + R
Sbjct: 244 PSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKR 303
Query: 117 MEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGF 176
++ ID+F +I +GK++ +K+ + V NS++DMY K G
Sbjct: 304 LQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGL 363
Query: 177 VEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGG 236
V+ AEK F M L+D++SW ++ GY G G KS+ F EML +PD + ++ L
Sbjct: 364 VDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSA 423
Query: 237 CSIGCCVRGGKEIHCQVIR-NGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCK-NIV 294
CS ++ G+E+ +++ +G++ + ++D+ + G++ A+ + + M K N+
Sbjct: 424 CSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVG 483
Query: 295 AWNAMIGGYAING 307
W ++ ++G
Sbjct: 484 IWQTLLSLCRVHG 496
>AT2G29760.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:12712884-12715100 FORWARD
Length = 738
Score = 424 bits (1091), Expect = e-119, Method: Compositional matrix adjust.
Identities = 230/700 (32%), Positives = 394/700 (56%), Gaps = 36/700 (5%)
Query: 138 RLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDM--YFKFGFVEVAEKVFEAMPLRDLVSW 195
R +S + K+ HG +I+ G D Y + L M F +E A KVF+ +P + +W
Sbjct: 39 RCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAW 98
Query: 196 NCMVNGYRVIGDGLKSLMCFKEMLGLGE-KPDRLSMISSLGGCSIGCCVRGGKEIHCQVI 254
N ++ Y D + S+ F +M+ + P++ + + + + G+ +H +
Sbjct: 99 NTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAV 158
Query: 255 RNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFT 314
++ + D+ V SLI Y CG +D A +VF + K++V+WN+MI G+ G ++
Sbjct: 159 KSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALE 218
Query: 315 CLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYG 374
K+M+ +++ +TM+ +L +C+K L G+ + Y +L L A++DMY
Sbjct: 219 LFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYT 278
Query: 375 KCGQLKFAECVFGRINEKN-------------------------------MVSWNAIIAA 403
KCG ++ A+ +F + EK+ +V+WNA+I+A
Sbjct: 279 KCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISA 338
Query: 404 YVQNGRNEEALELFHCLRNQ-TLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSS 462
Y QNG+ EAL +FH L+ Q +K + +T+ S L A A++ + + IH+YI K +
Sbjct: 339 YEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRM 398
Query: 463 NTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMK 522
N ++A+++MY+KCGDL+ +R F+S+ +++ W+ MI A+HG G ++ +F +M+
Sbjct: 399 NFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQ 458
Query: 523 QNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNL 582
+ ++PN TF ++ +CS +GLV+E LF+ M+ +Y I +HY C+VD+LGR+G L
Sbjct: 459 EANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYL 518
Query: 583 DAAKQFIEEMPLVPTARIWGSLLTASRNNNDIFFAEFAAKHILSHDNDNTGCYVLLANMY 642
+ A +FIE MP+ P+ +WG+LL A + + ++ AE A +L + N G +VLL+N+Y
Sbjct: 519 EKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIY 578
Query: 643 AEAGRWEDVEQIKLVMKKKGLAKTVDCCTVESKGKSQKFINNNKSHQQAYMIYDVLDIIL 702
A+ G+WE+V +++ M+ GL K C ++E G +F++ + +H + +Y L ++
Sbjct: 579 AKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVM 638
Query: 703 KKIGEDVYIHSLSK-FRPADVIKKKMKSPQNHSVKLAICFGLISTAIGKPIIIRKNTRIC 761
+K+ + Y +S+ + + + K +S HS KLAIC+GLIST K I + KN R+C
Sbjct: 639 EKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVIRVIKNLRVC 698
Query: 762 KDCHIAAKKISRVTKREIIVGDSKIFHHFEDGRCSCGDYW 801
DCH AK IS++ REIIV D FHHF +G+CSC D+W
Sbjct: 699 GDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738
Score = 211 bits (537), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 134/517 (25%), Positives = 251/517 (48%), Gaps = 37/517 (7%)
Query: 58 PNSLSLTRSLCEFVDSGAMDNALYLFEKMNQPDTYIWNVIIRGF-SNKGLFQEVIDFYHR 116
P S S ++ +++ A +F+++ +P+++ WN +IR + S + F
Sbjct: 62 PYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDM 121
Query: 117 MEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGF 176
+ + +TFPF+IKA + S G+ +HG +K + D++V NSLI YF G
Sbjct: 122 VSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGD 181
Query: 177 VEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGG 236
++ A KVF + +D+VSWN M+NG+ G K+L FK+M K ++M+ L
Sbjct: 182 LDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSA 241
Query: 237 CSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVF----------- 285
C+ + G+++ + N + +++ + +++DMY KCG ++ A+R+F
Sbjct: 242 CAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTW 301
Query: 286 --------------------NEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQ-EDNL 324
N M K+IVAWNA+I Y NG E+ +Q + N+
Sbjct: 302 TTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNM 361
Query: 325 IPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAEC 384
+ IT+++ L +C++ G L G+ IH Y + + + +AL+ MY KCG L+ +
Sbjct: 362 KLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSRE 421
Query: 385 VFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELAT 444
VF + ++++ W+A+I +G EA+++F+ ++ +KP+ VT ++ A +
Sbjct: 422 VFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGL 481
Query: 445 VSECKQI-HAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVS-WNTMI 502
V E + + H + + IV + + G L+ A ++ ++M S W ++
Sbjct: 482 VDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALL 541
Query: 503 MAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSS 539
A IH ++ +R+ + +EP LLS+
Sbjct: 542 GACKIHANLNLAEMACTRLLE--LEPRNDGAHVLLSN 576
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 125/271 (46%), Gaps = 4/271 (1%)
Query: 54 GMIKPNSLSLTRSLCEFVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDF 113
M + ++++ T L + S + A + M Q D WN +I + G E +
Sbjct: 292 AMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIV 351
Query: 114 YHRMEYE-GIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYF 172
+H ++ + + ++ T + AC ++ + G+ +H + K G+ + +V ++LI MY
Sbjct: 352 FHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYS 411
Query: 173 KFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMIS 232
K G +E + +VF ++ RD+ W+ M+ G + G G +++ F +M KP+ ++ +
Sbjct: 412 KCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTN 471
Query: 233 SLGGCSIGCCVRGGKEIHCQVIRN-GLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTC- 290
CS V + + Q+ N G+ + ++D+ + G ++ A + M
Sbjct: 472 VFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIP 531
Query: 291 KNIVAWNAMIGGYAINGHF-LESFTCLKRMQ 320
+ W A++G I+ + L C + ++
Sbjct: 532 PSTSVWGALLGACKIHANLNLAEMACTRLLE 562
>AT2G27610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:11783927-11786533 REVERSE
Length = 868
Score = 423 bits (1088), Expect = e-118, Method: Compositional matrix adjust.
Identities = 243/729 (33%), Positives = 400/729 (54%), Gaps = 19/729 (2%)
Query: 82 LFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLS 141
+F++M + + W +I G++ + EV+ + RM+ EG ++FTF +
Sbjct: 150 VFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGV 209
Query: 142 FIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNG 201
G +VH ++K GLD+ I V NSLI++Y K G V A +F+ ++ +V+WN M++G
Sbjct: 210 GGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISG 269
Query: 202 YRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELD 261
Y G L++L F M + S S + C+ +R +++HC V++ G D
Sbjct: 270 YAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFD 329
Query: 262 IMVQTSLIDMYAKCGKVDYAERVFNEMTC-KNIVAWNAMIGGYAINGHFLESFTCLKRMQ 320
++T+L+ Y+KC + A R+F E+ C N+V+W AMI G+ N E+ M+
Sbjct: 330 QNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMK 389
Query: 321 EDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLK 380
+ P+ T +L + ++ +H ++ + + TAL+D Y K G+++
Sbjct: 390 RKGVRPNEFTYSVILTALP----VISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVE 445
Query: 381 FAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYA 440
A VF I++K++V+W+A++A Y Q G E A+++F L +KP+ T +SIL A
Sbjct: 446 EAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCA 505
Query: 441 EL-ATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWN 499
A++ + KQ H + K L S+ S+A++ MYAK G++++A F K+LVSWN
Sbjct: 506 ATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWN 565
Query: 500 TMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMD 559
+MI YA HG ++ +F MK+ ++ + TF+ + ++C+ +GLV EG + F+ M D
Sbjct: 566 SMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRD 625
Query: 560 YNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTASRNNNDIFFAEF 619
I EH CMVDL R G L+ A + IE MP + IW ++L A R +
Sbjct: 626 CKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRL 685
Query: 620 AAKHILSHDNDNTGCYVLLANMYAEAGRWEDVEQIKLVMKKKGLAKTVDCCTVESKGKSQ 679
AA+ I++ +++ YVLL+NMYAE+G W++ +++ +M ++ + K +E K K+
Sbjct: 686 AAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTY 745
Query: 680 KFINNNKSH---QQAYMIYDVLDIILKKIG---EDVYIHSLSKFRPADVIKKKMKSPQNH 733
F+ ++SH Q YM + L LK +G + Y+ + D K+ Q H
Sbjct: 746 SFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYV-----LQDIDDEHKEAVLAQ-H 799
Query: 734 SVKLAICFGLISTAIGKPIIIRKNTRICKDCHIAAKKISRVTKREIIVGDSKIFHHF-ED 792
S +LAI FGLI+T G P++I KN R+C DCH+ K I+++ +REI+V DS FHHF D
Sbjct: 800 SERLAIAFGLIATPKGSPLLIIKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSD 859
Query: 793 GRCSCGDYW 801
G CSCGD+W
Sbjct: 860 GVCSCGDFW 868
Score = 237 bits (605), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 156/557 (28%), Positives = 279/557 (50%), Gaps = 13/557 (2%)
Query: 56 IKPNSLSLTRSLC-EFVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFY 114
I N ++ R C V S + NA LF+K D + ++ GFS G QE +
Sbjct: 22 IYANGVAQVRIYCFGTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLF 81
Query: 115 HRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKF 174
+ G+ +D F V+K L + G+++H + IK G D+ V SL+D Y K
Sbjct: 82 LNIHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKG 141
Query: 175 GFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSL 234
+ KVF+ M R++V+W +++GY + L F M G +P+ + ++L
Sbjct: 142 SNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAAL 201
Query: 235 GGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIV 294
G + G ++H V++NGL+ I V SLI++Y KCG V A +F++ K++V
Sbjct: 202 GVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVV 261
Query: 295 AWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYA 354
WN+MI GYA NG LE+ M+ + + + +++ C+ L + +H
Sbjct: 262 TWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSV 321
Query: 355 IRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRIN-EKNMVSWNAIIAAYVQNGRNEEA 413
++ FL + TAL+ Y KC + A +F I N+VSW A+I+ ++QN EEA
Sbjct: 322 VKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEA 381
Query: 414 LELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYM 473
++LF ++ + ++P+ T + IL A L +S ++HA + K ++ A++
Sbjct: 382 VDLFSEMKRKGVRPNEFTYSVILTA---LPVISP-SEVHAQVVKTNYERSSTVGTALLDA 437
Query: 474 YAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTF 533
Y K G ++ A + F + K++V+W+ M+ YA G +I++F + + GI+PNE TF
Sbjct: 438 YVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTF 497
Query: 534 VSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIE--- 590
S+L+ C+ + + F+ + +D + ++ + + GN+++A++ +
Sbjct: 498 SSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQR 557
Query: 591 EMPLVPTARIWGSLLTA 607
E LV W S+++
Sbjct: 558 EKDLVS----WNSMISG 570
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 108/230 (46%), Gaps = 2/230 (0%)
Query: 382 AECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAE 441
A +F + ++ S+ +++ + ++GR +EA LF + ++ D +S+L A
Sbjct: 46 AHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSAT 105
Query: 442 LATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTM 501
L +Q+H K + ++V Y K + + R+ FD M +N+V+W T+
Sbjct: 106 LCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTL 165
Query: 502 IMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYN 561
I YA + + LF RM+ G +PN TF + L + G+ G ++ +++ +
Sbjct: 166 ISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQV-HTVVVKNG 224
Query: 562 IDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTASRNN 611
+D I +++L + GN+ A+ ++ V + W S+++ N
Sbjct: 225 LDKTIPVSNSLINLYLKCGNVRKARILFDKTE-VKSVVTWNSMISGYAAN 273
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 61/125 (48%), Gaps = 5/125 (4%)
Query: 67 LCEFVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDN 126
L + G +++A +F++ + D WN +I G++ G + +D + M+ + +D
Sbjct: 537 LTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDG 596
Query: 127 FTFPFVIKACGRLLSFIEGKKVHGKLI---KIGLDRDIYVCNSLIDMYFKFGFVEVAEKV 183
TF V AC EG+K ++ KI ++ C ++D+Y + G +E A KV
Sbjct: 597 VTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSC--MVDLYSRAGQLEKAMKV 654
Query: 184 FEAMP 188
E MP
Sbjct: 655 IENMP 659
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD
Length = 743
Score = 420 bits (1080), Expect = e-117, Method: Compositional matrix adjust.
Identities = 242/709 (34%), Positives = 379/709 (53%), Gaps = 37/709 (5%)
Query: 125 DNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVF 184
+ F + ++ A + S ++V ++ + +++ N+L+ Y K G + E F
Sbjct: 40 ETFLYNNIVHAYALMKSSTYARRVFDRIPQ----PNLFSWNNLLLAYSKAGLISEMESTF 95
Query: 185 EAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEML-GLGEKPDRLSMISSLGGCSIGCCV 243
E +P RD V+WN ++ GY + G ++ + M+ R+++++ L S V
Sbjct: 96 EKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHV 155
Query: 244 RGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIV--------- 294
GK+IH QVI+ G E ++V + L+ MYA G + A++VF + +N V
Sbjct: 156 SLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGL 215
Query: 295 ---------------------AWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMIN 333
+W AMI G A NG E+ C + M+ L D +
Sbjct: 216 LACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGS 275
Query: 334 LLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKN 393
+LP+C G + EGK IH IR F H+ + +AL+DMY KC L +A+ VF R+ +KN
Sbjct: 276 VLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKN 335
Query: 394 MVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHA 453
+VSW A++ Y Q GR EEA+++F ++ + PD T+ + A A ++++ E Q H
Sbjct: 336 VVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHG 395
Query: 454 YITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTI 513
L SN++V +Y KCGD+ + R F+ M+ ++ VSW M+ AYA G
Sbjct: 396 KAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVE 455
Query: 514 SIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMV 573
+IQLF +M Q+G++P+ T ++S+CS +GLV +G F M +Y I I HY CM+
Sbjct: 456 TIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMI 515
Query: 574 DLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTASRNNNDIFFAEFAAKHILSHDNDNTG 633
DL R+G L+ A +FI MP P A W +LL+A RN ++ ++AA+ ++ D +
Sbjct: 516 DLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPA 575
Query: 634 CYVLLANMYAEAGRWEDVEQIKLVMKKKGLAKTVDCCTVESKGKSQKFINNNKSHQQAYM 693
Y LL+++YA G+W+ V Q++ M++K + K ++ KGK F +++S
Sbjct: 576 GYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFSADDESSPYLDQ 635
Query: 694 IYDVLDIILKKIGEDVYIHSLSKFRPADVIKK-KMKSPQNHSVKLAICFGLISTAIGKPI 752
IY L+ + KI ++ Y S F DV + K+K HS +LAI FGLI G+PI
Sbjct: 636 IYAKLEELNNKIIDNGYKPDTS-FVHHDVEEAVKVKMLNYHSERLAIAFGLIFVPSGQPI 694
Query: 753 IIRKNTRICKDCHIAAKKISRVTKREIIVGDSKIFHHFEDGRCSCGDYW 801
+ KN R+C DCH A K IS VT REI+V D+ FH F+DG CSCGD+W
Sbjct: 695 RVGKNLRVCVDCHNATKHISSVTGREILVRDAVRFHRFKDGTCSCGDFW 743
Score = 224 bits (572), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 145/516 (28%), Positives = 247/516 (47%), Gaps = 35/516 (6%)
Query: 57 KPNSLSLTRSLCEFVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHR 116
+PN S L + +G + FEK+ D WNV+I G+S GL + Y+
Sbjct: 69 QPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNT 128
Query: 117 MEYE-GIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFG 175
M + + T ++K GK++HG++IK+G + + V + L+ MY G
Sbjct: 129 MMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVG 188
Query: 176 FVEVAEKVF-------------------------EAMPL-----RDLVSWNCMVNGYRVI 205
+ A+KVF +A+ L +D VSW M+ G
Sbjct: 189 CISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQN 248
Query: 206 GDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQ 265
G +++ CF+EM G K D+ S L C + GK+IH +IR + I V
Sbjct: 249 GLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVG 308
Query: 266 TSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLI 325
++LIDMY KC + YA+ VF+ M KN+V+W AM+ GY G E+ MQ +
Sbjct: 309 SALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGID 368
Query: 326 PDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECV 385
PD T+ + +C+ +L EG HG AI + ++ + +LV +YGKCG + + +
Sbjct: 369 PDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRL 428
Query: 386 FGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATV 445
F +N ++ VSW A+++AY Q GR E ++LF + LKPD VT+ ++ A + V
Sbjct: 429 FNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLV 488
Query: 446 SECKQIHAYIT-KLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSF-KNLVSWNTMIM 503
+ ++ +T + + + + ++ ++++ G L+ A R+ + M F + + W T++
Sbjct: 489 EKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLS 548
Query: 504 AYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSS 539
A G + I ++ ++P+ +LLSS
Sbjct: 549 --ACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSS 582
Score = 187 bits (476), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 104/365 (28%), Positives = 194/365 (53%), Gaps = 7/365 (1%)
Query: 54 GMIKPNSLSLTRSLCEFVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDF 113
G+ N++ + + G +++AL LF M + D+ W +I+G + GL +E I+
Sbjct: 199 GLDDRNTVMYNSLMGGLLACGMIEDALQLFRGM-EKDSVSWAAMIKGLAQNGLAKEAIEC 257
Query: 114 YHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFK 173
+ M+ +G+ +D + F V+ ACG L + EGK++H +I+ IYV ++LIDMY K
Sbjct: 258 FREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCK 317
Query: 174 FGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISS 233
+ A+ VF+ M +++VSW MV GY G +++ F +M G PD ++ +
Sbjct: 318 CKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQA 377
Query: 234 LGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNI 293
+ C+ + G + H + I +GL + V SL+ +Y KCG +D + R+FNEM ++
Sbjct: 378 ISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDA 437
Query: 294 VAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGY 353
V+W AM+ YA G +E+ +M + L PD +T+ ++ +CS+ G + +G+
Sbjct: 438 VSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKL 497
Query: 354 AIRKM-FLPHLVLETALVDMYGKCGQLKFA-ECVFGRINEKNMVSWNAIIAAYVQNGRNE 411
+ +P + + ++D++ + G+L+ A + G + + W +++A RN+
Sbjct: 498 MTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSAC----RNK 553
Query: 412 EALEL 416
LE+
Sbjct: 554 GNLEI 558
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 66/140 (47%), Gaps = 6/140 (4%)
Query: 449 KQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIH 508
K IH I + TF N IV+ YA ARR FD + NL SWN +++AY+
Sbjct: 26 KMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKA 85
Query: 509 GFGTISIQLFSRMK-QNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIE 567
G + F ++ ++G+ T+ L+ S+SGLV + +N+M D++ +
Sbjct: 86 GLISEMESTFEKLPDRDGV-----TWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRV 140
Query: 568 HYGCMVDLLGRTGNLDAAKQ 587
M+ L G++ KQ
Sbjct: 141 TLMTMLKLSSSNGHVSLGKQ 160
>AT4G33170.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:15995701-15998673 REVERSE
Length = 990
Score = 419 bits (1078), Expect = e-117, Method: Compositional matrix adjust.
Identities = 244/714 (34%), Positives = 392/714 (54%), Gaps = 18/714 (2%)
Query: 101 FSNKGL--------FQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKL 152
F NKGL + ++ + M + D TF ++ ++ S G++VH
Sbjct: 282 FRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMA 341
Query: 153 IKIGLDRDIYVCNSLIDMY---FKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGL 209
+K+GLD + V NSLI+MY KFGF A VF+ M RDL+SWN ++ G G +
Sbjct: 342 LKLGLDLMLTVSNSLINMYCKLRKFGF---ARTVFDNMSERDLISWNSVIAGIAQNGLEV 398
Query: 210 KSLMCFKEMLGLGEKPDRLSMISSL-GGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSL 268
+++ F ++L G KPD+ +M S L S+ + K++H I+ D V T+L
Sbjct: 399 EAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTAL 458
Query: 269 IDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDA 328
ID Y++ + AE +F E ++VAWNAM+ GY + ++ M + D
Sbjct: 459 IDAYSRNRCMKEAEILF-ERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDD 517
Query: 329 ITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGR 388
T+ + +C + +GK +H YAI+ + L + + ++DMY KCG + A+ F
Sbjct: 518 FTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDS 577
Query: 389 INEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSEC 448
I + V+W +I+ ++NG E A +F +R + PD TIA++ A + L + +
Sbjct: 578 IPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQG 637
Query: 449 KQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIH 508
+QIHA KL +++ F ++V MYAKCG + A F + N+ +WN M++ A H
Sbjct: 638 RQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQH 697
Query: 509 GFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEH 568
G G ++QLF +MK GI+P++ TF+ +LS+CS SGLV+E ++ SM DY I IEH
Sbjct: 698 GEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEH 757
Query: 569 YGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTASRNNNDIFFAEFAAKHILSHD 628
Y C+ D LGR G + A+ IE M + +A ++ +LL A R D + A +L +
Sbjct: 758 YSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELE 817
Query: 629 NDNTGCYVLLANMYAEAGRWEDVEQIKLVMKKKGLAKTVDCCTVESKGKSQKFINNNKSH 688
++ YVLL+NMYA A +W++++ + +MK + K +E K K F+ +++S+
Sbjct: 818 PLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSN 877
Query: 689 QQAYMIYDVLDIILKKIGEDVYIHSLSKFRPADV-IKKKMKSPQNHSVKLAICFGLISTA 747
+Q +IY + +++ I ++ Y+ + F DV ++K ++ HS KLA+ FGL+ST
Sbjct: 878 RQTELIYRKVKDMIRDIKQEGYVPE-TDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTP 936
Query: 748 IGKPIIIRKNTRICKDCHIAAKKISRVTKREIIVGDSKIFHHFEDGRCSCGDYW 801
PI + KN R+C DCH A K I++V REI++ D+ FH F+DG CSCGDYW
Sbjct: 937 PSTPIRVIKNLRVCGDCHNAMKYIAKVYNREIVLRDANRFHRFKDGICSCGDYW 990
Score = 196 bits (499), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 154/586 (26%), Positives = 274/586 (46%), Gaps = 54/586 (9%)
Query: 49 ETPKRGMIKPNSLSLTRSLCEFVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGL-- 106
E P+R +I N+L S C G++ A +F+KM D WN I+ ++
Sbjct: 70 ENPERFLI--NNLISMYSKC-----GSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECV 122
Query: 107 ---FQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYV 163
Q+ + + + + T ++K C + HG KIGLD D +V
Sbjct: 123 VENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFV 182
Query: 164 CNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGE 223
+L+++Y KFG V+ + +FE MP RD+V WN M+ Y +G FKE E
Sbjct: 183 AGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMG--------FKE-----E 229
Query: 224 KPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAER 283
D S S G + N + L ++ + S D + G+V
Sbjct: 230 AIDLSSAFHSSG-----------------LNPNEITLRLLARISGDD--SDAGQVKSFAN 270
Query: 284 VFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGT 343
+ + I+ N + Y +G + C M E ++ D +T I +L + K +
Sbjct: 271 GNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDS 330
Query: 344 LLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAA 403
L G+ +H A++ L + +L++MY K + FA VF ++E++++SWN++IA
Sbjct: 331 LALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAG 390
Query: 404 YVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELAT-VSECKQIHAYITKLELSS 462
QNG EA+ LF L LKPD T+ S+L A + L +S KQ+H + K+ S
Sbjct: 391 IAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVS 450
Query: 463 NTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMK 522
++F S A++ Y++ ++ A F+ +F +LV+WN M+ Y G +++LF+ M
Sbjct: 451 DSFVSTALIDAYSRNRCMKEAEILFERHNF-DLVAWNAMMAGYTQSHDGHKTLKLFALMH 509
Query: 523 QNGIEPNESTFVSLLSSCSISGLVNEGWELFN-SMKMDYNIDYGIEHYGCMVDLLGRTGN 581
+ G ++ T ++ +C +N+G ++ ++K Y++D + ++D+ + G+
Sbjct: 510 KQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVS--SGILDMYVKCGD 567
Query: 582 LDAAKQFIEEMPLVPTARIWGSLLTASRNNNDIFFAEFAAKHILSH 627
+ AA+ + +P VP W ++++ N + E A H+ S
Sbjct: 568 MSAAQFAFDSIP-VPDDVAWTTMISGCIENGE----EERAFHVFSQ 608
Score = 177 bits (448), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 115/382 (30%), Positives = 191/382 (50%), Gaps = 15/382 (3%)
Query: 40 SNPTKKQMSETPKRGMIKPNSLSLTRSLCEFVDSGA----MDNALYLFEKMNQPDTYIWN 95
S P +S+ IK N++S + +D+ + M A LFE+ N D WN
Sbjct: 428 SLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERHN-FDLVAWN 486
Query: 96 VIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKI 155
++ G++ + + + M +G D+FT V K CG L + +GK+VH IK
Sbjct: 487 AMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKS 546
Query: 156 GLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCF 215
G D D++V + ++DMY K G + A+ F+++P+ D V+W M++G G+ ++ F
Sbjct: 547 GYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVF 606
Query: 216 KEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKC 275
+M +G PD ++ + S + G++IH ++ D V TSL+DMYAKC
Sbjct: 607 SQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKC 666
Query: 276 GKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLL 335
G +D A +F + NI AWNAM+ G A +G E+ K+M+ + PD +T I +L
Sbjct: 667 GSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVL 726
Query: 336 PSCSKFGTLLEG----KCIHG-YAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRIN 390
+CS G + E + +HG Y I+ P + + L D G+ G +K AE + ++
Sbjct: 727 SACSHSGLVSEAYKHMRSMHGDYGIK----PEIEHYSCLADALGRAGLVKQAENLIESMS 782
Query: 391 -EKNMVSWNAIIAAYVQNGRNE 411
E + + ++AA G E
Sbjct: 783 MEASASMYRTLLAACRVQGDTE 804
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 104/406 (25%), Positives = 185/406 (45%), Gaps = 45/406 (11%)
Query: 145 GKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYR- 203
GK H +++ + + ++ N+LI MY K G + A +VF+ MP RDLVSWN ++ Y
Sbjct: 58 GKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQ 117
Query: 204 ----VIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLE 259
V+ + ++ + F+ + R+++ L C V + H + GL+
Sbjct: 118 SSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLD 177
Query: 260 LDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRM 319
D V +L+++Y K GKV + +F EM +++V WN M+ Y G E+
Sbjct: 178 GDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAF 237
Query: 320 QEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQL 379
L P+ IT+ LL S + GQ+
Sbjct: 238 HSSGLNPNEITL-RLLARISGDDS-------------------------------DAGQV 265
Query: 380 KFAECVFGRINEKNMVS----WNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASI 435
K F N+ + VS N ++ Y+ +G+ L+ F + ++ D VT +
Sbjct: 266 K----SFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILM 321
Query: 436 LPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNL 495
L ++ +++ +Q+H KL L SN+++ MY K AR FD+MS ++L
Sbjct: 322 LATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDL 381
Query: 496 VSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCS 541
+SWN++I A +G ++ LF ++ + G++P++ T S+L + S
Sbjct: 382 ISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAAS 427
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 100/195 (51%), Gaps = 5/195 (2%)
Query: 344 LLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAA 403
L+ GKC H + P L L+ MY KCG L +A VF ++ ++++VSWN+I+AA
Sbjct: 55 LMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAA 114
Query: 404 YVQNGRN-----EEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKL 458
Y Q+ ++A LF LR + +T++ +L V + H Y K+
Sbjct: 115 YAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKI 174
Query: 459 ELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLF 518
L + F + A+V +Y K G ++ + F+ M ++++V WN M+ AY GF +I L
Sbjct: 175 GLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLS 234
Query: 519 SRMKQNGIEPNESTF 533
S +G+ PNE T
Sbjct: 235 SAFHSSGLNPNEITL 249
>AT3G11460.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:3608250-3610121 FORWARD
Length = 623
Score = 419 bits (1077), Expect = e-117, Method: Compositional matrix adjust.
Identities = 209/594 (35%), Positives = 342/594 (57%), Gaps = 8/594 (1%)
Query: 210 KSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLI 269
+S+ ++ ML G PD S L C+ G+++HC V + G E + V T+LI
Sbjct: 36 ESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTALI 95
Query: 270 DMYAKCGKVDYAERVF--NEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPD 327
MY KCG V A +VF N + + V +NA+I GY N ++ +RM+E + D
Sbjct: 96 SMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSVD 155
Query: 328 AITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFG 387
++TM+ L+P C+ L G+ +HG ++ + + + + MY KCG ++ +F
Sbjct: 156 SVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFD 215
Query: 388 RINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSE 447
+ K +++WNA+I+ Y QNG + LEL+ +++ + PD T+ S+L + A L
Sbjct: 216 EMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKI 275
Query: 448 CKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAI 507
++ + N F SNA + MYA+CG+L AR FD M K+LVSW MI Y +
Sbjct: 276 GHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGM 335
Query: 508 HGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIE 567
HG G I + LF M + GI P+ + FV +LS+CS SGL ++G ELF +MK +Y ++ G E
Sbjct: 336 HGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPE 395
Query: 568 HYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTASRNNNDIFFAEFAAKHILSH 627
HY C+VDLLGR G LD A +FIE MP+ P +WG+LL A + + ++ AE A ++
Sbjct: 396 HYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIEF 455
Query: 628 DNDNTGCYVLLANMYAEAGRWEDVEQIKLVMKKKGLAKTVDCCTVESKGKSQKFINNNKS 687
+ +N G YVL++N+Y+++ E + +I+++M+++ K VE KG+ F+ ++S
Sbjct: 456 EPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYVEHKGRVHLFLAGDRS 515
Query: 688 HQQAYMIYDVLDIILKKIGEDVYIHSLSKFRPADVIKKKMKSPQNHSVKLAICFGLISTA 747
H+Q ++ +LD + + E L+ D ++ + + HS +LAI FG++++
Sbjct: 516 HEQTEEVHRMLDELETSVME------LAGNMDCDRGEEVSSTTREHSERLAIAFGILNSI 569
Query: 748 IGKPIIIRKNTRICKDCHIAAKKISRVTKREIIVGDSKIFHHFEDGRCSCGDYW 801
G I++ KN R+C+DCH+ K++S++ R+ +V D+ FH+F+DG CSC DYW
Sbjct: 570 PGTEILVIKNLRVCEDCHVFLKQVSKIVDRQFVVRDASRFHYFKDGVCSCKDYW 623
Score = 216 bits (550), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 128/450 (28%), Positives = 224/450 (49%), Gaps = 6/450 (1%)
Query: 94 WNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLI 153
WNV +R + + LF E I Y M G D F+FPF++K+C L + G+++H +
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 154 KIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVS--WNCMVNGYRVIGDGLKS 211
K G + + +V +LI MY K G V A KVFE P +S +N +++GY +
Sbjct: 81 KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDA 140
Query: 212 LMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDM 271
F+ M G D ++M+ + C++ + G+ +H Q ++ GL+ ++ V S I M
Sbjct: 141 AYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITM 200
Query: 272 YAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITM 331
Y KCG V+ R+F+EM K ++ WNA+I GY+ NG + ++M+ + PD T+
Sbjct: 201 YMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTL 260
Query: 332 INLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINE 391
+++L SC+ G G + F+P++ + A + MY +CG L A VF +
Sbjct: 261 VSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPV 320
Query: 392 KNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQI 451
K++VSW A+I Y +G E L LF + + ++PD +L A + + ++
Sbjct: 321 KSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLEL 380
Query: 452 -HAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFK-NLVSWNTMIMAYAIHG 509
A + +L + +V + + G L A + +SM + + W ++ A IH
Sbjct: 381 FRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHK 440
Query: 510 FGTISIQLFSRMKQNGIEPNESTFVSLLSS 539
++ F+++ + EPN + L+S+
Sbjct: 441 NVDMAELAFAKVIE--FEPNNIGYYVLMSN 468
Score = 154 bits (388), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 99/355 (27%), Positives = 172/355 (48%), Gaps = 4/355 (1%)
Query: 53 RGMIKPNSLSLTRSLCEFVDSGAMDNALYLFEKMNQPD--TYIWNVIIRGFSNKGLFQEV 110
+G + LT + + G + +A +FE+ Q + +N +I G++ +
Sbjct: 81 KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDA 140
Query: 111 IDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDM 170
+ RM+ G+ +D+ T ++ C G+ +HG+ +K GLD ++ V NS I M
Sbjct: 141 AYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITM 200
Query: 171 YFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSM 230
Y K G VE ++F+ MP++ L++WN +++GY G L +++M G PD ++
Sbjct: 201 YMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTL 260
Query: 231 ISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTC 290
+S L C+ + G E+ V NG ++ V + I MYA+CG + A VF+ M
Sbjct: 261 VSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPV 320
Query: 291 KNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCI 350
K++V+W AMIG Y ++G M + + PD + +L +CS G +G +
Sbjct: 321 KSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLEL 380
Query: 351 HGYAIRKMFL-PHLVLETALVDMYGKCGQLKFA-ECVFGRINEKNMVSWNAIIAA 403
R+ L P + LVD+ G+ G+L A E + E + W A++ A
Sbjct: 381 FRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGA 435
>AT4G14820.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:8507794-8510038 REVERSE
Length = 722
Score = 415 bits (1067), Expect = e-116, Method: Compositional matrix adjust.
Identities = 225/628 (35%), Positives = 354/628 (56%), Gaps = 37/628 (5%)
Query: 211 SLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLID 270
+++ ++ + +G + D+ S + L S + G E+H + D V+T +D
Sbjct: 95 TILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMD 154
Query: 271 MYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAIT 330
MYA CG+++YA VF+EM+ +++V WN MI Y G E+F + M++ N++PD +
Sbjct: 155 MYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMI 214
Query: 331 MINLLPSCSKFGTLLEGKCIHGYAI-------------------------------RKMF 359
+ N++ +C + G + + I+ + I RKM
Sbjct: 215 LCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMS 274
Query: 360 LPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHC 419
+ +L + TA+V Y KCG+L A+ +F + +K++V W +I+AYV++ +EAL +F
Sbjct: 275 VRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEE 334
Query: 420 LRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGD 479
+ +KPD V++ S++ A A L + + K +H+ I L S +NA++ MYAKCG
Sbjct: 335 MCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGG 394
Query: 480 LQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSS 539
L R F+ M +N+VSW++MI A ++HG + ++ LF+RMKQ +EPNE TFV +L
Sbjct: 395 LDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYG 454
Query: 540 CSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTAR 599
CS SGLV EG ++F SM +YNI +EHYGCMVDL GR L A + IE MP+
Sbjct: 455 CSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVV 514
Query: 600 IWGSLLTASRNNNDIFFAEFAAKHILSHDNDNTGCYVLLANMYAEAGRWEDVEQIKLVMK 659
IWGSL++A R + ++ +FAAK IL + D+ G VL++N+YA RWEDV I+ VM+
Sbjct: 515 IWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVME 574
Query: 660 KKGLAKTVDCCTVESKGKSQKFINNNKSHQQAYMIYDVLDIILKKIGEDVYIHSLSKFRP 719
+K + K ++ GKS +F+ +K H+Q+ IY LD ++ K+ Y+
Sbjct: 575 EKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLDEVVSKLKLAGYVPDCGSVLV 634
Query: 720 ADVIKKKMKSPQNHSVKLAICFGLISTAIGKP------IIIRKNTRICKDCHIAAKKISR 773
++K HS KLA+CFGL++ + I I KN R+C+DCH+ K +S+
Sbjct: 635 DVEEEEKKDLVLWHSEKLALCFGLMNEEKEEEKDSCGVIRIVKNLRVCEDCHLFFKLVSK 694
Query: 774 VTKREIIVGDSKIFHHFEDGRCSCGDYW 801
V +REIIV D FH +++G CSC DYW
Sbjct: 695 VYEREIIVRDRTRFHCYKNGLCSCRDYW 722
Score = 197 bits (502), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 128/495 (25%), Positives = 237/495 (47%), Gaps = 36/495 (7%)
Query: 79 ALYLFEKM-NQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACG 137
AL +F + + P++ ++N +R S + I FY R+ + G +D F+F ++KA
Sbjct: 63 ALNVFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVS 122
Query: 138 RLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNC 197
++ + EG ++HG KI D +V +DMY G + A VF+ M RD+V+WN
Sbjct: 123 KVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNT 182
Query: 198 MVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNG 257
M+ Y G ++ F+EM PD + + + + C +R + I+ +I N
Sbjct: 183 MIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIEND 242
Query: 258 LELDIMVQTSLIDMYA-------------------------------KCGKVDYAERVFN 286
+ +D + T+L+ MYA KCG++D A+ +F+
Sbjct: 243 VRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFD 302
Query: 287 EMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLE 346
+ K++V W MI Y + + E+ + M + PD ++M +++ +C+ G L +
Sbjct: 303 QTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDK 362
Query: 347 GKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQ 406
K +H L + AL++MY KCG L VF ++ +N+VSW+++I A
Sbjct: 363 AKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSM 422
Query: 407 NGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYIT-KLELSSNTF 465
+G +AL LF ++ + ++P+ VT +L + V E K+I A +T + ++
Sbjct: 423 HGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLE 482
Query: 466 TSNAIVYMYAKCGDLQTARRYFDSMSF-KNLVSWNTMIMAYAIHGFGTISIQLFSRMKQN 524
+V ++ + L+ A +SM N+V W +++ A IH G + + F+ +
Sbjct: 483 HYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIH--GELELGKFAAKRIL 540
Query: 525 GIEPNESTFVSLLSS 539
+EP+ + L+S+
Sbjct: 541 ELEPDHDGALVLMSN 555
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 123/475 (25%), Positives = 209/475 (44%), Gaps = 59/475 (12%)
Query: 8 SYFFNSYKPDDASFKQMGAPKRDLLVNPRIRKSNPTKKQMSETPK-----------RGMI 56
S FN + D + P+ +L RIR Q S P GM
Sbjct: 76 SIVFNPFLRD---LSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGME 132
Query: 57 KPNSLSLTRSLCE-FVDSGAMD---------NALYLFEKMNQPDTYIWNVIIRGFSNKGL 106
+LC+ FV++G MD A +F++M+ D WN +I + GL
Sbjct: 133 LHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGL 192
Query: 107 FQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNS 166
E + M+ + D ++ ACGR + + ++ LI+ + D ++ +
Sbjct: 193 VDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTA 252
Query: 167 LIDMYFKFGFVEVAEKVFEAMPLR-------------------------------DLVSW 195
L+ MY G +++A + F M +R DLV W
Sbjct: 253 LVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCW 312
Query: 196 NCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIR 255
M++ Y ++L F+EM G KPD +SM S + C+ + K +H +
Sbjct: 313 TTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHV 372
Query: 256 NGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTC 315
NGLE ++ + +LI+MYAKCG +D VF +M +N+V+W++MI +++G ++ +
Sbjct: 373 NGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSL 432
Query: 316 LKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKM-FLPHLVLETALVDMYG 374
RM+++N+ P+ +T + +L CS G + EGK I + P L +VD++G
Sbjct: 433 FARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFG 492
Query: 375 KCGQLKFA-ECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPD 428
+ L+ A E + N+V W ++++A +G E L F R L+PD
Sbjct: 493 RANLLREALEVIESMPVASNVVIWGSLMSACRIHGELE--LGKFAAKRILELEPD 545
>AT5G27110.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:9538572-9540647 REVERSE
Length = 691
Score = 409 bits (1050), Expect = e-114, Method: Compositional matrix adjust.
Identities = 216/627 (34%), Positives = 363/627 (57%), Gaps = 3/627 (0%)
Query: 78 NALYLFEKMN-QPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGI-DNFTFPFVIKA 135
+A ++FE + + D YIWN ++ G+S +F + ++ + R+ I + D+FTFP VIKA
Sbjct: 57 SARHVFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKA 116
Query: 136 CGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSW 195
G L G+ +H ++K G D+ V +SL+ MY KF E + +VF+ MP RD+ SW
Sbjct: 117 YGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASW 176
Query: 196 NCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIR 255
N +++ + G+ K+L F M G +P+ +S+ ++ CS + GKEIH + ++
Sbjct: 177 NTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVK 236
Query: 256 NGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTC 315
G ELD V ++L+DMY KC ++ A VF +M K++VAWN+MI GY G
Sbjct: 237 KGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEI 296
Query: 316 LKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGK 375
L RM + P T+ ++L +CS+ LL GK IHGY IR + + + +L+D+Y K
Sbjct: 297 LNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFK 356
Query: 376 CGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASI 435
CG+ AE VF + + SWN +I++Y+ G +A+E++ + + +KPD VT S+
Sbjct: 357 CGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSV 416
Query: 436 LPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNL 495
LPA ++LA + + KQIH I++ L ++ +A++ MY+KCG+ + A R F+S+ K++
Sbjct: 417 LPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDV 476
Query: 496 VSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNS 555
VSW MI AY HG ++ F M++ G++P+ T +++LS+C +GL++EG + F+
Sbjct: 477 VSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQ 536
Query: 556 MKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVP-TARIWGSLLTASRNNNDI 614
M+ Y I+ IEHY CM+D+LGR G L A + I++ P A + +L +A + +
Sbjct: 537 MRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEH 596
Query: 615 FFAEFAAKHILSHDNDNTGCYVLLANMYAEAGRWEDVEQIKLVMKKKGLAKTVDCCTVES 674
+ A+ ++ + D+ Y++L N+YA W+ +++L MK+ GL K C +E
Sbjct: 597 SLGDRIARLLVENYPDDASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSWIEM 656
Query: 675 KGKSQKFINNNKSHQQAYMIYDVLDII 701
K F ++SH +A +Y+ L ++
Sbjct: 657 SDKVCHFFAEDRSHLRAENVYECLALL 683
Score = 242 bits (618), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 132/371 (35%), Positives = 204/371 (54%)
Query: 77 DNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKAC 136
+N+L +F++M + D WN +I F G ++ ++ + RME G ++ + I AC
Sbjct: 159 ENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISAC 218
Query: 137 GRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWN 196
RLL GK++H K +K G + D YV ++L+DMY K +EVA +VF+ MP + LV+WN
Sbjct: 219 SRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWN 278
Query: 197 CMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRN 256
M+ GY GD + M+ G +P + ++ S L CS + GK IH VIR+
Sbjct: 279 SMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRS 338
Query: 257 GLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCL 316
+ DI V SLID+Y KCG+ + AE VF++ +WN MI Y G++ ++
Sbjct: 339 VVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVY 398
Query: 317 KRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKC 376
+M + PD +T ++LP+CS+ L +GK IH +L +AL+DMY KC
Sbjct: 399 DQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKC 458
Query: 377 GQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASIL 436
G K A +F I +K++VSW +I+AY +G+ EAL F ++ LKPD VT+ ++L
Sbjct: 459 GNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVL 518
Query: 437 PAYAELATVSE 447
A + E
Sbjct: 519 SACGHAGLIDE 529
Score = 201 bits (510), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 125/452 (27%), Positives = 236/452 (52%), Gaps = 7/452 (1%)
Query: 146 KKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLR-DLVSWNCMVNGYRV 204
K VH +++ +GL RD+ +C SLI++YF A VFE +R D+ WN +++GY
Sbjct: 24 KLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSK 83
Query: 205 IGDGLKSLMCFKEMLGLGE-KPDRLSMISSLGGCSIGCCVRG--GKEIHCQVIRNGLELD 261
+L FK +L PD + + + + G R G+ IH V+++G D
Sbjct: 84 NSMFHDTLEVFKRLLNCSICVPDSFTFPNVIK--AYGALGREFLGRMIHTLVVKSGYVCD 141
Query: 262 IMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQE 321
++V +SL+ MYAK + + +VF+EM +++ +WN +I + +G ++ RM+
Sbjct: 142 VVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMES 201
Query: 322 DNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKF 381
P+++++ + +CS+ L GK IH ++K F + +ALVDMYGKC L+
Sbjct: 202 SGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEV 261
Query: 382 AECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAE 441
A VF ++ K++V+WN++I YV G ++ +E+ + + + +P T+ SIL A +
Sbjct: 262 AREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSR 321
Query: 442 LATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTM 501
+ K IH Y+ + ++++ + + +++ +Y KCG+ A F SWN M
Sbjct: 322 SRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVM 381
Query: 502 IMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYN 561
I +Y G +++++ +M G++P+ TF S+L +CS + +G ++ S+ +
Sbjct: 382 ISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSIS-ESR 440
Query: 562 IDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMP 593
++ ++D+ + GN A + +P
Sbjct: 441 LETDELLLSALLDMYSKCGNEKEAFRIFNSIP 472
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 103/323 (31%), Positives = 171/323 (52%), Gaps = 10/323 (3%)
Query: 67 LCEFVDSGAMDN---------ALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRM 117
L E+V+S +D A +F+KM + WN +I+G+ KG + ++ +RM
Sbjct: 241 LDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRM 300
Query: 118 EYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFV 177
EG T ++ AC R + + GK +HG +I+ ++ DIYV SLID+YFK G
Sbjct: 301 IIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEA 360
Query: 178 EVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGC 237
+AE VF SWN M++ Y +G+ K++ + +M+ +G KPD ++ S L C
Sbjct: 361 NLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPAC 420
Query: 238 SIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWN 297
S + GK+IH + + LE D ++ ++L+DMY+KCG A R+FN + K++V+W
Sbjct: 421 SQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWT 480
Query: 298 AMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEG-KCIHGYAIR 356
MI Y +G E+ MQ+ L PD +T++ +L +C G + EG K +
Sbjct: 481 VMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSK 540
Query: 357 KMFLPHLVLETALVDMYGKCGQL 379
P + + ++D+ G+ G+L
Sbjct: 541 YGIEPIIEHYSCMIDILGRAGRL 563
>AT3G46790.1 | Symbols: CRR2 | CRR2 (CHLORORESPIRATORY REDUCTION 2)
| chr3:17231975-17233948 REVERSE
Length = 657
Score = 407 bits (1047), Expect = e-113, Method: Compositional matrix adjust.
Identities = 213/559 (38%), Positives = 327/559 (58%), Gaps = 6/559 (1%)
Query: 249 IHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGH 308
+H ++ NG + D + T LI MY+ G VDYA +VF++ + I WNA+ + GH
Sbjct: 99 VHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGH 158
Query: 309 FLESFTCLKRMQEDNLIPDAITMINLLPSC----SKFGTLLEGKCIHGYAIRKMFLPHLV 364
E +M + D T +L +C L++GK IH + R+ + H+
Sbjct: 159 GEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVY 218
Query: 365 LETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQT 424
+ T LVDMY + G + +A VFG + +N+VSW+A+IA Y +NG+ EAL F + +T
Sbjct: 219 IMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRET 278
Query: 425 --LKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQT 482
P++VT+ S+L A A LA + + K IH YI + L S +A+V MY +CG L+
Sbjct: 279 KDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEV 338
Query: 483 ARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSI 542
+R FD M +++VSWN++I +Y +HG+G +IQ+F M NG P TFVS+L +CS
Sbjct: 339 GQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSH 398
Query: 543 SGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWG 602
GLV EG LF +M D+ I IEHY CMVDLLGR LD A + +++M P ++WG
Sbjct: 399 EGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWG 458
Query: 603 SLLTASRNNNDIFFAEFAAKHILSHDNDNTGCYVLLANMYAEAGRWEDVEQIKLVMKKKG 662
SLL + R + ++ AE A++ + + + N G YVLLA++YAEA W++V+++K +++ +G
Sbjct: 459 SLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRG 518
Query: 663 LAKTVDCCTVESKGKSQKFINNNKSHQQAYMIYDVLDIILKKIGEDVYIHSLSKFRPADV 722
L K C +E + K F++ ++ + I+ L + + + E YI
Sbjct: 519 LQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKEKGYIPQTKGVLYELE 578
Query: 723 IKKKMKSPQNHSVKLAICFGLISTAIGKPIIIRKNTRICKDCHIAAKKISRVTKREIIVG 782
++K + HS KLA+ FGLI+T+ G+PI I KN R+C+DCH+ K IS+ ++EI+V
Sbjct: 579 TEEKERIVLGHSEKLALAFGLINTSKGEPIRITKNLRLCEDCHLFTKFISKFMEKEILVR 638
Query: 783 DSKIFHHFEDGRCSCGDYW 801
D FH F++G CSCGDYW
Sbjct: 639 DVNRFHRFKNGVCSCGDYW 657
Score = 210 bits (535), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 115/363 (31%), Positives = 195/363 (53%), Gaps = 10/363 (2%)
Query: 95 NVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIK 154
N +I+ +G ++ I R+ + T+ +I CG S + +VH ++
Sbjct: 50 NQLIQSLCKEGKLKQAI----RVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRHILD 105
Query: 155 IGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMC 214
G D+D ++ LI MY G V+ A KVF+ R + WN + + G G + L
Sbjct: 106 NGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGL 165
Query: 215 FKEMLGLGEKPDRLSMISSLGGCSIGCC----VRGGKEIHCQVIRNGLELDIMVQTSLID 270
+ +M +G + DR + L C C + GKEIH + R G + + T+L+D
Sbjct: 166 YWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVD 225
Query: 271 MYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQED--NLIPDA 328
MYA+ G VDYA VF M +N+V+W+AMI YA NG E+ + M + + P++
Sbjct: 226 MYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNS 285
Query: 329 ITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGR 388
+TM+++L +C+ L +GK IHGY +R+ L + +ALV MYG+CG+L+ + VF R
Sbjct: 286 VTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDR 345
Query: 389 INEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSEC 448
++++++VSWN++I++Y +G ++A+++F + P VT S+L A + V E
Sbjct: 346 MHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEG 405
Query: 449 KQI 451
K++
Sbjct: 406 KRL 408
Score = 195 bits (496), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 105/358 (29%), Positives = 195/358 (54%), Gaps = 8/358 (2%)
Query: 64 TRSLCEFVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIG 123
T+ + + D G++D A +F+K + Y+WN + R + G +EV+ Y +M G+
Sbjct: 116 TKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVE 175
Query: 124 IDNFTFPFVIKAC----GRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEV 179
D FT+ +V+KAC + ++GK++H L + G +Y+ +L+DMY +FG V+
Sbjct: 176 SDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDY 235
Query: 180 AEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEML--GLGEKPDRLSMISSLGGC 237
A VF MP+R++VSW+ M+ Y G ++L F+EM+ P+ ++M+S L C
Sbjct: 236 ASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQAC 295
Query: 238 SIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWN 297
+ + GK IH ++R GL+ + V ++L+ MY +CGK++ +RVF+ M +++V+WN
Sbjct: 296 ASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWN 355
Query: 298 AMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRK 357
++I Y ++G+ ++ + M + P +T +++L +CS G + EGK + R
Sbjct: 356 SLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRD 415
Query: 358 MFL-PHLVLETALVDMYGKCGQL-KFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEA 413
+ P + +VD+ G+ +L + A+ V E W +++ + +G E A
Sbjct: 416 HGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELA 473
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/269 (20%), Positives = 119/269 (44%), Gaps = 14/269 (5%)
Query: 395 VSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAY 454
+S N +I + + G+ ++A+ + +Q P T ++ +++S+ ++H +
Sbjct: 47 ISNNQLIQSLCKEGKLKQAIRVL----SQESSPSQQTYELLILCCGHRSSLSDALRVHRH 102
Query: 455 ITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTIS 514
I + F + ++ MY+ G + AR+ FD + + WN + A + G G
Sbjct: 103 ILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEV 162
Query: 515 IQLFSRMKQNGIEPNESTFVSLL-----SSCSISGLVNEGWELFNSM-KMDYNIDYGIEH 568
+ L+ +M + G+E + T+ +L S C+++ L+ +G E+ + + Y+ I
Sbjct: 163 LGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLM-KGKEIHAHLTRRGYSSHVYI-- 219
Query: 569 YGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTASRNNNDIFFAEFAAKHILSHD 628
+VD+ R G +D A MP V W +++ N F A + ++
Sbjct: 220 MTTLVDMYARFGCVDYASYVFGGMP-VRNVVSWSAMIACYAKNGKAFEALRTFREMMRET 278
Query: 629 NDNTGCYVLLANMYAEAGRWEDVEQIKLV 657
D++ V + ++ +EQ KL+
Sbjct: 279 KDSSPNSVTMVSVLQACASLAALEQGKLI 307
>AT3G02010.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:337965-340442 FORWARD
Length = 825
Score = 405 bits (1040), Expect = e-113, Method: Compositional matrix adjust.
Identities = 236/781 (30%), Positives = 398/781 (50%), Gaps = 12/781 (1%)
Query: 28 KRDLLVNPRIRKS--NPTKKQMSETPKRGMIKPNSLSLTRSLCEFVDSGAMDNALYLFEK 85
+ + +V +R+ + +K E P + + N++ + V +G + +A LF+
Sbjct: 50 RSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTM-----ISGHVKTGDVSSARDLFDA 104
Query: 86 MNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRM--EYEGIGIDNFTFPFVIKACGRLLSFI 143
M W +++ ++ F E + +M D+ TF ++ C +
Sbjct: 105 MPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQN 164
Query: 144 EGKKVHGKLIKIGLDRDIY--VCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNG 201
+VH +K+G D + + V N L+ Y + +++A +FE +P +D V++N ++ G
Sbjct: 165 AVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITG 224
Query: 202 YRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELD 261
Y G +S+ F +M G +P + L G+++H + G D
Sbjct: 225 YEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRD 284
Query: 262 IMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQE 321
V ++D Y+K +V +F+EM + V++N +I Y+ + S + MQ
Sbjct: 285 ASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQC 344
Query: 322 DNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKF 381
+L + +L G+ +H A+ L + +LVDMY KC +
Sbjct: 345 MGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEE 404
Query: 382 AECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAE 441
AE +F + ++ VSW A+I+ YVQ G + L+LF +R L+ D T A++L A A
Sbjct: 405 AELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASAS 464
Query: 442 LATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTM 501
A++ KQ+HA+I + N F+ + +V MYAKCG ++ A + F+ M +N VSWN +
Sbjct: 465 FASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNAL 524
Query: 502 IMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYN 561
I A+A +G G +I F++M ++G++P+ + + +L++CS G V +G E F +M Y
Sbjct: 525 ISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYG 584
Query: 562 IDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTASRNNNDIFFAEFAA 621
I +HY CM+DLLGR G A++ ++EMP P +W S+L A R + + AE AA
Sbjct: 585 ITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAA 644
Query: 622 KHILSHDN-DNTGCYVLLANMYAEAGRWEDVEQIKLVMKKKGLAKTVDCCTVESKGKSQK 680
+ + S + + YV ++N+YA AG WE V +K M+++G+ K VE K
Sbjct: 645 EKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHV 704
Query: 681 FINNNKSHQQAYMIYDVLDIILKKIGEDVYIHSLSKFRPADVIKKKMKSPQNHSVKLAIC 740
F +N+++H I ++ + +I + Y S + K++S + HS +LA+
Sbjct: 705 FSSNDQTHPNGDEIVRKINELTAEIEREGYKPDTSSVVQDVDEQMKIESLKYHSERLAVA 764
Query: 741 FGLISTAIGKPIIIRKNTRICKDCHIAAKKISRVTKREIIVGDSKIFHHFEDGRCSCGDY 800
F LIST G PI++ KN R C+DCH A K IS++ KREI V D+ FHHF +G CSCGDY
Sbjct: 765 FALISTPEGCPIVVMKNLRACRDCHAAIKLISKIVKREITVRDTSRFHHFSEGVCSCGDY 824
Query: 801 W 801
W
Sbjct: 825 W 825
>AT4G21300.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:11336479-11339052 FORWARD
Length = 857
Score = 405 bits (1040), Expect = e-113, Method: Compositional matrix adjust.
Identities = 225/672 (33%), Positives = 379/672 (56%), Gaps = 11/672 (1%)
Query: 70 FVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTF 129
+++ G +D LF+++ Q D IWNV++ G++ G VI + M + I + TF
Sbjct: 183 YLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTF 242
Query: 130 PFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPL 189
V+ C L G ++HG ++ G+D + + NSL+ MY K G + A K+F M
Sbjct: 243 DCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSR 302
Query: 190 RDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEI 249
D V+WNCM++GY G +SL F EM+ G PD ++ S L S + K+I
Sbjct: 303 ADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQI 362
Query: 250 HCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHF 309
HC ++R+ + LDI + ++LID Y KC V A+ +F++ ++V + AMI GY NG +
Sbjct: 363 HCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLY 422
Query: 310 LESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETAL 369
++S + + + + P+ IT++++LP L G+ +HG+ I+K F + A+
Sbjct: 423 IDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAV 482
Query: 370 VDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDA 429
+DMY KCG++ A +F R++++++VSWN++I Q+ A+++F + + D
Sbjct: 483 IDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDC 542
Query: 430 VTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDS 489
V+I++ L A A L + S K IH ++ K L+S+ ++ + ++ MYAKCG+L+ A F +
Sbjct: 543 VSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKT 602
Query: 490 MSFKNLVSWNTMIMAYAIHGFGTISIQLFSRM-KQNGIEPNESTFVSLLSSCSISGLVNE 548
M KN+VSWN++I A HG S+ LF M +++GI P++ TF+ ++SSC G V+E
Sbjct: 603 MKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDE 662
Query: 549 GWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTAS 608
G F SM DY I EHY C+VDL GR G L A + ++ MP P A +WG+LL A
Sbjct: 663 GVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGAC 722
Query: 609 RNNNDIFFAEFAAKHILSHDNDNTGCYVLLANMYAEAGRWEDVEQIKLVMKKKGLAKTVD 668
R + ++ AE A+ ++ D N+G YVL++N +A A WE V +++ +MK++ + K
Sbjct: 723 RLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKEREVQKIPG 782
Query: 669 CCTVESKGKSQKFINNNKSHQQAYMIYDVLDIILKKIGEDVYI---------HSLSKFRP 719
+E ++ F++ + +H ++ IY +L+ +L ++ + YI S K P
Sbjct: 783 YSWIEINKRTHLFVSGDVNHPESSHIYSLLNSLLGELRLEGYIPQPYLPLHPESSRKVYP 842
Query: 720 AD-VIKKKMKSP 730
I+K+M+ P
Sbjct: 843 VSRFIEKEMRDP 854
Score = 263 bits (671), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 165/547 (30%), Positives = 279/547 (51%), Gaps = 8/547 (1%)
Query: 69 EFVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFT 128
F D G M L L +P WN II F GL + + FY +M G+ D T
Sbjct: 85 SFSDCGKMFYRLDLRRSSIRP----WNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVST 140
Query: 129 FPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMP 188
FP ++KAC L +F + + +G+D + +V +SLI Y ++G ++V K+F+ +
Sbjct: 141 FPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVL 200
Query: 189 LRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKE 248
+D V WN M+NGY G + F M P+ ++ L C+ + G +
Sbjct: 201 QKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQ 260
Query: 249 IHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGH 308
+H V+ +G++ + ++ SL+ MY+KCG+ D A ++F M+ + V WN MI GY +G
Sbjct: 261 LHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGL 320
Query: 309 FLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETA 368
ES T M ++PDAIT +LLPS SKF L K IH Y +R + L +A
Sbjct: 321 MEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSA 380
Query: 369 LVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPD 428
L+D Y KC + A+ +F + N ++V + A+I+ Y+ NG ++LE+F L + P+
Sbjct: 381 LIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPN 440
Query: 429 AVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFD 488
+T+ SILP L + +++H +I K + A++ MYAKCG + A F+
Sbjct: 441 EITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFE 500
Query: 489 SMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNE 548
+S +++VSWN+MI A + +I +F +M +GI + + + LS+C + L +E
Sbjct: 501 RLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSAC--ANLPSE 558
Query: 549 GW-ELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTA 607
+ + + + +++ + ++D+ + GNL AA + M W S++ A
Sbjct: 559 SFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVS-WNSIIAA 617
Query: 608 SRNNNDI 614
N+ +
Sbjct: 618 CGNHGKL 624
Score = 218 bits (555), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 136/489 (27%), Positives = 256/489 (52%), Gaps = 11/489 (2%)
Query: 54 GMIKPNSLSLTRSLCEFVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDF 113
G IK + LS+ + G D+A LF M++ DT WN +I G+ GL +E + F
Sbjct: 274 GSIKNSLLSM------YSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTF 327
Query: 114 YHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFK 173
++ M G+ D TF ++ + + + K++H +++ + DI++ ++LID YFK
Sbjct: 328 FYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFK 387
Query: 174 FGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISS 233
V +A+ +F D+V + M++GY G + SL F+ ++ + P+ ++++S
Sbjct: 388 CRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSI 447
Query: 234 LGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNI 293
L I ++ G+E+H +I+ G + + ++IDMYAKCG+++ A +F ++ ++I
Sbjct: 448 LPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDI 507
Query: 294 VAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGY 353
V+WN+MI A + + + ++M + D +++ L +C+ + GK IHG+
Sbjct: 508 VSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGF 567
Query: 354 AIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEA 413
I+ + E+ L+DMY KCG LK A VF + EKN+VSWN+IIAA +G+ +++
Sbjct: 568 MIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDS 627
Query: 414 LELFHCLRNQT-LKPDAVTIASILPAYAELATVSECKQIHAYITK-LELSSNTFTSNAIV 471
L LFH + ++ ++PD +T I+ + + V E + +T+ + +V
Sbjct: 628 LCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVV 687
Query: 472 YMYAKCGDLQTARRYFDSMSF-KNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNE 530
++ + G L A SM F + W T++ A +H + + + K ++P+
Sbjct: 688 DLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLH--KNVELAEVASSKLMDLDPSN 745
Query: 531 STFVSLLSS 539
S + L+S+
Sbjct: 746 SGYYVLISN 754
Score = 187 bits (474), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 133/487 (27%), Positives = 235/487 (48%), Gaps = 22/487 (4%)
Query: 131 FVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLR 190
+++AC +GK+VH LI + D Y ++ MY G K+F + LR
Sbjct: 40 LLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLR 99
Query: 191 --DLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCV----- 243
+ WN +++ + G ++L + +ML G PD S C + CV
Sbjct: 100 RSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPD-----VSTFPCLVKACVALKNF 154
Query: 244 RGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGY 303
+G + V G++ + V +SLI Y + GK+D ++F+ + K+ V WN M+ GY
Sbjct: 155 KGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGY 214
Query: 304 AINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHL 363
A G M+ D + P+A+T +L C+ + G +HG +
Sbjct: 215 AKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEG 274
Query: 364 VLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQ 423
++ +L+ MY KCG+ A +F ++ + V+WN +I+ YVQ+G EE+L F+ + +
Sbjct: 275 SIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISS 334
Query: 424 TLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTA 483
+ PDA+T +S+LP+ ++ + CKQIH YI + +S + F ++A++ Y KC + A
Sbjct: 335 GVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMA 394
Query: 484 RRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSIS 543
+ F + ++V + MI Y +G S+++F + + I PNE T VS+L I
Sbjct: 395 QNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGIL 454
Query: 544 GLVNEGWELFNSMKMDYNIDYGIE---HYGC-MVDLLGRTGNLDAAKQFIEEMPLVPTAR 599
+ G EL + I G + + GC ++D+ + G ++ A + E +
Sbjct: 455 LALKLGRELHG-----FIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVS 509
Query: 600 IWGSLLT 606
W S++T
Sbjct: 510 -WNSMIT 515
Score = 122 bits (306), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 147/320 (45%), Gaps = 6/320 (1%)
Query: 225 PDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERV 284
P RLS++ L CS +R GK++H +I N + D ++ MYA CG ++
Sbjct: 35 PRRLSLL--LQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKM 92
Query: 285 FNEMTCK--NIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFG 342
F + + +I WN++I + NG ++ +M + PD T L+ +C
Sbjct: 93 FYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALK 152
Query: 343 TLLEGKCIHGYAIRKMFLP-HLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAII 401
+G + + + + + ++L+ Y + G++ +F R+ +K+ V WN ++
Sbjct: 153 N-FKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVML 211
Query: 402 AAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELS 461
Y + G + ++ F +R + P+AVT +L A + Q+H + +
Sbjct: 212 NGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVD 271
Query: 462 SNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRM 521
N+++ MY+KCG A + F MS + V+WN MI Y G S+ F M
Sbjct: 272 FEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEM 331
Query: 522 KQNGIEPNESTFVSLLSSCS 541
+G+ P+ TF SLL S S
Sbjct: 332 ISSGVLPDAITFSSLLPSVS 351
>AT4G02750.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:1221116-1223461 REVERSE
Length = 781
Score = 403 bits (1036), Expect = e-112, Method: Compositional matrix adjust.
Identities = 236/774 (30%), Positives = 425/774 (54%), Gaps = 51/774 (6%)
Query: 43 TKKQMSETPKRGMIKPNSLSLTR---SLCEFVDSGAMDNALYLFEKMNQPDTYIWNVIIR 99
T+ Q+ ++ + ++K + ++ ++ +G + AL +F++M + + +N +I
Sbjct: 44 TQTQIQKSQTKPLLKCGDSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMIS 103
Query: 100 GFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDR 159
G+ G F+ + M D ++ +IK R + + ++ L +I +R
Sbjct: 104 GYLRNGEFELARKLFDEMPER----DLVSWNVMIKGYVRNRNLGKARE----LFEIMPER 155
Query: 160 DIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEML 219
D+ N+++ Y + G V+ A VF+ MP ++ VSWN +++ Y ++ M FK
Sbjct: 156 DVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSR- 214
Query: 220 GLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLEL-DIMVQTSLIDMYAKCGKV 278
+ +++S C +G V+ K + + + + + D++ ++I YA+ GK+
Sbjct: 215 ------ENWALVS--WNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKI 266
Query: 279 DYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSC 338
D A ++F+E +++ W AM+ GY N E+ +M E N + N + +
Sbjct: 267 DEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVS-----WNAMLAG 321
Query: 339 SKFGTLLEGKCIHGYAIRKMF--LPHLVLET--ALVDMYGKCGQLKFAECVFGRINEKNM 394
G +E +++F +P + T ++ Y +CG++ A+ +F ++ +++
Sbjct: 322 YVQGERME-------MAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDP 374
Query: 395 VSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAY 454
VSW A+IA Y Q+G + EAL LF + + + + + +S L A++ + KQ+H
Sbjct: 375 VSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGR 434
Query: 455 ITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTIS 514
+ K + F NA++ MY KCG ++ A F M+ K++VSWNTMI Y+ HGFG ++
Sbjct: 435 LVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVA 494
Query: 515 IQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVD 574
++ F MK+ G++P+++T V++LS+CS +GLV++G + F +M DY + +HY CMVD
Sbjct: 495 LRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVD 554
Query: 575 LLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTASRNNNDIFFAEFAAKHILSHDNDNTGC 634
LLGR G L+ A ++ MP P A IWG+LL ASR + + AE AA I + + +N+G
Sbjct: 555 LLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGM 614
Query: 635 YVLLANMYAEAGRWEDVEQIKLVMKKKGLAKTVDCCTVESKGKSQKFINNNKSHQQAYMI 694
YVLL+N+YA +GRW DV ++++ M+ KG+ K +E + K+ F ++ H + I
Sbjct: 615 YVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEI 674
Query: 695 Y---DVLDIILKKIG----EDVYIHSLSKFRPADVIKKKMKSPQNHSVKLAICFGLISTA 747
+ + LD+ +KK G V +H + + ++K + + HS +LA+ +G++ +
Sbjct: 675 FAFLEELDLRMKKAGYVSKTSVVLHDVEE-------EEKERMVRYHSERLAVAYGIMRVS 727
Query: 748 IGKPIIIRKNTRICKDCHIAAKKISRVTKREIIVGDSKIFHHFEDGRCSCGDYW 801
G+PI + KN R+C+DCH A K ++R+T R II+ D+ FHHF+DG CSCGDYW
Sbjct: 728 SGRPIRVIKNLRVCEDCHNAIKYMARITGRLIILRDNNRFHHFKDGSCSCGDYW 781
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE
Length = 654
Score = 403 bits (1035), Expect = e-112, Method: Compositional matrix adjust.
Identities = 224/654 (34%), Positives = 360/654 (55%), Gaps = 31/654 (4%)
Query: 32 LVNPRIRKSNPTKKQM--SETPKRGMIKPNSLSLTRSLCEFVDSGAMDNALYLFEKMNQP 89
L+ IR N Q+ KR + +S L + ++ A ++F+++ P
Sbjct: 5 LLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEIPHP 64
Query: 90 --DTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKK 147
+ W+++IR +++ ++ +D Y++M G+ +T+PFV+KAC L + +GK
Sbjct: 65 RINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGKL 124
Query: 148 VHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGD 207
+H + D+YVC +L+D Y K G +E+A KVF+ MP RD+V+WN M++G+ +
Sbjct: 125 IHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSL--- 181
Query: 208 GLKSLMCFKEMLGL--------GEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLE 259
C +++GL G P+ +++ +R GK +H R G
Sbjct: 182 ----HCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFS 237
Query: 260 LDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRM 319
D++V+T ++D+YAK + YA RVF+ KN V W+AMIGGY N E+ +M
Sbjct: 238 NDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQM 297
Query: 320 QEDNLIPDAITMIN------LLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMY 373
L+ D + M+ +L C++FG L G+C+H YA++ F+ L ++ ++ Y
Sbjct: 298 ----LVNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFY 353
Query: 374 GKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIA 433
K G L A F I K+++S+N++I V N R EE+ LFH +R ++PD T+
Sbjct: 354 AKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLL 413
Query: 434 SILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFK 493
+L A + LA + H Y + NT NA++ MY KCG L A+R FD+M +
Sbjct: 414 GVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKR 473
Query: 494 NLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELF 553
++VSWNTM+ + IHG G ++ LF+ M++ G+ P+E T +++LS+CS SGLV+EG +LF
Sbjct: 474 DIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLF 533
Query: 554 NSM-KMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTASRNNN 612
NSM + D+N+ I+HY CM DLL R G LD A F+ +MP P R+ G+LL+A
Sbjct: 534 NSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYK 593
Query: 613 DIFFAEFAAKHILSHDNDNTGCYVLLANMYAEAGRWEDVEQIKLVMKKKGLAKT 666
+ +K + S + T VLL+N Y+ A RWED +I+++ KK+GL KT
Sbjct: 594 NAELGNEVSKKMQSL-GETTESLVLLSNTYSAAERWEDAARIRMIQKKRGLLKT 646
>AT5G09950.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3102877-3105864 REVERSE
Length = 995
Score = 400 bits (1027), Expect = e-111, Method: Compositional matrix adjust.
Identities = 253/748 (33%), Positives = 401/748 (53%), Gaps = 21/748 (2%)
Query: 70 FVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEY------EGIG 123
F SG++ A +F +M + N ++ G + +E + M E
Sbjct: 253 FAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYV 312
Query: 124 IDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGL-DRDIYVCNSLIDMYFKFGFVEVAEK 182
I +FP + + +G++VHG +I GL D + + N L++MY K G + A +
Sbjct: 313 ILLSSFPEY--SLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARR 370
Query: 183 VFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCC 242
VF M +D VSWN M+ G G ++++ +K M P ++ISSL C+
Sbjct: 371 VFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKW 430
Query: 243 VRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGG 302
+ G++IH + ++ G++L++ V +L+ +YA+ G ++ ++F+ M + V+WN++IG
Sbjct: 431 AKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGA 490
Query: 303 YAINGHFL-ESFTCLKRMQEDNLIPDAITMINLLPSCSK--FGTLLEGKCIHGYAIRKMF 359
A + L E+ C Q + IT ++L + S FG L GK IHG A++
Sbjct: 491 LARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGEL--GKQIHGLALKNNI 548
Query: 360 LPHLVLETALVDMYGKCGQLKFAECVFGRINEK-NMVSWNAIIAAYVQNGRNEEALELFH 418
E AL+ YGKCG++ E +F R+ E+ + V+WN++I+ Y+ N +AL+L
Sbjct: 549 ADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVW 608
Query: 419 CLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCG 478
+ + D+ A++L A+A +AT+ ++HA + L S+ +A+V MY+KCG
Sbjct: 609 FMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCG 668
Query: 479 DLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNG-IEPNESTFVSLL 537
L A R+F++M +N SWN+MI YA HG G +++LF MK +G P+ TFV +L
Sbjct: 669 RLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVL 728
Query: 538 SSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPT 597
S+CS +GL+ EG++ F SM Y + IEH+ CM D+LGR G LD + FIE+MP+ P
Sbjct: 729 SACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPN 788
Query: 598 ARIWGSLLTA--SRNNNDIFFAEFAAKHILSHDNDNTGCYVLLANMYAEAGRWEDVEQIK 655
IW ++L A N + AA+ + + +N YVLL NMYA GRWED+ + +
Sbjct: 789 VLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKAR 848
Query: 656 LVMKKKGLAKTVDCCTVESKGKSQKFINNNKSHQQAYMIYDVLDIILKKIGEDVYIHSLS 715
MK + K V K F+ +KSH A +IY L + +K+ + Y+ +
Sbjct: 849 KKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKMRDAGYVPQ-T 907
Query: 716 KFRPADVIKK-KMKSPQNHSVKLAICFGLISTAIGK-PIIIRKNTRICKDCHIAAKKISR 773
F D+ ++ K + HS KLA+ F L + PI I KN R+C DCH A K IS+
Sbjct: 908 GFALYDLEQENKEEILSYHSEKLAVAFVLAAQRSSTLPIRIMKNLRVCGDCHSAFKYISK 967
Query: 774 VTKREIIVGDSKIFHHFEDGRCSCGDYW 801
+ R+II+ DS FHHF+DG CSC D+W
Sbjct: 968 IEGRQIILRDSNRFHHFQDGACSCSDFW 995
Score = 201 bits (510), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 144/479 (30%), Positives = 237/479 (49%), Gaps = 22/479 (4%)
Query: 149 HGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDG 208
H +L K LD+D+Y+CN+LI+ Y + G A KVF+ MPLR+ VSW C+V+GY G+
Sbjct: 24 HSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEH 83
Query: 209 LKSLMCFKEMLGLGEKPDRLSMISSLGGC----SIGCCVRGGKEIHCQVIRNGLELDIMV 264
++L+ ++M+ G ++ + +S L C S+G + G++IH + + +D +V
Sbjct: 84 KEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVG--ILFGRQIHGLMFKLSYAVDAVV 141
Query: 265 QTSLIDMYAKC-GKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDN 323
LI MY KC G V YA F ++ KN V+WN++I Y+ G +F MQ D
Sbjct: 142 SNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDG 201
Query: 324 LIPDAITMINLLPSCSKFGT----LLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQL 379
P T +L+ + LLE I + L L + + LV + K G L
Sbjct: 202 SRPTEYTFGSLVTTACSLTEPDVRLLEQ--IMCTIQKSGLLTDLFVGSGLVSAFAKSGSL 259
Query: 380 KFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQT-LKPDA-VTIASILP 437
+A VF ++ +N V+ N ++ V+ EEA +LF + + + P++ V + S P
Sbjct: 260 SYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFP 319
Query: 438 AY--AELATVSECKQIHAYITKLELSSNTF-TSNAIVYMYAKCGDLQTARRYFDSMSFKN 494
Y AE + + +++H ++ L N +V MYAKCG + ARR F M+ K+
Sbjct: 320 EYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKD 379
Query: 495 LVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFN 554
VSWN+MI +G +++ + M+++ I P T +S LSSC+ G ++
Sbjct: 380 SVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHG 439
Query: 555 SMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMP---LVPTARIWGSLLTASRN 610
+ ID + ++ L TG L+ ++ MP V I G+L + R+
Sbjct: 440 E-SLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERS 497
Score = 198 bits (504), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 154/553 (27%), Positives = 271/553 (49%), Gaps = 12/553 (2%)
Query: 70 FVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTF 129
++++G +A +F++M + W I+ G+S G +E + F M EGI + + F
Sbjct: 46 YLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAF 105
Query: 130 PFVIKACGRL--LSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFK-FGFVEVAEKVFEA 186
V++AC + + + G+++HG + K+ D V N LI MY+K G V A F
Sbjct: 106 VSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGD 165
Query: 187 MPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSL-GGCSIG-CCVR 244
+ +++ VSWN +++ Y GD + F M G +P + S + CS+ VR
Sbjct: 166 IEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVR 225
Query: 245 GGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYA 304
++I C + ++GL D+ V + L+ +AK G + YA +VFN+M +N V N ++ G
Sbjct: 226 LLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLV 285
Query: 305 INGHFLESFTCLKRMQE-DNLIPDA-ITMINLLP--SCSKFGTLLEGKCIHGYAIRKMFL 360
E+ M ++ P++ + +++ P S ++ L +G+ +HG+ I +
Sbjct: 286 RQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLV 345
Query: 361 PHLV-LETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHC 419
+V + LV+MY KCG + A VF + +K+ VSWN++I QNG EA+E +
Sbjct: 346 DFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKS 405
Query: 420 LRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGD 479
+R + P + T+ S L + A L +QIH KL + N SNA++ +YA+ G
Sbjct: 406 MRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGY 465
Query: 480 LQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTI-SIQLFSRMKQNGIEPNESTFVSLLS 538
L R+ F SM + VSWN++I A A ++ F ++ G + N TF S+LS
Sbjct: 466 LNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLS 525
Query: 539 SCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTA 598
+ S G ++ + + + NI ++ G+ G +D ++ M
Sbjct: 526 AVSSLSFGELGKQI-HGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDN 584
Query: 599 RIWGSLLTASRNN 611
W S+++ +N
Sbjct: 585 VTWNSMISGYIHN 597
Score = 192 bits (489), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 155/549 (28%), Positives = 273/549 (49%), Gaps = 23/549 (4%)
Query: 74 GAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTF-PFV 132
G++ AL F + ++ WN II +S G + + M+Y+G +TF V
Sbjct: 154 GSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLV 213
Query: 133 IKACG------RLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEA 186
AC RLL +++ + K GL D++V + L+ + K G + A KVF
Sbjct: 214 TTACSLTEPDVRLL-----EQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQ 268
Query: 187 MPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGE-KPDR-LSMISSLGGCSIG--CC 242
M R+ V+ N ++ G G ++ F +M + + P+ + ++SS S+
Sbjct: 269 METRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVG 328
Query: 243 VRGGKEIHCQVIRNGLELDIMVQ--TSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMI 300
++ G+E+H VI GL +D MV L++MYAKCG + A RVF MT K+ V+WN+MI
Sbjct: 329 LKKGREVHGHVITTGL-VDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMI 387
Query: 301 GGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFL 360
G NG F+E+ K M+ +++P + T+I+ L SC+ G+ IHG +++
Sbjct: 388 TGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGID 447
Query: 361 PHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRN-EEALELFHC 419
++ + AL+ +Y + G L +F + E + VSWN+II A ++ R+ EA+ F
Sbjct: 448 LNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLN 507
Query: 420 LRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGD 479
+ K + +T +S+L A + L+ KQIH K ++ T NA++ Y KCG+
Sbjct: 508 AQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGE 567
Query: 480 LQTARRYFDSMS-FKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLS 538
+ + F M+ ++ V+WN+MI Y + ++ L M Q G + + ++LS
Sbjct: 568 MDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLS 627
Query: 539 SCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTA 598
+ + + G E+ ++ + ++ + +VD+ + G LD A +F MP V +
Sbjct: 628 AFASVATLERGMEV-HACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMP-VRNS 685
Query: 599 RIWGSLLTA 607
W S+++
Sbjct: 686 YSWNSMISG 694
>AT3G49140.2 | Symbols: | EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885);
BEST Arabidopsis thaliana protein match is: EMB2758
(embryo defective 2758) (TAIR:AT4G33990.1). |
chr3:18213981-18217848 REVERSE
Length = 896
Score = 397 bits (1019), Expect = e-110, Method: Compositional matrix adjust.
Identities = 232/662 (35%), Positives = 356/662 (53%), Gaps = 46/662 (6%)
Query: 146 KKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGY--- 202
+ VH ++I L + + L+ Y V A KVF+ +P R+++ N M+ Y
Sbjct: 59 RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNN 118
Query: 203 RVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDI 262
G+G+K F M G +PD + L CS + G++IH + GL +
Sbjct: 119 GFYGEGVK---VFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTL 175
Query: 263 MVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQED 322
V L+ MY KCG + A V +EM+ +++V+WN+++ GYA N F ++ + M+
Sbjct: 176 FVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESV 235
Query: 323 NLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFA 382
+ DA TM +LLP+ S T + +
Sbjct: 236 KISHDAGTMASLLPAVSNTTT---------------------------------ENVMYV 262
Query: 383 ECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAEL 442
+ +F ++ +K++VSWN +I Y++N EA+EL+ + +PDAV+I S+LPA +
Sbjct: 263 KDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDT 322
Query: 443 ATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMI 502
+ +S K+IH YI + +L N NA++ MYAKCG L+ AR F++M +++VSW MI
Sbjct: 323 SALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMI 382
Query: 503 MAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNI 562
AY G G ++ LFS+++ +G+ P+ FV+ L++CS +GL+ EG F M Y I
Sbjct: 383 SAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKI 442
Query: 563 DYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTASRNNNDIFFAEFAAK 622
+EH CMVDLLGR G + A +FI++M + P R+WG+LL A R ++D AA
Sbjct: 443 TPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAAD 502
Query: 623 HILSHDNDNTGCYVLLANMYAEAGRWEDVEQIKLVMKKKGLAKTVDCCTVESKGKSQKFI 682
+ + +G YVLL+N+YA+AGRWE+V I+ +MK KGL K VE F+
Sbjct: 503 KLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFL 562
Query: 683 NNNKSHQQAYMIYDVLDIILKKIGEDVYIHSLSKFRPADVIKKKMKSP-QNHSVKLAICF 741
++SH Q+ IY LD+++KK+ E Y+ S+ DV ++ ++ HS KLAI F
Sbjct: 563 VGDRSHPQSDEIYRELDVLVKKMKELGYVPD-SESALHDVEEEDKETHLAVHSEKLAIVF 621
Query: 742 GLISTA-----IGKPIIIRKNTRICKDCHIAAKKISRVTKREIIVGDSKIFHHFEDGRCS 796
L++T I I KN RIC DCH+AAK IS++T REII+ D+ FH F G CS
Sbjct: 622 ALMNTKEEEEDSNNTIRITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCS 681
Query: 797 CG 798
C
Sbjct: 682 CA 683
Score = 217 bits (553), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 142/464 (30%), Positives = 233/464 (50%), Gaps = 37/464 (7%)
Query: 78 NALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACG 137
+A +F+++ + + I NV+IR + N G + E + + M + D++TFP V+KAC
Sbjct: 92 SARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACS 151
Query: 138 RLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNC 197
+ + G+K+HG K+GL ++V N L+ MY K GF+ A V + M RD+VSWN
Sbjct: 152 CSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNS 211
Query: 198 MVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNG 257
+V GY +L +EM + D +M S L S N
Sbjct: 212 LVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVS-----------------NT 254
Query: 258 LELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLK 317
++M + DM+ K GK K++V+WN MIG Y N +E+
Sbjct: 255 TTENVMY---VKDMFFKMGK-------------KSLVSWNVMIGVYMKNAMPVEAVELYS 298
Query: 318 RMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCG 377
RM+ D PDA+++ ++LP+C L GK IHGY RK +P+L+LE AL+DMY KCG
Sbjct: 299 RMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCG 358
Query: 378 QLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILP 437
L+ A VF + +++VSW A+I+AY +GR +A+ LF L++ L PD++ + L
Sbjct: 359 CLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLA 418
Query: 438 AYAELATVSECKQIHAYITK-LELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFK-NL 495
A + + E + +T +++ +V + + G ++ A R+ MS + N
Sbjct: 419 ACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNE 478
Query: 496 VSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSS 539
W ++ A +H I + ++ Q + P +S + LLS+
Sbjct: 479 RVWGALLGACRVHSDTDIGLLAADKLFQ--LAPEQSGYYVLLSN 520
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 106/365 (29%), Positives = 176/365 (48%), Gaps = 35/365 (9%)
Query: 243 VRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGG 302
+R + +H ++I L + + L+ YA V A +VF+E+ +N++ N MI
Sbjct: 55 IRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRS 114
Query: 303 YAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPH 362
Y NG + E M N+ PD T +L +CS GT++ G+ IHG A +
Sbjct: 115 YVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSST 174
Query: 363 LVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRN 422
L + LV MYGKCG L A V ++ +++VSWN+++ Y QN R ++ALE+ + +
Sbjct: 175 LFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMES 234
Query: 423 QTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQT 482
+ DA T+AS+LPA SNT T N MY K D+
Sbjct: 235 VKISHDAGTMASLLPAV----------------------SNTTTENV---MYVK--DM-- 265
Query: 483 ARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSI 542
F M K+LVSWN MI Y + +++L+SRM+ +G EP+ + S+L +C
Sbjct: 266 ----FFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGD 321
Query: 543 SGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWG 602
+ ++ G ++ ++ I + ++D+ + G L+ A+ E M W
Sbjct: 322 TSALSLGKKIHGYIERKKLIP-NLLLENALIDMYAKCGCLEKARDVFENMKSRDVVS-WT 379
Query: 603 SLLTA 607
++++A
Sbjct: 380 AMISA 384
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 88/332 (26%), Positives = 152/332 (45%), Gaps = 35/332 (10%)
Query: 74 GAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVI 133
G + A + ++M++ D WN ++ G++ F + ++ ME I D T ++
Sbjct: 189 GFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLL 248
Query: 134 KACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLV 193
A + + +YV DM+FK G + LV
Sbjct: 249 PAVSNTTT----------------ENVMYV----KDMFFKMG-------------KKSLV 275
Query: 194 SWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQV 253
SWN M+ Y ++++ + M G +PD +S+ S L C + GK+IH +
Sbjct: 276 SWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYI 335
Query: 254 IRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESF 313
R L +++++ +LIDMYAKCG ++ A VF M +++V+W AMI Y +G ++
Sbjct: 336 ERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAV 395
Query: 314 TCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGK-CIHGYAIRKMFLPHLVLETALVDM 372
++Q+ L+PD+I + L +CS G L EG+ C P L +VD+
Sbjct: 396 ALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDL 455
Query: 373 YGKCGQLKFAECVFGRIN-EKNMVSWNAIIAA 403
G+ G++K A ++ E N W A++ A
Sbjct: 456 LGRAGKVKEAYRFIQDMSMEPNERVWGALLGA 487
>AT3G49140.1 | Symbols: | EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885);
BEST Arabidopsis thaliana protein match is: EMB2758
(embryo defective 2758) (TAIR:AT4G33990.1); Has 45368
Blast hits to 16108 proteins in 635 species: Archae -
60; Bacteria - 10333; Metazoa - 8211; Fungi - 3499;
Plants - 14806; Viruses - 492; Other Eukaryotes - 7967
(source: NCBI BLink). | chr3:18212187-18217848 REVERSE
Length = 1215
Score = 396 bits (1018), Expect = e-110, Method: Compositional matrix adjust.
Identities = 232/662 (35%), Positives = 356/662 (53%), Gaps = 46/662 (6%)
Query: 146 KKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGY--- 202
+ VH ++I L + + L+ Y V A KVF+ +P R+++ N M+ Y
Sbjct: 59 RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNN 118
Query: 203 RVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDI 262
G+G+K F M G +PD + L CS + G++IH + GL +
Sbjct: 119 GFYGEGVK---VFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTL 175
Query: 263 MVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQED 322
V L+ MY KCG + A V +EM+ +++V+WN+++ GYA N F ++ + M+
Sbjct: 176 FVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESV 235
Query: 323 NLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFA 382
+ DA TM +LLP+ S T + +
Sbjct: 236 KISHDAGTMASLLPAVSNTTT---------------------------------ENVMYV 262
Query: 383 ECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAEL 442
+ +F ++ +K++VSWN +I Y++N EA+EL+ + +PDAV+I S+LPA +
Sbjct: 263 KDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDT 322
Query: 443 ATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMI 502
+ +S K+IH YI + +L N NA++ MYAKCG L+ AR F++M +++VSW MI
Sbjct: 323 SALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMI 382
Query: 503 MAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNI 562
AY G G ++ LFS+++ +G+ P+ FV+ L++CS +GL+ EG F M Y I
Sbjct: 383 SAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKI 442
Query: 563 DYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTASRNNNDIFFAEFAAK 622
+EH CMVDLLGR G + A +FI++M + P R+WG+LL A R ++D AA
Sbjct: 443 TPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAAD 502
Query: 623 HILSHDNDNTGCYVLLANMYAEAGRWEDVEQIKLVMKKKGLAKTVDCCTVESKGKSQKFI 682
+ + +G YVLL+N+YA+AGRWE+V I+ +MK KGL K VE F+
Sbjct: 503 KLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFL 562
Query: 683 NNNKSHQQAYMIYDVLDIILKKIGEDVYIHSLSKFRPADVIKKKMKSP-QNHSVKLAICF 741
++SH Q+ IY LD+++KK+ E Y+ S+ DV ++ ++ HS KLAI F
Sbjct: 563 VGDRSHPQSDEIYRELDVLVKKMKELGYVPD-SESALHDVEEEDKETHLAVHSEKLAIVF 621
Query: 742 GLISTA-----IGKPIIIRKNTRICKDCHIAAKKISRVTKREIIVGDSKIFHHFEDGRCS 796
L++T I I KN RIC DCH+AAK IS++T REII+ D+ FH F G CS
Sbjct: 622 ALMNTKEEEEDSNNTIRITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCS 681
Query: 797 CG 798
C
Sbjct: 682 CA 683
Score = 217 bits (553), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 142/464 (30%), Positives = 233/464 (50%), Gaps = 37/464 (7%)
Query: 78 NALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACG 137
+A +F+++ + + I NV+IR + N G + E + + M + D++TFP V+KAC
Sbjct: 92 SARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACS 151
Query: 138 RLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNC 197
+ + G+K+HG K+GL ++V N L+ MY K GF+ A V + M RD+VSWN
Sbjct: 152 CSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNS 211
Query: 198 MVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNG 257
+V GY +L +EM + D +M S L S N
Sbjct: 212 LVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVS-----------------NT 254
Query: 258 LELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLK 317
++M + DM+ K GK K++V+WN MIG Y N +E+
Sbjct: 255 TTENVMY---VKDMFFKMGK-------------KSLVSWNVMIGVYMKNAMPVEAVELYS 298
Query: 318 RMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCG 377
RM+ D PDA+++ ++LP+C L GK IHGY RK +P+L+LE AL+DMY KCG
Sbjct: 299 RMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCG 358
Query: 378 QLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILP 437
L+ A VF + +++VSW A+I+AY +GR +A+ LF L++ L PD++ + L
Sbjct: 359 CLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLA 418
Query: 438 AYAELATVSECKQIHAYITK-LELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFK-NL 495
A + + E + +T +++ +V + + G ++ A R+ MS + N
Sbjct: 419 ACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNE 478
Query: 496 VSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSS 539
W ++ A +H I + ++ Q + P +S + LLS+
Sbjct: 479 RVWGALLGACRVHSDTDIGLLAADKLFQ--LAPEQSGYYVLLSN 520
Score = 153 bits (386), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 105/365 (28%), Positives = 174/365 (47%), Gaps = 35/365 (9%)
Query: 243 VRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGG 302
+R + +H ++I L + + L+ YA V A +VF+E+ +N++ N MI
Sbjct: 55 IRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRS 114
Query: 303 YAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPH 362
Y NG + E M N+ PD T +L +CS GT++ G+ IHG A +
Sbjct: 115 YVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSST 174
Query: 363 LVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRN 422
L + LV MYGKCG L A V ++ +++VSWN+++ Y QN R ++ALE+ + +
Sbjct: 175 LFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMES 234
Query: 423 QTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQT 482
+ DA T+AS+LPA SNT T N MY K
Sbjct: 235 VKISHDAGTMASLLPAV----------------------SNTTTENV---MYVK------ 263
Query: 483 ARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSI 542
F M K+LVSWN MI Y + +++L+SRM+ +G EP+ + S+L +C
Sbjct: 264 --DMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGD 321
Query: 543 SGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWG 602
+ ++ G ++ ++ I + ++D+ + G L+ A+ E M W
Sbjct: 322 TSALSLGKKIHGYIERKKLIP-NLLLENALIDMYAKCGCLEKARDVFENMKSRDVVS-WT 379
Query: 603 SLLTA 607
++++A
Sbjct: 380 AMISA 384
Score = 135 bits (341), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 88/332 (26%), Positives = 152/332 (45%), Gaps = 35/332 (10%)
Query: 74 GAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVI 133
G + A + ++M++ D WN ++ G++ F + ++ ME I D T ++
Sbjct: 189 GFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLL 248
Query: 134 KACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLV 193
A + + +YV DM+FK G + LV
Sbjct: 249 PAVSNTTT----------------ENVMYV----KDMFFKMG-------------KKSLV 275
Query: 194 SWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQV 253
SWN M+ Y ++++ + M G +PD +S+ S L C + GK+IH +
Sbjct: 276 SWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYI 335
Query: 254 IRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESF 313
R L +++++ +LIDMYAKCG ++ A VF M +++V+W AMI Y +G ++
Sbjct: 336 ERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAV 395
Query: 314 TCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGK-CIHGYAIRKMFLPHLVLETALVDM 372
++Q+ L+PD+I + L +CS G L EG+ C P L +VD+
Sbjct: 396 ALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDL 455
Query: 373 YGKCGQLKFAECVFGRIN-EKNMVSWNAIIAA 403
G+ G++K A ++ E N W A++ A
Sbjct: 456 LGRAGKVKEAYRFIQDMSMEPNERVWGALLGA 487
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD
Length = 786
Score = 394 bits (1013), Expect = e-109, Method: Compositional matrix adjust.
Identities = 241/751 (32%), Positives = 383/751 (50%), Gaps = 97/751 (12%)
Query: 148 VHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLR----------------- 190
VH ++IK GL +Y+ N+L+++Y K G+ A K+F+ MPLR
Sbjct: 36 VHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGD 95
Query: 191 --------------DLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGG 236
D VSW M+ GY+ IG K++ +M+ G +P + ++ + L
Sbjct: 96 MDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLAS 155
Query: 237 CSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCG-------------------- 276
+ C+ GK++H +++ GL ++ V SL++MYAKCG
Sbjct: 156 VAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSW 215
Query: 277 -----------KVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLI 325
++D A F +M ++IV WN+MI G+ G+ L + +M D+L+
Sbjct: 216 NAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLL 275
Query: 326 -PDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCG------- 377
PD T+ ++L +C+ L GK IH + + F ++ AL+ MY +CG
Sbjct: 276 SPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARR 335
Query: 378 --------------------------QLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNE 411
+ A+ +F + ++++V+W A+I Y Q+G
Sbjct: 336 LIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYG 395
Query: 412 EALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIV 471
EA+ LF + +P++ T+A++L + LA++S KQIH K + SNA++
Sbjct: 396 EAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALI 455
Query: 472 YMYAKCGDLQTARRYFDSMSF-KNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNE 530
MYAK G++ +A R FD + ++ VSW +MI+A A HG +++LF M G+ P+
Sbjct: 456 TMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDH 515
Query: 531 STFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIE 590
T+V + S+C+ +GLVN+G + F+ MK I + HY CMVDL GR G L A++FIE
Sbjct: 516 ITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIE 575
Query: 591 EMPLVPTARIWGSLLTASRNNNDIFFAEFAAKHILSHDNDNTGCYVLLANMYAEAGRWED 650
+MP+ P WGSLL+A R + +I + AA+ +L + +N+G Y LAN+Y+ G+WE+
Sbjct: 576 KMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEE 635
Query: 651 VEQIKLVMKKKGLAKTVDCCTVESKGKSQKFINNNKSHQQAYMIYDVLDIILKKIGEDVY 710
+I+ MK + K +E K K F + +H + IY + I +I + Y
Sbjct: 636 AAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGY 695
Query: 711 IHSLSKFRPADVIKKKMKSPQNHSVKLAICFGLISTAIGKPIIIRKNTRICKDCHIAAKK 770
+ + + K + ++HS KLAI FGLIST + I KN R+C DCH A K
Sbjct: 696 VPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKF 755
Query: 771 ISRVTKREIIVGDSKIFHHFEDGRCSCGDYW 801
IS++ REIIV D+ FHHF+DG CSC DYW
Sbjct: 756 ISKLVGREIIVRDTTRFHHFKDGFCSCRDYW 786
Score = 206 bits (524), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 157/585 (26%), Positives = 266/585 (45%), Gaps = 80/585 (13%)
Query: 44 KKQMSETPKRGMIKPNSLSLTRSLCEFVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSN 103
+K E P R N++ L + G MD+ F+++ Q D+ W +I G+ N
Sbjct: 69 RKLFDEMPLRTAFSWNTV-----LSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKN 123
Query: 104 KGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYV 163
G + + I M EGI FT V+ + GKKVH ++K+GL ++ V
Sbjct: 124 IGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSV 183
Query: 164 CNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNC-------------------------- 197
NSL++MY K G +A+ VF+ M +RD+ SWN
Sbjct: 184 SNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDI 243
Query: 198 -----MVNGYRVIGDGLKSLMCFKEMLGLG-EKPDRLSMISSLGGCS--IGCCVRGGKEI 249
M++G+ G L++L F +ML PDR ++ S L C+ C+ GK+I
Sbjct: 244 VTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCI--GKQI 301
Query: 250 HCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAER-------------------------- 283
H ++ G ++ +V +LI MY++CG V+ A R
Sbjct: 302 HSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLG 361
Query: 284 -------VFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLP 336
+F + +++VAW AMI GY +G + E+ + M P++ T+ +L
Sbjct: 362 DMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLS 421
Query: 337 SCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRIN-EKNMV 395
S +L GK IHG A++ + + + AL+ MY K G + A F I E++ V
Sbjct: 422 VASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTV 481
Query: 396 SWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYI 455
SW ++I A Q+G EEALELF + + L+PD +T + A V++ +Q +
Sbjct: 482 SWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMM 541
Query: 456 TKLELSSNTFTSNA-IVYMYAKCGDLQTARRYFDSMSFK-NLVSWNTMIMAYAIHGFGTI 513
++ T + A +V ++ + G LQ A+ + + M + ++V+W +++ A +H I
Sbjct: 542 KDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVH--KNI 599
Query: 514 SIQLFSRMKQNGIEP-NESTFVSLLSSCSISGLVNEGWELFNSMK 557
+ + + +EP N + +L + S G E ++ SMK
Sbjct: 600 DLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMK 644
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/323 (21%), Positives = 135/323 (41%), Gaps = 65/323 (20%)
Query: 333 NLLP-SCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINE 391
NLL S +K + +H I+ + + L L+++Y K G A +F +
Sbjct: 18 NLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPL 77
Query: 392 KNMVSWNAIIAAYVQNGRNEEALELFHCLRN----------------------------- 422
+ SWN +++AY + G + E F L
Sbjct: 78 RTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDM 137
Query: 423 --QTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDL 480
+ ++P T+ ++L + A + K++H++I KL L N SN+++ MYAKCGD
Sbjct: 138 VKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDP 197
Query: 481 QTARRYFD-------------------------------SMSFKNLVSWNTMIMAYAIHG 509
A+ FD M+ +++V+WN+MI + G
Sbjct: 198 MMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRG 257
Query: 510 FGTISIQLFSRMKQNG-IEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEH 568
+ ++ +FS+M ++ + P+ T S+LS+C+ + G ++ +S + D
Sbjct: 258 YDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQI-HSHIVTTGFDISGIV 316
Query: 569 YGCMVDLLGRTGNLDAAKQFIEE 591
++ + R G ++ A++ IE+
Sbjct: 317 LNALISMYSRCGGVETARRLIEQ 339
>AT5G13230.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:4222514-4224982 FORWARD
Length = 822
Score = 392 bits (1007), Expect = e-109, Method: Compositional matrix adjust.
Identities = 243/741 (32%), Positives = 390/741 (52%), Gaps = 15/741 (2%)
Query: 67 LCEFVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDN 126
L +V +G +AL LF++M + + + + +G++ Q+ I Y R+ EG ++
Sbjct: 91 LNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYA----CQDPIGLYSRLHREGHELNP 146
Query: 127 FTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEA 186
F +K L +H ++K+G D + +V +LI+ Y G V+ A VFE
Sbjct: 147 HVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEG 206
Query: 187 MPLRDLVSWNCMVNGYRVIG---DGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGC-C 242
+ +D+V W +V+ Y G D LK L C + G P+ + ++L SIG
Sbjct: 207 ILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMA---GFMPNNYTFDTALKA-SIGLGA 262
Query: 243 VRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGG 302
K +H Q+++ LD V L+ +Y + G + A +VFNEM ++V W+ MI
Sbjct: 263 FDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIAR 322
Query: 303 YAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPH 362
+ NG E+ RM+E ++P+ T+ ++L C+ G+ +HG ++ F
Sbjct: 323 FCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLD 382
Query: 363 LVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELF-HCLR 421
+ + AL+D+Y KC ++ A +F ++ KN VSWN +I Y G +A +F LR
Sbjct: 383 IYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALR 442
Query: 422 NQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQ 481
NQ + VT +S L A A LA++ Q+H K + SN+++ MYAKCGD++
Sbjct: 443 NQ-VSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIK 501
Query: 482 TARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCS 541
A+ F+ M ++ SWN +I Y+ HG G ++++ MK +PN TF+ +LS CS
Sbjct: 502 FAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCS 561
Query: 542 ISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIW 601
+GL+++G E F SM D+ I+ +EHY CMV LLGR+G LD A + IE +P P+ IW
Sbjct: 562 NAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIW 621
Query: 602 GSLLTASRNNNDIFFAEFAAKHILSHDNDNTGCYVLLANMYAEAGRWEDVEQIKLVMKKK 661
++L+AS N N+ FA +A+ IL + + YVL++NMYA A +W +V I+ MK+
Sbjct: 622 RAMLSASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEM 681
Query: 662 GLAKTVDCCTVESKGKSQKFINNNKSHQQAYMIYDVLDIILKKIGEDVYIHSLSKFRPAD 721
G+ K +E +G F H +I +L+ + K Y+ +
Sbjct: 682 GVKKEPGLSWIEHQGDVHYFSVGLSDHPDMKLINGMLEWLNMKATRAGYVPDRNAVLLDM 741
Query: 722 VIKKKMKSPQNHSVKLAICFGLISTAIGK-PIIIRKNTRICKDCHIAAKKISRVTKREII 780
++K K HS +LA+ +GL+ + I+I KN RIC DCH A K IS + +R+++
Sbjct: 742 DDEEKDKRLWVHSERLALAYGLVRMPSSRNRILIMKNLRICSDCHSAMKVISSIVQRDLV 801
Query: 781 VGDSKIFHHFEDGRCSCGDYW 801
+ D FHHF G CSCGD+W
Sbjct: 802 IRDMNRFHHFHAGVCSCGDHW 822
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 166/349 (47%), Gaps = 9/349 (2%)
Query: 246 GKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAI 305
K IHC +++ G LD+ L++ Y K G A +F+EM +N V++ + GYA
Sbjct: 68 AKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYAC 127
Query: 306 NGHFLESFTCLKRMQEDNLIPDAIT-MINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLV 364
+ ++ L R + L P T + L S K +H ++ + +
Sbjct: 128 QDP-IGLYSRLHR-EGHELNPHVFTSFLKLFVSLDKAEIC---PWLHSPIVKLGYDSNAF 182
Query: 365 LETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQT 424
+ AL++ Y CG + A VF I K++V W I++ YV+NG E++L+L C+R
Sbjct: 183 VGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAG 242
Query: 425 LKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTAR 484
P+ T + L A L K +H I K + ++ +Y + GD+ A
Sbjct: 243 FMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAF 302
Query: 485 RYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISG 544
+ F+ M ++V W+ MI + +GF ++ LF RM++ + PNE T S+L+ C+I
Sbjct: 303 KVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGK 362
Query: 545 LVNEGWELFN-SMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEM 592
G +L +K+ +++D + + ++D+ + +D A + E+
Sbjct: 363 CSGLGEQLHGLVVKVGFDLDIYVSN--ALIDVYAKCEKMDTAVKLFAEL 409
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 121/279 (43%), Gaps = 17/279 (6%)
Query: 322 DNLIP--DAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQL 379
D++IP D+ +L C + + K IH ++K L L++ Y K G
Sbjct: 41 DSIIPGLDSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFD 100
Query: 380 KFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAY 439
K A +F + E+N VS+ + Y ++ + L+ L + + + S L +
Sbjct: 101 KDALNLFDEMPERNNVSFVTLAQGYA----CQDPIGLYSRLHREGHELNPHVFTSFLKLF 156
Query: 440 AELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWN 499
L C +H+ I KL SN F A++ Y+ CG + +AR F+ + K++V W
Sbjct: 157 VSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWA 216
Query: 500 TMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVN-----EGWELFN 554
++ Y +G+ S++L S M+ G PN TF + L + G + G L
Sbjct: 217 GIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKT 276
Query: 555 SMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMP 593
+D + G ++ L + G++ A + EMP
Sbjct: 277 CYVLDPRVGVG------LLQLYTQLGDMSDAFKVFNEMP 309
>AT3G13770.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4519647-4521533 FORWARD
Length = 628
Score = 391 bits (1005), Expect = e-109, Method: Compositional matrix adjust.
Identities = 210/570 (36%), Positives = 324/570 (56%), Gaps = 2/570 (0%)
Query: 234 LGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNI 293
L C +R G+ +H +I+ ++T L+ Y KC ++ A +V +EM KN+
Sbjct: 59 LNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNV 118
Query: 294 VAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGY 353
V+W AMI Y+ GH E+ T M + P+ T +L SC + L GK IHG
Sbjct: 119 VSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGL 178
Query: 354 AIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEA 413
++ + H+ + ++L+DMY K GQ+K A +F + E+++VS AIIA Y Q G +EEA
Sbjct: 179 IVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEA 238
Query: 414 LELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYM 473
LE+FH L ++ + P+ VT AS+L A + LA + KQ H ++ + EL N+++ M
Sbjct: 239 LEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDM 298
Query: 474 YAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMK-QNGIEPNEST 532
Y+KCG+L ARR FD+M + +SWN M++ Y+ HG G ++LF M+ + ++P+ T
Sbjct: 299 YSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVT 358
Query: 533 FVSLLSSCSISGLVNEGWELFNSMKM-DYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEE 591
+++LS CS + + G +F+ M +Y G EHYGC+VD+LGR G +D A +FI+
Sbjct: 359 LLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKR 418
Query: 592 MPLVPTARIWGSLLTASRNNNDIFFAEFAAKHILSHDNDNTGCYVLLANMYAEAGRWEDV 651
MP PTA + GSLL A R + + E + ++ + +N G YV+L+N+YA AGRW DV
Sbjct: 419 MPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWADV 478
Query: 652 EQIKLVMKKKGLAKTVDCCTVESKGKSQKFINNNKSHQQAYMIYDVLDIILKKIGEDVYI 711
++ +M +K + K ++ + F N+++H + + + I K+ + Y+
Sbjct: 479 NNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQAGYV 538
Query: 712 HSLSKFRPADVIKKKMKSPQNHSVKLAICFGLISTAIGKPIIIRKNTRICKDCHIAAKKI 771
LS ++K K HS KLA+ FGLI+T G PI + KN RIC DCH AK
Sbjct: 539 PDLSCVLYDVDEEQKEKMLLGHSEKLALTFGLIATGEGIPIRVFKNLRICVDCHNFAKIF 598
Query: 772 SRVTKREIIVGDSKIFHHFEDGRCSCGDYW 801
S+V +RE+ + D FH DG CSCGDYW
Sbjct: 599 SKVFEREVSLRDKNRFHQIVDGICSCGDYW 628
Score = 184 bits (468), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 107/353 (30%), Positives = 183/353 (51%), Gaps = 6/353 (1%)
Query: 87 NQPDTYIWNVI--IRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIE 144
+ P Y+ I I + G QE + M G + + ++ AC + +
Sbjct: 14 SSPTNYVLQTILPISQLCSNGRLQEAL---LEMAMLGPEMGFHGYDALLNACLDKRALRD 70
Query: 145 GKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRV 204
G++VH +IK Y+ L+ Y K +E A KV + MP +++VSW M++ Y
Sbjct: 71 GQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQ 130
Query: 205 IGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMV 264
G ++L F EM+ KP+ + + L C + GK+IH +++ + I V
Sbjct: 131 TGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFV 190
Query: 265 QTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNL 324
+SL+DMYAK G++ A +F + +++V+ A+I GYA G E+ R+ + +
Sbjct: 191 GSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGM 250
Query: 325 IPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAEC 384
P+ +T +LL + S L GK H + +R+ + VL+ +L+DMY KCG L +A
Sbjct: 251 SPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARR 310
Query: 385 VFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQT-LKPDAVTIASIL 436
+F + E+ +SWNA++ Y ++G E LELF +R++ +KPDAVT+ ++L
Sbjct: 311 LFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVL 363
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 98/332 (29%), Positives = 168/332 (50%), Gaps = 11/332 (3%)
Query: 58 PNSLSLTRSLCEFVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRM 117
P + TR L + +++A + ++M + + W +I +S G E + + M
Sbjct: 85 PATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEM 144
Query: 118 EYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFV 177
+ FTF V+ +C R GK++HG ++K D I+V +SL+DMY K G +
Sbjct: 145 MRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQI 204
Query: 178 EVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGC 237
+ A ++FE +P RD+VS ++ GY +G ++L F + G P+ ++ S L
Sbjct: 205 KEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTAL 264
Query: 238 SIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWN 297
S + GK+ HC V+R L ++Q SLIDMY+KCG + YA R+F+ M + ++WN
Sbjct: 265 SGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWN 324
Query: 298 AMIGGYAINGHFLESFTCLKRMQEDNLI-PDAITMINLLPSCSKFG------TLLEGKCI 350
AM+ GY+ +G E + M+++ + PDA+T++ +L CS + +G
Sbjct: 325 AMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVA 384
Query: 351 HGYAIRKMFLPHLVLETALVDMYGKCGQLKFA 382
Y + P +VDM G+ G++ A
Sbjct: 385 GEYGTK----PGTEHYGCIVDMLGRAGRIDEA 412
>AT3G53360.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:19784502-19786808 FORWARD
Length = 768
Score = 390 bits (1002), Expect = e-108, Method: Compositional matrix adjust.
Identities = 223/637 (35%), Positives = 352/637 (55%), Gaps = 8/637 (1%)
Query: 74 GAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVI 133
G++ +A +F+ M + + + +I G+S G E I Y +M E + D F F +I
Sbjct: 116 GSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSII 175
Query: 134 KACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLV 193
KAC GK++H ++IK+ + N+LI MY +F + A +VF +P++DL+
Sbjct: 176 KACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLI 235
Query: 194 SWNCMVNGYRVIGDGLKSLMCFKEMLGLGE-KPDRLSMISSLGGCSIGCCVRGGKEIHCQ 252
SW+ ++ G+ +G ++L KEML G P+ SSL CS G +IH
Sbjct: 236 SWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGL 295
Query: 253 VIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLES 312
I++ L + + SL DMYA+CG ++ A RVF+++ + +WN +I G A NG+ E+
Sbjct: 296 CIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEA 355
Query: 313 FTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDM 372
+ +M+ IPDAI++ +LL + +K L +G IH Y I+ FL L + +L+ M
Sbjct: 356 VSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTM 415
Query: 373 YGKCGQLKFAECVFGRI----NEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPD 428
Y C L C F N + VSWN I+ A +Q+ + E L LF + +PD
Sbjct: 416 YTFCSDLY---CCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPD 472
Query: 429 AVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFD 488
+T+ ++L E++++ Q+H Y K L+ F N ++ MYAKCG L ARR FD
Sbjct: 473 HITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFD 532
Query: 489 SMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNE 548
SM +++VSW+T+I+ YA GFG ++ LF MK GIEPN TFV +L++CS GLV E
Sbjct: 533 SMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEE 592
Query: 549 GWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTAS 608
G +L+ +M+ ++ I EH C+VDLL R G L+ A++FI+EM L P +W +LL+A
Sbjct: 593 GLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSAC 652
Query: 609 RNNNDIFFAEFAAKHILSHDNDNTGCYVLLANMYAEAGRWEDVEQIKLVMKKKGLAKTVD 668
+ ++ A+ AA++IL D N+ +VLL +M+A +G WE+ ++ MKK + K
Sbjct: 653 KTQGNVHLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWENAALLRSSMKKHDVKKIPG 712
Query: 669 CCTVESKGKSQKFINNNKSHQQAYMIYDVLDIILKKI 705
+E + K F + H + IY VL I ++
Sbjct: 713 QSWIEIEDKIHIFFAEDIFHPERDDIYTVLHNIWSQM 749
Score = 208 bits (530), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 140/474 (29%), Positives = 237/474 (50%), Gaps = 17/474 (3%)
Query: 128 TFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAM 187
T+ +I AC S +G+K+H ++ D + N ++ MY K G + A +VF+ M
Sbjct: 69 TYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFM 128
Query: 188 PLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGK 247
P R+LVS+ ++ GY G G +++ + +ML PD+ + S + C+ V GK
Sbjct: 129 PERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGK 188
Query: 248 EIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAING 307
++H QVI+ ++ Q +LI MY + ++ A RVF + K++++W+++I G++ G
Sbjct: 189 QLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLG 248
Query: 308 HFLESFTCLKRMQEDNLI-PDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLE 366
E+ + LK M + P+ + L +CS G IHG I+ + +
Sbjct: 249 FEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAG 308
Query: 367 TALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLK 426
+L DMY +CG L A VF +I + SWN IIA NG +EA+ +F +R+
Sbjct: 309 CSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFI 368
Query: 427 PDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRY 486
PDA+++ S+L A + +S+ QIH+YI K ++ N+++ MY C DL
Sbjct: 369 PDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNL 428
Query: 487 FDSMSFKN---LVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSC-SI 542
F+ F+N VSWNT++ A H ++LF M + EP+ T +LL C I
Sbjct: 429 FE--DFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEI 486
Query: 543 SGLVNEGWELFNSMKMDYNIDYGI--EHY--GCMVDLLGRTGNLDAAKQFIEEM 592
S L S Y++ G+ E + ++D+ + G+L A++ + M
Sbjct: 487 SSLK------LGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSM 534
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 88/285 (30%), Positives = 148/285 (51%), Gaps = 7/285 (2%)
Query: 330 TMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRI 389
T I+L+ +CS +L +G+ IH + + +L ++ MYGKCG L+ A VF +
Sbjct: 69 TYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFM 128
Query: 390 NEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECK 449
E+N+VS+ ++I Y QNG+ EA+ L+ + + L PD SI+ A A + V K
Sbjct: 129 PERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGK 188
Query: 450 QIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHG 509
Q+HA + KLE SS+ NA++ MY + + A R F + K+L+SW+++I ++ G
Sbjct: 189 QLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLG 248
Query: 510 FGTISIQLFSRMKQNGI-EPNESTFVSLLSSCSISGLVNEGWELFN-SMKMDYNIDYGIE 567
F ++ M G+ PNE F S L +CS + G ++ +K + G
Sbjct: 249 FEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELA---GNA 305
Query: 568 HYGC-MVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTASRNN 611
GC + D+ R G L++A++ +++ TA W ++ NN
Sbjct: 306 IAGCSLCDMYARCGFLNSARRVFDQIERPDTAS-WNVIIAGLANN 349
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 81/142 (57%), Gaps = 1/142 (0%)
Query: 412 EALELFH-CLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAI 470
EALE F +N + K T S++ A + ++++ ++IH +I +T +N I
Sbjct: 49 EALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHI 108
Query: 471 VYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNE 530
+ MY KCG L+ AR FD M +NLVS+ ++I Y+ +G G +I+L+ +M Q + P++
Sbjct: 109 LSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQ 168
Query: 531 STFVSLLSSCSISGLVNEGWEL 552
F S++ +C+ S V G +L
Sbjct: 169 FAFGSIIKACASSSDVGLGKQL 190
>AT4G21065.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: CRR28
(CHLORORESPIRATORY REDUCTION28); endonuclease
(TAIR:AT1G59720.1); Has 14270 Blast hits to 5372
proteins in 184 species: Archae - 1; Bacteria - 4;
Metazoa - 153; Fungi - 82; Plants - 13714; Viruses - 0;
Other Eukaryotes - 316 (source: NCBI BLink). |
chr4:11245976-11247763 FORWARD
Length = 595
Score = 389 bits (1000), Expect = e-108, Method: Compositional matrix adjust.
Identities = 208/562 (37%), Positives = 330/562 (58%), Gaps = 7/562 (1%)
Query: 247 KEIHCQVIRNGLEL-DIMVQTSLIDMYAKCGK---VDYAERVFNEMTCK-NIVAWNAMIG 301
++IH IR+G+ + D + LI + YA +VF+++ N+ WN +I
Sbjct: 34 RQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFIWNTLIR 93
Query: 302 GYAINGHFLESFTCLKRMQEDNLI-PDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFL 360
GYA G+ + +F+ + M+ L+ PD T L+ + + + G+ IH IR F
Sbjct: 94 GYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFG 153
Query: 361 PHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCL 420
+ ++ +L+ +Y CG + A VF ++ EK++V+WN++I + +NG+ EEAL L+ +
Sbjct: 154 SLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEM 213
Query: 421 RNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDL 480
++ +KPD TI S+L A A++ ++ K++H Y+ K+ L+ N +SN ++ +YA+CG +
Sbjct: 214 NSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRV 273
Query: 481 QTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQN-GIEPNESTFVSLLSS 539
+ A+ FD M KN VSW ++I+ A++GFG +I+LF M+ G+ P E TFV +L +
Sbjct: 274 EEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYA 333
Query: 540 CSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTAR 599
CS G+V EG+E F M+ +Y I+ IEH+GCMVDLL R G + A ++I+ MP+ P
Sbjct: 334 CSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVV 393
Query: 600 IWGSLLTASRNNNDIFFAEFAAKHILSHDNDNTGCYVLLANMYAEAGRWEDVEQIKLVMK 659
IW +LL A + D AEFA IL + +++G YVLL+NMYA RW DV++I+ M
Sbjct: 394 IWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQML 453
Query: 660 KKGLAKTVDCCTVESKGKSQKFINNNKSHQQAYMIYDVLDIILKKIGEDVYIHSLSKFRP 719
+ G+ K VE + +F+ +KSH Q+ IY L + ++ + Y+ +S
Sbjct: 454 RDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVYV 513
Query: 720 ADVIKKKMKSPQNHSVKLAICFGLISTAIGKPIIIRKNTRICKDCHIAAKKISRVTKREI 779
++K + HS K+AI F LIST PI + KN R+C DCH+A K +S+V REI
Sbjct: 514 DVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVSKVYNREI 573
Query: 780 IVGDSKIFHHFEDGRCSCGDYW 801
+V D FHHF++G CSC DYW
Sbjct: 574 VVRDRSRFHHFKNGSCSCQDYW 595
Score = 188 bits (477), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 115/356 (32%), Positives = 186/356 (52%), Gaps = 13/356 (3%)
Query: 67 LCEFVDSGAMDNALYLFEKMNQP-DTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEG-IGI 124
L M A +F K+ +P + +IWN +IRG++ G Y M G +
Sbjct: 60 LVSLPSPPPMSYAHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEP 119
Query: 125 DNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVF 184
D T+PF+IKA + G+ +H +I+ G IYV NSL+ +Y G V A KVF
Sbjct: 120 DTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVF 179
Query: 185 EAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVR 244
+ MP +DLV+WN ++NG+ G ++L + EM G KPD +++S L C+ +
Sbjct: 180 DKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALT 239
Query: 245 GGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYA 304
GK +H +I+ GL ++ L+D+YA+CG+V+ A+ +F+EM KN V+W ++I G A
Sbjct: 240 LGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLA 299
Query: 305 INGHFLESFTCLKRMQE-DNLIPDAITMINLLPSCSKFGTLLEG-----KCIHGYAIRKM 358
+NG E+ K M+ + L+P IT + +L +CS G + EG + Y I
Sbjct: 300 VNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIE-- 357
Query: 359 FLPHLVLETALVDMYGKCGQLKFA-ECVFGRINEKNMVSWNAIIAAYVQNGRNEEA 413
P + +VD+ + GQ+K A E + + N+V W ++ A +G ++ A
Sbjct: 358 --PRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLA 411
Score = 183 bits (465), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 122/369 (33%), Positives = 196/369 (53%), Gaps = 15/369 (4%)
Query: 180 AEKVFEAM--PLRDLVSWNCMVNGYRVIGDGLKSLMCFKEML--GLGEKPDRLSMISSLG 235
A KVF + P+ + WN ++ GY IG+ + + ++EM GL E PD + +
Sbjct: 72 AHKVFSKIEKPINVFI-WNTLIRGYAEIGNSISAFSLYREMRVSGLVE-PDTHTYPFLIK 129
Query: 236 GCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVA 295
+ VR G+ IH VIR+G I VQ SL+ +YA CG V A +VF++M K++VA
Sbjct: 130 AVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVA 189
Query: 296 WNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAI 355
WN++I G+A NG E+ M + PD T+++LL +C+K G L GK +H Y I
Sbjct: 190 WNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMI 249
Query: 356 RKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALE 415
+ +L L+D+Y +CG+++ A+ +F + +KN VSW ++I NG +EA+E
Sbjct: 250 KVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIE 309
Query: 416 LFHCLRN-QTLKPDAVTIASILPAYAELATVSECKQIHAYIT---KLELSSNTFTSNAIV 471
LF + + + L P +T IL A + V E + + K+E F +V
Sbjct: 310 LFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHF--GCMV 367
Query: 472 YMYAKCGDLQTARRYFDSMSFK-NLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNE 530
+ A+ G ++ A Y SM + N+V W T++ A +HG ++ F+R++ +EPN
Sbjct: 368 DLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLA--EFARIQILQLEPNH 425
Query: 531 STFVSLLSS 539
S LLS+
Sbjct: 426 SGDYVLLSN 434
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 146/278 (52%), Gaps = 7/278 (2%)
Query: 70 FVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTF 129
+ + G + +A +F+KM + D WN +I GF+ G +E + Y M +GI D FT
Sbjct: 166 YANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTI 225
Query: 130 PFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPL 189
++ AC ++ + GK+VH +IK+GL R+++ N L+D+Y + G VE A+ +F+ M
Sbjct: 226 VSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVD 285
Query: 190 RDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGL-GEKPDRLSMISSLGGCSIGCCVRGGKE 248
++ VSW ++ G V G G +++ FK M G P ++ + L CS V+ G E
Sbjct: 286 KNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFE 345
Query: 249 IHCQVIRNGLELDIMVQT--SLIDMYAKCGKVDYAERVFNEMTCK-NIVAWNAMIGGYAI 305
+ + +R +++ ++ ++D+ A+ G+V A M + N+V W ++G +
Sbjct: 346 -YFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTV 404
Query: 306 NGHF-LESFTCLKRMQ-EDNLIPDAITMINLLPSCSKF 341
+G L F ++ +Q E N D + + N+ S ++
Sbjct: 405 HGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRW 442
>AT2G03380.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:1028292-1030361 FORWARD
Length = 689
Score = 389 bits (999), Expect = e-108, Method: Compositional matrix adjust.
Identities = 218/605 (36%), Positives = 343/605 (56%), Gaps = 10/605 (1%)
Query: 74 GAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVI 133
G +A +F+++ +PD Y+W V++R + EV+ Y + G D+ F +
Sbjct: 90 GYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKAL 149
Query: 134 KACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLV 193
KAC L GKK+H +L+K+ D V L+DMY K G ++ A KVF + LR++V
Sbjct: 150 KACTELQDLDNGKKIHCQLVKVP-SFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVV 208
Query: 194 SWNCMVNGY---RVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIH 250
W M+ GY + +GL +E LG + ++I + C+ + GK H
Sbjct: 209 CWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMA---CTKLSALHQGKWFH 265
Query: 251 CQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFL 310
++++G+EL + TSL+DMY KCG + A RVFNE + ++V W AMI GY NG
Sbjct: 266 GCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVN 325
Query: 311 ESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALV 370
E+ + ++M+ + P+ +T+ ++L C L G+ +HG +I K+ + + ALV
Sbjct: 326 EALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSI-KVGIWDTNVANALV 384
Query: 371 DMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAV 430
MY KC Q + A+ VF +EK++V+WN+II+ + QNG EAL LFH + ++++ P+ V
Sbjct: 385 HMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGV 444
Query: 431 TIASILPAYAELATVSECKQIHAYITKLEL--SSNTFTSNAIVYMYAKCGDLQTARRYFD 488
T+AS+ A A L +++ +HAY KL SS+ A++ YAKCGD Q+AR FD
Sbjct: 445 TVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFD 504
Query: 489 SMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNE 548
++ KN ++W+ MI Y G S++LF M + +PNESTF S+LS+C +G+VNE
Sbjct: 505 TIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNE 564
Query: 549 GWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTAS 608
G + F+SM DYN +HY CMVD+L R G L+ A IE+MP+ P R +G+ L
Sbjct: 565 GKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGC 624
Query: 609 RNNNDIFFAEFAAKHILSHDNDNTGCYVLLANMYAEAGRWEDVEQIKLVMKKKGLAKTVD 668
++ E K +L D+ YVL++N+YA GRW ++++ +MK++GL+K
Sbjct: 625 GMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAG 684
Query: 669 CCTVE 673
T+E
Sbjct: 685 HSTME 689
Score = 236 bits (603), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 138/442 (31%), Positives = 235/442 (53%), Gaps = 3/442 (0%)
Query: 146 KKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVI 205
++ HG L GL DI + L+ +Y FG+ + A VF+ +P D W M+ Y +
Sbjct: 61 RQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLN 120
Query: 206 GDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQ 265
+ ++ + + ++ G + D + +L C+ + GK+IHCQ+++ D +V
Sbjct: 121 KESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVP-SFDNVVL 179
Query: 266 TSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLI 325
T L+DMYAKCG++ A +VFN++T +N+V W +MI GY N E RM+E+N++
Sbjct: 180 TGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVL 239
Query: 326 PDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECV 385
+ T L+ +C+K L +GK HG ++ L T+L+DMY KCG + A V
Sbjct: 240 GNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRV 299
Query: 386 FGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATV 445
F + ++V W A+I Y NG EAL LF ++ +KP+ VTIAS+L + +
Sbjct: 300 FNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENL 359
Query: 446 SECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAY 505
+ +H K+ + +T +NA+V+MYAKC + A+ F+ S K++V+WN++I +
Sbjct: 360 ELGRSVHGLSIKVGI-WDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGF 418
Query: 506 AIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFN-SMKMDYNIDY 564
+ +G ++ LF RM + PN T SL S+C+ G + G L S+K+ +
Sbjct: 419 SQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASS 478
Query: 565 GIEHYGCMVDLLGRTGNLDAAK 586
+ ++D + G+ +A+
Sbjct: 479 SVHVGTALLDFYAKCGDPQSAR 500
Score = 225 bits (574), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 149/507 (29%), Positives = 262/507 (51%), Gaps = 14/507 (2%)
Query: 59 NSLSLTRSLCEFVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRME 118
+++ LT L + G + +A +F + + W +I G+ L +E + ++RM
Sbjct: 175 DNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMR 234
Query: 119 YEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVE 178
+ + +T+ +I AC +L + +GK HG L+K G++ + SL+DMY K G +
Sbjct: 235 ENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDIS 294
Query: 179 VAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCS 238
A +VF DLV W M+ GY G ++L F++M G+ KP+ +++ S L GC
Sbjct: 295 NARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCG 354
Query: 239 IGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNA 298
+ + G+ +H I+ G+ D V +L+ MYAKC + A+ VF + K+IVAWN+
Sbjct: 355 LIENLELGRSVHGLSIKVGI-WDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNS 413
Query: 299 MIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKM 358
+I G++ NG E+ RM +++ P+ +T+ +L +C+ G+L G +H Y+++
Sbjct: 414 IISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLG 473
Query: 359 FLP--HLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALEL 416
FL + + TAL+D Y KCG + A +F I EKN ++W+A+I Y + G +LEL
Sbjct: 474 FLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLEL 533
Query: 417 FHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITK-LELSSNTFTSNAIVYMYA 475
F + + KP+ T SIL A V+E K+ + + K + +T +V M A
Sbjct: 534 FEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLA 593
Query: 476 KCGDLQTARRYFDSMSFK-NLVSWNTMIMAYAIHG---FGTISIQLFSRMKQNGIEPNES 531
+ G+L+ A + M + ++ + + +H G I I+ K + P+++
Sbjct: 594 RAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIK-----KMLDLHPDDA 648
Query: 532 TFVSLLSSCSIS-GLVNEGWELFNSMK 557
++ L+S+ S G N+ E+ N MK
Sbjct: 649 SYYVLVSNLYASDGRWNQAKEVRNLMK 675
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 94/330 (28%), Positives = 160/330 (48%), Gaps = 4/330 (1%)
Query: 56 IKPNSLSLTRSLCEFVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYH 115
I+ +S +T L +V G + NA +F + + D +W +I G+++ G E + +
Sbjct: 273 IELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQ 332
Query: 116 RMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFG 175
+M+ I + T V+ CG + + G+ VHG IK+G+ D V N+L+ MY K
Sbjct: 333 KMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGI-WDTNVANALVHMYAKCY 391
Query: 176 FVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLG 235
A+ VFE +D+V+WN +++G+ G ++L F M P+ +++ S
Sbjct: 392 QNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFS 451
Query: 236 GCSIGCCVRGGKEIHCQVIRNGL--ELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNI 293
C+ + G +H ++ G + V T+L+D YAKCG A +F+ + KN
Sbjct: 452 ACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNT 511
Query: 294 VAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGY 353
+ W+AMIGGY G + S + M + P+ T ++L +C G + EGK
Sbjct: 512 ITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSS 571
Query: 354 AIRKM-FLPHLVLETALVDMYGKCGQLKFA 382
+ F P T +VDM + G+L+ A
Sbjct: 572 MYKDYNFTPSTKHYTCMVDMLARAGELEQA 601
>AT3G61170.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:22638691-22641237 REVERSE
Length = 783
Score = 389 bits (998), Expect = e-108, Method: Compositional matrix adjust.
Identities = 225/734 (30%), Positives = 380/734 (51%), Gaps = 44/734 (5%)
Query: 39 KSNPTKKQMSETPKRGMIKPNSLSLTRSLCEFVDSGAMDNALYLFEKMNQPDTYIWNVII 98
+ + ++ + P+R N++ + + +S + +A LF +T WN +I
Sbjct: 43 RVDEARQMFDKMPERDEFTWNTM-----IVAYSNSRRLSDAEKLFRSNPVKNTISWNALI 97
Query: 99 RGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLD 158
G+ G E + + M+ +GI + +T V++ C L+ + G+++HG IK G D
Sbjct: 98 SGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFD 157
Query: 159 RDIYVCNSLIDMYFKFGFVEVAEKVFEAMP-LRDLVSWNCMVNGYRVIGDGLKSLMCFKE 217
D+ V N L+ MY + + AE +FE M ++ V+W M+ GY G K++ CF++
Sbjct: 158 LDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRD 217
Query: 218 MLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGK 277
+ G + ++ + S L C+ R G ++HC ++++G + +I VQ++LIDMYAKC +
Sbjct: 218 LRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCRE 277
Query: 278 VDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPS 337
++ A + M ++V+WN+MI G G E+ + RM E ++ D T+ ++L
Sbjct: 278 MESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNC 337
Query: 338 CSKFGTLLE-GKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVS 396
+ T ++ H ++ + + ++ ALVDMY K G + A VF + EK+++S
Sbjct: 338 FALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVIS 397
Query: 397 WNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYIT 456
W A++ NG +EAL+LF +R + PD + AS+L A AEL + +Q+H
Sbjct: 398 WTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYI 457
Query: 457 KLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQ 516
K S+ +N++V MY KCG L+ A F+SM ++L++W +I+ YA +G
Sbjct: 458 KSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCLIVGYAKNG------- 510
Query: 517 LFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLL 576
L+ + F+SM+ Y I G EHY CM+DL
Sbjct: 511 ----------------------------LLEDAQRYFDSMRTVYGITPGPEHYACMIDLF 542
Query: 577 GRTGNLDAAKQFIEEMPLVPTARIWGSLLTASRNNNDIFFAEFAAKHILSHDNDNTGCYV 636
GR+G+ +Q + +M + P A +W ++L ASR + +I E AAK ++ + +N YV
Sbjct: 543 GRSGDFVKVEQLLHQMEVEPDATVWKAILAASRKHGNIENGERAAKTLMELEPNNAVPYV 602
Query: 637 LLANMYAEAGRWEDVEQIKLVMKKKGLAKTVDCCTVESKGKSQKFINNNKSHQQAYMIYD 696
L+NMY+ AGR ++ ++ +MK + ++K C VE KGK F++ ++ H + IY
Sbjct: 603 QLSNMYSAAGRQDEAANVRRLMKSRNISKEPGCSWVEEKGKVHSFMSEDRRHPRMVEIYS 662
Query: 697 VLDIILKKIGEDVYIHSLSKFRPADVIKK-KMKSPQNHSVKLAICFGLISTAIGKPIIIR 755
+D ++ I E Y +S F D+ K+ K HS KLA+ FGL+ G PI I
Sbjct: 663 KVDEMMLLIKEAGYFADMS-FALHDLDKEGKELGLAYHSEKLAVAFGLLVVPSGAPIRII 721
Query: 756 KNTRICKDCHIAAK 769
KN R+C DCH A K
Sbjct: 722 KNLRVCGDCHSAMK 735
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 135/289 (46%), Gaps = 31/289 (10%)
Query: 347 GKCIHGYAIRKMFLPHLVL----ETALVD----------------------MYGKCGQLK 380
G CIH YA R +L+L ++ VD Y +L
Sbjct: 17 GSCIHSYADRTKLHSNLLLGDLSKSGRVDEARQMFDKMPERDEFTWNTMIVAYSNSRRLS 76
Query: 381 FAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYA 440
AE +F KN +SWNA+I+ Y ++G EA LF +++ +KP+ T+ S+L
Sbjct: 77 DAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCT 136
Query: 441 ELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSF-KNLVSWN 499
L + +QIH + K + N ++ MYA+C + A F++M KN V+W
Sbjct: 137 SLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWT 196
Query: 500 TMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSM-KM 558
+M+ Y+ +GF +I+ F +++ G + N+ TF S+L++C+ G ++ + K
Sbjct: 197 SMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKS 256
Query: 559 DYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTA 607
+ + ++ ++D+ + +++A+ +E M V W S++
Sbjct: 257 GFKTNIYVQ--SALIDMYAKCREMESARALLEGME-VDDVVSWNSMIVG 302
>AT3G01580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:223529-225454 REVERSE
Length = 641
Score = 388 bits (997), Expect = e-108, Method: Compositional matrix adjust.
Identities = 210/629 (33%), Positives = 360/629 (57%), Gaps = 6/629 (0%)
Query: 86 MNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEG 145
M + Y WN +++ S + ++EV+ + M + DNFT P +KACG L G
Sbjct: 1 MTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELREVNYG 60
Query: 146 KKVHGKLIK-IGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRV 204
+ +HG + K + L D+YV +SLI MY K G + A ++F+ + D+V+W+ MV+G+
Sbjct: 61 EMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEK 120
Query: 205 IGDGLKSLMCFKEMLGLGE-KPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIM 263
G +++ F+ M+ + PDR+++I+ + C+ R G+ +H VIR G D+
Sbjct: 121 NGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLS 180
Query: 264 VQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDN 323
+ SL++ YAK A +F + K++++W+ +I Y NG E+ M +D
Sbjct: 181 LVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDG 240
Query: 324 LIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAE 383
P+ T++ +L +C+ L +G+ H AIRK + + TALVDMY KC + A
Sbjct: 241 TEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAY 300
Query: 384 CVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFH--CLRNQTLKPDAVTIASILPAYAE 441
VF RI K++VSW A+I+ + NG ++E F L N T +PDA+ + +L + +E
Sbjct: 301 AVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNT-RPDAILMVKVLGSCSE 359
Query: 442 LATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTM 501
L + + K H+Y+ K SN F ++V +Y++CG L A + F+ ++ K+ V W ++
Sbjct: 360 LGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSL 419
Query: 502 IMAYAIHGFGTISIQLFSRM-KQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDY 560
I Y IHG GT +++ F+ M K + ++PNE TF+S+LS+CS +GL++EG +F M DY
Sbjct: 420 ITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDY 479
Query: 561 NIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTASRNNNDIFFAEFA 620
+ +EHY +VDLLGR G+LD A + + MP PT +I G+LL A R + + AE
Sbjct: 480 RLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETV 539
Query: 621 AKHILSHDNDNTGCYVLLANMYAEAGRWEDVEQIKLVMKKKGLAKTVDCCTVESKGKSQK 680
AK + ++++ G Y+L++N+Y G WE+VE+++ +K++G+ K + +E + K +
Sbjct: 540 AKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGLAESLIEIRRKVHR 599
Query: 681 FINNNKSHQQAYMIYDVLDIILKKIGEDV 709
F+ +++ H + +Y +L + + ED+
Sbjct: 600 FVADDELHPEKEPVYGLLKELDLHMKEDL 628
Score = 236 bits (602), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 150/499 (30%), Positives = 264/499 (52%), Gaps = 18/499 (3%)
Query: 70 FVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEG-IGIDNFT 128
++ G M AL +F+++ +PD W+ ++ GF G + ++F+ RM + D T
Sbjct: 87 YIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVT 146
Query: 129 FPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMP 188
++ AC +L + G+ VHG +I+ G D+ + NSL++ Y K + A +F+ +
Sbjct: 147 LITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIA 206
Query: 189 LRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKE 248
+D++SW+ ++ Y G ++L+ F +M+ G +P+ +++ L C+ + G++
Sbjct: 207 EKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRK 266
Query: 249 IHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAING- 307
H IR GLE ++ V T+L+DMY KC + A VF+ + K++V+W A+I G+ +NG
Sbjct: 267 THELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGM 326
Query: 308 --HFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVL 365
+E F+ + + E+N PDAI M+ +L SCS+ G L + KC H Y I+ F + +
Sbjct: 327 AHRSIEEFSIM--LLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFI 384
Query: 366 ETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELF-HCLRNQT 424
+LV++Y +CG L A VF I K+ V W ++I Y +G+ +ALE F H +++
Sbjct: 385 GASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSE 444
Query: 425 LKPDAVTIASILPAYAELATVSECKQIHAY-ITKLELSSNTFTSNAIVYMYAKCGDLQTA 483
+KP+ VT SIL A + + E +I + L+ N +V + + GDL TA
Sbjct: 445 VKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTA 504
Query: 484 RRYFDSMSFKNLVS-WNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSI 542
M F T++ A IH G ++ + ++ + +E N + + L+S ++
Sbjct: 505 IEITKRMPFSPTPQILGTLLGACRIHQNGEMAETVAKKLFE--LESNHAGYYMLMS--NV 560
Query: 543 SGLVNEGWE----LFNSMK 557
G+ E WE L NS+K
Sbjct: 561 YGVKGE-WENVEKLRNSVK 578
Score = 156 bits (394), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 100/335 (29%), Positives = 170/335 (50%), Gaps = 6/335 (1%)
Query: 52 KRGMIKPNSLSLTRSLCE-FVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEV 110
+RG N LSL SL + S A A+ LF+ + + D W+ +I + G E
Sbjct: 172 RRGF--SNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEA 229
Query: 111 IDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDM 170
+ ++ M +G + T V++AC +G+K H I+ GL+ ++ V +L+DM
Sbjct: 230 LLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDM 289
Query: 171 YFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEM-LGLGEKPDRLS 229
Y K E A VF +P +D+VSW +++G+ + G +S+ F M L +PD +
Sbjct: 290 YMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAIL 349
Query: 230 MISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMT 289
M+ LG CS + K H VI+ G + + + SL+++Y++CG + A +VFN +
Sbjct: 350 MVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIA 409
Query: 290 CKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLI-PDAITMINLLPSCSKFGTLLEGK 348
K+ V W ++I GY I+G ++ M + + + P+ +T +++L +CS G + EG
Sbjct: 410 LKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGL 469
Query: 349 CIHGYAIRKMFL-PHLVLETALVDMYGKCGQLKFA 382
I + L P+L LVD+ G+ G L A
Sbjct: 470 RIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTA 504
>AT4G14850.1 | Symbols: LOI1 | LOI1 (lovastatin insensitive 1) |
chr4:8513947-8516275 FORWARD
Length = 684
Score = 388 bits (996), Expect = e-108, Method: Compositional matrix adjust.
Identities = 231/662 (34%), Positives = 352/662 (53%), Gaps = 7/662 (1%)
Query: 145 GKKVHGKLIKIGLDRDI--YVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGY 202
G+ VH +++K LD ++ N LI+MY K E A V P R++VSW +++G
Sbjct: 25 GRVVHARIVKT-LDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGL 83
Query: 203 RVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDI 262
G +L+ F EM G P+ + + + GK+IH ++ G LD+
Sbjct: 84 AQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDV 143
Query: 263 MVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQED 322
V S DMY K D A ++F+E+ +N+ WNA I +G E+ +
Sbjct: 144 FVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRI 203
Query: 323 NLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFA 382
+ P++IT L +CS + L G +HG +R F + + L+D YGKC Q++ +
Sbjct: 204 DGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSS 263
Query: 383 ECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAEL 442
E +F + KN VSW +++AAYVQN +E+A L+ R ++ I+S+L A A +
Sbjct: 264 EIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGM 323
Query: 443 ATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMI 502
A + + IHA+ K + F +A+V MY KCG ++ + + FD M KNLV+ N++I
Sbjct: 324 AGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLI 383
Query: 503 MAYAIHGFGTISIQLFSRMKQNGI--EPNESTFVSLLSSCSISGLVNEGWELFNSMKMDY 560
YA G +++ LF M G PN TFVSLLS+CS +G V G ++F+SM+ Y
Sbjct: 384 GGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTY 443
Query: 561 NIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTASRNNNDIFFAEFA 620
I+ G EHY C+VD+LGR G ++ A +FI++MP+ PT +WG+L A R + A
Sbjct: 444 GIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLA 503
Query: 621 AKHILSHDNDNTGCYVLLANMYAEAGRWEDVEQIKLVMKKKGLAKTVDCCTVESKGKSQK 680
A+++ D ++G +VLL+N +A AGRW + ++ +K G+ K + K +
Sbjct: 504 AENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHA 563
Query: 681 FINNNKSHQQAYMIYDVLDIILKKIGEDVYIHSLSKFRPADV-IKKKMKSPQNHSVKLAI 739
F ++SH I L + ++ Y L K D+ ++K +HS KLA+
Sbjct: 564 FQAKDRSHILNKEIQTTLAKLRNEMEAAGYKPDL-KLSLYDLEEEEKAAEVSHHSEKLAL 622
Query: 740 CFGLISTAIGKPIIIRKNTRICKDCHIAAKKISRVTKREIIVGDSKIFHHFEDGRCSCGD 799
FGL+S + PI I KN RIC DCH K +S KREIIV D+ FH F+DG CSC D
Sbjct: 623 AFGLLSLPLSVPIRITKNLRICGDCHSFFKFVSGSVKREIIVRDNNRFHRFKDGICSCKD 682
Query: 800 YW 801
YW
Sbjct: 683 YW 684
Score = 192 bits (489), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 120/421 (28%), Positives = 208/421 (49%), Gaps = 6/421 (1%)
Query: 94 WNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLI 153
W +I G + G F + + M EG+ ++FTFP KA L + GK++H +
Sbjct: 76 WTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAV 135
Query: 154 KIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLM 213
K G D++V S DMY K + A K+F+ +P R+L +WN ++ G +++
Sbjct: 136 KCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIE 195
Query: 214 CFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYA 273
F E + P+ ++ + L CS + G ++H V+R+G + D+ V LID Y
Sbjct: 196 AFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYG 255
Query: 274 KCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMIN 333
KC ++ +E +F EM KN V+W +++ Y N H E + L +++ + MI+
Sbjct: 256 KCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQN-HEDEKASVLYLRSRKDIVETSDFMIS 314
Query: 334 -LLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEK 392
+L +C+ L G+ IH +A++ + + +ALVDMYGKCG ++ +E F + EK
Sbjct: 315 SVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEK 374
Query: 393 NMVSWNAIIAAYVQNGRNEEALELFHCL--RNQTLKPDAVTIASILPAYAELATVSECKQ 450
N+V+ N++I Y G+ + AL LF + R P+ +T S+L A + V +
Sbjct: 375 NLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMK 434
Query: 451 IHAYI-TKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVS-WNTMIMAYAIH 508
I + + + + IV M + G ++ A + M + +S W + A +H
Sbjct: 435 IFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMH 494
Query: 509 G 509
G
Sbjct: 495 G 495
Score = 136 bits (343), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 100/347 (28%), Positives = 173/347 (49%), Gaps = 14/347 (4%)
Query: 77 DNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIG--IDNFTFPFVIK 134
D+A LF+++ + + WN I G +E I+ + +E+ I ++ TF +
Sbjct: 160 DDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAF--IEFRRIDGHPNSITFCAFLN 217
Query: 135 ACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVS 194
AC L G ++HG +++ G D D+ VCN LID Y K + +E +F M ++ VS
Sbjct: 218 ACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVS 277
Query: 195 WNCMVNGY-RVIGDGLKSLMCFKEMLGLGEKPDRLSMISS-LGGCSIGCCVRGGKEIHCQ 252
W +V Y + D S++ + + E D MISS L C+ + G+ IH
Sbjct: 278 WCSLVAAYVQNHEDEKASVLYLRSRKDIVETSD--FMISSVLSACAGMAGLELGRSIHAH 335
Query: 253 VIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLES 312
++ +E I V ++L+DMY KCG ++ +E+ F+EM KN+V N++IGGYA G +
Sbjct: 336 AVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMA 395
Query: 313 FTCLKRMQEDNL--IPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMF--LPHLVLETA 368
+ M P+ +T ++LL +CS+ G + G I ++R + P +
Sbjct: 396 LALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFD-SMRSTYGIEPGAEHYSC 454
Query: 369 LVDMYGKCGQLKFAECVFGRINEKNMVS-WNAIIAAYVQNGRNEEAL 414
+VDM G+ G ++ A ++ + +S W A+ A +G+ + L
Sbjct: 455 IVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGL 501
>AT5G13270.1 | Symbols: RARE1 | pentatricopeptide (PPR)
repeat-containing protein | chr5:4246954-4249212 REVERSE
Length = 752
Score = 388 bits (996), Expect = e-108, Method: Compositional matrix adjust.
Identities = 226/721 (31%), Positives = 381/721 (52%), Gaps = 14/721 (1%)
Query: 85 KMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIE 144
K++ + N+ + S E +F M+ G+ + ++++ + +AC L S
Sbjct: 42 KISHKQGQVENLHLVSLSKHRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSH 101
Query: 145 GKKVHGKLIKIGLDR-DIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYR 203
G+ +H ++ ++G++ + + N ++ MY + +E A+K+F+ M + VS M++ Y
Sbjct: 102 GRLLHDRM-RMGIENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYA 160
Query: 204 VIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIM 263
G K++ F ML G+KP + L + G++IH VIR GL +
Sbjct: 161 EQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTS 220
Query: 264 VQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDN 323
++T +++MY KCG + A+RVF++M K VA ++ GY G ++ + +
Sbjct: 221 IETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEG 280
Query: 324 LIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAE 383
+ D+ +L +C+ L GK IH + + + T LVD Y KC + A
Sbjct: 281 VEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESAC 340
Query: 384 CVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLK-PDAVTIASILPAYAEL 442
F I E N VSW+AII+ Y Q + EEA++ F LR++ ++ T SI A + L
Sbjct: 341 RAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVL 400
Query: 443 ATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMI 502
A + Q+HA K L + + +A++ MY+KCG L A F+SM ++V+W I
Sbjct: 401 ADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFI 460
Query: 503 MAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNI 562
+A +G + +++LF +M G++PN TF+++L++CS +GLV +G ++M YN+
Sbjct: 461 SGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNV 520
Query: 563 DYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTASRNNNDIFFAEFAAK 622
I+HY CM+D+ R+G LD A +F++ MP P A W L+ + ++ E A +
Sbjct: 521 APTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGE 580
Query: 623 HILSHDNDNTGCYVLLANMYAEAGRWEDVEQIKLVMKKKGLAKTVDCCTVESKGKSQKFI 682
+ D ++T YVL N+Y AG+WE+ ++ +M ++ L K + C ++ KGK +FI
Sbjct: 581 ELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEMMKLMNERMLKKELSCSWIQEKGKIHRFI 640
Query: 683 NNNKSHQQAYMIYDVLDIILKKIGEDVYIHSLSKFRPADVIKKKMKSPQNHSVKLAICFG 742
+K H Q IY+ L + D++ ++++ R + +HS +LAI FG
Sbjct: 641 VGDKHHPQTQEIYEKLKEFDGFMEGDMFQCNMTERREQLL---------DHSERLAIAFG 691
Query: 743 LISTAIGKPIIIR--KNTRICKDCHIAAKKISRVTKREIIVGDSKIFHHFEDGRCSCGDY 800
LIS P I+ KN R C DCH AK +S VT EI++ DS+ FHHF++G+CSC DY
Sbjct: 692 LISVHGNAPAPIKVFKNLRACPDCHEFAKHVSLVTGHEIVIRDSRRFHHFKEGKCSCNDY 751
Query: 801 W 801
W
Sbjct: 752 W 752
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 96/375 (25%), Positives = 176/375 (46%), Gaps = 6/375 (1%)
Query: 32 LVNPRIRKSNPTKKQMSETPKRGMIKPNSLSLTRSLCEFVDSGAMDNALYLFEKMNQPDT 91
LVNPR +Q+ R + N+ T + +V G + A +F++M
Sbjct: 194 LVNPRALDFG---RQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKP 250
Query: 92 YIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGK 151
++ G++ G ++ + + + EG+ D+F F V+KAC L GK++H
Sbjct: 251 VACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHAC 310
Query: 152 LIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKS 211
+ K+GL+ ++ V L+D Y K E A + F+ + + VSW+ +++GY + ++
Sbjct: 311 VAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEA 370
Query: 212 LMCFKEMLGLGEK-PDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLID 270
+ FK + + + S CS+ G ++H I+ L +++LI
Sbjct: 371 VKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALIT 430
Query: 271 MYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAIT 330
MY+KCG +D A VF M +IVAW A I G+A G+ E+ ++M + P+++T
Sbjct: 431 MYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVT 490
Query: 331 MINLLPSCSKFGTLLEGK-CIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRI 389
I +L +CS G + +GK C+ + P + ++D+Y + G L A +
Sbjct: 491 FIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNM 550
Query: 390 N-EKNMVSWNAIIAA 403
E + +SW ++
Sbjct: 551 PFEPDAMSWKCFLSG 565
>AT3G49710.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:18437845-18440010 FORWARD
Length = 721
Score = 388 bits (996), Expect = e-108, Method: Compositional matrix adjust.
Identities = 228/654 (34%), Positives = 363/654 (55%), Gaps = 17/654 (2%)
Query: 160 DIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEML 219
+++ N ++ Y K + +A ++F+ +P D VS+N +++GY + +++ FK M
Sbjct: 73 NVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMR 132
Query: 220 GLGEKPDRLSMISSLGGCSIGCCVRGG--KEIHCQVIRNGLELDIMVQTSLIDMYAKCGK 277
LG + D + L G CC R K++HC + G + V + + Y+K G
Sbjct: 133 KLGFEVDGFT----LSGLIAACCDRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGL 188
Query: 278 VDYAERVFNEM-TCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLP 336
+ A VF M ++ V+WN+MI Y + ++ K M D T+ ++L
Sbjct: 189 LREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLN 248
Query: 337 SCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQ---LKFAECVFGRINEKN 393
+ + L+ G+ HG I+ F + + + L+D Y KCG + +E VF I +
Sbjct: 249 ALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPD 308
Query: 394 MVSWNAIIAAYVQNGR-NEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIH 452
+V WN +I+ Y N +EEA++ F ++ +PD + + A + L++ S+CKQIH
Sbjct: 309 LVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIH 368
Query: 453 AYITKLELSSNTFT-SNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFG 511
K + SN + +NA++ +Y K G+LQ AR FD M N VS+N MI YA HG G
Sbjct: 369 GLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHG 428
Query: 512 TISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGC 571
T ++ L+ RM +GI PN+ TFV++LS+C+ G V+EG E FN+MK + I+ EHY C
Sbjct: 429 TEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSC 488
Query: 572 MVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTASRNNNDIFFAEFAAKHILSHDNDN 631
M+DLLGR G L+ A++FI+ MP P + W +LL A R + ++ AE AA ++
Sbjct: 489 MIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLA 548
Query: 632 TGCYVLLANMYAEAGRWEDVEQIKLVMKKKGLAKTVDCCTVESKGKSQKFINNNKSHQQA 691
YV+LANMYA+A +WE++ ++ M+ K + K C +E K K F+ + SH
Sbjct: 549 ATPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMI 608
Query: 692 YMIYDVLDIILKKIGEDVYIH----SLSKFRPADVIKKKMKSPQNHSVKLAICFGLISTA 747
+ + L+ ++KK+ + Y+ ++ K A ++M+ +HS KLA+ FGL+ST
Sbjct: 609 REVNEYLEEMMKKMKKVGYVMDKKWAMVKEDEAGEGDEEMR-LGHHSEKLAVAFGLMSTR 667
Query: 748 IGKPIIIRKNTRICKDCHIAAKKISRVTKREIIVGDSKIFHHFEDGRCSCGDYW 801
G+ +++ KN RIC DCH A K +S V REIIV D+ FH F+DG+CSCGDYW
Sbjct: 668 DGEELVVVKNLRICGDCHNAIKFMSAVAGREIIVRDNLRFHCFKDGKCSCGDYW 721
Score = 209 bits (531), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 140/463 (30%), Positives = 232/463 (50%), Gaps = 16/463 (3%)
Query: 57 KPNSLSLTRSLCEFVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHR 116
+PN S + + + A LF+++ QPDT +N +I G+++ + + R
Sbjct: 71 EPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKR 130
Query: 117 MEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGF 176
M G +D FT +I AC + I K++H + G D V N+ + Y K G
Sbjct: 131 MRKLGFEVDGFTLSGLIAACCDRVDLI--KQLHCFSVSGGFDSYSSVNNAFVTYYSKGGL 188
Query: 177 VEVAEKVFEAM-PLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLG 235
+ A VF M LRD VSWN M+ Y +G K+L +KEM+ G K D ++ S L
Sbjct: 189 LREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLN 248
Query: 236 GCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDY---AERVFNEMTCKN 292
+ + GG++ H ++I+ G + V + LID Y+KCG D +E+VF E+ +
Sbjct: 249 ALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPD 308
Query: 293 IVAWNAMIGGYAINGHFL-ESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIH 351
+V WN MI GY++N E+ ++MQ PD + + + +CS + + K IH
Sbjct: 309 LVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIH 368
Query: 352 GYAIRKMFLP--HLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGR 409
G AI K +P + + AL+ +Y K G L+ A VF R+ E N VS+N +I Y Q+G
Sbjct: 369 GLAI-KSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGH 427
Query: 410 NEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYIT---KLELSSNTFT 466
EAL L+ + + + P+ +T ++L A A V E ++ + K+E + ++
Sbjct: 428 GTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYS 487
Query: 467 SNAIVYMYAKCGDLQTARRYFDSMSFK-NLVSWNTMIMAYAIH 508
++ + + G L+ A R+ D+M +K V+W ++ A H
Sbjct: 488 --CMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKH 528
Score = 129 bits (325), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 88/340 (25%), Positives = 166/340 (48%), Gaps = 7/340 (2%)
Query: 259 ELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKR 318
E ++ ++ YAK K+ A ++F+E+ + V++N +I GYA + KR
Sbjct: 71 EPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKR 130
Query: 319 MQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQ 378
M++ D T+ L+ +C L+ K +H +++ F + + A V Y K G
Sbjct: 131 MRKLGFEVDGFTLSGLIAACCDRVDLI--KQLHCFSVSGGFDSYSSVNNAFVTYYSKGGL 188
Query: 379 LKFAECVFGRINE-KNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILP 437
L+ A VF ++E ++ VSWN++I AY Q+ +AL L+ + + K D T+AS+L
Sbjct: 189 LREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLN 248
Query: 438 AYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCG---DLQTARRYFDSMSFKN 494
A L + +Q H + K N+ + ++ Y+KCG + + + F + +
Sbjct: 249 ALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPD 308
Query: 495 LVSWNTMIMAYAIH-GFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELF 553
LV WNTMI Y+++ +++ F +M++ G P++ +FV + S+CS ++ ++
Sbjct: 309 LVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIH 368
Query: 554 NSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMP 593
+ I ++ L ++GNL A+ + MP
Sbjct: 369 GLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMP 408
Score = 90.1 bits (222), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/309 (22%), Positives = 133/309 (43%), Gaps = 45/309 (14%)
Query: 344 LLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAA 403
L GK +H ++ + L V++Y KCG+L +A F E N+ S+N I+ A
Sbjct: 24 LFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKA 83
Query: 404 YVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAEL--------------------- 442
Y ++ + A +LF ++ +PD V+ +++ YA+
Sbjct: 84 YAKDSKIHIARQLF----DEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVD 139
Query: 443 -----ATVSEC-------KQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSM 490
++ C KQ+H + S + +NA V Y+K G L+ A F M
Sbjct: 140 GFTLSGLIAACCDRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGM 199
Query: 491 -SFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSS-CSISGLVNE 548
++ VSWN+MI+AY H G ++ L+ M G + + T S+L++ S+ L+
Sbjct: 200 DELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLI-- 257
Query: 549 GWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDA---AKQFIEEMPLVPTARIWGSLL 605
G F+ + ++D + G D +++ +E+ L P +W +++
Sbjct: 258 GGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEI-LSPDLVVWNTMI 316
Query: 606 TASRNNNDI 614
+ N ++
Sbjct: 317 SGYSMNEEL 325
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 97/196 (49%), Gaps = 16/196 (8%)
Query: 14 YKPDDASFKQMGAPKRDLLVNPRIRKSNPTK-KQMSETPKRGMIKPNSLSLTRSLCE-FV 71
++PDD SF + + +L S+P++ KQ+ + I N +S+ +L +
Sbjct: 341 HRPDDCSFVCVTSACSNL--------SSPSQCKQIHGLAIKSHIPSNRISVNNALISLYY 392
Query: 72 DSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPF 131
SG + +A ++F++M + + +N +I+G++ G E + Y RM GI + TF
Sbjct: 393 KSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVA 452
Query: 132 VIKACGRLLSFIEGKKVHGKL---IKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMP 188
V+ AC EG++ + KI + + Y C +ID+ + G +E AE+ +AMP
Sbjct: 453 VLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSC--MIDLLGRAGKLEEAERFIDAMP 510
Query: 189 LRD-LVSWNCMVNGYR 203
+ V+W ++ R
Sbjct: 511 YKPGSVAWAALLGACR 526
>AT2G13600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:5671493-5673586 FORWARD
Length = 697
Score = 385 bits (990), Expect = e-107, Method: Compositional matrix adjust.
Identities = 227/694 (32%), Positives = 368/694 (53%), Gaps = 69/694 (9%)
Query: 55 MIKPNSLSLTRSLCEFVDSGAMDNALYLFEKMNQPDTYI----WNVIIRGFSNKGLFQ-E 109
M + L L L F DS L K Y+ +VI GFSN+ Q
Sbjct: 1 MATKSFLKLAADLSSFTDSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNR 60
Query: 110 VIDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLID 169
+ID Y + CG S +G++V K+ + R+IY NS++
Sbjct: 61 LIDAYSK-------------------CG---SLEDGRQVFDKMPQ----RNIYTWNSVVT 94
Query: 170 MYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLS 229
K GF++ A+ +F +MP RD +WN MV+G+ ++L F M G + S
Sbjct: 95 GLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYS 154
Query: 230 MISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMT 289
S L CS + G ++H + ++ D+ + ++L+DMY+KCG V+ A+RVF+EM
Sbjct: 155 FASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMG 214
Query: 290 CKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKC 349
+N+V+WN++I + NG +E+ + M E + PD +T+ +++ +C+ + G+
Sbjct: 215 DRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQE 274
Query: 350 IHGYAIRKMFLPH-LVLETALVDMYGKCGQLKFAECVFG--------------------- 387
+HG ++ L + ++L A VDMY KC ++K A +F
Sbjct: 275 VHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAA 334
Query: 388 ----------RINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILP 437
++ E+N+VSWNA+IA Y QNG NEEAL LF L+ +++ P + A+IL
Sbjct: 335 STKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILK 394
Query: 438 AYAELATVSECKQIHAYITKLEL------SSNTFTSNAIVYMYAKCGDLQTARRYFDSMS 491
A A+LA + Q H ++ K + F N+++ MY KCG ++ F M
Sbjct: 395 ACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMM 454
Query: 492 FKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWE 551
++ VSWN MI+ +A +G+G +++LF M ++G +P+ T + +LS+C +G V EG
Sbjct: 455 ERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRH 514
Query: 552 LFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTASRNN 611
F+SM D+ + +HY CMVDLLGR G L+ AK IEEMP+ P + IWGSLL A + +
Sbjct: 515 YFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVH 574
Query: 612 NDIFFAEFAAKHILSHDNDNTGCYVLLANMYAEAGRWEDVEQIKLVMKKKGLAKTVDCCT 671
+I ++ A+ +L + N+G YVLL+NMYAE G+WEDV ++ M+K+G+ K C
Sbjct: 575 RNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSW 634
Query: 672 VESKGKSQKFINNNKSHQQAYMIYDVLDIILKKI 705
++ +G F+ +KSH + I+ +LDI++ ++
Sbjct: 635 IKIQGHDHVFMVKDKSHPRKKQIHSLLDILIAEM 668
>AT5G40410.1 | Symbols: | INVOLVED IN: biological_process unknown;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT1G08070.1); Has 12213 Blast hits to 4641
proteins in 127 species: Archae - 0; Bacteria - 0;
Metazoa - 61; Fungi - 12; Plants - 12006; Viruses - 0;
Other Eukaryotes - 134 (source: NCBI BLink). |
chr5:16171385-16173211 FORWARD
Length = 608
Score = 385 bits (989), Expect = e-107, Method: Compositional matrix adjust.
Identities = 211/579 (36%), Positives = 331/579 (57%), Gaps = 12/579 (2%)
Query: 229 SMISSLGGC-SIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNE 287
S+I+++ C SI C + +HC+V+++ + L+ Y + G AE++F+E
Sbjct: 36 SLIAAVKSCVSIELC----RLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDE 91
Query: 288 MTCKNIVAWNAMIGGYAINGHFLESFTCLKRM--QEDNLIPDAITMINLLPSCSKFGTLL 345
M +++V+WN++I GY+ G+ + F L RM E P+ +T ++++ +C G+
Sbjct: 92 MPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKE 151
Query: 346 EGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYV 405
EG+CIHG ++ L + + A ++ YGK G L + +F ++ KN+VSWN +I ++
Sbjct: 152 EGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHL 211
Query: 406 QNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTF 465
QNG E+ L F+ R +PD T ++L + ++ V + IH I S N
Sbjct: 212 QNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKC 271
Query: 466 TSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNG 525
+ A++ +Y+K G L+ + F ++ + ++W M+ AYA HGFG +I+ F M G
Sbjct: 272 ITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYG 331
Query: 526 IEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAA 585
I P+ TF LL++CS SGLV EG F +M Y ID ++HY CMVDLLGR+G L A
Sbjct: 332 ISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDA 391
Query: 586 KQFIEEMPLVPTARIWGSLLTASRNNNDIFFAEFAAKHILSHDNDNTGCYVLLANMYAEA 645
I+EMP+ P++ +WG+LL A R D AA+ + + + YV+L+N+Y+ +
Sbjct: 392 YGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNIYSAS 451
Query: 646 GRWEDVEQIKLVMKKKGLAKTVDCCTVESKGKSQKFINNNKSHQQAYMIYDVLDIILKKI 705
G W+D +I+ +MK+KGL + C +E K KF+ + SH ++ I L I KK+
Sbjct: 452 GLWKDASRIRNLMKQKGLVRASGCSYIEHGNKIHKFVVGDWSHPESEKIQKKLKEIRKKM 511
Query: 706 GEDVYIHSLSKFRPADV---IKKKMKSPQNHSVKLAICFGLISTAIGKPIIIRKNTRICK 762
++ S ++F DV +K++M HS K+A+ FGL+ + +PIIIRKN RIC
Sbjct: 512 KSEMGYKSKTEFVLHDVGEDVKEEM--INQHSEKIAMAFGLLVVSPMEPIIIRKNLRICG 569
Query: 763 DCHIAAKKISRVTKREIIVGDSKIFHHFEDGRCSCGDYW 801
DCH AK IS + KR II+ DSK FHHF DG CSC DYW
Sbjct: 570 DCHETAKAISLIEKRRIIIRDSKRFHHFLDGSCSCSDYW 608
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 113/418 (27%), Positives = 203/418 (48%), Gaps = 13/418 (3%)
Query: 148 VHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGD 207
+H K++K R ++ + L+ Y + G AEK+F+ MP RDLVSWN +++GY G
Sbjct: 53 LHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGY 112
Query: 208 GLKSLMCFKEML--GLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQ 265
K M+ +G +P+ ++ +S + C G G+ IH V++ G+ ++ V
Sbjct: 113 LGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVV 172
Query: 266 TSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAING---HFLESFTCLKRMQED 322
+ I+ Y K G + + ++F +++ KN+V+WN MI + NG L F +R+ +
Sbjct: 173 NAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHE 232
Query: 323 NLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFA 382
PD T + +L SC G + + IHG + F + + TAL+D+Y K G+L+ +
Sbjct: 233 ---PDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDS 289
Query: 383 ECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAEL 442
VF I + ++W A++AAY +G +A++ F + + + PD VT +L A +
Sbjct: 290 STVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHS 349
Query: 443 ATVSECKQIHAYITK-LELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVS-WNT 500
V E K ++K + + +V + + G LQ A M + W
Sbjct: 350 GLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGA 409
Query: 501 MIMAYAIHGFGTISIQLFSRMKQNGIEPNES-TFVSLLSSCSISGLVNEGWELFNSMK 557
++ A ++ + + R+ + +EP + +V L + S SGL + + N MK
Sbjct: 410 LLGACRVYKDTQLGTKAAERLFE--LEPRDGRNYVMLSNIYSASGLWKDASRIRNLMK 465
Score = 152 bits (384), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 99/329 (30%), Positives = 170/329 (51%), Gaps = 10/329 (3%)
Query: 82 LFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGI--DNFTFPFVIKACGRL 139
LF++M + D WN +I G+S +G + + RM +G + TF +I AC
Sbjct: 88 LFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYG 147
Query: 140 LSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMV 199
S EG+ +HG ++K G+ ++ V N+ I+ Y K G + + K+FE + +++LVSWN M+
Sbjct: 148 GSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMI 207
Query: 200 NGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLE 259
+ G K L F +G +PD+ + ++ L C VR + IH ++ G
Sbjct: 208 VIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFS 267
Query: 260 LDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRM 319
+ + T+L+D+Y+K G+++ + VF+E+T + +AW AM+ YA +G ++ + M
Sbjct: 268 GNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELM 327
Query: 320 QEDNLIPDAITMINLLPSCSKFGTLLEGK-CIHGYAIRKMFLPHLVLETALVDMYGKCGQ 378
+ PD +T +LL +CS G + EGK + R P L + +VD+ G+ G
Sbjct: 328 VHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGL 387
Query: 379 LKFAECVFGRINEKNMVS----WNAIIAA 403
L+ A +G I E M W A++ A
Sbjct: 388 LQDA---YGLIKEMPMEPSSGVWGALLGA 413
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 108/236 (45%), Gaps = 13/236 (5%)
Query: 432 IASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMS 491
++S++ A ++ C+ +H + K + F + +V Y + G A + FD M
Sbjct: 34 VSSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMP 93
Query: 492 FKNLVSWNTMIMAYAIHGFGTISIQLFSRM--KQNGIEPNESTFVSLLSSCSISGLVNEG 549
++LVSWN++I Y+ G+ ++ SRM + G PNE TF+S++S+C G EG
Sbjct: 94 ERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEG 153
Query: 550 WELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTASR 609
+ + M + + ++ ++ G+TG+L ++ + E++ + W +++
Sbjct: 154 -RCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLS-IKNLVSWNTMIVIHL 211
Query: 610 NNN--DIFFAEFAAKHILSHDNDNTGCYVLLANMYAEAGRWEDVEQIKLVMKKKGL 663
N + A F + H+ D +L + ED+ ++L GL
Sbjct: 212 QNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSC-------EDMGVVRLAQGIHGL 260
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 107/233 (45%), Gaps = 4/233 (1%)
Query: 73 SGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFV 132
+G + ++ LFE ++ + WN +I GL ++ + +++ G D TF V
Sbjct: 182 TGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAV 241
Query: 133 IKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDL 192
+++C + + +HG ++ G + + +L+D+Y K G +E + VF + D
Sbjct: 242 LRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDS 301
Query: 193 VSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQ 252
++W M+ Y G G ++ F+ M+ G PD ++ L CS V GK + +
Sbjct: 302 MAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKH-YFE 360
Query: 253 VIRNGLELDIMVQ--TSLIDMYAKCGKVDYAERVFNEMTCK-NIVAWNAMIGG 302
+ +D + + ++D+ + G + A + EM + + W A++G
Sbjct: 361 TMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGA 413
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 64/138 (46%), Gaps = 6/138 (4%)
Query: 74 GAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVI 133
G ++++ +F ++ PD+ W ++ ++ G ++ I + M + GI D+ TF ++
Sbjct: 284 GRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLL 343
Query: 134 KACGRLLSFIEGK---KVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLR 190
AC EGK + K +I D Y C ++D+ + G ++ A + + MP+
Sbjct: 344 NACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSC--MVDLLGRSGLLQDAYGLIKEMPME 401
Query: 191 DLVS-WNCMVNGYRVIGD 207
W ++ RV D
Sbjct: 402 PSSGVWGALLGACRVYKD 419
>AT3G63370.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:23402080-23405991 FORWARD
Length = 1017
Score = 384 bits (986), Expect = e-106, Method: Compositional matrix adjust.
Identities = 218/670 (32%), Positives = 373/670 (55%), Gaps = 4/670 (0%)
Query: 76 MDNALYLFEKMNQP-DTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIK 134
+ A LF+ + D +WN I+ +S G E ++ + M G +++T +
Sbjct: 196 LSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALT 255
Query: 135 ACGRLLSFIEGKKVHGKLIKIGL-DRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLV 193
AC GK++H ++K ++YVCN+LI MY + G + AE++ M D+V
Sbjct: 256 ACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVV 315
Query: 194 SWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQV 253
+WN ++ GY ++L F +M+ G K D +SM S + + G E+H V
Sbjct: 316 TWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYV 375
Query: 254 IRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESF 313
I++G + ++ V +LIDMY+KC Y R F M K++++W +I GYA N +E+
Sbjct: 376 IKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEAL 435
Query: 314 TCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMY 373
+ + + + D + + ++L + S ++L K IH + +RK L V++ LVD+Y
Sbjct: 436 ELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLD-TVIQNELVDVY 494
Query: 374 GKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIA 433
GKC + +A VF I K++VSW ++I++ NG EA+ELF + L D+V +
Sbjct: 495 GKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALL 554
Query: 434 SILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFK 493
IL A A L+ +++ ++IH Y+ + + A+V MYA CGDLQ+A+ FD + K
Sbjct: 555 CILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERK 614
Query: 494 NLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELF 553
L+ + +MI AY +HG G +++LF +M+ + P+ +F++LL +CS +GL++EG
Sbjct: 615 GLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFL 674
Query: 554 NSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTASRNNND 613
M+ +Y ++ EHY C+VD+LGR + A +F++ M PTA +W +LL A R++++
Sbjct: 675 KIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSE 734
Query: 614 IFFAEFAAKHILSHDNDNTGCYVLLANMYAEAGRWEDVEQIKLVMKKKGLAKTVDCCTVE 673
E AA+ +L + N G VL++N++AE GRW DVE+++ MK G+ K C +E
Sbjct: 735 KEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIE 794
Query: 674 SKGKSQKFINNNKSHQQAYMIYDVLDIILKKIGEDVYIHSLSKFRPADVIK-KKMKSPQN 732
GK KF +KSH ++ IY+ L + +K+ +V + +KF +V + +K++
Sbjct: 795 MDGKVHKFTARDKSHPESKEIYEKLSEVTRKLEREVGYVADTKFVLHNVDEGEKVQMLHG 854
Query: 733 HSVKLAICFG 742
HS ++AI +G
Sbjct: 855 HSERIAIAYG 864
Score = 256 bits (655), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 141/473 (29%), Positives = 257/473 (54%), Gaps = 3/473 (0%)
Query: 82 LFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLS 141
+F++M + WN +I + + G + Y M EG+ + +FP ++KAC +L
Sbjct: 101 VFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRD 160
Query: 142 FIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLR-DLVSWNCMVN 200
G ++H L+K+G ++ N+L+ MY K + A ++F+ + D V WN +++
Sbjct: 161 IRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILS 220
Query: 201 GYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLE- 259
Y G L++L F+EM G P+ +++S+L C + GKEIH V+++
Sbjct: 221 SYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHS 280
Query: 260 LDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRM 319
++ V +LI MY +CGK+ AER+ +M ++V WN++I GY N + E+ M
Sbjct: 281 SELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDM 340
Query: 320 QEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQL 379
D ++M +++ + + LL G +H Y I+ + +L + L+DMY KC
Sbjct: 341 IAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLT 400
Query: 380 KFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAY 439
+ F R+++K+++SW +IA Y QN + EALELF + + ++ D + + SIL A
Sbjct: 401 CYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRAS 460
Query: 440 AELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWN 499
+ L ++ K+IH +I + L +T N +V +Y KC ++ A R F+S+ K++VSW
Sbjct: 461 SVLKSMLIVKEIHCHILRKGL-LDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWT 519
Query: 500 TMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWEL 552
+MI + A++G + +++LF RM + G+ + + +LS+ + +N+G E+
Sbjct: 520 SMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREI 572
Score = 214 bits (544), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 120/378 (31%), Positives = 206/378 (54%), Gaps = 1/378 (0%)
Query: 70 FVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTF 129
+ G M A + +MN D WN +I+G+ +++E ++F+ M G D +
Sbjct: 293 YTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSM 352
Query: 130 PFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPL 189
+I A GRL + + G ++H +IK G D ++ V N+LIDMY K + F M
Sbjct: 353 TSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHD 412
Query: 190 RDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEI 249
+DL+SW ++ GY +++L F+++ + D + + S L S+ + KEI
Sbjct: 413 KDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEI 472
Query: 250 HCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHF 309
HC ++R GL LD ++Q L+D+Y KC + YA RVF + K++V+W +MI A+NG+
Sbjct: 473 HCHILRKGL-LDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNE 531
Query: 310 LESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETAL 369
E+ +RM E L D++ ++ +L + + L +G+ IH Y +RK F + A+
Sbjct: 532 SEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAV 591
Query: 370 VDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDA 429
VDMY CG L+ A+ VF RI K ++ + ++I AY +G + A+ELF +R++ + PD
Sbjct: 592 VDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDH 651
Query: 430 VTIASILPAYAELATVSE 447
++ ++L A + + E
Sbjct: 652 ISFLALLYACSHAGLLDE 669
Score = 176 bits (445), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 121/435 (27%), Positives = 213/435 (48%), Gaps = 5/435 (1%)
Query: 181 EKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIG 240
EKVF+ MP R +WN M+ Y G+ +L + M G S + L C+
Sbjct: 99 EKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKL 158
Query: 241 CCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCK-NIVAWNAM 299
+R G E+H +++ G + +L+ MYAK + A R+F+ K + V WN++
Sbjct: 159 RDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSI 218
Query: 300 IGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIR-KM 358
+ Y+ +G LE+ + M P++ T+++ L +C F GK IH ++
Sbjct: 219 LSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSST 278
Query: 359 FLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFH 418
L + AL+ MY +CG++ AE + ++N ++V+WN++I YVQN +EALE F
Sbjct: 279 HSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFS 338
Query: 419 CLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCG 478
+ K D V++ SI+ A L+ + ++HAY+ K SN N ++ MY+KC
Sbjct: 339 DMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCN 398
Query: 479 DLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLS 538
R F M K+L+SW T+I YA + +++LF + + +E +E S+L
Sbjct: 399 LTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILR 458
Query: 539 SCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTA 598
+ S+ + E+ + +D I++ +VD+ G+ N+ A + E +
Sbjct: 459 ASSVLKSMLIVKEIHCHILRKGLLDTVIQNE--LVDVYGKCRNMGYATRVFESIKGKDVV 516
Query: 599 RIWGSLLTASRNNND 613
W S++++S N +
Sbjct: 517 S-WTSMISSSALNGN 530
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 115/241 (47%), Gaps = 8/241 (3%)
Query: 376 CGQLKFA--ECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIA 433
CG+ + E VF + ++ +WN +I AYV NG AL L+ +R + + +
Sbjct: 90 CGKRRAVSQEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFP 149
Query: 434 SILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFK 493
++L A A+L + ++H+ + KL S F NA+V MYAK DL ARR FD K
Sbjct: 150 ALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEK 209
Query: 494 -NLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWEL 552
+ V WN+++ +Y+ G +++LF M G PN T VS L++C G E+
Sbjct: 210 GDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEI 269
Query: 553 FNSMKMDYNIDYGIEHYGC--MVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTASRN 610
S+ + E Y C ++ + R G + A++ + +M W SL+
Sbjct: 270 HASVLKSST--HSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVV-TWNSLIKGYVQ 326
Query: 611 N 611
N
Sbjct: 327 N 327
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD
Length = 705
Score = 381 bits (978), Expect = e-105, Method: Compositional matrix adjust.
Identities = 217/661 (32%), Positives = 363/661 (54%), Gaps = 48/661 (7%)
Query: 158 DRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKE 217
DR+I N L+ Y K G ++ A KVF+ MP R++VSW +V GY G + F +
Sbjct: 76 DRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWK 135
Query: 218 MLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGK 277
M + +++S L IG G + C++ + D + +TS+I K G+
Sbjct: 136 M----PEKNKVSWTVML----IGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGR 187
Query: 278 VDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPS 337
VD A +F+EM+ ++++ W M+ GY N N + DA + +++P
Sbjct: 188 VDEAREIFDEMSERSVITWTTMVTGYGQN----------------NRVDDARKIFDVMPE 231
Query: 338 CSK--FGTLLEGKCIHGYA------IRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRI 389
++ + ++L G +G M + ++ A++ G+ G++ A VF +
Sbjct: 232 KTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSM 291
Query: 390 NEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECK 449
E+N SW +I + +NG EAL+LF ++ Q ++P T+ SIL A LA++ K
Sbjct: 292 KERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGK 351
Query: 450 QIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHG 509
Q+HA + + + + + ++ ++ MY KCG+L ++ FD K+++ WN++I YA HG
Sbjct: 352 QVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHG 411
Query: 510 FGTISIQLFSRMKQNG-IEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEH 568
G ++++F M +G +PNE TFV+ LS+CS +G+V EG +++ SM+ + + H
Sbjct: 412 LGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAH 471
Query: 569 YGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTASRNNNDIFFAEFAAKHILSHD 628
Y CMVD+LGR G + A + I+ M + P A +WGSLL A R ++ + AEF AK ++ +
Sbjct: 472 YACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIE 531
Query: 629 NDNTGCYVLLANMYAEAGRWEDVEQIKLVMKKKGLAKTVDCCTVESKGKSQKF----INN 684
+N+G Y+LL+NMYA GRW DV +++ +MK + + K+ C E + K F IN+
Sbjct: 532 PENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGINS 591
Query: 685 NKSHQQAYMIYDVLDIILKKIGED----VYIHSLSKFRPADVIKKKMKSPQNHSVKLAIC 740
+ + I D LD +L++ G + +H + + ++K+ S + HS +LA+
Sbjct: 592 HPEQESILKILDELDGLLREAGYNPDCSYALHDVDE-------EEKVNSLKYHSERLAVA 644
Query: 741 FGLISTAIGKPIIIRKNTRICKDCHIAAKKISRVTKREIIVGDSKIFHHFEDGRCSCGDY 800
+ L+ + G PI + KN R+C DCH A K IS+V +REII+ D+ FHHF +G CSC DY
Sbjct: 645 YALLKLSEGIPIRVMKNLRVCSDCHTAIKIISKVKEREIILRDANRFHHFRNGECSCKDY 704
Query: 801 W 801
W
Sbjct: 705 W 705
Score = 143 bits (360), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 125/512 (24%), Positives = 225/512 (43%), Gaps = 50/512 (9%)
Query: 43 TKKQMSETPKRGMIKPNSLSLTRSLCEFVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFS 102
+K E P R +I N L + ++ +G +D A +F+ M + + W +++G+
Sbjct: 67 ARKLFDEMPDRNIISWNGL-----VSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYV 121
Query: 103 NKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHG--KLIKIGLDRD 160
+ G + +M + + L+ F++ ++ KL ++ D+D
Sbjct: 122 HNGKVDVAESLFWKMPEKN----------KVSWTVMLIGFLQDGRIDDACKLYEMIPDKD 171
Query: 161 IYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGY---RVIGDGLKSLMCFKE 217
S+I K G V+ A ++F+ M R +++W MV GY + D K E
Sbjct: 172 NIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPE 231
Query: 218 MLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLEL-------DIMVQTSLID 270
+S S L G V+ G+ I + EL ++ ++I
Sbjct: 232 -------KTEVSWTSMLMG-----YVQNGR------IEDAEELFEVMPVKPVIACNAMIS 273
Query: 271 MYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAIT 330
+ G++ A RVF+ M +N +W +I + NG LE+ MQ+ + P T
Sbjct: 274 GLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPT 333
Query: 331 MINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRIN 390
+I++L C+ +L GK +H +R F + + + L+ MY KCG+L ++ +F R
Sbjct: 334 LISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFP 393
Query: 391 EKNMVSWNAIIAAYVQNGRNEEALELF-HCLRNQTLKPDAVTIASILPAYAELATVSECK 449
K+++ WN+II+ Y +G EEAL++F + + KP+ VT + L A + V E
Sbjct: 394 SKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGL 453
Query: 450 QIHAYITKL-ELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFK-NLVSWNTMIMAYAI 507
+I+ + + + T +V M + G A DSM+ + + W +++ A
Sbjct: 454 KIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRT 513
Query: 508 HGFGTISIQLFSRMKQNGIEPNESTFVSLLSS 539
H + + F K IEP S LLS+
Sbjct: 514 H--SQLDVAEFCAKKLIEIEPENSGTYILLSN 543
Score = 105 bits (263), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 75/338 (22%), Positives = 159/338 (47%), Gaps = 36/338 (10%)
Query: 281 AERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIP-------------- 326
A ++F+EM +NI++WN ++ GY NG E+ M E N++
Sbjct: 67 ARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKV 126
Query: 327 -DAITMINLLPSCSK-------FGTLLEGKCIHGYAIRKMFLPHL--VLETALVDMYGKC 376
A ++ +P +K G L +G+ + +M +P + T+++ K
Sbjct: 127 DVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEM-IPDKDNIARTSMIHGLCKE 185
Query: 377 GQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASIL 436
G++ A +F ++E+++++W ++ Y QN R ++A ++F + +T V+ S+L
Sbjct: 186 GRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKT----EVSWTSML 241
Query: 437 PAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLV 496
Y + + + +++ + NA++ + G++ ARR FDSM +N
Sbjct: 242 MGYVQNGRIEDAEELFEVMP----VKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDA 297
Query: 497 SWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSM 556
SW T+I + +GF ++ LF M++ G+ P T +S+LS C+ ++ G ++ +
Sbjct: 298 SWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQL 357
Query: 557 -KMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMP 593
+ +++D + ++ + + G L +K + P
Sbjct: 358 VRCQFDVDVYVA--SVLMTMYIKCGELVKSKLIFDRFP 393
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 144/295 (48%), Gaps = 32/295 (10%)
Query: 269 IDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDA 328
I ++ GK+ A ++F+ K+I +WN+M+ GY N ++ M + N+
Sbjct: 24 ITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNI---- 79
Query: 329 ITMINLLPSCSKFGTLLEGKCIHGYAIRKMF--LP--HLVLETALVDMYGKCGQLKFAEC 384
I+ L+ K G + E RK+F +P ++V TALV Y G++ AE
Sbjct: 80 ISWNGLVSGYMKNGEIDEA--------RKVFDLMPERNVVSWTALVKGYVHNGKVDVAES 131
Query: 385 VFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELAT 444
+F ++ EKN VSW ++ ++Q+GR ++A +L+ + ++ D + S++ +
Sbjct: 132 LFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDK----DNIARTSMIHGLCKEGR 187
Query: 445 VSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMA 504
V E ++I ++ E S T+T+ +V Y + + AR+ FD M K VSW +M+M
Sbjct: 188 VDEAREIFDEMS--ERSVITWTT--MVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMG 243
Query: 505 YAIHGFGTISIQLFSRMKQNGIEPNESTFV--SLLSSCSISGLVNEGWELFNSMK 557
Y +G + +LF M P + +++S G + + +F+SMK
Sbjct: 244 YVQNGRIEDAEELFEVM------PVKPVIACNAMISGLGQKGEIAKARRVFDSMK 292
>AT4G39530.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:18374736-18377240 REVERSE
Length = 834
Score = 380 bits (975), Expect = e-105, Method: Compositional matrix adjust.
Identities = 215/640 (33%), Positives = 353/640 (55%), Gaps = 6/640 (0%)
Query: 70 FVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTF 129
++ G +D A +F+ + + T W +I G G + ++++ + + D +
Sbjct: 193 YLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYIL 252
Query: 130 PFVIKACGRLLSFIEG-KKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMP 188
V+ AC +L F+EG K++H +++ GL+ D + N LID Y K G V A K+F MP
Sbjct: 253 STVLSACS-ILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMP 311
Query: 189 LRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKE 248
++++SW +++GY+ +++ F M G KPD + S L C+ + G +
Sbjct: 312 NKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQ 371
Query: 249 IHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAING- 307
+H I+ L D V SLIDMYAKC + A +VF+ ++V +NAMI GY+ G
Sbjct: 372 VHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGT 431
Query: 308 --HFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVL 365
E+ + M+ + P +T ++LL + + +L K IHG + +
Sbjct: 432 QWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFA 491
Query: 366 ETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTL 425
+AL+D+Y C LK + VF + K++V WN++ A YVQ NEEAL LF L+
Sbjct: 492 GSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRE 551
Query: 426 KPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARR 485
+PD T A+++ A LA+V ++ H + K L N + +NA++ MYAKCG + A +
Sbjct: 552 RPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHK 611
Query: 486 YFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGL 545
FDS + +++V WN++I +YA HG G ++Q+ +M GIEPN TFV +LS+CS +GL
Sbjct: 612 AFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGL 671
Query: 546 VNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLL 605
V +G + F M + + I+ EHY CMV LLGR G L+ A++ IE+MP P A +W SLL
Sbjct: 672 VEDGLKQFELM-LRFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLL 730
Query: 606 TASRNNNDIFFAEFAAKHILSHDNDNTGCYVLLANMYAEAGRWEDVEQIKLVMKKKGLAK 665
+ ++ AE AA+ + D ++G + +L+N+YA G W + ++++ MK +G+ K
Sbjct: 731 SGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVK 790
Query: 666 TVDCCTVESKGKSQKFINNNKSHQQAYMIYDVLDIILKKI 705
+ + F++ +KSH +A IY+VLD +L +I
Sbjct: 791 EPGRSWIGINKEVHIFLSKDKSHCKANQIYEVLDDLLVQI 830
Score = 250 bits (638), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 161/552 (29%), Positives = 273/552 (49%), Gaps = 18/552 (3%)
Query: 73 SGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQE-VIDFYHRMEYEGIGIDNFTFPF 131
+G M A +FEKM + + W+ ++ ++ G+++E ++ F + +
Sbjct: 92 AGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSS 151
Query: 132 VIKAC------GRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFE 185
I+AC GR + F ++ L+K G DRD+YV LID Y K G ++ A VF+
Sbjct: 152 FIQACSGLDGRGRWMVF----QLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFD 207
Query: 186 AMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRG 245
A+P + V+W M++G +G SL F +++ PD + + L CSI + G
Sbjct: 208 ALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEG 267
Query: 246 GKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAI 305
GK+IH ++R GLE+D + LID Y KCG+V A ++FN M KNI++W ++ GY
Sbjct: 268 GKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQ 327
Query: 306 NGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVL 365
N E+ M + L PD ++L SC+ L G +H Y I+ +
Sbjct: 328 NALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYV 387
Query: 366 ETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRN---EEALELFHCLRN 422
+L+DMY KC L A VF ++V +NA+I Y + G EAL +F +R
Sbjct: 388 TNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRF 447
Query: 423 QTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQT 482
+ ++P +T S+L A A L ++ KQIH + K L+ + F +A++ +Y+ C L+
Sbjct: 448 RLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKD 507
Query: 483 ARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSI 542
+R FD M K+LV WN+M Y ++ LF ++ + P+E TF +++++
Sbjct: 508 SRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGN 567
Query: 543 SGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNL-DAAKQFIEEMPLVPTARIW 601
V G E F+ + ++ ++D+ + G+ DA K F + W
Sbjct: 568 LASVQLGQE-FHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAF--DSAASRDVVCW 624
Query: 602 GSLLTASRNNND 613
S++++ N+ +
Sbjct: 625 NSVISSYANHGE 636
Score = 228 bits (581), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 153/470 (32%), Positives = 243/470 (51%), Gaps = 16/470 (3%)
Query: 148 VHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGD 207
VHG++I GL+ D Y+ N LI++Y + G + A KVFE MP R+LVSW+ MV+ G
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125
Query: 208 GLKSLMCFKEMLGL-GEKPDRLSMISSLGGCSIGCCVRGGK---EIHCQVIRNGLELDIM 263
+SL+ F E + P+ + S + CS G RG ++ ++++G + D+
Sbjct: 126 YEESLVVFLEFWRTRKDSPNEYILSSFIQACS-GLDGRGRWMVFQLQSFLVKSGFDRDVY 184
Query: 264 VQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDN 323
V T LID Y K G +DYA VF+ + K+ V W MI G G S ++ EDN
Sbjct: 185 VGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDN 244
Query: 324 LIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAE 383
++PD + +L +CS L GK IH + +R L L+D Y KCG++ A
Sbjct: 245 VVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAH 304
Query: 384 CVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELA 443
+F + KN++SW +++ Y QN ++EA+ELF + LKPD +SIL + A L
Sbjct: 305 KLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLH 364
Query: 444 TVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIM 503
+ Q+HAY K L ++++ +N+++ MYAKC L AR+ FD + ++V +N MI
Sbjct: 365 ALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIE 424
Query: 504 AYAIHGFGTI-----SIQLFSRMKQNGIEPNESTFVSLL-SSCSISGLVNEGWELFNSMK 557
Y+ GT ++ +F M+ I P+ TFVSLL +S S++ L + + +
Sbjct: 425 GYS--RLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLS--KQIHGLM 480
Query: 558 MDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTA 607
Y ++ I ++D+ L ++ +EM V IW S+
Sbjct: 481 FKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMK-VKDLVIWNSMFAG 529
>AT3G24000.1 | Symbols: | INVOLVED IN: biological_process unknown;
EXPRESSED IN: shoot apex, carpel; EXPRESSED DURING:
petal differentiation and expansion stage; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT3G23330.1); Has 15874 Blast hits to 5333
proteins in 187 species: Archae - 1; Bacteria - 6;
Metazoa - 100; Fungi - 81; Plants - 15349; Viruses - 0;
Other Eukaryotes - 337 (source: NCBI BLink). |
chr3:8672774-8674881 FORWARD
Length = 665
Score = 377 bits (969), Expect = e-104, Method: Compositional matrix adjust.
Identities = 198/568 (34%), Positives = 324/568 (57%), Gaps = 1/568 (0%)
Query: 226 DRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVF 285
DR + L C++ + G+ +H ++++ DI++ +L++MYAKCG ++ A +VF
Sbjct: 59 DRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVF 118
Query: 286 NEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLL 345
+M ++ V W +I GY+ + ++ +M P+ T+ +++ + +
Sbjct: 119 EKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGC 178
Query: 346 EGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYV 405
G +HG+ ++ F ++ + +AL+D+Y + G + A+ VF + +N VSWNA+IA +
Sbjct: 179 CGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHA 238
Query: 406 QNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTF 465
+ E+ALELF + +P + AS+ A + + + K +HAY+ K F
Sbjct: 239 RRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAF 298
Query: 466 TSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNG 525
N ++ MYAK G + AR+ FD ++ +++VSWN+++ AYA HGFG ++ F M++ G
Sbjct: 299 AGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVG 358
Query: 526 IEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAA 585
I PNE +F+S+L++CS SGL++EGW + MK D I HY +VDLLGR G+L+ A
Sbjct: 359 IRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRA 417
Query: 586 KQFIEEMPLVPTARIWGSLLTASRNNNDIFFAEFAAKHILSHDNDNTGCYVLLANMYAEA 645
+FIEEMP+ PTA IW +LL A R + + +AA+H+ D D+ G +V+L N+YA
Sbjct: 418 LRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASG 477
Query: 646 GRWEDVEQIKLVMKKKGLAKTVDCCTVESKGKSQKFINNNKSHQQAYMIYDVLDIILKKI 705
GRW D +++ MK+ G+ K C VE + F+ N++ H Q I + +L KI
Sbjct: 478 GRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKI 537
Query: 706 GEDVYIHSLSKFRPADVIKKKMKSPQNHSVKLAICFGLISTAIGKPIIIRKNTRICKDCH 765
E Y+ S +++ + Q HS K+A+ F L++T G I I+KN R+C DCH
Sbjct: 538 KELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCH 597
Query: 766 IAAKKISRVTKREIIVGDSKIFHHFEDG 793
A K S+V REIIV D+ FHHF+D
Sbjct: 598 TAIKLASKVVGREIIVRDTNRFHHFKDA 625
Score = 201 bits (511), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 111/396 (28%), Positives = 203/396 (51%), Gaps = 7/396 (1%)
Query: 117 MEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGF 176
+E I D + ++K C I+G+ VH +++ DI + N+L++MY K G
Sbjct: 51 LEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGS 110
Query: 177 VEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGG 236
+E A KVFE MP RD V+W +++GY +L+ F +ML G P+ ++ S +
Sbjct: 111 LEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKA 170
Query: 237 CSI---GCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNI 293
+ GCC G ++H ++ G + ++ V ++L+D+Y + G +D A+ VF+ + +N
Sbjct: 171 AAAERRGCC---GHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRND 227
Query: 294 VAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGY 353
V+WNA+I G+A ++ + M D P + +L +CS G L +GK +H Y
Sbjct: 228 VSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAY 287
Query: 354 AIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEA 413
I+ L+DMY K G + A +F R+ ++++VSWN+++ AY Q+G +EA
Sbjct: 288 MIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEA 347
Query: 414 LELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYM 473
+ F +R ++P+ ++ S+L A + + E + + K + + +V +
Sbjct: 348 VWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDL 407
Query: 474 YAKCGDLQTARRYFDSMSFKNLVS-WNTMIMAYAIH 508
+ GDL A R+ + M + + W ++ A +H
Sbjct: 408 LGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMH 443
Score = 173 bits (438), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 97/335 (28%), Positives = 174/335 (51%), Gaps = 1/335 (0%)
Query: 70 FVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTF 129
+ G+++ A +FEKM Q D W +I G+S + + F+++M G + FT
Sbjct: 105 YAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTL 164
Query: 130 PFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPL 189
VIKA G ++HG +K G D +++V ++L+D+Y ++G ++ A+ VF+A+
Sbjct: 165 SSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALES 224
Query: 190 RDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEI 249
R+ VSWN ++ G+ K+L F+ ML G +P S S G CS + GK +
Sbjct: 225 RNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWV 284
Query: 250 HCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHF 309
H +I++G +L +L+DMYAK G + A ++F+ + +++V+WN+++ YA +G
Sbjct: 285 HAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFG 344
Query: 310 LESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETAL 369
E+ + M+ + P+ I+ +++L +CS G L EG + + +P +
Sbjct: 345 KEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTV 404
Query: 370 VDMYGKCGQLKFAECVFGRIN-EKNMVSWNAIIAA 403
VD+ G+ G L A + E W A++ A
Sbjct: 405 VDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNA 439
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/136 (21%), Positives = 66/136 (48%), Gaps = 1/136 (0%)
Query: 70 FVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTF 129
+ SG++ +A +F+++ + D WN ++ ++ G +E + ++ M GI + +F
Sbjct: 307 YAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISF 366
Query: 130 PFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPL 189
V+ AC EG + + K G+ + + +++D+ + G + A + E MP+
Sbjct: 367 LSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPI 426
Query: 190 RDLVS-WNCMVNGYRV 204
+ W ++N R+
Sbjct: 427 EPTAAIWKALLNACRM 442
>AT5G66520.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:26551879-26553741 FORWARD
Length = 620
Score = 377 bits (968), Expect = e-104, Method: Compositional matrix adjust.
Identities = 210/591 (35%), Positives = 327/591 (55%), Gaps = 37/591 (6%)
Query: 247 KEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVD---YAERVFNEMTCKNIVAWNAMIGGY 303
K+IH ++++ GL D T + D YA+ VF+ + WN MI G+
Sbjct: 31 KQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIRGF 90
Query: 304 AINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHG----------- 352
+ + S +RM + +A T +LL +CS E IH
Sbjct: 91 SCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDV 150
Query: 353 ---------YAIRKMF-LPHLVLE----------TALVDMYGKCGQLKFAECVFGRINEK 392
YA+ F L HL+ + +++ Y K G++ A +F ++ EK
Sbjct: 151 YAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEK 210
Query: 393 NMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIH 452
N +SW +I+ YVQ N+EAL+LFH ++N ++PD V++A+ L A A+L + + K IH
Sbjct: 211 NAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIH 270
Query: 453 AYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGT 512
+Y+ K + ++ ++ MYAKCG+++ A F ++ K++ +W +I YA HG G
Sbjct: 271 SYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGR 330
Query: 513 ISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCM 572
+I F M++ GI+PN TF ++L++CS +GLV EG +F SM+ DYN+ IEHYGC+
Sbjct: 331 EAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCI 390
Query: 573 VDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTASRNNNDIFFAEFAAKHILSHDNDNT 632
VDLLGR G LD AK+FI+EMPL P A IWG+LL A R + +I E + +++ D +
Sbjct: 391 VDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIAIDPYHG 450
Query: 633 GCYVLLANMYAEAGRWEDVEQIKLVMKKKGLAKTVDCCTVESKGKSQKFINNNKSHQQAY 692
G YV AN++A +W+ + + +MK++G+AK C T+ +G + +F+ ++SH +
Sbjct: 451 GRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFLAGDRSHPEIE 510
Query: 693 MIYDVLDIILKKIGEDVYIHSLSKFRPADVIKKKMKSP--QNHSVKLAICFGLISTAIGK 750
I I+ +K+ E+ Y+ L + D++ + HS KLAI +GLI T G
Sbjct: 511 KIQSKWRIMRRKLEENGYVPELEEML-LDLVDDDEREAIVHQHSEKLAITYGLIKTKPGT 569
Query: 751 PIIIRKNTRICKDCHIAAKKISRVTKREIIVGDSKIFHHFEDGRCSCGDYW 801
I I KN R+CKDCH K IS++ KR+I++ D FHHF DG+CSCGDYW
Sbjct: 570 IIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFRDGKCSCGDYW 620
Score = 185 bits (470), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 121/404 (29%), Positives = 201/404 (49%), Gaps = 37/404 (9%)
Query: 36 RIRKSNPTKKQMSETPKRGMIKPNSLSLTRSLCEFVDSGAMDNALY---LFEKMNQPDTY 92
R K K+ + K G+++ +S ++T+ L + S + D Y +F+ ++PDT+
Sbjct: 23 RCSKQEELKQIHARMLKTGLMQ-DSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTF 81
Query: 93 IWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKL 152
+WN++IRGFS + + Y RM + +TFP ++KAC L +F E ++H ++
Sbjct: 82 LWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQI 141
Query: 153 IKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGD----- 207
K+G + D+Y NSLI+ Y G ++A +F+ +P D VSWN ++ GY G
Sbjct: 142 TKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIAL 201
Query: 208 --------------------------GLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGC 241
++L F EM +PD +S+ ++L C+
Sbjct: 202 TLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLG 261
Query: 242 CVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIG 301
+ GK IH + + + +D ++ LIDMYAKCG+++ A VF + K++ AW A+I
Sbjct: 262 ALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALIS 321
Query: 302 GYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFL- 360
GYA +GH E+ + MQ+ + P+ IT +L +CS G + EGK I R L
Sbjct: 322 GYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLK 381
Query: 361 PHLVLETALVDMYGKCGQLKFAECVFGRINEK-NMVSWNAIIAA 403
P + +VD+ G+ G L A+ + K N V W A++ A
Sbjct: 382 PTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKA 425
>AT2G40720.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:16987269-16989851 FORWARD
Length = 860
Score = 375 bits (964), Expect = e-104, Method: Compositional matrix adjust.
Identities = 206/627 (32%), Positives = 347/627 (55%), Gaps = 2/627 (0%)
Query: 75 AMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIK 134
++D E ++ + +WNV+I GF G+ + +D Y + + + + +F +
Sbjct: 221 SIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALG 280
Query: 135 ACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVS 194
AC + + G+++H ++K+GL D YVC SL+ MY K G V AE VF + + L
Sbjct: 281 ACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEI 340
Query: 195 WNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVI 254
WN MV Y G +L F M PD ++ + + CS+ GK +H ++
Sbjct: 341 WNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELF 400
Query: 255 RNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFT 314
+ ++ ++++L+ +Y+KCG A VF M K++VAW ++I G NG F E+
Sbjct: 401 KRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALK 460
Query: 315 CLKRMQEDN--LIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDM 372
M++D+ L PD+ M ++ +C+ L G +HG I+ + ++ + ++L+D+
Sbjct: 461 VFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDL 520
Query: 373 YGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTI 432
Y KCG + A VF ++ +NMV+WN++I+ Y +N E +++LF+ + +Q + PD+V+I
Sbjct: 521 YSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSI 580
Query: 433 ASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSF 492
S+L A + A++ + K +H Y +L + S+T NA++ MY KCG + A F M
Sbjct: 581 TSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQH 640
Query: 493 KNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWEL 552
K+L++WN MI Y HG ++ LF MK+ G P++ TF+SL+S+C+ SG V EG +
Sbjct: 641 KSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNI 700
Query: 553 FNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTASRNNN 612
F MK DY I+ +EHY MVDLLGR G L+ A FI+ MP+ + IW LL+ASR ++
Sbjct: 701 FEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHH 760
Query: 613 DIFFAEFAAKHILSHDNDNTGCYVLLANMYAEAGRWEDVEQIKLVMKKKGLAKTVDCCTV 672
++ +A+ +L + + YV L N+Y EAG + ++ +MK+KGL K C +
Sbjct: 761 NVELGILSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGCSWI 820
Query: 673 ESKGKSQKFINNNKSHQQAYMIYDVLD 699
E ++ F + S I++VL+
Sbjct: 821 EVSDRTNVFFSGGSSSPMKAEIFNVLN 847
Score = 260 bits (665), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 161/495 (32%), Positives = 265/495 (53%), Gaps = 12/495 (2%)
Query: 70 FVDSGAMDNALYLFEKMNQP-------DTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGI 122
+V G +D A+ +F+ +Q D +WN +I G+ F+E + + RM G+
Sbjct: 105 YVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGV 164
Query: 123 GIDNFTFPFVIKACGRLLSFI--EGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVA 180
D F+ V+ + +F EGK++HG +++ LD D ++ +LIDMYFKFG A
Sbjct: 165 RPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDA 224
Query: 181 EKVF-EAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSI 239
+VF E ++V WN M+ G+ G SL + K S +LG CS
Sbjct: 225 WRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQ 284
Query: 240 GCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAM 299
G++IHC V++ GL D V TSL+ MY+KCG V AE VF+ + K + WNAM
Sbjct: 285 SENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAM 344
Query: 300 IGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMF 359
+ YA N + + M++ +++PD+ T+ N++ CS G GK +H ++
Sbjct: 345 VAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPI 404
Query: 360 LPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHC 419
+E+AL+ +Y KCG A VF + EK+MV+W ++I+ +NG+ +EAL++F
Sbjct: 405 QSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGD 464
Query: 420 LR--NQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKC 477
++ + +LKPD+ + S+ A A L + Q+H + K L N F ++++ +Y+KC
Sbjct: 465 MKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKC 524
Query: 478 GDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLL 537
G + A + F SMS +N+V+WN+MI Y+ + +SI LF+ M GI P+ + S+L
Sbjct: 525 GLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVL 584
Query: 538 SSCSISGLVNEGWEL 552
+ S + + +G L
Sbjct: 585 VAISSTASLLKGKSL 599
Score = 220 bits (560), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 159/544 (29%), Positives = 276/544 (50%), Gaps = 28/544 (5%)
Query: 90 DTYI----WNVIIRGFSNKGLFQEVIDFYHRMEYEG-IGIDNFTFPFVIKACGRLLSFIE 144
D+YI N IR KG + + + Y + + FTFP ++KAC L +
Sbjct: 19 DSYISPASINSGIRALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSY 78
Query: 145 GKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFE-------AMPLRDLVSWNC 197
GK +HG ++ +G D ++ SL++MY K GF++ A +VF+ + RD+ WN
Sbjct: 79 GKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNS 138
Query: 198 MVNGYRVIGDGLKSLMCFKEMLGLGEKPD--RLSMISSLGGCSIGCCVR-GGKEIHCQVI 254
M++GY + + CF+ ML G +PD LS++ S+ C G R GK+IH ++
Sbjct: 139 MIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSV-MCKEGNFRREEGKQIHGFML 197
Query: 255 RNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCK-NIVAWNAMIGGYAINGHFLESF 313
RN L+ D ++T+LIDMY K G A RVF E+ K N+V WN MI G+ +G S
Sbjct: 198 RNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSL 257
Query: 314 TCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMY 373
+ +++ + + L +CS+ G+ IH ++ + T+L+ MY
Sbjct: 258 DLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMY 317
Query: 374 GKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIA 433
KCG + AE VF + +K + WNA++AAY +N AL+LF +R +++ PD+ T++
Sbjct: 318 SKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLS 377
Query: 434 SILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFK 493
+++ + L + K +HA + K + S + +A++ +Y+KCG A F SM K
Sbjct: 378 NVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEK 437
Query: 494 NLVSWNTMIMAYAIHGFGTISIQLFSRMK--QNGIEPNESTFVSLLSSCSISGLVNEGWE 551
++V+W ++I +G ++++F MK + ++P+ S+ ++C+ + G +
Sbjct: 438 DMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQ 497
Query: 552 LFNSM---KMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTA- 607
+ SM + N+ G ++DL + G + A + M W S+++
Sbjct: 498 VHGSMIKTGLVLNVFVG----SSLIDLYSKCGLPEMALKVFTSMS-TENMVAWNSMISCY 552
Query: 608 SRNN 611
SRNN
Sbjct: 553 SRNN 556
>AT3G08820.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:2677122-2679179 REVERSE
Length = 685
Score = 374 bits (960), Expect = e-103, Method: Compositional matrix adjust.
Identities = 214/662 (32%), Positives = 357/662 (53%), Gaps = 12/662 (1%)
Query: 146 KKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVI 205
K++H LI L D ++ N L+ F + + +F ++ +N ++NG+ +
Sbjct: 30 KQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGF--V 87
Query: 206 GDGL--KSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIM 263
+ L ++L F + G + L C+ + G ++H V++ G D+
Sbjct: 88 NNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVA 147
Query: 264 VQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDN 323
TSL+ +Y+ G+++ A ++F+E+ +++V W A+ GY +G E+ K+M E
Sbjct: 148 AMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMG 207
Query: 324 LIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAE 383
+ PD+ ++ +L +C G L G+ I Y + + T LV++Y KCG+++ A
Sbjct: 208 VKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKAR 267
Query: 384 CVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELA 443
VF + EK++V+W+ +I Y N +E +ELF + + LKPD +I L + A L
Sbjct: 268 SVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLG 327
Query: 444 TVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIM 503
+ + + I + E +N F +NA++ MYAKCG + F M K++V N I
Sbjct: 328 ALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAIS 387
Query: 504 AYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNID 563
A +G +S +F + ++ GI P+ STF+ LL C +GL+ +G FN++ Y +
Sbjct: 388 GLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALK 447
Query: 564 YGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTASRNNNDIFFAEFAAKH 623
+EHYGCMVDL GR G LD A + I +MP+ P A +WG+LL+ R D AE K
Sbjct: 448 RTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKE 507
Query: 624 ILSHDNDNTGCYVLLANMYAEAGRWEDVEQIKLVMKKKGLAKTVDCCTVESKGKSQKFIN 683
+++ + N G YV L+N+Y+ GRW++ +++ +M KKG+ K +E +GK +F+
Sbjct: 508 LIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVHEFLA 567
Query: 684 NNKSHQQAYMIYDVLDIILKKIGEDVYIHSL---SKFRPADV-IKKKMKSPQNHSVKLAI 739
++KSH + IY L+ +G ++ + ++F DV ++K + HS KLA+
Sbjct: 568 DDKSHPLSDKIYAKLE----DLGNEMRLMGFVPTTEFVFFDVEEEEKERVLGYHSEKLAV 623
Query: 740 CFGLISTAIGKPIIIRKNTRICKDCHIAAKKISRVTKREIIVGDSKIFHHFEDGRCSCGD 799
GLIST G+ I + KN R+C DCH K IS++T+REI+V D+ FH F +G CSC D
Sbjct: 624 ALGLISTDHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVRDNNRFHCFTNGSCSCND 683
Query: 800 YW 801
YW
Sbjct: 684 YW 685
Score = 213 bits (542), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 135/478 (28%), Positives = 232/478 (48%), Gaps = 5/478 (1%)
Query: 82 LFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLS 141
LF P+ +++N +I GF N LF E +D + + G+ + FTFP V+KAC R S
Sbjct: 67 LFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASS 126
Query: 142 FIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNG 201
G +H ++K G + D+ SL+ +Y G + A K+F+ +P R +V+W + +G
Sbjct: 127 RKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSG 186
Query: 202 YRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELD 261
Y G +++ FK+M+ +G KPD ++ L C + G+ I + ++ +
Sbjct: 187 YTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKN 246
Query: 262 IMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQE 321
V+T+L+++YAKCGK++ A VF+ M K+IV W+ MI GYA N E +M +
Sbjct: 247 SFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQ 306
Query: 322 DNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKF 381
+NL PD +++ L SC+ G L G+ R FL +L + AL+DMY KCG +
Sbjct: 307 ENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMAR 366
Query: 382 AECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAE 441
VF + EK++V NA I+ +NG + + +F + PD T +L
Sbjct: 367 GFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVH 426
Query: 442 LATVSECKQIHAYITKLELSSNTFTS-NAIVYMYAKCGDLQTARRYFDSMSFK-NLVSWN 499
+ + + I+ + T +V ++ + G L A R M + N + W
Sbjct: 427 AGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWG 486
Query: 500 TMIMAYAIHGFGTISIQLFSRMKQNGIEP-NESTFVSLLSSCSISGLVNEGWELFNSM 556
++ + ++ + + +EP N +V L + S+ G +E E+ + M
Sbjct: 487 ALLSGCRLVKDTQLAETVLKELI--ALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMM 542
Score = 166 bits (420), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 90/312 (28%), Positives = 164/312 (52%)
Query: 238 SIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWN 297
S+ C V K+IH +I + L D + L+ + Y+ +F+ NI +N
Sbjct: 21 SVACTVNHLKQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYN 80
Query: 298 AMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRK 357
++I G+ N F E+ +++ L T +L +C++ + G +H ++
Sbjct: 81 SLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKC 140
Query: 358 MFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELF 417
F + T+L+ +Y G+L A +F I ++++V+W A+ + Y +GR+ EA++LF
Sbjct: 141 GFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLF 200
Query: 418 HCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKC 477
+ +KPD+ I +L A + + + I Y+ ++E+ N+F +V +YAKC
Sbjct: 201 KKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKC 260
Query: 478 GDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLL 537
G ++ AR FDSM K++V+W+TMI YA + F I+LF +M Q ++P++ + V L
Sbjct: 261 GKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFL 320
Query: 538 SSCSISGLVNEG 549
SSC+ G ++ G
Sbjct: 321 SSCASLGALDLG 332
Score = 142 bits (359), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 93/350 (26%), Positives = 172/350 (49%), Gaps = 14/350 (4%)
Query: 62 SLTRSLCEFVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEG 121
++T L + SG +++A LF+++ W + G++ G +E ID + +M G
Sbjct: 148 AMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMG 207
Query: 122 IGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAE 181
+ D++ V+ AC + G+ + + ++ + ++ +V +L+++Y K G +E A
Sbjct: 208 VKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKAR 267
Query: 182 KVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGC 241
VF++M +D+V+W+ M+ GY + + F +ML KPD+ S++ L C+
Sbjct: 268 SVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLG 327
Query: 242 CVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIG 301
+ G+ + R+ ++ + +LIDMYAKCG + VF EM K+IV NA I
Sbjct: 328 ALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAIS 387
Query: 302 GYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEG-------KCIHGYA 354
G A NGH SF + ++ + PD T + LL C G + +G C+ YA
Sbjct: 388 GLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCV--YA 445
Query: 355 IRKMFLPHLVLETALVDMYGKCGQLKFA-ECVFGRINEKNMVSWNAIIAA 403
+++ + +VD++G+ G L A + N + W A+++
Sbjct: 446 LKRTVEHY----GCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSG 491
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 118/260 (45%), Gaps = 24/260 (9%)
Query: 56 IKPNSLSLTRSLCEFVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYH 115
++ NS T + + G M+ A +F+ M + D W+ +I+G+++ +E I+ +
Sbjct: 243 MQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFL 302
Query: 116 RMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFG 175
+M E + D F+ + +C L + G+ + + ++++ N+LIDMY K G
Sbjct: 303 QMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCG 362
Query: 176 FVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLG 235
+ +VF+ M +D+V N ++G G S F + LG PD + + L
Sbjct: 363 AMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLC 422
Query: 236 GCSIGCCVRGGKEIHCQVIRNGLEL------------DIMVQTSLIDMYAKCGKVDYAER 283
GC +H +I++GL + ++D++ + G +D A R
Sbjct: 423 GC-----------VHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYR 471
Query: 284 VFNEMTCK-NIVAWNAMIGG 302
+ +M + N + W A++ G
Sbjct: 472 LICDMPMRPNAIVWGALLSG 491
>AT5G04780.1 | Symbols: | INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: MEF1
(MITOCHONDRIAL RNA EDITING FACTOR 1) (TAIR:AT5G52630.1);
Has 13798 Blast hits to 4918 proteins in 150 species:
Archae - 0; Bacteria - 4; Metazoa - 59; Fungi - 36;
Plants - 13447; Viruses - 0; Other Eukaryotes - 252
(source: NCBI BLink). | chr5:1384564-1386447 FORWARD
Length = 627
Score = 371 bits (953), Expect = e-103, Method: Compositional matrix adjust.
Identities = 211/565 (37%), Positives = 313/565 (55%), Gaps = 5/565 (0%)
Query: 242 CVRGG-----KEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAW 296
C R G K H ++IR LE D+ + LI+ Y+KCG V+ A +VF+ M +++V+W
Sbjct: 63 CARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSW 122
Query: 297 NAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIR 356
N MIG Y N E+ M+ + T+ ++L +C LE K +H +++
Sbjct: 123 NTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVK 182
Query: 357 KMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALEL 416
+L + TAL+D+Y KCG +K A VF + +K+ V+W++++A YVQN EEAL L
Sbjct: 183 TCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLL 242
Query: 417 FHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAK 476
+ + +L+ + T++S++ A + LA + E KQ+HA I K SN F +++ V MYAK
Sbjct: 243 YRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAK 302
Query: 477 CGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSL 536
CG L+ + F + KNL WNT+I +A H + LF +M+Q+G+ PNE TF SL
Sbjct: 303 CGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSL 362
Query: 537 LSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVP 596
LS C +GLV EG F M+ Y + + HY CMVD+LGR G L A + I+ +P P
Sbjct: 363 LSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDP 422
Query: 597 TARIWGSLLTASRNNNDIFFAEFAAKHILSHDNDNTGCYVLLANMYAEAGRWEDVEQIKL 656
TA IWGSLL + R ++ AE AA+ + + +N G +VLL+N+YA +WE++ + +
Sbjct: 423 TASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRK 482
Query: 657 VMKKKGLAKTVDCCTVESKGKSQKFINNNKSHQQAYMIYDVLDIILKKIGEDVYIHSLSK 716
+++ + K ++ K K F H + I LD ++ K + Y S+
Sbjct: 483 LLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKFRKFGYKPSVEH 542
Query: 717 FRPADVIKKKMKSPQNHSVKLAICFGLISTAIGKPIIIRKNTRICKDCHIAAKKISRVTK 776
I KK + HS KLA+ FGL+ P+ I KN RIC DCH K S T+
Sbjct: 543 ELHDVEIGKKEELLMQHSEKLALVFGLMCLPESSPVRIMKNLRICVDCHEFMKAASMATR 602
Query: 777 REIIVGDSKIFHHFEDGRCSCGDYW 801
R IIV D FHHF DG CSCGD+W
Sbjct: 603 RFIIVRDVNRFHHFSDGHCSCGDFW 627
Score = 216 bits (550), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 127/422 (30%), Positives = 222/422 (52%), Gaps = 7/422 (1%)
Query: 132 VIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRD 191
+++ C R + +E K HGK+I+I L+ D+ + N LI+ Y K GFVE+A +VF+ M R
Sbjct: 59 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 118
Query: 192 LVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHC 251
LVSWN M+ Y ++L F EM G K ++ S L C + C K++HC
Sbjct: 119 LVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHC 178
Query: 252 QVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLE 311
++ ++L++ V T+L+D+YAKCG + A +VF M K+ V W++M+ GY N ++ E
Sbjct: 179 LSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEE 238
Query: 312 SFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVD 371
+ +R Q +L + T+ +++ +CS L+EGK +H + F ++ + ++ VD
Sbjct: 239 ALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVD 298
Query: 372 MYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVT 431
MY KCG L+ + +F + EKN+ WN II+ + ++ R +E + LF ++ + P+ VT
Sbjct: 299 MYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVT 358
Query: 432 IASILPAYAELATVSECKQIHAYI-TKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSM 490
+S+L V E ++ + T LS N + +V + + G L A S+
Sbjct: 359 FSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSI 418
Query: 491 SFKNLVS-WNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEG 549
F S W +++ + + + + + + K +EP + LLS+ + N+
Sbjct: 419 PFDPTASIWGSLLASCRV--YKNLELAEVAAEKLFELEPENAGNHVLLSNIYAA---NKQ 473
Query: 550 WE 551
WE
Sbjct: 474 WE 475
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 164/310 (52%), Gaps = 1/310 (0%)
Query: 74 GAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVI 133
G ++ A +F+ M + WN +I ++ + E +D + M EG FT V+
Sbjct: 102 GFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVL 161
Query: 134 KACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLV 193
ACG +E KK+H +K +D ++YV +L+D+Y K G ++ A +VFE+M + V
Sbjct: 162 SACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSV 221
Query: 194 SWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQV 253
+W+ MV GY + ++L+ ++ + + ++ ++ S + CS + GK++H +
Sbjct: 222 TWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVI 281
Query: 254 IRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESF 313
++G ++ V +S +DMYAKCG + + +F+E+ KN+ WN +I G+A + E
Sbjct: 282 CKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVM 341
Query: 314 TCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFL-PHLVLETALVDM 372
++MQ+D + P+ +T +LL C G + EG+ L P++V + +VD+
Sbjct: 342 ILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDI 401
Query: 373 YGKCGQLKFA 382
G+ G L A
Sbjct: 402 LGRAGLLSEA 411
Score = 127 bits (318), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 121/219 (55%)
Query: 334 LLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKN 393
+L C++ G ++E K HG IR + L L++ Y KCG ++ A VF + E++
Sbjct: 59 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 118
Query: 394 MVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHA 453
+VSWN +I Y +N EAL++F +RN+ K TI+S+L A ECK++H
Sbjct: 119 LVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHC 178
Query: 454 YITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTI 513
K + N + A++ +YAKCG ++ A + F+SM K+ V+W++M+ Y +
Sbjct: 179 LSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEE 238
Query: 514 SIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWEL 552
++ L+ R ++ +E N+ T S++ +CS + EG ++
Sbjct: 239 ALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQM 277
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 107/214 (50%), Gaps = 3/214 (1%)
Query: 70 FVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTF 129
+ G + +A+ +FE M + W+ ++ G+ ++E + Y R + + + FT
Sbjct: 199 YAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTL 258
Query: 130 PFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPL 189
VI AC L + IEGK++H + K G +++V +S +DMY K G + + +F +
Sbjct: 259 SSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQE 318
Query: 190 RDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEI 249
++L WN +++G+ + ++ F++M G P+ ++ S L C V G+
Sbjct: 319 KNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRF 378
Query: 250 HCQVIRN--GLELDIMVQTSLIDMYAKCGKVDYA 281
+++R GL +++ + ++D+ + G + A
Sbjct: 379 F-KLMRTTYGLSPNVVHYSCMVDILGRAGLLSEA 411
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 90/182 (49%), Gaps = 2/182 (1%)
Query: 432 IASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMS 491
+ IL A V E K H I +++L + N ++ Y+KCG ++ AR+ FD M
Sbjct: 56 VHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGML 115
Query: 492 FKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWE 551
++LVSWNTMI Y + + ++ +F M+ G + +E T S+LS+C ++ E +
Sbjct: 116 ERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKK 175
Query: 552 LFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTASRNN 611
L + + + ID + ++DL + G + A Q E M ++ W S++ N
Sbjct: 176 L-HCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQ-DKSSVTWSSMVAGYVQN 233
Query: 612 ND 613
+
Sbjct: 234 KN 235
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/163 (20%), Positives = 78/163 (47%), Gaps = 4/163 (2%)
Query: 45 KQMSETPKRGMIKPNSLSLTRSLCEFVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNK 104
KQM + N + ++ + G++ + +F ++ + + +WN II GF+
Sbjct: 275 KQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKH 334
Query: 105 GLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKI--GLDRDIY 162
+EV+ + +M+ +G+ + TF ++ CG EG++ KL++ GL ++
Sbjct: 335 ARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFF-KLMRTTYGLSPNVV 393
Query: 163 VCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVS-WNCMVNGYRV 204
+ ++D+ + G + A ++ +++P S W ++ RV
Sbjct: 394 HYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRV 436
>AT3G09040.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:2761195-2764281 REVERSE
Length = 1028
Score = 371 bits (952), Expect = e-102, Method: Compositional matrix adjust.
Identities = 206/640 (32%), Positives = 356/640 (55%), Gaps = 4/640 (0%)
Query: 76 MDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKA 135
M+ A +FE + + + WN +IRG+++ G +V++ + M+ G ID+FTF ++
Sbjct: 378 MEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLST 437
Query: 136 CGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSW 195
C G + H +IK L ++++V N+L+DMY K G +E A ++FE M RD V+W
Sbjct: 438 CAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTW 497
Query: 196 NCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIR 255
N ++ Y + ++ FK M G D + S+L C+ + GK++HC ++
Sbjct: 498 NTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVK 557
Query: 256 NGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTC 315
GL+ D+ +SLIDMY+KCG + A +VF+ + ++V+ NA+I GY+ N + E+
Sbjct: 558 CGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQN-NLEEAVVL 616
Query: 316 LKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPH-LVLETALVDMYG 374
+ M + P IT ++ +C K +L G HG ++ F L +L+ MY
Sbjct: 617 FQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYM 676
Query: 375 KCGQLKFAECVFGRINE-KNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIA 433
+ A +F ++ K++V W +++ + QNG EEAL+ + +R+ + PD T
Sbjct: 677 NSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFV 736
Query: 434 SILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFK 493
++L + L+++ E + IH+ I L + TSN ++ MYAKCGD++ + + FD M +
Sbjct: 737 TVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRR 796
Query: 494 -NLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWEL 552
N+VSWN++I YA +G+ ++++F M+Q+ I P+E TF+ +L++CS +G V++G ++
Sbjct: 797 SNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKI 856
Query: 553 FNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTASRNNN 612
F M Y I+ ++H CMVDLLGR G L A FIE L P AR+W SLL A R +
Sbjct: 857 FEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHG 916
Query: 613 DIFFAEFAAKHILSHDNDNTGCYVLLANMYAEAGRWEDVEQIKLVMKKKGLAKTVDCCTV 672
D E +A+ ++ + N+ YVLL+N+YA G WE ++ VM+ +G+ K +
Sbjct: 917 DDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANALRKVMRDRGVKKVPGYSWI 976
Query: 673 ESKGKSQKFINNNKSHQQAYMIYDVLDIILKKIGEDVYIH 712
+ + ++ F +KSH + I L+ + + +D ++
Sbjct: 977 DVEQRTHIFAAGDKSHSEIGKIEMFLEDLYDLMKDDAVVN 1016
Score = 275 bits (702), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 186/668 (27%), Positives = 327/668 (48%), Gaps = 28/668 (4%)
Query: 19 ASFKQMGAPKRDLLVNPRIRKSNPTKKQMSETPKRGMIKPNSLSLTRSLCEFVDSGAMDN 78
+ + + G P+ +LV R+R +P+ L+ + ++ G + +
Sbjct: 234 SGYVKAGLPEEAVLVFERMRDEGH--------------RPDHLAFVTVINTYIRLGKLKD 279
Query: 79 ALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGR 138
A LF +M+ PD WNV+I G +G I+++ M + T V+ A G
Sbjct: 280 ARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGI 339
Query: 139 LLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCM 198
+ + G VH + IK+GL +IYV +SL+ MY K +E A KVFEA+ ++ V WN M
Sbjct: 340 VANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAM 399
Query: 199 VNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGL 258
+ GY G+ K + F +M G D + S L C+ + G + H +I+ L
Sbjct: 400 IRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKL 459
Query: 259 ELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKR 318
++ V +L+DMYAKCG ++ A ++F M ++ V WN +IG Y + + E+F KR
Sbjct: 460 AKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKR 519
Query: 319 MQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQ 378
M ++ D + + L +C+ L +GK +H +++ L ++L+DMY KCG
Sbjct: 520 MNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGI 579
Query: 379 LKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPA 438
+K A VF + E ++VS NA+IA Y QN EEA+ LF + + + P +T A+I+ A
Sbjct: 580 IKDARKVFSSLPEWSVVSMNALIAGYSQNNL-EEAVVLFQEMLTRGVNPSEITFATIVEA 638
Query: 439 YAELATVSECKQIHAYITKLELSSN-TFTSNAIVYMYAKCGDLQTARRYFDSMSF-KNLV 496
+ +++ Q H ITK SS + +++ MY + A F +S K++V
Sbjct: 639 CHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIV 698
Query: 497 SWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSM 556
W M+ ++ +GF +++ + M+ +G+ P+++TFV++L CS+ + EG +S+
Sbjct: 699 LWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREG-RAIHSL 757
Query: 557 KMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTASRNNNDIFF 616
D ++D+ + G++ + Q +EM W SL+ N +
Sbjct: 758 IFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNG---Y 814
Query: 617 AEFAAKHI----LSHDNDNTGCYVLLANMYAEAGRWEDVEQI-KLVMKKKGLAKTVD--C 669
AE A K SH + ++ + + AG+ D +I ++++ + G+ VD
Sbjct: 815 AEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVA 874
Query: 670 CTVESKGK 677
C V+ G+
Sbjct: 875 CMVDLLGR 882
Score = 217 bits (552), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 153/585 (26%), Positives = 275/585 (47%), Gaps = 52/585 (8%)
Query: 43 TKKQMSETPKRGMI--KPNSLSLTRSLCEFVDS-GAMDNALY-LFEKMNQ---------- 88
++K E P+R + + ++SL +DS G + NA+ L+ K Q
Sbjct: 61 SRKVFDEMPQRLALALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDF 120
Query: 89 --PDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGK 146
D WN ++ +S+ G +V+ + + I + FTF V+ C R + G+
Sbjct: 121 LEKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGR 180
Query: 147 KVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIG 206
++H +IK+GL+R+ Y +L+DMY K + A +VFE + + V W C+ +GY G
Sbjct: 181 QIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAG 240
Query: 207 DGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQT 266
++++ F+ M G +PD L+ +
Sbjct: 241 LPEEAVLVFERMRDEGHRPDHLAFV----------------------------------- 265
Query: 267 SLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIP 326
++I+ Y + GK+ A +F EM+ ++VAWN MI G+ G + M++ ++
Sbjct: 266 TVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKS 325
Query: 327 DAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVF 386
T+ ++L + L G +H AI+ ++ + ++LV MY KC +++ A VF
Sbjct: 326 TRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVF 385
Query: 387 GRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVS 446
+ EKN V WNA+I Y NG + + +ELF +++ D T S+L A +
Sbjct: 386 EALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLE 445
Query: 447 ECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYA 506
Q H+ I K +L+ N F NA+V MYAKCG L+ AR+ F+ M ++ V+WNT+I +Y
Sbjct: 446 MGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYV 505
Query: 507 IHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGI 566
+ + LF RM GI + + S L +C+ + +G ++ + + + +D +
Sbjct: 506 QDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQV-HCLSVKCGLDRDL 564
Query: 567 EHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTASRNN 611
++D+ + G + A++ +P + + S+NN
Sbjct: 565 HTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNN 609
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 159/338 (47%), Gaps = 53/338 (15%)
Query: 215 FKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAK 274
FK E P RL++ +R GK +H + + G++ + + +++D+YAK
Sbjct: 59 FKSRKVFDEMPQRLAL-----------ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAK 107
Query: 275 CGKVDYAERVFNEMTCKNIVAWNAMIGGYAI---NGHFLESFTCLKRMQEDNLIPDAITM 331
C +V YAE+ F+ + K++ AWN+M+ Y+ G L SF L E+ + P+ T
Sbjct: 108 CAQVSYAEKQFDFLE-KDVTAWNSMLSMYSSIGKPGKVLRSFVSLF---ENQIFPNKFTF 163
Query: 332 INLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINE 391
+L +C++ + G+ IH I+ + ALVDMY KC ++ A VF I +
Sbjct: 164 SIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVD 223
Query: 392 KNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQI 451
N V W + + YV+ G EEA+ +F +R++ +PD + +++ Y L
Sbjct: 224 PNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRL--------- 274
Query: 452 HAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFG 511
G L+ AR F MS ++V+WN MI + G
Sbjct: 275 --------------------------GKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCE 308
Query: 512 TISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEG 549
T++I+ F M+++ ++ ST S+LS+ I ++ G
Sbjct: 309 TVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLG 346
>AT1G25360.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:8894428-8896800 FORWARD
Length = 790
Score = 370 bits (950), Expect = e-102, Method: Compositional matrix adjust.
Identities = 230/772 (29%), Positives = 374/772 (48%), Gaps = 115/772 (14%)
Query: 138 RLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKF----------------------- 174
R S + VHG +I G ++ N LID+Y K
Sbjct: 26 RRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTT 85
Query: 175 --------GFVEVAEKVFEAMP--LRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEK 224
G + +A VFE P +RD V +N M+ G+ DG ++ F +M G K
Sbjct: 86 MVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFK 145
Query: 225 PDRLSMISSLGGCSIGC-----CVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGK-- 277
PD + S L G ++ CV + H +++G V +L+ +Y+KC
Sbjct: 146 PDNFTFASVLAGLALVADDEKQCV----QFHAAALKSGAGYITSVSNALVSVYSKCASSP 201
Query: 278 --VDYAERVFNEMTCKN--------------------------------IVAWNAMIGGY 303
+ A +VF+E+ K+ +VA+NAMI GY
Sbjct: 202 SLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGY 261
Query: 304 AINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKM-FLPH 362
G + E+ ++RM + D T +++ +C+ G L GK +H Y +R+ F H
Sbjct: 262 VNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFH 321
Query: 363 LVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYV----------------- 405
+ +LV +Y KCG+ A +F ++ K++VSWNA+++ YV
Sbjct: 322 F--DNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKE 379
Query: 406 --------------QNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQI 451
+NG EE L+LF C++ + +P + + + A L +Q
Sbjct: 380 KNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQY 439
Query: 452 HAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFG 511
HA + K+ S+ NA++ MYAKCG ++ AR+ F +M + VSWN +I A HG G
Sbjct: 440 HAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHG 499
Query: 512 TISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGC 571
++ ++ M + GI P+ T +++L++CS +GLV++G + F+SM+ Y I G +HY
Sbjct: 500 AEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYAR 559
Query: 572 MVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTASRNNNDIFFAEFAAKHILSHDNDN 631
++DLL R+G A+ IE +P PTA IW +LL+ R + ++ AA + ++
Sbjct: 560 LIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEH 619
Query: 632 TGCYVLLANMYAEAGRWEDVEQIKLVMKKKGLAKTVDCCTVESKGKSQKFINNNKSHQQA 691
G Y+LL+NM+A G+WE+V +++ +M+ +G+ K V C +E + + F+ ++ SH +A
Sbjct: 620 DGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEA 679
Query: 692 YMIYDVLDIILKKIGEDVYIHSLSKFRPADVIKKKMKSP--QNHSVKLAICFGLISTAIG 749
+Y L + K++ Y+ S F DV K HS K+A+ FGL+ G
Sbjct: 680 EAVYIYLQDLGKEMRRLGYVPDTS-FVLHDVESDGHKEDMLTTHSEKIAVAFGLMKLPPG 738
Query: 750 KPIIIRKNTRICKDCHIAAKKISRVTKREIIVGDSKIFHHFEDGRCSCGDYW 801
I I KN R C DCH + +S V +R+II+ D K FHHF +G CSCG++W
Sbjct: 739 TTIRIFKNLRTCGDCHNFFRFLSWVVQRDIILRDRKRFHHFRNGECSCGNFW 790
Score = 168 bits (426), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 136/556 (24%), Positives = 243/556 (43%), Gaps = 77/556 (13%)
Query: 57 KPNSLSLTRSLCEFVDSGAMDNALYLFEKMN--QPDTYIWNVIIRGFSNKGLFQEVIDFY 114
+P+ ++ T + + SG + A +FEK DT ++N +I GFS+ I+ +
Sbjct: 77 EPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLF 136
Query: 115 HRMEYEGIGIDNFTFPFVIKACGRLLSFIEGK--KVHGKLIKIGLDRDIYVCNSLIDMYF 172
+M++EG DNFTF V+ L++ E + + H +K G V N+L+ +Y
Sbjct: 137 CKMKHEGFKPDNFTFASVLAGLA-LVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYS 195
Query: 173 KFG----FVEVAEKVFEAMPLRDLVSWNCMV-----NGYRVIGDGL-------------- 209
K + A KVF+ + +D SW M+ NGY +G+ L
Sbjct: 196 KCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYN 255
Query: 210 -------------KSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRN 256
++L + M+ G + D + S + C+ ++ GK++H V+R
Sbjct: 256 AMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRR 315
Query: 257 GLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCL 316
+ SL+ +Y KCGK D A +F +M K++V+WNA++ GY +GH E+
Sbjct: 316 E-DFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIF 374
Query: 317 KRMQEDNLIPDAITMINL-------------------------------LPSCSKFGTLL 345
K M+E N++ I + L + SC+ G
Sbjct: 375 KEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYC 434
Query: 346 EGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYV 405
G+ H ++ F L AL+ MY KCG ++ A VF + + VSWNA+IAA
Sbjct: 435 NGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALG 494
Query: 406 QNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQ-IHAYITKLELSSNT 464
Q+G EA++++ + + ++PD +T+ ++L A + V + ++ + T +
Sbjct: 495 QHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGA 554
Query: 465 FTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVS-WNTMIMAYAIHGFGTISIQLFSRMKQ 523
++ + + G A +S+ FK W ++ +H G + + + + K
Sbjct: 555 DHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVH--GNMELGIIAADKL 612
Query: 524 NGIEPNESTFVSLLSS 539
G+ P LLS+
Sbjct: 613 FGLIPEHDGTYMLLSN 628
Score = 166 bits (421), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 110/391 (28%), Positives = 187/391 (47%), Gaps = 35/391 (8%)
Query: 55 MIKPNSLSLTRSLCEFVDSGAMDNALYLFEKMNQPDTYI-WNVIIRGFSNKGLFQEVIDF 113
+++ + S T + +V +G D L E M+ + +N +I G+ N+G +QE ++
Sbjct: 214 ILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEM 273
Query: 114 YHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFK 173
RM GI +D FT+P VI+AC GK+VH +++ D + NSL+ +Y+K
Sbjct: 274 VRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRRE-DFSFHFDNSLVSLYYK 332
Query: 174 FGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEML-------------- 219
G + A +FE MP +DLVSWN +++GY G ++ + FKEM
Sbjct: 333 CGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGL 392
Query: 220 ---GLGE--------------KPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDI 262
G GE +P + ++ C++ G++ H Q+++ G + +
Sbjct: 393 AENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSL 452
Query: 263 MVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQED 322
+LI MYAKCG V+ A +VF M C + V+WNA+I +GH E+ + M +
Sbjct: 453 SAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKK 512
Query: 323 NLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETA-LVDMYGKCGQLKF 381
+ PD IT++ +L +CS G + +G+ +P A L+D+ + G+
Sbjct: 513 GIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSD 572
Query: 382 AECVFGRINEKNMVS-WNAIIAAYVQNGRNE 411
AE V + K W A+++ +G E
Sbjct: 573 AESVIESLPFKPTAEIWEALLSGCRVHGNME 603
Score = 129 bits (324), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 137/274 (50%), Gaps = 11/274 (4%)
Query: 39 KSNPTKKQMSETPKRGMIKPNSLSLTRSLCEFVDSGAMDNALYLFEKMNQPDTYIWNVII 98
K + + + P + ++ N+L L +V SG + A +F++M + + W ++I
Sbjct: 335 KFDEARAIFEKMPAKDLVSWNAL-----LSGYVSSGHIGEAKLIFKEMKEKNILSWMIMI 389
Query: 99 RGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLD 158
G + G +E + + M+ EG ++ F IK+C L ++ G++ H +L+KIG D
Sbjct: 390 SGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFD 449
Query: 159 RDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEM 218
+ N+LI MY K G VE A +VF MP D VSWN ++ G G +++ ++EM
Sbjct: 450 SSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEM 509
Query: 219 LGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQ---VIRNGLELDIMVQTSLIDMYAKC 275
L G +PDR+++++ L CS V G++ V R D + LID+ +
Sbjct: 510 LKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYAR--LIDLLCRS 567
Query: 276 GKVDYAERVFNEMTCKNIVA-WNAMIGGYAINGH 308
GK AE V + K W A++ G ++G+
Sbjct: 568 GKFSDAESVIESLPFKPTAEIWEALLSGCRVHGN 601
>AT2G01510.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:230752-232506 REVERSE
Length = 584
Score = 369 bits (946), Expect = e-102, Method: Compositional matrix adjust.
Identities = 210/558 (37%), Positives = 321/558 (57%), Gaps = 4/558 (0%)
Query: 247 KEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAIN 306
K+IH V+R G + T L++ G + YA +VF+EM I WN + GY N
Sbjct: 28 KKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRN 87
Query: 307 GHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLE 366
ES K+M++ + PD T ++ + S+ G G +H + ++ F ++
Sbjct: 88 QLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVA 147
Query: 367 TALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLK 426
T LV MY K G+L AE +F + K++V+WNA +A VQ G + ALE F+ + ++
Sbjct: 148 TELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQ 207
Query: 427 PDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRY 486
D+ T+ S+L A +L ++ ++I+ K E+ N NA + M+ KCG+ + AR
Sbjct: 208 FDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVL 267
Query: 487 FDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLV 546
F+ M +N+VSW+TMI+ YA++G ++ LF+ M+ G+ PN TF+ +LS+CS +GLV
Sbjct: 268 FEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLV 327
Query: 547 NEGWELFNSMKM--DYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSL 604
NEG F+ M D N++ EHY CMVDLLGR+G L+ A +FI++MP+ P IWG+L
Sbjct: 328 NEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGAL 387
Query: 605 LTASRNNNDIFFAEFAAKHILSHDNDNTGCYVLLANMYAEAGRWEDVEQIKLVMKKKGLA 664
L A + D+ + A ++ D +VLL+N+YA AG+W+ V++++ M+K G
Sbjct: 388 LGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKMRKLGTK 447
Query: 665 KTVDCCTVESKGKSQKFINNNKSHQQAYMIYDVLDIILKKIGEDVYI-HSLSKFRPADVI 723
K +VE +GK F +KSH Q+ IY+ LD ILKKI + Y+ + S F ++
Sbjct: 448 KVAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEKLDEILKKIRKMGYVPDTCSVFHDVEME 507
Query: 724 KKKMKSPQNHSVKLAICFGLISTAIGKPIIIRKNTRICKDCHIAAKKISRVTKREIIVGD 783
+K+ S +HS KLAI FGLI G PI + KN R C DCH +K +S +T EII+ D
Sbjct: 508 EKEC-SLSHHSEKLAIAFGLIKGRPGHPIRVMKNLRTCDDCHAFSKFVSSLTSTEIIMRD 566
Query: 784 SKIFHHFEDGRCSCGDYW 801
FHHF +G CSC ++W
Sbjct: 567 KNRFHHFRNGVCSCKEFW 584
Score = 184 bits (467), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 117/386 (30%), Positives = 199/386 (51%), Gaps = 9/386 (2%)
Query: 26 APKRDLLVNPRIRKSNPTKKQMSE----TPKRGMIKPNSLSLTRSLCEFVDSGAMDNALY 81
P +++ +R S+ KQ+ + + G + NSL LT+ L V G M A
Sbjct: 6 TPLTKQMLSELLRASSSKPKQLKKIHAIVLRTGFSEKNSL-LTQLLENLVVIGDMCYARQ 64
Query: 82 LFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLS 141
+F++M++P ++WN + +G+ L E + Y +M G+ D FT+PFV+KA +L
Sbjct: 65 VFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGD 124
Query: 142 FIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNG 201
F G +H ++K G V L+ MY KFG + AE +FE+M ++DLV+WN +
Sbjct: 125 FSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAV 184
Query: 202 YRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELD 261
G+ +L F +M + D +++S L C + G+EI+ + + ++ +
Sbjct: 185 CVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCN 244
Query: 262 IMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQE 321
I+V+ + +DM+ KCG + A +F EM +N+V+W+ MI GYA+NG E+ T MQ
Sbjct: 245 IIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQN 304
Query: 322 DNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIR---KMFLPHLVLETALVDMYGKCGQ 378
+ L P+ +T + +L +CS G + EGK ++ K P +VD+ G+ G
Sbjct: 305 EGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGL 364
Query: 379 LKFA-ECVFGRINEKNMVSWNAIIAA 403
L+ A E + E + W A++ A
Sbjct: 365 LEEAYEFIKKMPVEPDTGIWGALLGA 390
Score = 155 bits (393), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 103/375 (27%), Positives = 186/375 (49%), Gaps = 20/375 (5%)
Query: 146 KKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVI 205
KK+H +++ G + L++ G + A +VF+ M + WN + GY
Sbjct: 28 KKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRN 87
Query: 206 GDGLKSLMCFKEMLGLGEKPDRLS------MISSLGGCSIGCCVRGGKEIHCQVIRNGLE 259
+SL+ +K+M LG +PD + IS LG S G +H V++ G
Sbjct: 88 QLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFA------LHAHVVKYGFG 141
Query: 260 LDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRM 319
+V T L+ MY K G++ AE +F M K++VAWNA + G+ + +M
Sbjct: 142 CLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKM 201
Query: 320 QEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQL 379
D + D+ T++++L +C + G+L G+ I+ A ++ ++++E A +DM+ KCG
Sbjct: 202 CADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNT 261
Query: 380 KFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAY 439
+ A +F + ++N+VSW+ +I Y NG + EAL LF ++N+ L+P+ VT +L A
Sbjct: 262 EAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSAC 321
Query: 440 AELATVSECKQIHAYITK-----LELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFK- 493
+ V+E K+ + + + LE + +V + + G L+ A + M +
Sbjct: 322 SHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYA--CMVDLLGRSGLLEEAYEFIKKMPVEP 379
Query: 494 NLVSWNTMIMAYAIH 508
+ W ++ A A+H
Sbjct: 380 DTGIWGALLGACAVH 394
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 72/167 (43%), Gaps = 16/167 (9%)
Query: 447 ECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYA 506
+ K+IHA + + S ++ GD+ AR+ FD M + WNT+ Y
Sbjct: 26 QLKKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYV 85
Query: 507 IHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGI 566
+ S+ L+ +M+ G+ P+E T+ ++ + S G + G+ L + + YG
Sbjct: 86 RNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHV-----VKYG- 139
Query: 567 EHYGC-------MVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLT 606
+GC +V + + G L +A+ E M V W + L
Sbjct: 140 --FGCLGIVATELVMMYMKFGELSSAEFLFESMQ-VKDLVAWNAFLA 183
>AT5G65570.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:26203968-26206184 FORWARD
Length = 738
Score = 365 bits (936), Expect = e-101, Method: Compositional matrix adjust.
Identities = 227/676 (33%), Positives = 361/676 (53%), Gaps = 8/676 (1%)
Query: 129 FPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMP 188
F +++ C S K + ++K G +I + L+D K G ++ A +VF+ M
Sbjct: 68 FSQLLRQCIDERSISGIKTIQAHMLKSGFPAEIS-GSKLVDASLKCGDIDYARQVFDGMS 126
Query: 189 LRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKE 248
R +V+WN ++ +++ ++ M+ PD ++ S S + +
Sbjct: 127 ERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQR 186
Query: 249 IHCQVIRNGLEL-DIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAING 307
H + GLE+ ++ V ++L+DMY K GK A+ V + + K++V A+I GY+ G
Sbjct: 187 SHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKG 246
Query: 308 HFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLET 367
E+ + M + + P+ T ++L SC + GK IHG ++ F L +T
Sbjct: 247 EDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQT 306
Query: 368 ALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKP 427
+L+ MY +C + + VF I N VSW ++I+ VQNGR E AL F + ++KP
Sbjct: 307 SLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKP 366
Query: 428 DAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYF 487
++ T++S L + LA E +QIH +TK + + + ++ +Y KCG AR F
Sbjct: 367 NSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVF 426
Query: 488 DSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVN 547
D++S +++S NTMI +YA +GFG ++ LF RM G++PN+ T +S+L +C+ S LV
Sbjct: 427 DTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVE 486
Query: 548 EGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTA 607
EG ELF+S + D I +HY CMVDLLGR G L+ A+ E+ + P +W +LL+A
Sbjct: 487 EGCELFDSFRKD-KIMLTNDHYACMVDLLGRAGRLEEAEMLTTEV-INPDLVLWRTLLSA 544
Query: 608 SRNNNDIFFAEFAAKHILSHDNDNTGCYVLLANMYAEAGRWEDVEQIKLVMKKKGLAKTV 667
+ + + AE + IL + + G +L++N+YA G+W V ++K MK L K
Sbjct: 545 CKVHRKVEMAERITRKILEIEPGDEGTLILMSNLYASTGKWNRVIEMKSKMKDMKLKKNP 604
Query: 668 DCCTVESKGKSQKFINNNK-SHQQAYMIYDVLDIILKKIGEDVYIHSLS-KFRPADVIKK 725
VE ++ F+ + SH + I + L+ ++KK + Y+ S F+ + K
Sbjct: 605 AMSWVEINKETHTFMAGDLFSHPNSEQILENLEELIKKSKDLGYVEDKSCVFQDMEETAK 664
Query: 726 KMKSPQNHSVKLAICFGLISTAIGKPIIIRKNTRICKDCHIAAKKISRVTKREIIVGDSK 785
+ +S HS KLAI F + +G I I KN R+C DCH K +SRV KREII DSK
Sbjct: 665 E-RSLHQHSEKLAIAFAVWRN-VGGSIRILKNLRVCVDCHSWIKIVSRVMKREIICRDSK 722
Query: 786 IFHHFEDGRCSCGDYW 801
FHHF DG CSCGDYW
Sbjct: 723 RFHHFRDGSCSCGDYW 738
Score = 203 bits (516), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 140/504 (27%), Positives = 254/504 (50%), Gaps = 8/504 (1%)
Query: 58 PNSLSLTRSLCEFVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRM 117
P +S ++ + + G +D A +F+ M++ WN +I +E ++ Y M
Sbjct: 97 PAEISGSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLM 156
Query: 118 EYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLD-RDIYVCNSLIDMYFKFGF 176
+ D +T V KA L E ++ HG + +GL+ +++V ++L+DMY KFG
Sbjct: 157 ITNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGK 216
Query: 177 VEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGG 236
A+ V + + +D+V ++ GY G+ +++ F+ ML +P+ + S L
Sbjct: 217 TREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLIS 276
Query: 237 CSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAW 296
C + GK IH ++++G E + QTSL+ MY +C VD + RVF + N V+W
Sbjct: 277 CGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSW 336
Query: 297 NAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIR 356
++I G NG + ++M D++ P++ T+ + L CS EG+ IHG +
Sbjct: 337 TSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTK 396
Query: 357 KMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALEL 416
F + L+D+YGKCG A VF ++E +++S N +I +Y QNG EAL+L
Sbjct: 397 YGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDL 456
Query: 417 FHCLRNQTLKPDAVTIASILPAYAELATVSE-CKQIHAYIT-KLELSSNTFTSNAIVYMY 474
F + N L+P+ VT+ S+L A V E C+ ++ K+ L+++ + +V +
Sbjct: 457 FERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKDKIMLTNDHYA--CMVDLL 514
Query: 475 AKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEP-NESTF 533
+ G L+ A + +LV W T++ A +H ++ ++ ++ + IEP +E T
Sbjct: 515 GRAGRLEEAEMLTTEVINPDLVLWRTLLSACKVHRKVEMAERITRKILE--IEPGDEGTL 572
Query: 534 VSLLSSCSISGLVNEGWELFNSMK 557
+ + + + +G N E+ + MK
Sbjct: 573 ILMSNLYASTGKWNRVIEMKSKMK 596
>AT4G19191.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 13 plant structures;
EXPRESSED DURING: 10 growth stages; CONTAINS InterPro
DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885);
BEST Arabidopsis thaliana protein match is: CRR22
(CHLORORESPIRATORY REDUCTION22); endonuclease
(TAIR:AT1G11290.1); Has 16668 Blast hits to 5144
proteins in 160 species: Archae - 1; Bacteria - 6;
Metazoa - 71; Fungi - 62; Plants - 16190; Viruses - 0;
Other Eukaryotes - 338 (source: NCBI BLink). |
chr4:10496228-10498192 FORWARD
Length = 654
Score = 364 bits (935), Expect = e-100, Method: Compositional matrix adjust.
Identities = 207/612 (33%), Positives = 323/612 (52%), Gaps = 9/612 (1%)
Query: 94 WNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLI 153
WN+ IR N+ E + + M+ G +NFTFPFV KAC RL + VH LI
Sbjct: 20 WNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLI 79
Query: 154 KIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLM 213
K D++V + +DM+ K V+ A KVFE MP RD +WN M++G+ G K+
Sbjct: 80 KSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFS 139
Query: 214 CFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYA 273
F+EM PD +++++ + S ++ + +H IR G+++ + V + I Y
Sbjct: 140 LFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYG 199
Query: 274 KCGKVDYAERVFNEMTC--KNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITM 331
KCG +D A+ VF + + +V+WN+M Y++ G ++F M + PD T
Sbjct: 200 KCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTF 259
Query: 332 INLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINE 391
INL SC TL +G+ IH +AI + + MY K A +F +
Sbjct: 260 INLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTS 319
Query: 392 KNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQI 451
+ VSW +I+ Y + G +EAL LFH + KPD VT+ S++ + ++ K I
Sbjct: 320 RTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWI 379
Query: 452 HA----YITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAI 507
A Y K + N NA++ MY+KCG + AR FD+ K +V+W TMI YA+
Sbjct: 380 DARADIYGCKRD---NVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYAL 436
Query: 508 HGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIE 567
+G +++LFS+M +PN TF+++L +C+ SG + +GWE F+ MK YNI G++
Sbjct: 437 NGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLD 496
Query: 568 HYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTASRNNNDIFFAEFAAKHILSH 627
HY CMVDLLGR G L+ A + I M P A IWG+LL A + + ++ AE AA+ + +
Sbjct: 497 HYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAESLFNL 556
Query: 628 DNDNTGCYVLLANMYAEAGRWEDVEQIKLVMKKKGLAKTVDCCTVESKGKSQKFINNNKS 687
+ YV +AN+YA AG W+ +I+ +MK++ + K ++ GK+ F
Sbjct: 557 EPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVIQVNGKNHSFTVGEHG 616
Query: 688 HQQAYMIYDVLD 699
H + +IY L+
Sbjct: 617 HVENEVIYFTLN 628
Score = 194 bits (492), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 122/454 (26%), Positives = 219/454 (48%), Gaps = 32/454 (7%)
Query: 179 VAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCS 238
+ +++ L + +WN + D ++SL+ F+EM G +P+ + C+
Sbjct: 4 IHRRLYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACA 63
Query: 239 ----IGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIV 294
+GCC + +H +I++ D+ V T+ +DM+ KC VDYA +VF M ++
Sbjct: 64 RLADVGCC----EMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDAT 119
Query: 295 AWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYA 354
WNAM+ G+ +GH ++F+ + M+ + + PD++T++ L+ S S +L + +H
Sbjct: 120 TWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVG 179
Query: 355 IRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRIN--EKNMVSWNAIIAAYVQNGRNEE 412
IR + + + YGKCG L A+ VF I+ ++ +VSWN++ AY G +
Sbjct: 180 IRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFD 239
Query: 413 ALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVY 472
A L+ + + KPD T ++ + T+++ + IH++ L + N +
Sbjct: 240 AFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFIS 299
Query: 473 MYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNEST 532
MY+K D +AR FD M+ + VSW MI YA G ++ LF M ++G +P+ T
Sbjct: 300 MYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVT 359
Query: 533 FVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGC----------MVDLLGRTGNL 582
+SL+S C F S++ ID + YGC ++D+ + G++
Sbjct: 360 LLSLISGCG----------KFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSI 409
Query: 583 DAAKQFIEEMPLVPTARIWGSLLTASRNNNDIFF 616
A+ + P T W +++ A N IF
Sbjct: 410 HEARDIFDNTP-EKTVVTWTTMI-AGYALNGIFL 441
Score = 194 bits (492), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 133/450 (29%), Positives = 212/450 (47%), Gaps = 5/450 (1%)
Query: 64 TRSLCEFVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIG 123
T ++ FV ++D A +FE+M + D WN ++ GF G + + M I
Sbjct: 91 TATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEIT 150
Query: 124 IDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKV 183
D+ T +I++ S + +H I++G+D + V N+ I Y K G ++ A+ V
Sbjct: 151 PDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLV 210
Query: 184 FEAMPL--RDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGC 241
FEA+ R +VSWN M Y V G+ + + ML KPD + I+ C
Sbjct: 211 FEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPE 270
Query: 242 CVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIG 301
+ G+ IH I G + DI + I MY+K A +F+ MT + V+W MI
Sbjct: 271 TLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMIS 330
Query: 302 GYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYA-IRKMFL 360
GYA G E+ M + PD +T+++L+ C KFG+L GK I A I
Sbjct: 331 GYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKR 390
Query: 361 PHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCL 420
++++ AL+DMY KCG + A +F EK +V+W +IA Y NG EAL+LF +
Sbjct: 391 DNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKM 450
Query: 421 RNQTLKPDAVTIASILPAYAELATVSE-CKQIHAYITKLELSSNTFTSNAIVYMYAKCGD 479
+ KP+ +T ++L A A ++ + + H +S + +V + + G
Sbjct: 451 IDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGK 510
Query: 480 LQTARRYFDSMSFKNLVS-WNTMIMAYAIH 508
L+ A +MS K W ++ A IH
Sbjct: 511 LEEALELIRNMSAKPDAGIWGALLNACKIH 540
>AT2G03880.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:1181560-1183452 FORWARD
Length = 630
Score = 364 bits (934), Expect = e-100, Method: Compositional matrix adjust.
Identities = 199/569 (34%), Positives = 323/569 (56%), Gaps = 12/569 (2%)
Query: 239 IGCC-----VRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNI 293
I CC V G I + NG + + LI+MY K ++ A ++F++M +N+
Sbjct: 68 IKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNV 127
Query: 294 VAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGY 353
++W MI Y+ ++ L M DN+ P+ T ++L SC+ + + +H
Sbjct: 128 ISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDV---RMLHCG 184
Query: 354 AIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEA 413
I++ + + +AL+D++ K G+ + A VF + + + WN+II + QN R++ A
Sbjct: 185 IIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVA 244
Query: 414 LELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYM 473
LELF ++ + T+ S+L A LA + Q H +I K + + +NA+V M
Sbjct: 245 LELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYD--QDLILNNALVDM 302
Query: 474 YAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTF 533
Y KCG L+ A R F+ M +++++W+TMI A +G+ +++LF RMK +G +PN T
Sbjct: 303 YCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITI 362
Query: 534 VSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMP 593
V +L +CS +GL+ +GW F SMK Y ID EHYGCM+DLLG+ G LD A + + EM
Sbjct: 363 VGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEME 422
Query: 594 LVPTARIWGSLLTASRNNNDIFFAEFAAKHILSHDNDNTGCYVLLANMYAEAGRWEDVEQ 653
P A W +LL A R ++ AE+AAK +++ D ++ G Y LL+N+YA + +W+ VE+
Sbjct: 423 CEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEE 482
Query: 654 IKLVMKKKGLAKTVDCCTVESKGKSQKFINNNKSHQQAYMIYDVLDIILKKIGEDVYIHS 713
I+ M+ +G+ K C +E + FI + SH Q + L+ ++ ++ Y+
Sbjct: 483 IRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRLTGIGYVPE 542
Query: 714 LSKFRPADVIKKKMK-SPQNHSVKLAICFGLISTAIGKPIIIRKNTRICKDCHIAAKKIS 772
+ F D+ ++M+ S ++HS KLA+ FGL++ I K I IRKN RIC DCH+ K S
Sbjct: 543 -TNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTLPIEKVIRIRKNLRICGDCHVFCKLAS 601
Query: 773 RVTKREIIVGDSKIFHHFEDGRCSCGDYW 801
++ R I++ D +HHF+DG+CSCGDYW
Sbjct: 602 KLEIRSIVIRDPIRYHHFQDGKCSCGDYW 630
Score = 186 bits (472), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 120/425 (28%), Positives = 222/425 (52%), Gaps = 9/425 (2%)
Query: 117 MEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGF 176
++ G+ D+ T+ +IK C + EG + L G +++ N LI+MY KF
Sbjct: 52 LQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNL 111
Query: 177 VEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGG 236
+ A ++F+ MP R+++SW M++ Y K+L ML +P+ + S L
Sbjct: 112 LNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRS 171
Query: 237 CSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAW 296
C+ VR +HC +I+ GLE D+ V+++LID++AK G+ + A VF+EM + + W
Sbjct: 172 CNGMSDVR---MLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVW 228
Query: 297 NAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIR 356
N++IGG+A N + KRM+ I + T+ ++L +C+ L G H + ++
Sbjct: 229 NSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK 288
Query: 357 KMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALEL 416
+ L+L ALVDMY KCG L+ A VF ++ E+++++W+ +I+ QNG ++EAL+L
Sbjct: 289 --YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKL 346
Query: 417 FHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKL-ELSSNTFTSNAIVYMYA 475
F +++ KP+ +TI +L A + + + + KL + ++ +
Sbjct: 347 FERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLG 406
Query: 476 KCGDLQTARRYFDSMSFK-NLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFV 534
K G L A + + M + + V+W T++ A + + + ++ K ++P ++
Sbjct: 407 KAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQ--RNMVLAEYAAKKVIALDPEDAGTY 464
Query: 535 SLLSS 539
+LLS+
Sbjct: 465 TLLSN 469
Score = 153 bits (386), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 179/337 (53%), Gaps = 9/337 (2%)
Query: 70 FVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTF 129
+V +++A LF++M Q + W +I +S + Q+ ++ M + + + +T+
Sbjct: 106 YVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTY 165
Query: 130 PFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPL 189
V+++C + + +H +IK GL+ D++V ++LID++ K G E A VF+ M
Sbjct: 166 SSVLRSCN---GMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVT 222
Query: 190 RDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEI 249
D + WN ++ G+ +L FK M G ++ ++ S L C+ + G +
Sbjct: 223 GDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQA 282
Query: 250 HCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHF 309
H +++ + D+++ +L+DMY KCG ++ A RVFN+M ++++ W+ MI G A NG+
Sbjct: 283 HVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYS 340
Query: 310 LESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLET-- 367
E+ +RM+ P+ IT++ +L +CS G LLE + +++K++ V E
Sbjct: 341 QEALKLFERMKSSGTKPNYITIVGVLFACSHAG-LLEDGWYYFRSMKKLYGIDPVREHYG 399
Query: 368 ALVDMYGKCGQLKFAECVFGRIN-EKNMVSWNAIIAA 403
++D+ GK G+L A + + E + V+W ++ A
Sbjct: 400 CMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGA 436
Score = 110 bits (274), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 143/282 (50%), Gaps = 6/282 (2%)
Query: 311 ESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALV 370
+ + +Q L D+ T L+ C + EG I + P + L L+
Sbjct: 44 RAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLI 103
Query: 371 DMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAV 430
+MY K L A +F ++ ++N++SW +I+AY + +++ALEL + ++P+
Sbjct: 104 NMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVY 163
Query: 431 TIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSM 490
T +S+L + +S+ + +H I K L S+ F +A++ ++AK G+ + A FD M
Sbjct: 164 TYSSVLRS---CNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEM 220
Query: 491 SFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGW 550
+ + WN++I +A + ++++LF RMK+ G ++T S+L +C+ L+ G
Sbjct: 221 VTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGM 280
Query: 551 ELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEM 592
+ + + Y+ D + + +VD+ + G+L+ A + +M
Sbjct: 281 QAHVHI-VKYDQDLILNN--ALVDMYCKCGSLEDALRVFNQM 319
>AT1G56690.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:21253817-21255931 FORWARD
Length = 704
Score = 363 bits (932), Expect = e-100, Method: Compositional matrix adjust.
Identities = 217/740 (29%), Positives = 371/740 (50%), Gaps = 78/740 (10%)
Query: 74 GAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVI 133
G ++ A F+ + WN I+ G+ + GL +E + M
Sbjct: 31 GKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMS--------------- 75
Query: 134 KACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLV 193
+R++ N L+ Y K + A VFE MP R++V
Sbjct: 76 ------------------------ERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVV 111
Query: 194 SWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDR--LSMISSLGGCSIGCCVRGGKEIHC 251
SW MV GY G ++ F M P+R +S GG + G+
Sbjct: 112 SWTAMVKGYMQEGMVGEAESLFWRM------PERNEVSWTVMFGGL-----IDDGRIDKA 160
Query: 252 QVIRNGLEL-DIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFL 310
+ + + + + D++ T++I + G+VD A +F+EM +N+V W MI GY
Sbjct: 161 RKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGY------- 213
Query: 311 ESFTCLKRMQEDNLIPDAITMINLLPSCSK--FGTLLEGKCIHGYA------IRKMFLPH 362
+++N + A + ++P ++ + ++L G + G M +
Sbjct: 214 ---------RQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKP 264
Query: 363 LVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRN 422
++ A++ +G+ G++ A VF + +++ +W +I AY + G EAL+LF ++
Sbjct: 265 VIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQK 324
Query: 423 QTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQT 482
Q ++P ++ SIL A LA++ +Q+HA++ + + + + ++ ++ MY KCG+L
Sbjct: 325 QGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVK 384
Query: 483 ARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSI 542
A+ FD S K+++ WN++I YA HG G ++++F M +G PN+ T +++L++CS
Sbjct: 385 AKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSY 444
Query: 543 SGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWG 602
+G + EG E+F SM+ + + +EHY C VD+LGR G +D A + IE M + P A +WG
Sbjct: 445 AGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWG 504
Query: 603 SLLTASRNNNDIFFAEFAAKHILSHDNDNTGCYVLLANMYAEAGRWEDVEQIKLVMKKKG 662
+LL A + ++ + AE AAK + ++ DN G YVLL+++ A +W DV ++ M+
Sbjct: 505 ALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTNN 564
Query: 663 LAKTVDCCTVESKGKSQKFINNN-KSHQQAYMIYDVLDIILKKIGEDVYIHSLSKFRPAD 721
++K C +E K F K+H + MI +L+ + E Y S
Sbjct: 565 VSKFPGCSWIEVGKKVHMFTRGGIKNHPEQAMILMMLEKTDGLLREAGYSPDCSHVLHDV 624
Query: 722 VIKKKMKSPQNHSVKLAICFGLISTAIGKPIIIRKNTRICKDCHIAAKKISRVTKREIIV 781
++K+ S HS +LA+ +GL+ G PI + KN R+C DCH A K IS+VT+REII+
Sbjct: 625 DEEEKVDSLSRHSERLAVAYGLLKLPEGVPIRVMKNLRVCGDCHAAIKLISKVTEREIIL 684
Query: 782 GDSKIFHHFEDGRCSCGDYW 801
D+ FHHF +G CSC DYW
Sbjct: 685 RDANRFHHFNNGECSCRDYW 704
Score = 148 bits (373), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 114/491 (23%), Positives = 226/491 (46%), Gaps = 20/491 (4%)
Query: 55 MIKPNSLSLTRSLCEFVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFY 114
M + N +S + ++ + + A +FE M + + W +++G+ +G+ E +
Sbjct: 74 MSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLF 133
Query: 115 HRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKF 174
RM F +I GR+ KL + +D+ ++I +
Sbjct: 134 WRMPERNEVSWTVMFGGLIDD-GRI-------DKARKLYDMMPVKDVVASTNMIGGLCRE 185
Query: 175 GFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSL 234
G V+ A +F+ M R++V+W M+ GYR + +++ + + +S S L
Sbjct: 186 GRVDEARLIFDEMRERNVVTWTTMITGYR----QNNRVDVARKLFEVMPEKTEVSWTSML 241
Query: 235 GGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIV 294
G ++ + +E + ++ ++I + + G++ A RVF+ M ++
Sbjct: 242 LGYTLSGRIEDAEEFFEVMPMK----PVIACNAMIVGFGEVGEISKARRVFDLMEDRDNA 297
Query: 295 AWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYA 354
W MI Y G LE+ +MQ+ + P ++I++L C+ +L G+ +H +
Sbjct: 298 TWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHL 357
Query: 355 IRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEAL 414
+R F + + + L+ MY KCG+L A+ VF R + K+++ WN+II+ Y +G EEAL
Sbjct: 358 VRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEAL 417
Query: 415 ELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYI-TKLELSSNTFTSNAIVYM 473
++FH + + P+ VT+ +IL A + + E +I + +K ++ + V M
Sbjct: 418 KIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDM 477
Query: 474 YAKCGDLQTARRYFDSMSFK-NLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNEST 532
+ G + A +SM+ K + W ++ A H ++ ++ +N EP+ +
Sbjct: 478 LGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFEN--EPDNAG 535
Query: 533 FVSLLSSCSIS 543
LLSS + S
Sbjct: 536 TYVLLSSINAS 546
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/329 (22%), Positives = 139/329 (42%), Gaps = 66/329 (20%)
Query: 269 IDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDN----- 323
I ++ GK++ A + F+ + K I +WN+++ GY NG E+ M E N
Sbjct: 24 ISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWN 83
Query: 324 ----------LIPDAITMINLLPS------------------------------------ 337
+I +A + L+P
Sbjct: 84 GLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVS 143
Query: 338 -CSKFGTLLEGKCIHGYAIRKMF----LPHLVLETALVDMYGKCGQLKFAECVFGRINEK 392
FG L++ I RK++ + +V T ++ + G++ A +F + E+
Sbjct: 144 WTVMFGGLIDDGRID--KARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRER 201
Query: 393 NMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIH 452
N+V+W +I Y QN R + A +LF + +T V+ S+L Y + + ++
Sbjct: 202 NVVTWTTMITGYRQNNRVDVARKLFEVMPEKT----EVSWTSMLLGYTLSGRIEDAEEFF 257
Query: 453 AYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGT 512
+ NA++ + + G++ ARR FD M ++ +W MI AY GF
Sbjct: 258 EVMPM----KPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFEL 313
Query: 513 ISIQLFSRMKQNGIEPNESTFVSLLSSCS 541
++ LF++M++ G+ P+ + +S+LS C+
Sbjct: 314 EALDLFAQMQKQGVRPSFPSLISILSVCA 342
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/270 (21%), Positives = 107/270 (39%), Gaps = 65/270 (24%)
Query: 449 KQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIH 508
K++ + + L+S + + ++ G + AR++FDS+ FK + SWN+++ Y +
Sbjct: 2 KRLKLILRRTYLTSTGVNCSFEISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSN 61
Query: 509 GFGTISIQLFSRMKQ------NGI---------------------EPNESTFVSLLSSCS 541
G + QLF M + NG+ E N ++ +++
Sbjct: 62 GLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYM 121
Query: 542 ISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPL------- 594
G+V E LF M + + + +G ++D G +D A++ + MP+
Sbjct: 122 QEGMVGEAESLFWRMPERNEVSWTV-MFGGLID----DGRIDKARKLYDMMPVKDVVAST 176
Query: 595 -----------VPTARI------------WGSLLTASRNNNDIFFAEFAAKHILSHDNDN 631
V AR+ W +++T R NN + A ++ +
Sbjct: 177 NMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVAR-KLFEVMPEKTEV 235
Query: 632 TGCYVLLANMYAEAGRWEDVEQIKLVMKKK 661
+ +LL Y +GR ED E+ VM K
Sbjct: 236 SWTSMLLG--YTLSGRIEDAEEFFEVMPMK 263
>AT2G02980.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:868468-870279 FORWARD
Length = 603
Score = 362 bits (928), Expect = e-100, Method: Compositional matrix adjust.
Identities = 196/563 (34%), Positives = 323/563 (57%), Gaps = 5/563 (0%)
Query: 243 VRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKC---GKVDYAERVFNEMTCKNIVAWNAM 299
+R +I I++ +E D+ LI+ + + YA +F M+ +IV +N+M
Sbjct: 42 LRELMQIQAYAIKSHIE-DVSFVAKLINFCTESPTESSMSYARHLFEAMSEPDIVIFNSM 100
Query: 300 IGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMF 359
GY+ + LE F+ + ED ++PD T +LL +C+ L EG+ +H +++
Sbjct: 101 ARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGL 160
Query: 360 LPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHC 419
++ + L++MY +C + A CVF RI E +V +NA+I Y + R EAL LF
Sbjct: 161 DDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFRE 220
Query: 420 LRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGD 479
++ + LKP+ +T+ S+L + A L ++ K IH Y K + A++ M+AKCG
Sbjct: 221 MQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGS 280
Query: 480 LQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSS 539
L A F+ M +K+ +W+ MI+AYA HG S+ +F RM+ ++P+E TF+ LL++
Sbjct: 281 LDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNA 340
Query: 540 CSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTAR 599
CS +G V EG + F+ M + I I+HYG MVDLL R GNL+ A +FI+++P+ PT
Sbjct: 341 CSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPM 400
Query: 600 IWGSLLTASRNNNDIFFAEFAAKHILSHDNDNTGCYVLLANMYAEAGRWEDVEQIKLVMK 659
+W LL A ++N++ AE ++ I D+ + G YV+L+N+YA +WE V+ ++ VMK
Sbjct: 401 LWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKVMK 460
Query: 660 KKGLAKTVDCCTVESKGKSQKFINNNKSHQQAYMIYDVLDIILKKIGEDVYIHSLSKFRP 719
+ K C ++E +F + + ++ LD ++K++ Y+ S
Sbjct: 461 DRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKLSGYVPDTSMVVH 520
Query: 720 ADV-IKKKMKSPQNHSVKLAICFGLISTAIGKPIIIRKNTRICKDCHIAAKKISRVTKRE 778
A++ ++K + + HS KLAI FGL++T G I + KN R+C+DCH AAK IS + R+
Sbjct: 521 ANMNDQEKEITLRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCRDCHNAAKLISLIFGRK 580
Query: 779 IIVGDSKIFHHFEDGRCSCGDYW 801
+++ D + FHHFEDG+CSCGD+W
Sbjct: 581 VVLRDVQRFHHFEDGKCSCGDFW 603
Score = 186 bits (473), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 107/310 (34%), Positives = 176/310 (56%), Gaps = 1/310 (0%)
Query: 74 GAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVI 133
+M A +LFE M++PD I+N + RG+S EV + + +GI DN+TFP ++
Sbjct: 77 SSMSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLL 136
Query: 134 KACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLV 193
KAC + EG+++H +K+GLD ++YVC +LI+MY + V+ A VF+ + +V
Sbjct: 137 KACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVV 196
Query: 194 SWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQV 253
+N M+ GY ++L F+EM G KP+ ++++S L C++ + GK IH
Sbjct: 197 CYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYA 256
Query: 254 IRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESF 313
++ + V T+LIDM+AKCG +D A +F +M K+ AW+AMI YA +G +S
Sbjct: 257 KKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSM 316
Query: 314 TCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKM-FLPHLVLETALVDM 372
+RM+ +N+ PD IT + LL +CS G + EG+ + K +P + ++VD+
Sbjct: 317 LMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDL 376
Query: 373 YGKCGQLKFA 382
+ G L+ A
Sbjct: 377 LSRAGNLEDA 386
Score = 185 bits (469), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 101/332 (30%), Positives = 183/332 (55%), Gaps = 2/332 (0%)
Query: 180 AEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSI 239
A +FEAM D+V +N M GY + L+ F E+L G PD + S L C++
Sbjct: 82 ARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAV 141
Query: 240 GCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAM 299
+ G+++HC ++ GL+ ++ V +LI+MY +C VD A VF+ + +V +NAM
Sbjct: 142 AKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAM 201
Query: 300 IGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMF 359
I GYA E+ + + MQ L P+ IT++++L SC+ G+L GK IH YA + F
Sbjct: 202 ITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSF 261
Query: 360 LPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHC 419
++ + TAL+DM+ KCG L A +F ++ K+ +W+A+I AY +G+ E+++ +F
Sbjct: 262 CKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFER 321
Query: 420 LRNQTLKPDAVTIASILPAYAELATVSECKQIHA-YITKLELSSNTFTSNAIVYMYAKCG 478
+R++ ++PD +T +L A + V E ++ + ++K + + ++V + ++ G
Sbjct: 322 MRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAG 381
Query: 479 DLQTARRYFDSMSFK-NLVSWNTMIMAYAIHG 509
+L+ A + D + + W ++ A + H
Sbjct: 382 NLEDAYEFIDKLPISPTPMLWRILLAACSSHN 413
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 64/121 (52%), Gaps = 1/121 (0%)
Query: 70 FVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTF 129
F G++D+A+ +FEKM DT W+ +I ++N G ++ + + RM E + D TF
Sbjct: 275 FAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITF 334
Query: 130 PFVIKACGRLLSFIEGKKVHGKLI-KIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMP 188
++ AC EG+K +++ K G+ I S++D+ + G +E A + + +P
Sbjct: 335 LGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLP 394
Query: 189 L 189
+
Sbjct: 395 I 395
>AT1G19720.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:6819926-6822610 REVERSE
Length = 894
Score = 360 bits (924), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 230/823 (27%), Positives = 399/823 (48%), Gaps = 118/823 (14%)
Query: 57 KPNSLSLTRSLCEFVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHR 116
+P+ T+ L + G + +A +F+ M + + + W+ +I +S + ++EV +
Sbjct: 112 EPDVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRL 171
Query: 117 MEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGF 176
M +G+ D+F FP +++ C GK +H +IK+G+ + V NS++ +Y K G
Sbjct: 172 MMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGE 231
Query: 177 VEVAEKVFEAMPLRD-----------------------------------LVSWNCMVNG 201
++ A K F M RD LV+WN ++ G
Sbjct: 232 LDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGG 291
Query: 202 YRVIG---------------------------------DGLK--SLMCFKEMLGLGEKPD 226
Y +G +G++ +L F++M G P+
Sbjct: 292 YNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPN 351
Query: 227 RLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFN 286
++++S++ CS + G E+H ++ G D++V SL+DMY+KCGK++ A +VF+
Sbjct: 352 AVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFD 411
Query: 287 EMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLE 346
+ K++ WN+MI GY G+ +++ RMQ+ NL P+ IT + T++
Sbjct: 412 SVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIIT----------WNTMIS 461
Query: 347 GKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQ 406
G +G E +D++ + + G++ ++N +WN IIA Y+Q
Sbjct: 462 GYIKNGD------------EGEAMDLFQRMEK-------DGKV-QRNTATWNLIIAGYIQ 501
Query: 407 NGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFT 466
NG+ +EALELF ++ P++VTI S+LPA A L ++IH + + L +
Sbjct: 502 NGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAV 561
Query: 467 SNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGI 526
NA+ YAK GD++ +R F M K++++WN++I Y +HG ++ LF++MK GI
Sbjct: 562 KNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGI 621
Query: 527 EPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAK 586
PN T S++ + + G V+EG ++F S+ DY+I +EH MV L GR L+ A
Sbjct: 622 TPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRANRLEEAL 681
Query: 587 QFIEEMPLVPTARIWGSLLTASRNNNDIFFAEFAAKHILSHDNDNTGCYVLLANMYAEAG 646
QFI+EM + IW S LT R + DI A AA+++ S + +NT +++ +YA
Sbjct: 682 QFIQEMNIQSETPIWESFLTGCRIHGDIDMAIHAAENLFSLEPENTATESIVSQIYALGA 741
Query: 647 RWEDVEQIKLVMKKKGLAKTVDCCTVESKGKSQKFINNNKSHQQAYMIYDV------LDI 700
+ + + L K + +E + F ++S ++Y + LD
Sbjct: 742 KLGRSLEGNKPRRDNLLKKPLGQSWIEVRNLIHTFTTGDQSKLCTDVLYPLVEKMSRLDN 801
Query: 701 ILKKIGEDVYIHSLSKFRPADVIKKKMKSPQNHSVKLAICFGLISTAIGKPIIIR--KNT 758
+ +++I + + HS K A+ FGLIS++ IR KN
Sbjct: 802 RSDQYNGELWIEEEGREETCGI----------HSEKFAMAFGLISSSGASKTTIRILKNL 851
Query: 759 RICKDCHIAAKKISRVTKREIIVGDSKIFHHFEDGRCSCGDYW 801
R+C+DCH AK +S+ +I++ D++ HHF++G CSC DYW
Sbjct: 852 RMCRDCHDTAKYVSKRYGCDILLEDTRCLHHFKNGDCSCKDYW 894
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 90/306 (29%), Positives = 150/306 (49%), Gaps = 7/306 (2%)
Query: 306 NGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFL-PHLV 364
NG LE+ L + + T + LL SC G++ G+ +H A +F P +
Sbjct: 59 NGSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILH--ARFGLFTEPDVF 116
Query: 365 LETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQT 424
+ET L+ MY KCG + A VF + E+N+ +W+A+I AY + R E +LF +
Sbjct: 117 VETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDG 176
Query: 425 LKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTAR 484
+ PD IL A V K IH+ + KL +SS SN+I+ +YAKCG+L A
Sbjct: 177 VLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFAT 236
Query: 485 RYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISG 544
++F M +++++WN++++AY +G +++L M++ GI P T+ L+ + G
Sbjct: 237 KFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLG 296
Query: 545 LVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPL---VPTARIW 601
+ +L M+ + I + + M+ L G A +M L VP A
Sbjct: 297 KCDAAMDLMQKMET-FGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTI 355
Query: 602 GSLLTA 607
S ++A
Sbjct: 356 MSAVSA 361
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 147/302 (48%), Gaps = 11/302 (3%)
Query: 56 IKPNSLSLTRSLCEFVDSGAMDNALYLFEKMN-----QPDTYIWNVIIRGFSNKGLFQEV 110
++PN ++ + ++ +G A+ LF++M Q +T WN+II G+ G E
Sbjct: 449 LRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEA 508
Query: 111 IDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDM 170
++ + +M++ ++ T ++ AC LL +++HG +++ LD V N+L D
Sbjct: 509 LELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDT 568
Query: 171 YFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSM 230
Y K G +E + +F M +D+++WN ++ GY + G +L F +M G P+R ++
Sbjct: 569 YAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTL 628
Query: 231 ISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQ-TSLIDMYAKCGKVDYAERVFNEMT 289
S + + V GK++ + + + + ++++ +Y + +++ A + EM
Sbjct: 629 SSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMN 688
Query: 290 CKNIVA-WNAMIGGYAINGHF---LESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLL 345
++ W + + G I+G + + L ++ +N ++I + + +K G L
Sbjct: 689 IQSETPIWESFLTGCRIHGDIDMAIHAAENLFSLEPENTATESI-VSQIYALGAKLGRSL 747
Query: 346 EG 347
EG
Sbjct: 748 EG 749
>AT5G39680.1 | Symbols: EMB2744 | EMB2744 (EMBRYO DEFECTIVE 2744) |
chr5:15884236-15886368 REVERSE
Length = 710
Score = 360 bits (923), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 208/675 (30%), Positives = 351/675 (52%), Gaps = 6/675 (0%)
Query: 132 VIKACGRLLSFIEGKKVHGKLI---KIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMP 188
++K C G+ +H LI + D Y NSLI++Y K A K+F+ MP
Sbjct: 37 LLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMP 96
Query: 189 LRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGE-KPDRLSMISSLGGCSIGCCVRGGK 247
R++VSW M+ GY+ G + L FK M GE +P+ CS + GK
Sbjct: 97 ERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGK 156
Query: 248 EIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAING 307
+ H ++ GL V+ +L+ MY+ C A RV +++ ++ +++ + GY G
Sbjct: 157 QFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECG 216
Query: 308 HFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLET 367
F E L++ ++ + + +T ++ L S L +H +R F +
Sbjct: 217 AFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEACG 276
Query: 368 ALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKP 427
AL++MYGKCG++ +A+ VF + +N+ I+ AY Q+ EEAL LF + + + P
Sbjct: 277 ALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPP 336
Query: 428 DAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYF 487
+ T A +L + AEL+ + + +H + K ++ NA+V MYAK G ++ AR+ F
Sbjct: 337 NEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAF 396
Query: 488 DSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVN 547
M+F+++V+WNTMI + HG G +++ F RM G PN TF+ +L +CS G V
Sbjct: 397 SGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVE 456
Query: 548 EGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTA 607
+G FN + +++ I+HY C+V LL + G A+ F+ P+ W +LL A
Sbjct: 457 QGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLLNA 516
Query: 608 SRNNNDIFFAEFAAKHILSHDNDNTGCYVLLANMYAEAGRWEDVEQIKLVMKKKGLAKTV 667
+ + A++ + +++G YVLL+N++A++ WE V +++ +M +G+ K
Sbjct: 517 CYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWEGVAKVRSLMNNRGVKKEP 576
Query: 668 DCCTVESKGKSQKFINNNKSHQQAYMIYDVLDIILKKIGEDVYIHSLS-KFRPADVIKKK 726
+ + ++ F+ + H + +IY + ++ KI Y ++ F D +++
Sbjct: 577 GVSWIGIRNQTHVFLAEDNQHPEITLIYAKVKEVMSKIKPLGYSPDVAGAFHDVDE-EQR 635
Query: 727 MKSPQNHSVKLAICFGLISTAIGKPIIIRKNTRICKDCHIAAKKISRVTKREIIVGDSKI 786
+ HS KLA+ +GLI T P+ + KN RIC DCH A K IS+++KR I++ DS
Sbjct: 636 EDNLSYHSEKLAVAYGLIKTPEKSPLYVTKNVRICDDCHSAIKLISKISKRYIVIRDSNR 695
Query: 787 FHHFEDGRCSCGDYW 801
FHHF DG+CSC DYW
Sbjct: 696 FHHFLDGQCSCCDYW 710
Score = 162 bits (409), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 119/463 (25%), Positives = 221/463 (47%), Gaps = 9/463 (1%)
Query: 82 LFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDN-FTFPFVIKACGRLL 140
LF+ M + + W +++G+ N G EV+ + M + G N F V K+C
Sbjct: 91 LFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSG 150
Query: 141 SFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVN 200
EGK+ HG +K GL +V N+L+ MY A +V + +P DL ++ ++
Sbjct: 151 RIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALS 210
Query: 201 GYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLEL 260
GY G + L ++ + L+ +SSL S + ++H +++R G
Sbjct: 211 GYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNA 270
Query: 261 DIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQ 320
++ +LI+MY KCGKV YA+RVF++ +NI ++ Y + F E+ +M
Sbjct: 271 EVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMD 330
Query: 321 EDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLK 380
+ P+ T LL S ++ L +G +HG ++ + H+++ ALV+MY K G ++
Sbjct: 331 TKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIE 390
Query: 381 FAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYA 440
A F + +++V+WN +I+ +G EALE F + P+ +T +L A +
Sbjct: 391 DARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACS 450
Query: 441 ELATVSE-CKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFK-NLVSW 498
+ V + + + K ++ + IV + +K G + A + + + ++V+W
Sbjct: 451 HIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAW 510
Query: 499 NTMIMAYAIHGFGTISIQLFSRMKQNGIE--PNESTFVSLLSS 539
T++ A + + +L ++ + IE PN+S LLS+
Sbjct: 511 RTLLNACYVRR----NYRLGKKVAEYAIEKYPNDSGVYVLLSN 549
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 92/352 (26%), Positives = 171/352 (48%), Gaps = 10/352 (2%)
Query: 59 NSLSLTRSLCEFVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRME 118
N+L SLC SG + A+ + + + D +++ + G+ G F+E +D +
Sbjct: 175 NTLVYMYSLC----SGNGE-AIRVLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTA 229
Query: 119 YEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVE 178
E +N T+ ++ L +VH ++++ G + ++ C +LI+MY K G V
Sbjct: 230 NEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVL 289
Query: 179 VAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCS 238
A++VF+ +++ +++ Y ++L F +M P+ + L +
Sbjct: 290 YAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIA 349
Query: 239 IGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNA 298
++ G +H V+++G +MV +L++MYAK G ++ A + F+ MT ++IV WN
Sbjct: 350 ELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNT 409
Query: 299 MIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKM 358
MI G + +G E+ RM IP+ IT I +L +CS G + +G ++K
Sbjct: 410 MISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKF 469
Query: 359 FL-PHLVLETALVDMYGKCGQLKFAECVFGRIN--EKNMVSWNAII-AAYVQ 406
+ P + T +V + K G K AE F R E ++V+W ++ A YV+
Sbjct: 470 DVQPDIQHYTCIVGLLSKAGMFKDAE-DFMRTAPIEWDVVAWRTLLNACYVR 520
>AT2G33680.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:14249608-14251791 FORWARD
Length = 727
Score = 360 bits (923), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 211/653 (32%), Positives = 340/653 (52%), Gaps = 11/653 (1%)
Query: 70 FVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQE---VIDFYHRMEYEGIGIDN 126
+ G + A +F + D WN +I G+S G V+ + M + I +
Sbjct: 59 YAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNA 118
Query: 127 FTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEA 186
+T + KA L S G++ H ++K+ DIYV SL+ MY K G VE KVF
Sbjct: 119 YTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAY 178
Query: 187 MPLRDLVSWNCMVNGYRVIG---DGLKSLMCFKEMLGLGEKPDRL--SMISSLGGCSIGC 241
MP R+ +W+ MV+GY G + +K F G D + +++SSL
Sbjct: 179 MPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAAT---I 235
Query: 242 CVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIG 301
V G++IHC I+NGL + + +L+ MY+KC ++ A ++F+ +N + W+AM+
Sbjct: 236 YVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVT 295
Query: 302 GYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLP 361
GY+ NG LE+ RM + P T++ +L +CS L EGK +H + ++ F
Sbjct: 296 GYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFER 355
Query: 362 HLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLR 421
HL TALVDMY K G L A F + E+++ W ++I+ YVQN NEEAL L+ ++
Sbjct: 356 HLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMK 415
Query: 422 NQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQ 481
+ P+ T+AS+L A + LAT+ KQ+H + K +A+ MY+KCG L+
Sbjct: 416 TAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLE 475
Query: 482 TARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCS 541
F K++VSWN MI + +G G +++LF M G+EP++ TFV+++S+CS
Sbjct: 476 DGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACS 535
Query: 542 ISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIW 601
G V GW FN M +D ++HY CMVDLL R G L AK+FIE + +W
Sbjct: 536 HKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLW 595
Query: 602 GSLLTASRNNNDIFFAEFAAKHILSHDNDNTGCYVLLANMYAEAGRWEDVEQIKLVMKKK 661
LL+A +N+ +A + +++ + + YV L+ +Y GR DVE++ M+
Sbjct: 596 RILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTALGRMRDVERVWKHMRAN 655
Query: 662 GLAKTVDCCTVESKGKSQKFINNNKSHQQAYMIYDVLDIILKKIGEDVYIHSL 714
G++K V C +E K + F+ + H D++ ++ +++ E+ ++ L
Sbjct: 656 GVSKEVGCSWIELKNQYHVFVVGDTMHPMIEETKDLVCLVSRQMIEEGFVTVL 708
Score = 209 bits (533), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 129/408 (31%), Positives = 210/408 (51%), Gaps = 9/408 (2%)
Query: 141 SFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVN 200
+ + G+ VHG++I+ G I N L++ Y K G + A +F A+ +D+VSWN ++
Sbjct: 29 NLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLIT 88
Query: 201 GYRVIGDGLKS----LMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRN 256
GY G G+ S + F+EM P+ ++ S G++ H V++
Sbjct: 89 GYSQNG-GISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKM 147
Query: 257 GLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLES---F 313
DI V TSL+ MY K G V+ +VF M +N W+ M+ GYA G E+ F
Sbjct: 148 SSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVF 207
Query: 314 TCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMY 373
R +E+ D + +L S + + G+ IH I+ L + L ALV MY
Sbjct: 208 NLFLREKEEGSDSDYV-FTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMY 266
Query: 374 GKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIA 433
KC L A +F ++N ++W+A++ Y QNG + EA++LF + + +KP TI
Sbjct: 267 SKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIV 326
Query: 434 SILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFK 493
+L A +++ + E KQ+H+++ KL + F + A+V MYAK G L AR+ FD + +
Sbjct: 327 GVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQER 386
Query: 494 NLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCS 541
++ W ++I Y + ++ L+ RMK GI PN+ T S+L +CS
Sbjct: 387 DVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACS 434
Score = 191 bits (486), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 116/377 (30%), Positives = 202/377 (53%), Gaps = 13/377 (3%)
Query: 245 GGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYA 304
G+ +H Q+IR G I L++ YAKCGK+ A +FN + CK++V+WN++I GY+
Sbjct: 32 AGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYS 91
Query: 305 INGHFLESFTCL---KRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLP 361
NG S+T + + M+ +++P+A T+ + + S + G+ H ++
Sbjct: 92 QNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFG 151
Query: 362 HLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHC-L 420
+ ++T+LV MY K G ++ VF + E+N +W+ +++ Y GR EEA+++F+ L
Sbjct: 152 DIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFL 211
Query: 421 RNQTLKPDA-VTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGD 479
R + D+ ++L + A V +QIH K L SNA+V MY+KC
Sbjct: 212 REKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCES 271
Query: 480 LQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSS 539
L A + FDS +N ++W+ M+ Y+ +G +++LFSRM GI+P+E T V +L++
Sbjct: 272 LNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNA 331
Query: 540 CSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNL-DAAKQF--IEEMPLVP 596
CS + EG +L +S + + + +VD+ + G L DA K F ++E +
Sbjct: 332 CSDICYLEEGKQL-HSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVA- 389
Query: 597 TARIWGSLLTASRNNND 613
+W SL++ N+D
Sbjct: 390 ---LWTSLISGYVQNSD 403
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 3/120 (2%)
Query: 425 LKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTAR 484
L P T+ L +++ + + +H I + S+ +N +V YAKCG L A
Sbjct: 10 LNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAH 69
Query: 485 RYFDSMSFKNLVSWNTMIMAYAIHGFGTIS---IQLFSRMKQNGIEPNESTFVSLLSSCS 541
F+++ K++VSWN++I Y+ +G + S +QLF M+ I PN T + + S
Sbjct: 70 SIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAES 129
>AT4G21065.2 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT4G33170.1); Has 16184 Blast hits to 5257
proteins in 175 species: Archae - 0; Bacteria - 4;
Metazoa - 118; Fungi - 47; Plants - 15742; Viruses - 0;
Other Eukaryotes - 273 (source: NCBI BLink). |
chr4:11246375-11247763 FORWARD
Length = 462
Score = 359 bits (922), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 181/456 (39%), Positives = 279/456 (61%), Gaps = 1/456 (0%)
Query: 347 GKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQ 406
G+ IH IR F + ++ +L+ +Y CG + A VF ++ EK++V+WN++I + +
Sbjct: 7 GETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAE 66
Query: 407 NGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFT 466
NG+ EEAL L+ + ++ +KPD TI S+L A A++ ++ K++H Y+ K+ L+ N +
Sbjct: 67 NGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHS 126
Query: 467 SNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQN-G 525
SN ++ +YA+CG ++ A+ FD M KN VSW ++I+ A++GFG +I+LF M+ G
Sbjct: 127 SNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEG 186
Query: 526 IEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAA 585
+ P E TFV +L +CS G+V EG+E F M+ +Y I+ IEH+GCMVDLL R G + A
Sbjct: 187 LLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKA 246
Query: 586 KQFIEEMPLVPTARIWGSLLTASRNNNDIFFAEFAAKHILSHDNDNTGCYVLLANMYAEA 645
++I+ MP+ P IW +LL A + D AEFA IL + +++G YVLL+NMYA
Sbjct: 247 YEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASE 306
Query: 646 GRWEDVEQIKLVMKKKGLAKTVDCCTVESKGKSQKFINNNKSHQQAYMIYDVLDIILKKI 705
RW DV++I+ M + G+ K VE + +F+ +KSH Q+ IY L + ++
Sbjct: 307 QRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRL 366
Query: 706 GEDVYIHSLSKFRPADVIKKKMKSPQNHSVKLAICFGLISTAIGKPIIIRKNTRICKDCH 765
+ Y+ +S ++K + HS K+AI F LIST PI + KN R+C DCH
Sbjct: 367 RSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCH 426
Query: 766 IAAKKISRVTKREIIVGDSKIFHHFEDGRCSCGDYW 801
+A K +S+V REI+V D FHHF++G CSC DYW
Sbjct: 427 LAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 462
Score = 166 bits (420), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 104/302 (34%), Positives = 165/302 (54%), Gaps = 9/302 (2%)
Query: 243 VRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGG 302
VR G+ IH VIR+G I VQ SL+ +YA CG V A +VF++M K++VAWN++I G
Sbjct: 4 VRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVING 63
Query: 303 YAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPH 362
+A NG E+ M + PD T+++LL +C+K G L GK +H Y I+ +
Sbjct: 64 FAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRN 123
Query: 363 LVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRN 422
L L+D+Y +CG+++ A+ +F + +KN VSW ++I NG +EA+ELF + +
Sbjct: 124 LHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMES 183
Query: 423 -QTLKPDAVTIASILPAYAELATVSECKQIHAYIT---KLELSSNTFTSNAIVYMYAKCG 478
+ L P +T IL A + V E + + K+E F +V + A+ G
Sbjct: 184 TEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHF--GCMVDLLARAG 241
Query: 479 DLQTARRYFDSMSFK-NLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLL 537
++ A Y SM + N+V W T++ A +HG ++ F+R++ +EPN S LL
Sbjct: 242 QVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLA--EFARIQILQLEPNHSGDYVLL 299
Query: 538 SS 539
S+
Sbjct: 300 SN 301
Score = 152 bits (383), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 92/276 (33%), Positives = 151/276 (54%), Gaps = 11/276 (3%)
Query: 145 GKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRV 204
G+ +H +I+ G IYV NSL+ +Y G V A KVF+ MP +DLV+WN ++NG+
Sbjct: 7 GETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAE 66
Query: 205 IGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMV 264
G ++L + EM G KPD +++S L C+ + GK +H +I+ GL ++
Sbjct: 67 NGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHS 126
Query: 265 QTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQE-DN 323
L+D+YA+CG+V+ A+ +F+EM KN V+W ++I G A+NG E+ K M+ +
Sbjct: 127 SNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEG 186
Query: 324 LIPDAITMINLLPSCSKFGTLLEG-----KCIHGYAIRKMFLPHLVLETALVDMYGKCGQ 378
L+P IT + +L +CS G + EG + Y I P + +VD+ + GQ
Sbjct: 187 LLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIE----PRIEHFGCMVDLLARAGQ 242
Query: 379 LKFA-ECVFGRINEKNMVSWNAIIAAYVQNGRNEEA 413
+K A E + + N+V W ++ A +G ++ A
Sbjct: 243 VKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLA 278
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 146/278 (52%), Gaps = 7/278 (2%)
Query: 70 FVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTF 129
+ + G + +A +F+KM + D WN +I GF+ G +E + Y M +GI D FT
Sbjct: 33 YANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTI 92
Query: 130 PFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPL 189
++ AC ++ + GK+VH +IK+GL R+++ N L+D+Y + G VE A+ +F+ M
Sbjct: 93 VSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVD 152
Query: 190 RDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGL-GEKPDRLSMISSLGGCSIGCCVRGGKE 248
++ VSW ++ G V G G +++ FK M G P ++ + L CS V+ G E
Sbjct: 153 KNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFE 212
Query: 249 IHCQVIRNGLELDIMVQ--TSLIDMYAKCGKVDYAERVFNEMTCK-NIVAWNAMIGGYAI 305
+ + +R +++ ++ ++D+ A+ G+V A M + N+V W ++G +
Sbjct: 213 -YFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTV 271
Query: 306 NGHF-LESFTCLKRMQ-EDNLIPDAITMINLLPSCSKF 341
+G L F ++ +Q E N D + + N+ S ++
Sbjct: 272 HGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRW 309
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 90/166 (54%), Gaps = 2/166 (1%)
Query: 442 LATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTM 501
+A V + IH+ + + S + N+++++YA CGD+ +A + FD M K+LV+WN++
Sbjct: 1 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSV 60
Query: 502 IMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYN 561
I +A +G ++ L++ M GI+P+ T VSLLS+C+ G + G + M +
Sbjct: 61 INGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYM-IKVG 119
Query: 562 IDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTA 607
+ + ++DL R G ++ AK +EM + + W SL+
Sbjct: 120 LTRNLHSSNVLLDLYARCGRVEEAKTLFDEM-VDKNSVSWTSLIVG 164
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE
Length = 895
Score = 359 bits (922), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 200/599 (33%), Positives = 328/599 (54%), Gaps = 8/599 (1%)
Query: 70 FVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTF 129
+ G M A+ +F ++ P W V++ G++ ++ + M + G+ I+N T
Sbjct: 295 YAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTV 354
Query: 130 PFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAM-- 187
VI ACGR E +VH + K G D V +LI MY K G ++++E+VFE +
Sbjct: 355 TSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDD 414
Query: 188 -PLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGG 246
+++V N M+ + K++ F ML G + D S+ S L S+ C+ G
Sbjct: 415 IQRQNIV--NVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLL---SVLDCLNLG 469
Query: 247 KEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAIN 306
K++H +++GL LD+ V +SL +Y+KCG ++ + ++F + K+ W +MI G+
Sbjct: 470 KQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEY 529
Query: 307 GHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLE 366
G+ E+ M +D PD T+ +L CS +L GK IHGY +R + L
Sbjct: 530 GYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLG 589
Query: 367 TALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLK 426
+ALV+MY KCG LK A V+ R+ E + VS +++I+ Y Q+G ++ LF +
Sbjct: 590 SALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFT 649
Query: 427 PDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRY 486
D+ I+SIL A A S Q+HAYITK+ L + ++++ MY+K G + +
Sbjct: 650 MDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKA 709
Query: 487 FDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLV 546
F ++ +L++W +I +YA HG ++Q+++ MK+ G +P++ TFV +LS+CS GLV
Sbjct: 710 FSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLV 769
Query: 547 NEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLT 606
E + NSM DY I+ HY CMVD LGR+G L A+ FI M + P A +WG+LL
Sbjct: 770 EESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLA 829
Query: 607 ASRNNNDIFFAEFAAKHILSHDNDNTGCYVLLANMYAEAGRWEDVEQIKLVMKKKGLAK 665
A + + ++ + AAK + + + G Y+ L+N+ AE G W++VE+ + +MK G+ K
Sbjct: 830 ACKIHGEVELGKVAAKKAIELEPSDAGAYISLSNILAEVGEWDEVEETRKLMKGTGVQK 888
Score = 231 bits (590), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 155/564 (27%), Positives = 283/564 (50%), Gaps = 12/564 (2%)
Query: 34 NPRIRKSNPTKKQMSETPKRGMIKPNSLSLTRSLCE-FVDSGAMDNALYLFEKMNQPDTY 92
N R+ TK + +R ++ P + LT+SL + +SG+M +A LF+ + QPD
Sbjct: 58 NSRLCNLRTTKILQAHLLRRYLL-PFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVV 116
Query: 93 IWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKL 152
N++I G+ LF+E + F+ +M + G + ++ VI AC L + + + V
Sbjct: 117 SCNIMISGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHT 176
Query: 153 IKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSL 212
IK+G V ++LID++ K E A KVF ++ WN ++ G +
Sbjct: 177 IKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVF 236
Query: 213 MCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMY 272
F EM +KPD + S L C+ +R GK + +VI+ G E D+ V T+++D+Y
Sbjct: 237 DLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAE-DVFVCTAIVDLY 295
Query: 273 AKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMI 332
AKCG + A VF+ + ++V+W M+ GY + + K M+ + + T+
Sbjct: 296 AKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVT 355
Query: 333 NLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVF---GRI 389
+++ +C + + E +H + + F + AL+ MY K G + +E VF I
Sbjct: 356 SVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDI 415
Query: 390 NEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECK 449
+N+V N +I ++ Q+ + +A+ LF + + L+ D ++ S+L L ++ K
Sbjct: 416 QRQNIV--NVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSV---LDCLNLGK 470
Query: 450 QIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHG 509
Q+H Y K L + +++ +Y+KCG L+ + + F + FK+ W +MI + +G
Sbjct: 471 QVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYG 530
Query: 510 FGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHY 569
+ +I LFS M +G P+EST ++L+ CS + G E+ + + ID G++
Sbjct: 531 YLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEI-HGYTLRAGIDKGMDLG 589
Query: 570 GCMVDLLGRTGNLDAAKQFIEEMP 593
+V++ + G+L A+Q + +P
Sbjct: 590 SALVNMYSKCGSLKLARQVYDRLP 613
Score = 218 bits (554), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 136/470 (28%), Positives = 237/470 (50%), Gaps = 9/470 (1%)
Query: 77 DNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKAC 136
++A +F + Y WN II G + V D +H M D++T+ V+ AC
Sbjct: 202 EDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAAC 261
Query: 137 GRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWN 196
L GK V ++IK G + D++VC +++D+Y K G + A +VF +P +VSW
Sbjct: 262 ASLEKLRFGKVVQARVIKCGAE-DVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWT 320
Query: 197 CMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRN 256
M++GY D +L FKEM G + + ++ S + C V ++H V ++
Sbjct: 321 VMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKS 380
Query: 257 GLELDIMVQTSLIDMYAKCGKVDYAERVF---NEMTCKNIVAWNAMIGGYAINGHFLESF 313
G LD V +LI MY+K G +D +E+VF +++ +NIV N MI ++ + ++
Sbjct: 381 GFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMITSFSQSKKPGKAI 438
Query: 314 TCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMY 373
RM ++ L D ++ +LL S L GK +HGY ++ + L + ++L +Y
Sbjct: 439 RLFTRMLQEGLRTDEFSVCSLL---SVLDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLY 495
Query: 374 GKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIA 433
KCG L+ + +F I K+ W ++I+ + + G EA+ LF + + PD T+A
Sbjct: 496 SKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLA 555
Query: 434 SILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFK 493
++L + ++ K+IH Y + + +A+V MY+KCG L+ AR+ +D +
Sbjct: 556 AVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPEL 615
Query: 494 NLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSIS 543
+ VS +++I Y+ HG LF M +G + S+L + ++S
Sbjct: 616 DPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALS 665
Score = 139 bits (351), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 93/369 (25%), Positives = 180/369 (48%), Gaps = 5/369 (1%)
Query: 241 CCVRGGKEIHCQVIRNGL-ELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAM 299
C +R K + ++R L D+ + SL+ Y+ G + A ++F+ + ++V+ N M
Sbjct: 62 CNLRTTKILQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIM 121
Query: 300 IGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMF 359
I GY + F ES +M + I+ +++ +CS L + + + I+ +
Sbjct: 122 ISGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGY 181
Query: 360 LPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHC 419
+ V+E+AL+D++ K + + A VF N+ WN IIA ++N +LFH
Sbjct: 182 FFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHE 241
Query: 420 LRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGD 479
+ KPD+ T +S+L A A L + K + A + K + + F AIV +YAKCG
Sbjct: 242 MCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCG-AEDVFVCTAIVDLYAKCGH 300
Query: 480 LQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSS 539
+ A F + ++VSW M+ Y ++++F M+ +G+E N T S++S+
Sbjct: 301 MAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISA 360
Query: 540 CSISGLVNEGWELFN-SMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTA 598
C +V E ++ K + +D + ++ + ++G++D ++Q E++ +
Sbjct: 361 CGRPSMVCEASQVHAWVFKSGFYLDSSVA--AALISMYSKSGDIDLSEQVFEDLDDIQRQ 418
Query: 599 RIWGSLLTA 607
I ++T+
Sbjct: 419 NIVNVMITS 427
>AT4G37170.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:17498580-17500655 REVERSE
Length = 691
Score = 358 bits (918), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 208/626 (33%), Positives = 332/626 (53%), Gaps = 32/626 (5%)
Query: 208 GLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTS 267
G K L ++LG +KP + + + CS + GK++H + +G I++
Sbjct: 66 GQKLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNR 125
Query: 268 LIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQED----- 322
L+ MYAKCG + A +VF+EM +++ +WN M+ GYA G E+ M E
Sbjct: 126 LLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSW 185
Query: 323 ---------------------------NLIPDAITMINLLPSCSKFGTLLEGKCIHGYAI 355
N P+ T+ + + + + GK IHG+ +
Sbjct: 186 TAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIV 245
Query: 356 RKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALE 415
R VL ++L+DMYGKCG + A +F +I EK++VSW ++I Y ++ R E
Sbjct: 246 RAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFS 305
Query: 416 LFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYA 475
LF L +P+ T A +L A A+L T KQ+H Y+T++ +F S+++V MY
Sbjct: 306 LFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYT 365
Query: 476 KCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVS 535
KCG++++A+ D +LVSW ++I A +G +++ F + ++G +P+ TFV+
Sbjct: 366 KCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVN 425
Query: 536 LLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLV 595
+LS+C+ +GLV +G E F S+ + + + +HY C+VDLL R+G + K I EMP+
Sbjct: 426 VLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMK 485
Query: 596 PTARIWGSLLTASRNNNDIFFAEFAAKHILSHDNDNTGCYVLLANMYAEAGRWEDVEQIK 655
P+ +W S+L +I AE AA+ + + +N YV +AN+YA AG+WE+ +++
Sbjct: 486 PSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMR 545
Query: 656 LVMKKKGLAKTVDCCTVESKGKSQKFINNNKSHQQAYMIYDVLDIILKKIGEDVYIHSLS 715
M++ G+ K E K K FI + SH I + L + KK+ E+ Y+ + S
Sbjct: 546 KRMQEIGVTKRPGSSWTEIKRKRHVFIAADTSHPMYNQIVEFLRELRKKMKEEGYVPATS 605
Query: 716 KFRPADVIKKKMKSPQNHSVKLAICFGLISTAIGKPIIIRKNTRICKDCHIAAKKISRVT 775
++K ++ HS KLA+ F ++ST G I + KN R C DCH A K IS +T
Sbjct: 606 LVLHDVEDEQKEENLVYHSEKLAVAFAILSTEEGTAIKVFKNLRSCVDCHGAIKFISNIT 665
Query: 776 KREIIVGDSKIFHHFEDGRCSCGDYW 801
KR+I V DS FH FE+G+CSCGDYW
Sbjct: 666 KRKITVRDSTRFHCFENGQCSCGDYW 691
Score = 196 bits (499), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 136/465 (29%), Positives = 223/465 (47%), Gaps = 37/465 (7%)
Query: 128 TFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAM 187
T+ +I+ C + + EGKKVH + G I + N L+ MY K G + A KVF+ M
Sbjct: 87 TYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEM 146
Query: 188 PLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLG--------------EKPDRLSMISS 233
P RDL SWN MVNGY +G ++ F EM ++P+ ++ S
Sbjct: 147 PNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYS 206
Query: 234 L------------------GGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKC 275
L + C+R GKEIH ++R GL+ D ++ +SL+DMY KC
Sbjct: 207 LMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKC 266
Query: 276 GKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLL 335
G +D A +F+++ K++V+W +MI Y + + E F+ + P+ T +L
Sbjct: 267 GCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVL 326
Query: 336 PSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMV 395
+C+ T GK +HGY R F P+ ++LVDMY KCG ++ A+ V + ++V
Sbjct: 327 NACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLV 386
Query: 396 SWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYI 455
SW ++I QNG+ +EAL+ F L KPD VT ++L A V + + I
Sbjct: 387 SWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSI 446
Query: 456 T-KLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFK-NLVSWNTMIMAYAIHGFGTI 513
T K LS + +V + A+ G + + M K + W +++ + +G I
Sbjct: 447 TEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCST--YGNI 504
Query: 514 SIQLFSRMKQNGIEP-NESTFVSLLSSCSISGLVNEGWELFNSMK 557
+ + + IEP N T+V++ + + +G E ++ M+
Sbjct: 505 DLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQ 549
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 101/382 (26%), Positives = 180/382 (47%), Gaps = 12/382 (3%)
Query: 43 TKKQMSETPKRGMIKPNSLSLTRSLCEFVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFS 102
+K E P R + N + + + + G ++ A LF++M + D+Y W ++ G+
Sbjct: 139 ARKVFDEMPNRDLCSWNVM-----VNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYV 193
Query: 103 NKGLFQEVIDFYHRMEYEGIGIDN-FTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDI 161
K +E + Y M+ N FT + A + GK++HG +++ GLD D
Sbjct: 194 KKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDE 253
Query: 162 YVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGL 221
+ +SL+DMY K G ++ A +F+ + +D+VSW M++ Y + F E++G
Sbjct: 254 VLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGS 313
Query: 222 GEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYA 281
E+P+ + L C+ GK++H + R G + +SL+DMY KCG ++ A
Sbjct: 314 CERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESA 373
Query: 282 ERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKF 341
+ V + ++V+W ++IGG A NG E+ + + PD +T +N+L +C+
Sbjct: 374 KHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHA 433
Query: 342 GTLLEGKCIHGYAIRKMFLPHLVLE-TALVDMYGKCGQLKFAECVFGRINEK-NMVSWNA 399
G + +G K L H T LVD+ + G+ + + V + K + W +
Sbjct: 434 GLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWAS 493
Query: 400 IIAAYVQNGR----NEEALELF 417
++ G E A ELF
Sbjct: 494 VLGGCSTYGNIDLAEEAAQELF 515
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 134/273 (49%), Gaps = 6/273 (2%)
Query: 74 GAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVI 133
G +D A +F+K+ + D W +I + ++E + + + +TF V+
Sbjct: 267 GCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVL 326
Query: 134 KACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLV 193
AC L + GK+VHG + ++G D + +SL+DMY K G +E A+ V + P DLV
Sbjct: 327 NACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLV 386
Query: 194 SWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQV 253
SW ++ G G ++L F +L G KPD ++ ++ L C+ V G E +
Sbjct: 387 SWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSI 446
Query: 254 I-RNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCK-NIVAWNAMIGGYAINGHF-- 309
++ L T L+D+ A+ G+ + + V +EM K + W +++GG + G+
Sbjct: 447 TEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDL 506
Query: 310 -LESFTCLKRMQEDNLIPDAITMINLLPSCSKF 341
E+ L +++ +N + +TM N+ + K+
Sbjct: 507 AEEAAQELFKIEPENPVT-YVTMANIYAAAGKW 538
>AT5G46460.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18840305-18842398 FORWARD
Length = 697
Score = 356 bits (913), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 214/627 (34%), Positives = 341/627 (54%), Gaps = 19/627 (3%)
Query: 180 AEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSI 239
A +F+ MP+RD+VSWN M++G GD ++ F EM P+R S++S +
Sbjct: 85 ALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEM------PER-SVVSWTA--MV 135
Query: 240 GCCVRGGKEIHCQVIRNGLEL-DIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNA 298
C R GK + + + + D S++ Y + GKVD A ++F +M KN+++W
Sbjct: 136 NGCFRSGKVDQAERLFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTT 195
Query: 299 MIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKM 358
MI G N E+ K M + + ++ +C+ G +HG I+
Sbjct: 196 MICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLG 255
Query: 359 FLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFH 418
FL + +L+ Y C ++ + VF + + W A+++ Y N ++E+AL +F
Sbjct: 256 FLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFS 315
Query: 419 CLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCG 478
+ ++ P+ T AS L + + L T+ K++H KL L ++ F N++V MY+ G
Sbjct: 316 GMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSG 375
Query: 479 DLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLS 538
++ A F + K++VSWN++I+ A HG G + +F +M + EP+E TF LLS
Sbjct: 376 NVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLS 435
Query: 539 SCSISGLVNEGWELFNSMKMDYN-IDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPT 597
+CS G + +G +LF M N ID I+HY CMVD+LGR G L A++ IE M + P
Sbjct: 436 ACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPN 495
Query: 598 ARIWGSLLTASRNNNDIFFAEFAAKHILSHDNDNTGCYVLLANMYAEAGRWEDVEQIKLV 657
+W +LL+A R ++D+ E AA I + D+ ++ YVLL+N+YA AGRW +V ++++
Sbjct: 496 EMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVLLSNIYASAGRWSNVSKLRVK 555
Query: 658 MKKKGLAKTVDCCTVESKGKSQKFINNNKSHQQAYMIYDVLDIILKKIGEDVYIHSLSKF 717
MKK G+ K V +GK +F + ++ H IY+ L+ + +K+ E Y +
Sbjct: 556 MKKNGIMKKPGSSWVVIRGKKHEFFSGDQPH--CSRIYEKLEFLREKLKELGYA---PDY 610
Query: 718 RPA--DV-IKKKMKSPQNHSVKLAICFGLISTAIGKPIIIRKNTRICKDCHIAAKKISRV 774
R A DV ++K + HS +LAI FGLI+T G + + KN R+C+DCH K IS V
Sbjct: 611 RSALHDVEDEQKEEMLWYHSERLAIAFGLINTVEGSAVTVMKNLRVCEDCHTVIKLISGV 670
Query: 775 TKREIIVGDSKIFHHFEDGRCSCGDYW 801
REI++ D FHHF++G CSCGDYW
Sbjct: 671 VGREIVLRDPIRFHHFKNGTCSCGDYW 697
Score = 166 bits (421), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 116/476 (24%), Positives = 221/476 (46%), Gaps = 20/476 (4%)
Query: 38 RKSNPTKKQMSETPKRGMIKPNSLSLTRSLCEFVDSGAMDNALYLFEKMNQPDTYIWNVI 97
R+ + ++ ++ P P+ T+ + + S + +AL LF++M D WN +
Sbjct: 49 RRIDEAREVFNQVPS-----PHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSM 103
Query: 98 IRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGL 157
I G G + + M + ++ ++ C R + +++ ++
Sbjct: 104 ISGCVECGDMNTAVKLFDEMPERSV----VSWTAMVNGCFRSGKVDQAERLFYQMPV--- 156
Query: 158 DRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKE 217
+D NS++ Y +FG V+ A K+F+ MP ++++SW M+ G ++L FK
Sbjct: 157 -KDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKN 215
Query: 218 MLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGK 277
ML K + C+ G ++H +I+ G + V SLI YA C +
Sbjct: 216 MLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKR 275
Query: 278 VDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPS 337
+ + +VF+E + + W A++ GY++N ++ + M ++++P+ T + L S
Sbjct: 276 IGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNS 335
Query: 338 CSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSW 397
CS GTL GK +HG A++ + +LV MY G + A VF +I +K++VSW
Sbjct: 336 CSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSW 395
Query: 398 NAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAY--- 454
N+II Q+GR + A +F + +PD +T +L A + + + +++ Y
Sbjct: 396 NSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSS 455
Query: 455 -ITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFK-NLVSWNTMIMAYAIH 508
I ++ +T +V + +CG L+ A + M K N + W ++ A +H
Sbjct: 456 GINHIDRKIQHYT--CMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMH 509
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 155/339 (45%), Gaps = 27/339 (7%)
Query: 277 KVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIP---------- 326
++D A VFN++ ++ + MI GY + +++ M +++
Sbjct: 50 RIDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVE 109
Query: 327 -----DAITMINLLPSCSKFG-TLLEGKCIHGYAI---RKMFLPHLVLETA----LVDMY 373
A+ + + +P S T + C + ++F V +TA +V Y
Sbjct: 110 CGDMNTAVKLFDEMPERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVKDTAAWNSMVHGY 169
Query: 374 GKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIA 433
+ G++ A +F ++ KN++SW +I QN R+ EAL+LF + +K +
Sbjct: 170 LQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFT 229
Query: 434 SILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFK 493
++ A A Q+H I KL + S +++ YA C + +R+ FD +
Sbjct: 230 CVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHE 289
Query: 494 NLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELF 553
+ W ++ Y+++ ++ +FS M +N I PN+STF S L+SCS G ++ G E+
Sbjct: 290 QVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMH 349
Query: 554 N-SMKMDYNIDYGIEHYGCMVDLLGRTGNL-DAAKQFIE 590
++K+ D + + +V + +GN+ DA FI+
Sbjct: 350 GVAVKLGLETDAFVGN--SLVVMYSDSGNVNDAVSVFIK 386
>AT4G04370.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:2134060-2136249 REVERSE
Length = 729
Score = 356 bits (913), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 195/616 (31%), Positives = 335/616 (54%), Gaps = 4/616 (0%)
Query: 74 GAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVI 133
G + +A +FE+M + D W +I +S G+ E + M ++GI T ++
Sbjct: 95 GLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVT---LL 151
Query: 134 KACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLV 193
+ +L + + +H + G D DI V NS++++Y K V A+ +F+ M RD+V
Sbjct: 152 EMLSGVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMV 211
Query: 194 SWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQV 253
SWN M++GY +G+ + L M G G +PD+ + +SL C + G+ +HCQ+
Sbjct: 212 SWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQI 271
Query: 254 IRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESF 313
++ G ++D+ ++T+LI MY KCGK + + RV + K++V W MI G G ++
Sbjct: 272 VKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKAL 331
Query: 314 TCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMY 373
M + + + +++ SC++ G+ G +HGY +R + +L+ MY
Sbjct: 332 IVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMY 391
Query: 374 GKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKP-DAVTI 432
KCG L + +F R+NE+++VSWNAII+ Y QN +AL LF ++ +T++ D+ T+
Sbjct: 392 AKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTV 451
Query: 433 ASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSF 492
S+L A + + K IH + + + + A+V MY+KCG L+ A+R FDS+S+
Sbjct: 452 VSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISW 511
Query: 493 KNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWEL 552
K++VSW +I Y HG G I+++++S +G+EPN F+++LSSCS +G+V +G ++
Sbjct: 512 KDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKI 571
Query: 553 FNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTASRNNN 612
F+SM D+ ++ EH C+VDLL R ++ A +F +E P+ + G +L A R N
Sbjct: 572 FSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYKENFTRPSIDVLGIILDACRANG 631
Query: 613 DIFFAEFAAKHILSHDNDNTGCYVLLANMYAEAGRWEDVEQIKLVMKKKGLAKTVDCCTV 672
+ + ++ + G YV L + +A RW+DV + M+ GL K +
Sbjct: 632 KTEVEDIICEDMIELKPGDAGHYVKLGHSFAAMKRWDDVSESWNQMRSLGLKKLPGWSKI 691
Query: 673 ESKGKSQKFINNNKSH 688
E GK+ F N+ SH
Sbjct: 692 EMNGKTTTFFMNHTSH 707
Score = 229 bits (583), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 156/522 (29%), Positives = 262/522 (50%), Gaps = 14/522 (2%)
Query: 91 TYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHG 150
T +N I S+ G ++V+ + M + D FTFP ++KAC L G +H
Sbjct: 11 TKYFNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQ 70
Query: 151 KLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLK 210
+++ G D Y+ +SL+++Y KFG + A KVFE M RD+V W M+ Y G +
Sbjct: 71 QVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGE 130
Query: 211 SLMCFKEMLGLGEKPDRLSMISSLGGC----SIGCCVRGGKEIHCQVIRNGLELDIMVQT 266
+ EM G KP ++++ L G + C +H + G + DI V
Sbjct: 131 ACSLVNEMRFQGIKPGPVTLLEMLSGVLEITQLQC-------LHDFAVIYGFDCDIAVMN 183
Query: 267 SLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIP 326
S++++Y KC V A+ +F++M +++V+WN MI GYA G+ E L RM+ D L P
Sbjct: 184 SMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRP 243
Query: 327 DAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVF 386
D T L L G+ +H ++ F + L+TAL+ MY KCG+ + + V
Sbjct: 244 DQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVL 303
Query: 387 GRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVS 446
I K++V W +I+ ++ GR E+AL +F + + IAS++ + A+L +
Sbjct: 304 ETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFD 363
Query: 447 ECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYA 506
+H Y+ + + +T N+++ MYAKCG L + F+ M+ ++LVSWN +I YA
Sbjct: 364 LGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYA 423
Query: 507 IHGFGTISIQLFSRMKQNGIEPNES-TFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYG 565
+ ++ LF MK ++ +S T VSLL +CS +G + G +L + + + I
Sbjct: 424 QNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVG-KLIHCIVIRSFIRPC 482
Query: 566 IEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTA 607
+VD+ + G L+AA++ + + WG L+
Sbjct: 483 SLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVS-WGILIAG 523
Score = 154 bits (388), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 88/288 (30%), Positives = 149/288 (51%), Gaps = 1/288 (0%)
Query: 70 FVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTF 129
++ G + + + E + D W V+I G G ++ + + M G + +
Sbjct: 290 YLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAI 349
Query: 130 PFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPL 189
V+ +C +L SF G VHG +++ G D NSLI MY K G ++ + +FE M
Sbjct: 350 ASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNE 409
Query: 190 RDLVSWNCMVNGYRVIGDGLKSLMCFKEM-LGLGEKPDRLSMISSLGGCSIGCCVRGGKE 248
RDLVSWN +++GY D K+L+ F+EM ++ D +++S L CS + GK
Sbjct: 410 RDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKL 469
Query: 249 IHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGH 308
IHC VIR+ + +V T+L+DMY+KCG ++ A+R F+ ++ K++V+W +I GY +G
Sbjct: 470 IHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGK 529
Query: 309 FLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIR 356
+ + P+ + + +L SCS G + +G I +R
Sbjct: 530 GDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVR 577
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 119/220 (54%), Gaps = 2/220 (0%)
Query: 70 FVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGI-GIDNFT 128
+ G +D +L +FE+MN+ D WN II G++ + + + M+++ + +D+FT
Sbjct: 391 YAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFT 450
Query: 129 FPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMP 188
+++AC + GK +H +I+ + V +L+DMY K G++E A++ F+++
Sbjct: 451 VVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSIS 510
Query: 189 LRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKE 248
+D+VSW ++ GY G G +L + E L G +P+ + ++ L CS V+ G +
Sbjct: 511 WKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLK 570
Query: 249 IHCQVIRN-GLELDIMVQTSLIDMYAKCGKVDYAERVFNE 287
I ++R+ G+E + ++D+ + +++ A + + E
Sbjct: 571 IFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYKE 610
>AT5G48910.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:19832969-19834909 REVERSE
Length = 646
Score = 355 bits (911), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 202/618 (32%), Positives = 332/618 (53%), Gaps = 66/618 (10%)
Query: 243 VRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCG----KVDYAERVFNEMTCKNIVAWNA 298
+R +IH I++G D + ++ A +DYA ++FN+M +N +WN
Sbjct: 36 IRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNT 95
Query: 299 MIGGYAINGH--FLESFTCLKRMQEDNLI-PDAITMINLLPSCSKFGTLLEGKCIHGYAI 355
+I G++ + L + T M D + P+ T ++L +C+K G + EGK IHG A+
Sbjct: 96 IIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLAL 155
Query: 356 R--------------KMFL-------------------------------PHLVLETALV 370
+ +M++ +VL ++
Sbjct: 156 KYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMI 215
Query: 371 DMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAV 430
D Y + G K A +F ++ ++++VSWN +I+ Y NG ++A+E+F ++ ++P+ V
Sbjct: 216 DGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYV 275
Query: 431 TIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSM 490
T+ S+LPA + L ++ + +H Y + + +A++ MY+KCG ++ A F+ +
Sbjct: 276 TLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERL 335
Query: 491 SFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGW 550
+N+++W+ MI +AIHG +I F +M+Q G+ P++ +++LL++CS GLV EG
Sbjct: 336 PRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGR 395
Query: 551 ELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTASRN 610
F+ M ++ IEHYGCMVDLLGR+G LD A++FI MP+ P IW +LL A R
Sbjct: 396 RYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRM 455
Query: 611 NNDIFFAEFAAKHILSHDNDNTGCYVLLANMYAEAGRWEDVEQIKLVMKKKGLAKTVDCC 670
++ + A ++ ++G YV L+NMYA G W +V +++L MK+K + K C
Sbjct: 456 QGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGCS 515
Query: 671 TVESKGKSQKFINNNKSHQQAYMIYDVLDIILKKIGEDVYIHSLSKFRPAD---VIKKKM 727
++ G +F+ + SH +A I +L I K+ L+ +RP ++ +
Sbjct: 516 LIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKL-------RLAGYRPITTQVLLNLEE 568
Query: 728 KSPQN----HSVKLAICFGLISTAIGKPIIIRKNTRICKDCHIAAKKISRVTKREIIVGD 783
+ +N HS K+A FGLIST+ GKPI I KN RIC+DCH + K IS+V KR+I V D
Sbjct: 569 EDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKITVRD 628
Query: 784 SKIFHHFEDGRCSCGDYW 801
K FHHF+DG CSC DYW
Sbjct: 629 RKRFHHFQDGSCSCMDYW 646
Score = 165 bits (418), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 116/426 (27%), Positives = 199/426 (46%), Gaps = 51/426 (11%)
Query: 76 MDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVID---FYHRMEYEGIGIDNFTFPFV 132
+D A +F +M Q + + WN IIRGFS + +I FY M E + + FTFP V
Sbjct: 75 LDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSV 134
Query: 133 IKACGRLLSFIEGKKVHGKLIKIGL----------------------------------- 157
+KAC + EGK++HG +K G
Sbjct: 135 LKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKD 194
Query: 158 ----------DRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGD 207
D +I + N +ID Y + G + A +F+ M R +VSWN M++GY + G
Sbjct: 195 MVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGF 254
Query: 208 GLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTS 267
++ F+EM +P+ ++++S L S + G+ +H +G+ +D ++ ++
Sbjct: 255 FKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSA 314
Query: 268 LIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPD 327
LIDMY+KCG ++ A VF + +N++ W+AMI G+AI+G ++ C +M++ + P
Sbjct: 315 LIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPS 374
Query: 328 AITMINLLPSCSKFGTLLEGKCIHGYAIRKMFL-PHLVLETALVDMYGKCGQLKFA-ECV 385
+ INLL +CS G + EG+ + L P + +VD+ G+ G L A E +
Sbjct: 375 DVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFI 434
Query: 386 FGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATV 445
+ + V W A++ A G E + + L + + D+ ++ YA
Sbjct: 435 LNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDM-VPHDSGAYVALSNMYASQGNW 493
Query: 446 SECKQI 451
SE ++
Sbjct: 494 SEVSEM 499
>AT3G02330.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:473881-476592 REVERSE
Length = 861
Score = 353 bits (905), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 211/650 (32%), Positives = 338/650 (52%), Gaps = 26/650 (4%)
Query: 79 ALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGR 138
+L +F+ + + ++ W+ II G L + F+ M+ G+ + V+++C
Sbjct: 192 SLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAA 251
Query: 139 LLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCM 198
L G ++H +K D V + +DMY K ++ A+ +F+ + S+N M
Sbjct: 252 LSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAM 311
Query: 199 VNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGL 258
+ GY G K+L+ F ++ G D +S+ C++ + G +I+ I++ L
Sbjct: 312 ITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSL 371
Query: 259 ELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKR 318
LD+ V + IDMY KC + A RVF+EM ++ V+WNA+I + NG E+
Sbjct: 372 SLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVS 431
Query: 319 MQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQ 378
M + PD T ++L +C+ G+L G IH ++ + + +L+DMY KCG
Sbjct: 432 MLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGM 490
Query: 379 LKFAECV----FGRIN----------------EKNMVSWNAIIAAYVQNGRNEEALELFH 418
++ AE + F R N ++ VSWN+II+ YV ++E+A LF
Sbjct: 491 IEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFT 550
Query: 419 CLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCG 478
+ + PD T A++L A LA+ KQIHA + K EL S+ + + +V MY+KCG
Sbjct: 551 RMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCG 610
Query: 479 DLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLS 538
DL +R F+ ++ V+WN MI YA HG G +IQLF RM I+PN TF+S+L
Sbjct: 611 DLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILR 670
Query: 539 SCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTA 598
+C+ GL+++G E F MK DY +D + HY MVD+LG++G + A + I EMP
Sbjct: 671 ACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADD 730
Query: 599 RIWGSLL---TASRNNNDIFFAEFAAKHILSHDNDNTGCYVLLANMYAEAGRWEDVEQIK 655
IW +LL T RNN ++ AE A +L D ++ Y LL+N+YA+AG WE V ++
Sbjct: 731 VIWRTLLGVCTIHRNNVEV--AEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLR 788
Query: 656 LVMKKKGLAKTVDCCTVESKGKSQKFINNNKSHQQAYMIYDVLDIILKKI 705
M+ L K C VE K + F+ +K+H + IY+ L +I ++
Sbjct: 789 RNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHPRWEEIYEELGLIYSEM 838
Score = 231 bits (589), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 153/495 (30%), Positives = 252/495 (50%), Gaps = 27/495 (5%)
Query: 70 FVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTF 129
+ S M A F M D WN ++ G+ G + I+ + M EGI D TF
Sbjct: 82 YSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTF 141
Query: 130 PFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFG-FVEVAEKVFEAMP 188
++K C L G ++HG ++++G D D+ ++L+DMY K FVE + +VF+ +P
Sbjct: 142 AIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVE-SLRVFQGIP 200
Query: 189 LRDLVSWNCMVNGYRVIGDGLKSLMC--FKEMLGLGEKPDRLSMISSLGGCSIGCCVRGG 246
++ VSW+ ++ G + + L SL FKEM + + S L C+ +R G
Sbjct: 201 EKNSVSWSAIIAG--CVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLG 258
Query: 247 KEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAIN 306
++H +++ D +V+T+ +DMYAKC + A+ +F+ N ++NAMI GY+
Sbjct: 259 GQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQE 318
Query: 307 GHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLE 366
H ++ R+ L D I++ + +C+ L EG I+G AI+ + +
Sbjct: 319 EHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVA 378
Query: 367 TALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLK 426
A +DMYGKC L A VF + ++ VSWNAIIAA+ QNG+ E L LF + ++
Sbjct: 379 NAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIE 438
Query: 427 PDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTAR-- 484
PD T SIL A ++ +IH+ I K ++SN+ +++ MY+KCG ++ A
Sbjct: 439 PDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKI 497
Query: 485 --RYF------------DSMSFKNL----VSWNTMIMAYAIHGFGTISIQLFSRMKQNGI 526
R+F + M K L VSWN++I Y + + LF+RM + GI
Sbjct: 498 HSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGI 557
Query: 527 EPNESTFVSLLSSCS 541
P++ T+ ++L +C+
Sbjct: 558 TPDKFTYATVLDTCA 572
Score = 214 bits (545), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 143/499 (28%), Positives = 245/499 (49%), Gaps = 26/499 (5%)
Query: 64 TRSLCEFVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIG 123
T +L + M +A LF+ + +N +I G+S + + + +HR+ G+G
Sbjct: 278 TATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLG 337
Query: 124 IDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKV 183
D + V +AC + EG +++G IK L D+ V N+ IDMY K + A +V
Sbjct: 338 FDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRV 397
Query: 184 FEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCV 243
F+ M RD VSWN ++ + G G ++L F ML +PD + S L C+ G +
Sbjct: 398 FDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACT-GGSL 456
Query: 244 RGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERV----------------FNE 287
G EIH ++++G+ + V SLIDMY+KCG ++ AE++ +
Sbjct: 457 GYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEK 516
Query: 288 MTCKNI----VAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGT 343
M K + V+WN++I GY + ++ RM E + PD T +L +C+ +
Sbjct: 517 MHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLAS 576
Query: 344 LLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAA 403
GK IH I+K + + + LVDMY KCG L + +F + ++ V+WNA+I
Sbjct: 577 AGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICG 636
Query: 404 YVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLE--LS 461
Y +G+ EEA++LF + + +KP+ VT SIL A A + + + + + Y+ K + L
Sbjct: 637 YAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLE-YFYMMKRDYGLD 695
Query: 462 SNTFTSNAIVYMYAKCGDLQTARRYFDSMSFK-NLVSWNTMIMAYAIHGFGTISIQLFSR 520
+ +V + K G ++ A M F+ + V W T++ IH + + +
Sbjct: 696 PQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHR-NNVEVAEEAT 754
Query: 521 MKQNGIEPNESTFVSLLSS 539
++P +S+ +LLS+
Sbjct: 755 AALLRLDPQDSSAYTLLSN 773
Score = 212 bits (540), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 141/433 (32%), Positives = 226/433 (52%), Gaps = 10/433 (2%)
Query: 159 RDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEM 218
RD+ N +I+ Y K + A F MP+RD+VSWN M++GY G+ LKS+ F +M
Sbjct: 70 RDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDM 129
Query: 219 LGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKV 278
G + D + L CS G +IH V+R G + D++ ++L+DMYAK +
Sbjct: 130 GREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRF 189
Query: 279 DYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSC 338
+ RVF + KN V+W+A+I G N + K MQ+ N ++L SC
Sbjct: 190 VESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSC 249
Query: 339 SKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWN 398
+ L G +H +A++ F ++ TA +DMY KC ++ A+ +F N S+N
Sbjct: 250 AALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYN 309
Query: 399 AIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKL 458
A+I Y Q +AL LFH L + L D ++++ + A A + +SE QI+ K
Sbjct: 310 AMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKS 369
Query: 459 ELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLF 518
LS + +NA + MY KC L A R FD M ++ VSWN +I A+ +G G ++ LF
Sbjct: 370 SLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLF 429
Query: 519 SRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGI---EHYGC-MVD 574
M ++ IEP+E TF S+L +C+ G + G E+ +S+ + G+ GC ++D
Sbjct: 430 VSMLRSRIEPDEFTFGSILKACT-GGSLGYGMEIHSSI-----VKSGMASNSSVGCSLID 483
Query: 575 LLGRTGNLDAAKQ 587
+ + G ++ A++
Sbjct: 484 MYSKCGMIEEAEK 496
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 126/253 (49%), Gaps = 2/253 (0%)
Query: 51 PKRGMIKPNSLSLTRSLCEFVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEV 110
K GMI+ +R SG M+ + K Q WN II G+ K ++
Sbjct: 486 SKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDA 545
Query: 111 IDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDM 170
+ RM GI D FT+ V+ C L S GK++H ++IK L D+Y+C++L+DM
Sbjct: 546 QMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDM 605
Query: 171 YFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSM 230
Y K G + + +FE RD V+WN M+ GY G G +++ F+ M+ KP+ ++
Sbjct: 606 YSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTF 665
Query: 231 ISSLGGCSIGCCVRGGKEIHCQVIRN-GLELDIMVQTSLIDMYAKCGKVDYAERVFNEMT 289
IS L C+ + G E + R+ GL+ + ++++D+ K GKV A + EM
Sbjct: 666 ISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMP 725
Query: 290 CK-NIVAWNAMIG 301
+ + V W ++G
Sbjct: 726 FEADDVIWRTLLG 738
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 119/231 (51%), Gaps = 3/231 (1%)
Query: 357 KMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALEL 416
KM L +V +++ Y K + A F + +++VSWN++++ Y+QNG + +++E+
Sbjct: 66 KMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEV 125
Query: 417 FHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAK 476
F + + ++ D T A IL + L S QIH + ++ ++ ++A++ MYAK
Sbjct: 126 FVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAK 185
Query: 477 CGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSL 536
+ R F + KN VSW+ +I + +++++ F M++ ++S + S+
Sbjct: 186 GKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASV 245
Query: 537 LSSCSISGLVNEGWELF-NSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAK 586
L SC+ + G +L +++K D+ D GI + D+ + N+ A+
Sbjct: 246 LRSCAALSELRLGGQLHAHALKSDFAAD-GIVRTATL-DMYAKCDNMQDAQ 294
>AT1G69350.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:26069882-26072245 FORWARD
Length = 787
Score = 350 bits (898), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 205/649 (31%), Positives = 353/649 (54%), Gaps = 8/649 (1%)
Query: 53 RGMIKPNSLSLTRSLCEFVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVID 112
+G + +++ T LC + +G + +A +F+ M D W+ ++ G + +
Sbjct: 129 KGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALR 188
Query: 113 FYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYF 172
+ M +G+ D T V++ C L + VHG++ + D D +CNSL+ MY
Sbjct: 189 MFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYS 248
Query: 173 KFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMIS 232
K G + +E++FE + ++ VSW M++ Y K+L F EM+ G +P+ +++ S
Sbjct: 249 KCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYS 308
Query: 233 SLGGCSIGCCVRGGKEIHCQVIRNGLELDI-MVQTSLIDMYAKCGKVDYAERVFNEMTCK 291
L C + +R GK +H +R L+ + + +L+++YA+CGK+ E V ++ +
Sbjct: 309 VLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDR 368
Query: 292 NIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIH 351
NIVAWN++I YA G +++ ++M + PDA T+ + + +C G + GK IH
Sbjct: 369 NIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIH 428
Query: 352 GYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNE 411
G+ IR V + +L+DMY K G + A VF +I +++V+WN+++ + QNG +
Sbjct: 429 GHVIRTDVSDEFV-QNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSV 487
Query: 412 EALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSS--NTFTSNA 469
EA+ LF + + L+ + VT +++ A + + ++ + K +H KL +S + FT A
Sbjct: 488 EAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHH---KLIISGLKDLFTDTA 544
Query: 470 IVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPN 529
++ MYAKCGDL A F +MS +++VSW++MI AY +HG +I F++M ++G +PN
Sbjct: 545 LIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPN 604
Query: 530 ESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFI 589
E F+++LS+C SG V EG FN MK + + EH+ C +DLL R+G+L A + I
Sbjct: 605 EVVFMNVLSACGHSGSVEEGKYYFNLMK-SFGVSPNSEHFACFIDLLSRSGDLKEAYRTI 663
Query: 590 EEMPLVPTARIWGSLLTASRNNNDIFFAEFAAKHILSHDNDNTGCYVLLANMYAEAGRWE 649
+EMP + A +WGSL+ R + + + + D+TG Y LL+N+YAE G WE
Sbjct: 664 KEMPFLADASVWGSLVNGCRIHQKMDIIKAIKNDLSDIVTDDTGYYTLLSNIYAEEGEWE 723
Query: 650 DVEQIKLVMKKKGLAKTVDCCTVESKGKSQKFINNNKSHQQAYMIYDVL 698
+ +++ MK L K +E K +F ++ Q IY L
Sbjct: 724 EFRRLRSAMKSSNLKKVPGYSAIEIDQKVFRFGAGEENRIQTDEIYRFL 772
Score = 326 bits (836), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 184/546 (33%), Positives = 313/546 (57%), Gaps = 15/546 (2%)
Query: 54 GMIKPNSLSLTRSLCEFVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDF 113
G ++ + L +T+ + + G+ D++ +FE PD++++ V+I+ L ID
Sbjct: 28 GRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIKCNVWCHLLDAAIDL 87
Query: 114 YHRMEYEGIGIDNFTFPFVIKAC-GRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYF 172
YHR+ E I F FP V++AC G G KVHG++IK G+D D + SL+ MY
Sbjct: 88 YHRLVSETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYG 147
Query: 173 KFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMIS 232
+ G + AEKVF+ MP+RDLV+W+ +V+ G+ +K+L FK M+ G +PD ++MIS
Sbjct: 148 QTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMIS 207
Query: 233 SLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKN 292
+ GC+ C+R + +H Q+ R +LD + SL+ MY+KCG + +ER+F ++ KN
Sbjct: 208 VVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKN 267
Query: 293 IVAWNAMIGGYAINGHFLE-SFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIH 351
V+W AMI Y G F E + M + + P+ +T+ ++L SC G + EGK +H
Sbjct: 268 AVSWTAMISSYN-RGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVH 326
Query: 352 GYAIRKMFLPHL-VLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRN 410
G+A+R+ P+ L ALV++Y +CG+L E V ++++N+V+WN++I+ Y G
Sbjct: 327 GFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMV 386
Query: 411 EEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAI 470
+AL LF + Q +KPDA T+AS + A V KQIH ++ + ++ S+ F N++
Sbjct: 387 IQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDV-SDEFVQNSL 445
Query: 471 VYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNE 530
+ MY+K G + +A F+ + +++V+WN+M+ ++ +G +I LF M + +E NE
Sbjct: 446 IDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNE 505
Query: 531 STFVSLLSSCSISGLVNEG-W---ELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAK 586
TF++++ +CS G + +G W +L S D D ++D+ + G+L+AA+
Sbjct: 506 VTFLAVIQACSSIGSLEKGKWVHHKLIISGLKDLFTDTA------LIDMYAKCGDLNAAE 559
Query: 587 QFIEEM 592
M
Sbjct: 560 TVFRAM 565
>AT5G52850.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:21414935-21417616 REVERSE
Length = 893
Score = 349 bits (896), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 214/734 (29%), Positives = 368/734 (50%), Gaps = 31/734 (4%)
Query: 74 GAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVI 133
G A LF + DT W ++I ++E + FY M G+ + FTF ++
Sbjct: 173 GQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLL 232
Query: 134 KACGRL-LSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDL 192
A L L F GK +H +I G+ ++ + SL+D Y +F +E A +V + +D+
Sbjct: 233 GASSFLGLEF--GKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDV 290
Query: 193 VSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQ 252
W +V+G+ +++ F EM LG +P+ + + L CS + GK+IH Q
Sbjct: 291 FLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQ 350
Query: 253 VIRNGLELDIMVQTSLIDMYAKCGKVDY-AERVFNEMTCKNIVAWNAMIGGYAINGHFLE 311
I+ G E V +L+DMY KC + A RVF M N+V+W +I G +G +
Sbjct: 351 TIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQD 410
Query: 312 SFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVD 371
F L M + + P+ +T+ +L +CSK + IH Y +R+ +V+ +LVD
Sbjct: 411 CFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVD 470
Query: 372 MYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVT 431
Y ++ +A V + ++ +++ +++ + + G++E AL + + + ++ D ++
Sbjct: 471 AYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLS 530
Query: 432 IASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMS 491
+ + A A L + K +H Y K S N++V MY+KCG L+ A++ F+ ++
Sbjct: 531 LPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIA 590
Query: 492 FKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWE 551
++VSWN ++ A +GF + ++ F M+ EP+ TF+ LLS+CS L + G E
Sbjct: 591 TPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLE 650
Query: 552 LFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTASRNN 611
F MK YNI+ +EHY +V +LGR G L+ A +E M L P A I+ +LL A R
Sbjct: 651 YFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKTLLRACRYR 710
Query: 612 NDIFFAEFAAKHILSHDNDNTGCYVLLANMYAEAGRWEDVEQIKLVMKKKGLAKTVDCCT 671
++ E A L+ + Y+LLA++Y E+G+ E ++ + +M +K L+K + T
Sbjct: 711 GNLSLGEDMANKGLALAPSDPALYILLADLYDESGKPELAQKTRNLMTEKRLSKKLGKST 770
Query: 672 VESKGKSQKFINNNKSH-QQAYMIYDVLDIILKKIGEDVYIHSLSKFRPADVIKKKMKSP 730
VE +GK F++ + + + IY ++ I ++I K+ SP
Sbjct: 771 VEVQGKVHSFVSEDVTRVDKTNGIYAEIESIKEEI-------------------KRFGSP 811
Query: 731 QN-------HSVKLAICFGLISTAIGKPIIIRKNTRICKDCHIAAKKISRVTKREIIVGD 783
HS K A+ +G I + P+ + KN +CKDCH ++R+ ++I V D
Sbjct: 812 YRGNENASFHSAKQAVVYGFIYASPEAPVHVVKNKILCKDCHEFVSILTRLVDKKITVRD 871
Query: 784 SKIFHHFEDGRCSC 797
H F++G CSC
Sbjct: 872 GNQVHIFKNGECSC 885
Score = 217 bits (553), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 149/587 (25%), Positives = 279/587 (47%), Gaps = 6/587 (1%)
Query: 67 LCEFVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDN 126
L ++ + + NA LF++M+ + W V+I F+ F + + M G +
Sbjct: 65 LSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNE 124
Query: 127 FTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEA 186
FTF V+++C L G +VHG +IK G + + V +SL D+Y K G + A ++F +
Sbjct: 125 FTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSS 184
Query: 187 MPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGG 246
+ D +SW M++ ++L + EM+ G P+ + + LG S + G
Sbjct: 185 LQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSF-LGLEFG 243
Query: 247 KEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAIN 306
K IH +I G+ L+++++TSL+D Y++ K++ A RV N +++ W +++ G+ N
Sbjct: 244 KTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRN 303
Query: 307 GHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLE 366
E+ M+ L P+ T +L CS +L GK IH I+ F +
Sbjct: 304 LRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVG 363
Query: 367 TALVDMYGKCGQLKF-AECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTL 425
ALVDMY KC + A VFG + N+VSW +I V +G ++ L + + +
Sbjct: 364 NALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREV 423
Query: 426 KPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARR 485
+P+ VT++ +L A ++L V +IHAY+ + + N++V YA + A
Sbjct: 424 EPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWN 483
Query: 486 YFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGL 545
SM ++ +++ +++ + G +++ + + M +GI ++ + +S+ + G
Sbjct: 484 VIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGA 543
Query: 546 VNEGWELF-NSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSL 604
+ G L S+K ++ + +VD+ + G+L+ AK+ EE+ P W L
Sbjct: 544 LETGKHLHCYSVKSGFSGAASV--LNSLVDMYSKCGSLEDAKKVFEEIA-TPDVVSWNGL 600
Query: 605 LTASRNNNDIFFAEFAAKHILSHDNDNTGCYVLLANMYAEAGRWEDV 651
++ +N I A A + + + + L+ GR D+
Sbjct: 601 VSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDL 647
Score = 204 bits (519), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 124/415 (29%), Positives = 215/415 (51%), Gaps = 8/415 (1%)
Query: 134 KACGRLLSFIE------GKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAM 187
K+C R+LSF E G +H +IK GL ++ +CN+L+ +Y K + A K+F+ M
Sbjct: 25 KSCIRILSFCESNSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEM 84
Query: 188 PLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGK 247
R + +W M++ + + +L F+EM+ G P+ + S + C+ + G
Sbjct: 85 SHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGG 144
Query: 248 EIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAING 307
+H VI+ G E + +V +SL D+Y+KCG+ A +F+ + + ++W MI
Sbjct: 145 RVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGAR 204
Query: 308 HFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLET 367
+ E+ M + + P+ T + LL + S G L GK IH I + ++VL+T
Sbjct: 205 KWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLG-LEFGKTIHSNIIVRGIPLNVVLKT 263
Query: 368 ALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKP 427
+LVD Y + +++ A V E+++ W ++++ +V+N R +EA+ F +R+ L+P
Sbjct: 264 SLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQP 323
Query: 428 DAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQT-ARRY 486
+ T ++IL + + ++ KQIH+ K+ +T NA+V MY KC + A R
Sbjct: 324 NNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRV 383
Query: 487 FDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCS 541
F +M N+VSW T+I+ HGF L M + +EPN T +L +CS
Sbjct: 384 FGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACS 438
Score = 125 bits (315), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 151/334 (45%), Gaps = 34/334 (10%)
Query: 54 GMIKPNSLSLTRSLCEFVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDF 113
M+ PN +S W +I G + G Q+
Sbjct: 386 AMVSPNVVS-------------------------------WTTLILGLVDHGFVQDCFGL 414
Query: 114 YHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFK 173
M + + T V++AC +L ++H L++ +D ++ V NSL+D Y
Sbjct: 415 LMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYAS 474
Query: 174 FGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISS 233
V+ A V +M RD +++ +V + +G +L M G G + D+LS+
Sbjct: 475 SRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGF 534
Query: 234 LGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNI 293
+ + + GK +HC +++G V SL+DMY+KCG ++ A++VF E+ ++
Sbjct: 535 ISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDV 594
Query: 294 VAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGY 353
V+WN ++ G A NG + + + M+ PD++T + LL +CS G L + +
Sbjct: 595 VSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSN-GRLTDLGLEYFQ 653
Query: 354 AIRKMF--LPHLVLETALVDMYGKCGQLKFAECV 385
++K++ P + LV + G+ G+L+ A V
Sbjct: 654 VMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGV 687
>AT4G32430.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:15652982-15655273 FORWARD
Length = 763
Score = 349 bits (895), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 198/637 (31%), Positives = 353/637 (55%), Gaps = 17/637 (2%)
Query: 73 SGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFV 132
+G DNAL +FE + PD WN I+ GF + Q ++F RM+ G+ D FT+
Sbjct: 124 AGRFDNALCIFENLVDPDVVSWNTILSGFDDN---QIALNFVVRMKSAGVVFDAFTYSTA 180
Query: 133 IKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDL 192
+ C F+ G ++ ++K GL+ D+ V NS I MY + G A +VF+ M +D+
Sbjct: 181 LSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDM 240
Query: 193 VSWNCMVNGYRVIGD-GLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHC 251
+SWN +++G G G ++++ F++M+ G + D +S S + C ++ ++IH
Sbjct: 241 ISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHG 300
Query: 252 QVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLE 311
I+ G E + V L+ Y+KCG ++ + VF++M+ +N+V+W MI + + +
Sbjct: 301 LCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMI-----SSNKDD 355
Query: 312 SFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVD 371
+ + M+ D + P+ +T + L+ + + EG IHG I+ F+ + + +
Sbjct: 356 AVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFIT 415
Query: 372 MYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVT 431
+Y K L+ A+ F I + ++SWNA+I+ + QNG + EAL++F +T+ P+ T
Sbjct: 416 LYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAETM-PNEYT 474
Query: 432 IASILPA--YAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDS 489
S+L A +AE +V + ++ HA++ KL L+S S+A++ MYAK G++ + + F+
Sbjct: 475 FGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNE 534
Query: 490 MSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEG 549
MS KN W ++I AY+ HG + LF +M + + P+ TF+S+L++C+ G+V++G
Sbjct: 535 MSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKG 594
Query: 550 WELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTASR 609
+E+FN M YN++ EHY CMVD+LGR G L A++ + E+P P + S+L + R
Sbjct: 595 YEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCR 654
Query: 610 NNNDIFFAEFAAKHILSHDNDNTGCYVLLANMYAEAGRWEDVEQIKLVMKKKGLAKT--- 666
+ ++ A+ + + +G YV + N+YAE W+ +I+ M+KK ++K
Sbjct: 655 LHGNVKMGAKVAELAMEMKPELSGSYVQMYNIYAEKEEWDKAAEIRKAMRKKNVSKEAGF 714
Query: 667 --VDCCTVESKGKSQKFINNNKSHQQAYMIYDVLDII 701
+D E Q F + +KSH ++ IY +++II
Sbjct: 715 SWIDVGDTEGSLTMQGFSSGDKSHPKSDEIYRMVEII 751
Score = 192 bits (487), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 132/502 (26%), Positives = 252/502 (50%), Gaps = 18/502 (3%)
Query: 116 RMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFG 175
++ Y G +D T +KAC L G ++HG G + V N+++ MY K G
Sbjct: 68 QLGYFGRHMDEVTLCLALKACRGDLK--RGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAG 125
Query: 176 FVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLG 235
+ A +FE + D+VSWN +++G+ D +L M G D + ++L
Sbjct: 126 RFDNALCIFENLVDPDVVSWNTILSGF---DDNQIALNFVVRMKSAGVVFDAFTYSTALS 182
Query: 236 GCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVA 295
C G ++ V++ GLE D++V S I MY++ G A RVF+EM+ K++++
Sbjct: 183 FCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMIS 242
Query: 296 WNAMIGGYAINGHF-LESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYA 354
WN+++ G + G F E+ + M + + D ++ +++ +C L + IHG
Sbjct: 243 WNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLC 302
Query: 355 IRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEAL 414
I++ + L + L+ Y KCG L+ + VF +++E+N+VSW +I++ ++A+
Sbjct: 303 IKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISS-----NKDDAV 357
Query: 415 ELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMY 474
+F +R + P+ VT ++ A + E +IH K S N+ + +Y
Sbjct: 358 SIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLY 417
Query: 475 AKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFV 534
AK L+ A++ F+ ++F+ ++SWN MI +A +GF ++++F + PNE TF
Sbjct: 418 AKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAETM-PNEYTFG 476
Query: 535 SLLSSCSISG--LVNEGWELF-NSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEE 591
S+L++ + + V +G + +K+ N + ++D+ + GN+D +++ E
Sbjct: 477 SVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVS--SALLDMYAKRGNIDESEKVFNE 534
Query: 592 MPLVPTARIWGSLLTASRNNND 613
M +W S+++A ++ D
Sbjct: 535 MSQ-KNQFVWTSIISAYSSHGD 555
Score = 132 bits (332), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 97/379 (25%), Positives = 178/379 (46%), Gaps = 15/379 (3%)
Query: 179 VAEKVFEAMPLRD-LVSWNCMVNGYRVIGDGLKSLMCFKEMLGLG---EKPDRLSMISSL 234
+A K+F+ R+ S N ++ ++L FKE L LG D +++ +L
Sbjct: 26 IAHKLFDGSSQRNATTSINHSISESLRRNSPARALSIFKENLQLGYFGRHMDEVTLCLAL 85
Query: 235 GGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIV 294
C ++ G +IH +G + V +++ MY K G+ D A +F + ++V
Sbjct: 86 KACRGD--LKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVV 143
Query: 295 AWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYA 354
+WN ++ G+ N L + RM+ ++ DA T L C L G +
Sbjct: 144 SWNTILSGFDDNQIAL---NFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTV 200
Query: 355 IRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGR-NEEA 413
++ LV+ + + MY + G + A VF ++ K+M+SWN++++ Q G EA
Sbjct: 201 VKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEA 260
Query: 414 LELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYM 473
+ +F + + ++ D V+ S++ + +QIH K S N ++
Sbjct: 261 VVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSR 320
Query: 474 YAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTF 533
Y+KCG L+ + F MS +N+VSW TMI + ++ +F M+ +G+ PNE TF
Sbjct: 321 YSKCGVLEAVKSVFHQMSERNVVSWTTMISSNK-----DDAVSIFLNMRFDGVYPNEVTF 375
Query: 534 VSLLSSCSISGLVNEGWEL 552
V L+++ + + EG ++
Sbjct: 376 VGLINAVKCNEQIKEGLKI 394
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 65/122 (53%), Gaps = 5/122 (4%)
Query: 70 FVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTF 129
+ G +D + +F +M+Q + ++W II +S+ G F+ V++ +H+M E + D TF
Sbjct: 519 YAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTF 578
Query: 130 PFVIKACGRLLSFIEGKKVHGKLIKI---GLDRDIYVCNSLIDMYFKFGFVEVAEKVFEA 186
V+ AC R +G ++ +I++ + Y C ++DM + G ++ AE++
Sbjct: 579 LSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSC--MVDMLGRAGRLKEAEELMSE 636
Query: 187 MP 188
+P
Sbjct: 637 VP 638
>AT5G50390.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:20520789-20522980 REVERSE
Length = 701
Score = 348 bits (894), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 187/563 (33%), Positives = 314/563 (55%), Gaps = 4/563 (0%)
Query: 243 VRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGG 302
+R K ++ ++ NG E + + ++ M+ KCG + A R+F+E+ +N+ ++ ++I G
Sbjct: 139 IRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISG 198
Query: 303 YAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPH 362
+ G+++E+F K M E+ + T +L + + G++ GK +H A++ + +
Sbjct: 199 FVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDN 258
Query: 363 LVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRN 422
+ L+DMY KCG ++ A C F + EK V+WN +IA Y +G +EEAL L + +R+
Sbjct: 259 TFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRD 318
Query: 423 QTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQT 482
+ D T++ ++ +LA + KQ HA + + S + A+V Y+K G + T
Sbjct: 319 SGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDT 378
Query: 483 ARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSI 542
AR FD + KN++SWN ++ YA HG GT +++LF +M + PN TF+++LS+C+
Sbjct: 379 ARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAY 438
Query: 543 SGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWG 602
SGL +GWE+F SM + I HY CM++LLGR G LD A FI PL T +W
Sbjct: 439 SGLSEQGWEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWA 498
Query: 603 SLLTASRNNNDIFFAEFAAKHILSHDNDNTGCYVLLANMYAEAGRWEDVEQIKLVMKKKG 662
+LL A R ++ A+ + + G YV++ NMY G+ + + ++ KG
Sbjct: 499 ALLNACRMQENLELGRVVAEKLYGMGPEKLGNYVVMYNMYNSMGKTAEAAGVLETLESKG 558
Query: 663 LAKTVDCCTVESKGKSQKFINNNK--SHQQAY--MIYDVLDIILKKIGEDVYIHSLSKFR 718
L+ C VE ++ F++ ++ S+ + IY +D ++++I E Y
Sbjct: 559 LSMMPACTWVEVGDQTHSFLSGDRFDSYNETVKRQIYQKVDELMEEISEYGYSEEEQHLL 618
Query: 719 PADVIKKKMKSPQNHSVKLAICFGLISTAIGKPIIIRKNTRICKDCHIAAKKISRVTKRE 778
P K++ + + HS KLAI +GL++T P+ I +N RICK+CH + IS VT RE
Sbjct: 619 PDVDEKEEERVGRYHSEKLAIAYGLVNTPEWNPLQITQNHRICKNCHKVVEFISLVTGRE 678
Query: 779 IIVGDSKIFHHFEDGRCSCGDYW 801
++V D+ FHHF++G+CSCG YW
Sbjct: 679 MVVRDASRFHHFKEGKCSCGGYW 701
Score = 162 bits (411), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 121/406 (29%), Positives = 201/406 (49%), Gaps = 20/406 (4%)
Query: 20 SFKQMGAPKRDLLVNPRIR-KSNPTKKQMSETPKRGMIKPNSLSLTRSLCEFVDSGAMDN 78
SFK +G D LV IR KS K++ +P + R L V G + +
Sbjct: 118 SFK-VGVSTYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIID 176
Query: 79 ALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGR 138
A LF+++ + + Y + II GF N G + E + + M E + TF +++A
Sbjct: 177 ARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAG 236
Query: 139 LLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCM 198
L S GK++H +K+G+ + +V LIDMY K G +E A FE MP + V+WN +
Sbjct: 237 LGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNV 296
Query: 199 VNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGL 258
+ GY + G ++L +M G D+ ++ + + + K+ H +IRNG
Sbjct: 297 IAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGF 356
Query: 259 ELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKR 318
E +I+ T+L+D Y+K G+VD A VF+++ KNI++WNA++GGYA +G ++ ++
Sbjct: 357 ESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEK 416
Query: 319 MQEDNLIPDAITMINLLPSCSKFGTLLEG-------KCIHGYAIRKMFLPHLVLETALVD 371
M N+ P+ +T + +L +C+ G +G +HG R M +++
Sbjct: 417 MIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHY------ACMIE 470
Query: 372 MYGKCGQLKFAECVFGRINEKNMVS-WNAIIAAYVQNGRNEEALEL 416
+ G+ G L A R K V+ W A++ A R +E LEL
Sbjct: 471 LLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNA----CRMQENLEL 512
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 134/260 (51%), Gaps = 1/260 (0%)
Query: 334 LLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKN 393
L+ +C + ++ K ++G+ + F P + ++ M+ KCG + A +F I E+N
Sbjct: 129 LVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERN 188
Query: 394 MVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHA 453
+ S+ +II+ +V G EA ELF + + + T A +L A A L ++ KQ+H
Sbjct: 189 LYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHV 248
Query: 454 YITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTI 513
KL + NTF S ++ MY+KCGD++ AR F+ M K V+WN +I YA+HG+
Sbjct: 249 CALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEE 308
Query: 514 SIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMV 573
++ L M+ +G+ ++ T +S++ S E + ++ + + I +V
Sbjct: 309 ALCLLYDMRDSGVSIDQFT-LSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANTALV 367
Query: 574 DLLGRTGNLDAAKQFIEEMP 593
D + G +D A+ +++P
Sbjct: 368 DFYSKWGRVDTARYVFDKLP 387
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 90/200 (45%), Gaps = 3/200 (1%)
Query: 409 RNEEALELFHCLRNQ-TLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTS 467
R EA ELF L + + K T +++ A L ++ K+++ ++ +
Sbjct: 102 RFREAFELFEILEIRCSFKVGVSTYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMM 161
Query: 468 NAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIE 527
N I+ M+ KCG + ARR FD + +NL S+ ++I + G + +LF M + +
Sbjct: 162 NRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSD 221
Query: 528 PNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQ 587
TF +L + + G + G +L +D G ++D+ + G+++ A+
Sbjct: 222 CETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCG-LIDMYSKCGDIEDARC 280
Query: 588 FIEEMPLVPTARIWGSLLTA 607
E MP T W +++
Sbjct: 281 AFECMP-EKTTVAWNNVIAG 299
>AT3G22150.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:7813028-7815490 FORWARD
Length = 820
Score = 346 bits (888), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 205/648 (31%), Positives = 353/648 (54%), Gaps = 11/648 (1%)
Query: 82 LFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLS 141
+F+ M + + WN +I + G E + M + +F V A S
Sbjct: 170 VFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRS 229
Query: 142 FIEGKKVHGKLIKIGLD--RDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMV 199
+ +G ++K+G + +D++V +S I MY + G +E + +VF++ R++ WN M+
Sbjct: 230 IKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMI 289
Query: 200 NGYRVIGDGL-KSLMCFKEMLGLGE-KPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNG 257
Y V D L +S+ F E +G E D ++ + + S V G++ H V +N
Sbjct: 290 GVY-VQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNF 348
Query: 258 LELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLK 317
EL I++ SL+ MY++CG V + VF M +++V+WN MI + NG E +
Sbjct: 349 RELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVY 408
Query: 318 RMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCG 377
MQ+ D IT+ LL + S GK H + IR+ + + + L+DMY K G
Sbjct: 409 EMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQG-IQFEGMNSYLIDMYSKSG 467
Query: 378 QLKFAECVF--GRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASI 435
++ ++ +F E++ +WN++I+ Y QNG E+ +F + Q ++P+AVT+ASI
Sbjct: 468 LIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASI 527
Query: 436 LPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNL 495
LPA +++ +V KQ+H + + L N F ++A+V MY+K G ++ A F +N
Sbjct: 528 LPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNS 587
Query: 496 VSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNS 555
V++ TMI+ Y HG G +I LF M+++GI+P+ TFV++LS+CS SGL++EG ++F
Sbjct: 588 VTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEE 647
Query: 556 MKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPT-ARIWGSLLTASRNNNDI 614
M+ YNI EHY C+ D+LGR G ++ A +F++ + A +WGSLL + + + ++
Sbjct: 648 MREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHGEL 707
Query: 615 FFAEFAAKHILSHDNDN--TGCYVLLANMYAEAGRWEDVEQIKLVMKKKGLAKTVDCCTV 672
AE ++ + D +G VLL+NMYAE +W+ V++++ M++KGL K V +
Sbjct: 708 ELAETVSERLAKFDKGKNFSGYEVLLSNMYAEEQKWKSVDKVRRGMREKGLKKEVGRSGI 767
Query: 673 ESKGKSQKFINNNKSHQQAYMIYDVLDIILKKIGEDVYIHSLSKFRPA 720
E G F++ ++ H + IYDV+D + K + D ++ +L P+
Sbjct: 768 EIAGYVNCFVSRDQEHPHSSEIYDVIDGLAKDMRGDSFLTTLPTVTPS 815
Score = 233 bits (595), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 155/565 (27%), Positives = 278/565 (49%), Gaps = 19/565 (3%)
Query: 41 NPTKKQMSETPKRGMIKPNSLSLTRSLCEFVDSGAMDNALYLFEKMNQPDTYIWNVIIRG 100
N T+ + +P + P + S+ L + G A LF+ + +P T +WN II G
Sbjct: 22 NQTRHSSTFSPP--TLTPQTPSIRSRLSKICQDGNPQLARQLFDAIPKPTTVLWNTIIIG 79
Query: 101 FSNKGLFQEVIDFYHRMEYEG--IGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLD 158
F L E + FY RM+ D +T+ +KAC + GK VH LI+ +
Sbjct: 80 FICNNLPHEALLFYSRMKKTAPFTNCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQN 139
Query: 159 RDIYVCNSLIDMYFK-------FGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKS 211
V NSL++MY F + +V KVF+ M +++V+WN +++ Y G ++
Sbjct: 140 SSRVVHNSLMNMYVSCLNAPDCFEY-DVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEA 198
Query: 212 LMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLEL--DIMVQTSLI 269
F M+ + KP +S ++ SI ++ + +++ G E D+ V +S I
Sbjct: 199 CRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAI 258
Query: 270 DMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTC-LKRMQEDNLIPDA 328
MYA+ G ++ + RVF+ +NI WN MIG Y N +ES L+ + ++ D
Sbjct: 259 SMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDE 318
Query: 329 ITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGR 388
+T + + S + G+ HG+ + +V+ +L+ MY +CG + + VF
Sbjct: 319 VTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLS 378
Query: 389 INEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSEC 448
+ E+++VSWN +I+A+VQNG ++E L L + ++ Q K D +T+ ++L A + L
Sbjct: 379 MRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIG 438
Query: 449 KQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSF--KNLVSWNTMIMAYA 506
KQ HA++ + + S ++ MY+K G ++ +++ F+ + ++ +WN+MI Y
Sbjct: 439 KQTHAFLIRQGIQFEGMNS-YLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYT 497
Query: 507 IHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGI 566
+G + +F +M + I PN T S+L +CS G V+ G +L Y +D +
Sbjct: 498 QNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQY-LDQNV 556
Query: 567 EHYGCMVDLLGRTGNLDAAKQFIEE 591
+VD+ + G + A+ +
Sbjct: 557 FVASALVDMYSKAGAIKYAEDMFSQ 581
>AT3G25970.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:9500116-9502056 REVERSE
Length = 646
Score = 345 bits (884), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 202/627 (32%), Positives = 352/627 (56%), Gaps = 20/627 (3%)
Query: 82 LFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLS 141
LF++M + D+ WN +I G+++ G ++ + M+ G +D ++F ++K +
Sbjct: 2 LFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKR 61
Query: 142 FIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNG 201
F G++VHG +IK G + ++YV +SL+DMY K VE A + F+ + + VSWN ++ G
Sbjct: 62 FDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAG 121
Query: 202 YRVIGD-----GLKSLMCFKEMLGL--GEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVI 254
+ + D L LM K + + G L+++ C++ K++H +V+
Sbjct: 122 FVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLL------KQVHAKVL 175
Query: 255 RNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMT-CKNIVAWNAMIGGYAINGHFLESF 313
+ GL+ +I + ++I YA CG V A+RVF+ + K++++WN+MI G++ + +F
Sbjct: 176 KLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAF 235
Query: 314 TCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMY 373
+MQ + D T LL +CS + GK +HG I+K AL+ MY
Sbjct: 236 ELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMY 295
Query: 374 GK--CGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVT 431
+ G ++ A +F + K+++SWN+II + Q G +E+A++ F LR+ +K D
Sbjct: 296 IQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYA 355
Query: 432 IASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMS 491
+++L + ++LAT+ +QIHA TK SN F ++++ MY+KCG +++AR+ F +S
Sbjct: 356 FSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQIS 415
Query: 492 FKN-LVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGW 550
K+ V+WN MI+ YA HG G +S+ LFS+M ++ + TF ++L++CS +GL+ EG
Sbjct: 416 SKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGL 475
Query: 551 ELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTASRN 610
EL N M+ Y I +EHY VDLLGR G ++ AK+ IE MPL P + + L R
Sbjct: 476 ELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLNPDPMVLKTFLGVCRA 535
Query: 611 NNDIFFAEFAAKHILSHDNDNTGCYVLLANMYAEAGRWEDVEQIKLVMKKKGLAKTVDCC 670
+I A A H+L + ++ YV L++MY++ +WE+ +K +MK++G+ K
Sbjct: 536 CGEIEMATQVANHLLEIEPEDHFTYVSLSHMYSDLKKWEEKASVKKMMKERGVKKVPGWS 595
Query: 671 TVESKGKSQKFINNNKSH---QQAYMI 694
+E + + + F ++S+ Q YM+
Sbjct: 596 WIEIRNQVKAFNAEDRSNPLCQDIYMM 622
Score = 165 bits (417), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 109/377 (28%), Positives = 191/377 (50%), Gaps = 5/377 (1%)
Query: 76 MDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYE-GIGIDNFTFPFVIK 134
+++A F+++++P++ WN +I GF + ME + + +D TF ++
Sbjct: 97 VEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLT 156
Query: 135 ACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAM-PLRDLV 193
+ K+VH K++K+GL +I +CN++I Y G V A++VF+ + +DL+
Sbjct: 157 LLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLI 216
Query: 194 SWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQV 253
SWN M+ G+ + F +M + D + L CS GK +H V
Sbjct: 217 SWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMV 276
Query: 254 IRNGLELDIMVQTSLIDMYAK--CGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLE 311
I+ GLE +LI MY + G ++ A +F + K++++WN++I G+A G +
Sbjct: 277 IKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSED 336
Query: 312 SFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVD 371
+ ++ + D LL SCS TL G+ IH A + F+ + + ++L+
Sbjct: 337 AVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIV 396
Query: 372 MYGKCGQLKFAECVFGRINEKN-MVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAV 430
MY KCG ++ A F +I+ K+ V+WNA+I Y Q+G + +L+LF + NQ +K D V
Sbjct: 397 MYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHV 456
Query: 431 TIASILPAYAELATVSE 447
T +IL A + + E
Sbjct: 457 TFTAILTACSHTGLIQE 473
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 113/229 (49%), Gaps = 24/229 (10%)
Query: 73 SGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFV 132
+G M++AL LFE + D WN II GF+ KGL ++ + F+ + I +D++ F +
Sbjct: 300 TGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSAL 359
Query: 133 IKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLR-D 191
+++C L + G+++H K G + +V +SLI MY K G +E A K F+ + +
Sbjct: 360 LRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHS 419
Query: 192 LVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHC 251
V+WN M+ GY G G SL F +M K D ++ + L CS H
Sbjct: 420 TVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACS-----------HT 468
Query: 252 QVIRNGLELDIMVQ------------TSLIDMYAKCGKVDYAERVFNEM 288
+I+ GLEL +++ + +D+ + G V+ A+ + M
Sbjct: 469 GLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIESM 517
>AT4G39952.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:18527680-18530007 FORWARD
Length = 726
Score = 342 bits (878), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 202/669 (30%), Positives = 343/669 (51%), Gaps = 59/669 (8%)
Query: 54 GMIKPNSLSLTRSLCEFVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDF 113
G + N ++ + + G + + +F + + D ++WN II+ + G + + F
Sbjct: 53 GGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCF 112
Query: 114 YHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIG-LDRDIYVCNSLIDMYF 172
+ M G D+FT P V+ AC LL F G VHG ++K G DR+ V S + Y
Sbjct: 113 FFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYS 172
Query: 173 KFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLG---EKPDRLS 229
K GF++ A VF+ MP RD+V+W +++G+ G+ L +M G +KP+ +
Sbjct: 173 KCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRT 232
Query: 230 MISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMT 289
+ CS ++ G+ +H ++NGL VQ+S+ Y+K G A F E+
Sbjct: 233 LECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELG 292
Query: 290 CKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAIT---MIN------LLPSCSK 340
+++ +W ++I A +G ESF MQ + PD + +IN L+P
Sbjct: 293 DEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKA 352
Query: 341 F--------------------------------------------GTLLEGKCIHGYAIR 356
F G +L GK +H Y ++
Sbjct: 353 FHGTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGAVLLGKSLHCYVVK 412
Query: 357 KMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALEL 416
+ + +L+D+YGK G L A +F + N+++WNA+IA+YV ++E+A+ L
Sbjct: 413 TSLDLTISVVNSLIDLYGKMGDLTVAWRMFCEA-DTNVITWNAMIASYVHCEQSEKAIAL 471
Query: 417 FHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAK 476
F + ++ KP ++T+ ++L A ++ + IH YIT+ E N S A++ MYAK
Sbjct: 472 FDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAK 531
Query: 477 CGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSL 536
CG L+ +R FD+ + K+ V WN MI Y +HG +I LF +M+++ ++P TF++L
Sbjct: 532 CGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLAL 591
Query: 537 LSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVP 596
LS+C+ +GLV +G +LF M Y++ ++HY C+VDLL R+GNL+ A+ + MP P
Sbjct: 592 LSACTHAGLVEQGKKLFLKMH-QYDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSP 650
Query: 597 TARIWGSLLTASRNNNDIFFAEFAAKHILSHDNDNTGCYVLLANMYAEAGRWEDVEQIKL 656
IWG+LL++ + + A+ ++ D N G Y++LANMY+ AG+WE+ E+ +
Sbjct: 651 DGVIWGTLLSSCMTHGEFEMGIRMAERAVASDPQNDGYYIMLANMYSAAGKWEEAERARE 710
Query: 657 VMKKKGLAK 665
+M++ G+ K
Sbjct: 711 MMRESGVGK 719
Score = 189 bits (481), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 132/512 (25%), Positives = 234/512 (45%), Gaps = 59/512 (11%)
Query: 136 CGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSW 195
C + LS +K + +I GL +I+V + LI Y +G ++ +VF + RD+ W
Sbjct: 34 CDQSLSLESLRKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLW 93
Query: 196 NCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIR 255
N ++ + GD +SL F ML G+ PD + + C+ G +H V++
Sbjct: 94 NSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLK 153
Query: 256 NG-LELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFT 314
+G + + V S + Y+KCG + A VF+EM +++VAW A+I G+ NG
Sbjct: 154 HGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLG 213
Query: 315 CLKRMQE---DNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVD 371
L +M D P+ T+ +CS G L EG+C+HG+A++ +++++
Sbjct: 214 YLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFS 273
Query: 372 MYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVT 431
Y K G A F + +++M SW +IIA+ ++G EE+ ++F ++N+ + PD V
Sbjct: 274 FYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVV 333
Query: 432 IA------------------------SILPAYA--ELATVSE---C-------------- 448
I+ S+L Y EL +V+E C
Sbjct: 334 ISCLINELGKMMLVPQGKAFHGTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTM 393
Query: 449 ----------KQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSW 498
K +H Y+ K L N+++ +Y K GDL A R F N+++W
Sbjct: 394 LKGYGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCEAD-TNVITW 452
Query: 499 NTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKM 558
N MI +Y +I LF RM +P+ T V+LL +C +G + G ++ +
Sbjct: 453 NAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERG-QMIHRYIT 511
Query: 559 DYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIE 590
+ + + ++D+ + G+L+ +++ +
Sbjct: 512 ETEHEMNLSLSAALIDMYAKCGHLEKSRELFD 543
>AT2G39620.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:16518968-16521478 REVERSE
Length = 836
Score = 339 bits (870), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 184/586 (31%), Positives = 327/586 (55%), Gaps = 4/586 (0%)
Query: 36 RIRKSNPTKKQMSETPKRGMIKPNSLSLTRSLCEFVDSGAMDNALYLFEKMNQPDTYIWN 95
++ KS+ + K+G I S L C D A ++ +FE++ + D W
Sbjct: 213 KLEKSDVCRCLHGLVIKKGFIFAFSSGLIDMYCNCADLYAAES---VFEEVWRKDESSWG 269
Query: 96 VIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKI 155
++ +++ G F+EV++ + M + ++ ++A + ++G +H ++
Sbjct: 270 TMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQ 329
Query: 156 GLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCF 215
GL D+ V SL+ MY K G +E+AE++F + RD+VSW+ M+ Y G +++ F
Sbjct: 330 GLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLF 389
Query: 216 KEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKC 275
++M+ + KP+ +++ S L GC+ R GK IHC I+ +E ++ T++I MYAKC
Sbjct: 390 RDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKC 449
Query: 276 GKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLL 335
G+ A + F + K+ VA+NA+ GY G ++F K M+ + PD+ TM+ +L
Sbjct: 450 GRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGML 509
Query: 336 PSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRIN-EKNM 394
+C+ G C++G I+ F + AL++M+ KC L A +F + EK+
Sbjct: 510 QTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKST 569
Query: 395 VSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAY 454
VSWN ++ Y+ +G+ EEA+ F ++ + +P+AVT +I+ A AEL+ + +H+
Sbjct: 570 VSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSS 629
Query: 455 ITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTIS 514
+ + S T N++V MYAKCG ++++ + F +S K +VSWNTM+ AYA HG + +
Sbjct: 630 LIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCA 689
Query: 515 IQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVD 574
+ LF M++N ++P+ +F+S+LS+C +GLV EG +F M + I+ +EHY CMVD
Sbjct: 690 VSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEVEHYACMVD 749
Query: 575 LLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTASRNNNDIFFAEFA 620
LLG+ G A + + M + + +WG+LL +SR + +++ + A
Sbjct: 750 LLGKAGLFGEAVEMMRRMRVKTSVGVWGALLNSSRMHCNLWLSNAA 795
Score = 266 bits (681), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 149/472 (31%), Positives = 259/472 (54%), Gaps = 15/472 (3%)
Query: 77 DNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRM-EYEGIGIDNFTFPFVIKA 135
D + +F+ + P +WN +IRG++ GL +E + F+ M E +GI D ++F F +KA
Sbjct: 50 DLSRVIFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKA 109
Query: 136 CGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSW 195
C + F +G ++H + ++GL+ D+Y+ +L++MY K + A +VF+ M ++D+V+W
Sbjct: 110 CAGSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTW 169
Query: 196 NCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSM------ISSLGGCSIGCCVRGGKEI 249
N MV+G G +L+ F +M D +S+ +S L + C+ G
Sbjct: 170 NTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHG---- 225
Query: 250 HCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHF 309
VI+ G + LIDMY C + AE VF E+ K+ +W M+ YA NG F
Sbjct: 226 --LVIKKGFIFAF--SSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFF 281
Query: 310 LESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETAL 369
E M+ ++ + + + L + + G L++G IH YA+++ + + + T+L
Sbjct: 282 EEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSL 341
Query: 370 VDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDA 429
+ MY KCG+L+ AE +F I ++++VSW+A+IA+Y Q G+++EA+ LF + +KP+A
Sbjct: 342 MSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNA 401
Query: 430 VTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDS 489
VT+ S+L A +A K IH Y K ++ S T+ A++ MYAKCG A + F+
Sbjct: 402 VTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFER 461
Query: 490 MSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCS 541
+ K+ V++N + Y G + ++ MK +G+ P+ T V +L +C+
Sbjct: 462 LPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCA 513
Score = 204 bits (519), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 136/449 (30%), Positives = 226/449 (50%), Gaps = 8/449 (1%)
Query: 147 KVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIG 206
+VHG LI GL N LI+ Y F +++ +F+++ +V WN M+ GY G
Sbjct: 23 QVHGSLIVSGLKPH----NQLINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRAG 78
Query: 207 DGLKSLMCFKEML-GLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQ 265
++L F M G PD+ S +L C+ + G IH + GLE D+ +
Sbjct: 79 LHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYIG 138
Query: 266 TSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLI 325
T+L++MY K + A +VF++M K++V WN M+ G A NG + M+ +
Sbjct: 139 TALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVD 198
Query: 326 PDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECV 385
D +++ NL+P+ SK +C+HG I+K F+ + L+DMY C L AE V
Sbjct: 199 IDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFI--FAFSSGLIDMYCNCADLYAAESV 256
Query: 386 FGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATV 445
F + K+ SW ++AAY NG EE LELF +RN ++ + V AS L A A + +
Sbjct: 257 FEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDL 316
Query: 446 SECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAY 505
+ IH Y + L + + +++ MY+KCG+L+ A + F ++ +++VSW+ MI +Y
Sbjct: 317 VKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASY 376
Query: 506 AIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYG 565
G +I LF M + I+PN T S+L C+ G + + + +I+
Sbjct: 377 EQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSI-HCYAIKADIESE 435
Query: 566 IEHYGCMVDLLGRTGNLDAAKQFIEEMPL 594
+E ++ + + G A + E +P+
Sbjct: 436 LETATAVISMYAKCGRFSPALKAFERLPI 464
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 103/387 (26%), Positives = 183/387 (47%), Gaps = 22/387 (5%)
Query: 248 EIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAING 307
++H +I +GL+ LI+ Y+ + D + +F+ + +V WN+MI GY G
Sbjct: 23 QVHGSLIVSGLK----PHNQLINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRAG 78
Query: 308 HFLESFTCLKRMQEDNLI-PDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLE 366
E+ M E+ I PD + L +C+ +G IH + +
Sbjct: 79 LHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYIG 138
Query: 367 TALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLK 426
TALV+MY K L A VF +++ K++V+WN +++ QNG + AL LFH +R+ +
Sbjct: 139 TALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVD 198
Query: 427 PDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFT-SNAIVYMYAKCGDLQTARR 485
D V++ +++PA ++L C+ +H + K F S+ ++ MY C DL A
Sbjct: 199 IDHVSLYNLIPAVSKLEKSDVCRCLHGLVIK---KGFIFAFSSGLIDMYCNCADLYAAES 255
Query: 486 YFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGL 545
F+ + K+ SW TM+ AYA +GF ++LF M+ + N+ S L + + G
Sbjct: 256 VFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGD 315
Query: 546 VNEGWELFNSMKMDYNIDYG----IEHYGCMVDLLGRTGNLDAAKQF---IEEMPLVPTA 598
+ +G + DY + G + ++ + + G L+ A+Q IE+ +V +
Sbjct: 316 LVKGIAIH-----DYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWS 370
Query: 599 RIWGSLLTASRNNNDI-FFAEFAAKHI 624
+ S A +++ I F + HI
Sbjct: 371 AMIASYEQAGQHDEAISLFRDMMRIHI 397
Score = 96.3 bits (238), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 135/299 (45%), Gaps = 34/299 (11%)
Query: 331 MINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRIN 390
++ +L C F LL+ +HG I PH L++ Y + + +F +
Sbjct: 8 LLLMLRECKNFRCLLQ---VHGSLIVSGLKPH----NQLINAYSLFQRQDLSRVIFDSVR 60
Query: 391 EKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQT-LKPDAVTIASILPAYAELATVSECK 449
+ +V WN++I Y + G + EAL F + + + PD + L A A +
Sbjct: 61 DPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGL 120
Query: 450 QIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHG 509
+IH I ++ L S+ + A+V MY K DL +AR+ FD M K++V+WNTM+ A +G
Sbjct: 121 RIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNG 180
Query: 510 FGTISIQLFSRMKQNGIEPNESTFVSLLSSCS----------ISGLVNEGWELFNSMKMD 559
+ ++ LF M+ ++ + + +L+ + S + GLV + +F
Sbjct: 181 CSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIF------ 234
Query: 560 YNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTASRNNNDIFFAE 618
++D+ +L AA+ EE+ + WG+++ A +N FF E
Sbjct: 235 -------AFSSGLIDMYCNCADLYAAESVFEEVWRKDESS-WGTMMAAYAHNG--FFEE 283
>AT1G59720.1 | Symbols: CRR28 | CRR28 (CHLORORESPIRATORY
REDUCTION28); endonuclease | chr1:21939868-21941784
REVERSE
Length = 638
Score = 339 bits (869), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 198/575 (34%), Positives = 307/575 (53%), Gaps = 21/575 (3%)
Query: 247 KEIHCQVIRNGLELD---IMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGY 303
K++H +R + + + ++ + + V+YA RVF+ + + WN +I
Sbjct: 65 KQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRAC 124
Query: 304 AIN-GHFLESFTCLKRMQE-DNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLP 361
A + E+F ++M E PD T +L +C+ EGK +H ++ F
Sbjct: 125 AHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGG 184
Query: 362 HLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLR 421
+ + L+ +YG CG L A VF + E+++VSWN++I A V+ G + AL+LF ++
Sbjct: 185 DVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQ 244
Query: 422 NQTLKPDAVTIASILPAYAELATVSECKQIHAYITK---LELSSNTFTSNAIVYMYAKCG 478
++ +PD T+ S+L A A L ++S HA++ + ++++ + N+++ MY KCG
Sbjct: 245 -RSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCG 303
Query: 479 DLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRM--KQNGIEPNESTFVSL 536
L+ A + F M ++L SWN MI+ +A HG ++ F RM K+ + PN TFV L
Sbjct: 304 SLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGL 363
Query: 537 LSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVP 596
L +C+ G VN+G + F+ M DY I+ +EHYGC+VDL+ R G + A + MP+ P
Sbjct: 364 LIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKP 423
Query: 597 TARIWGSLLTAS-RNNNDIFFAEFAAKHILSHDNDN-------TGCYVLLANMYAEAGRW 648
A IW SLL A + + +E A++I+ DN +G YVLL+ +YA A RW
Sbjct: 424 DAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRW 483
Query: 649 EDVEQIKLVMKKKGLAKTVDCCTVESKGKSQKFINNNKSHQQAYMIYDVLDIILKKIGED 708
DV ++ +M + G+ K C ++E G S +F + SH Q IY L +I ++
Sbjct: 484 NDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFFAGDTSHPQTKQIYQQLKVIDDRLRSI 543
Query: 709 VYIHSLSKFRPADVIKKKMK--SPQNHSVKLAICFGLISTAIGKPIIIRKNTRICKDCHI 766
Y+ S+ D K S + HS +LAI FGLI+ PI I KN R+C DCH
Sbjct: 544 GYLPDRSQAPLVDATNDGSKEYSLRLHSERLAIAFGLINLPPQTPIRIFKNLRVCNDCHE 603
Query: 767 AAKKISRVTKREIIVGDSKIFHHFEDGRCSCGDYW 801
K IS+V EIIV D FHHF+DG CSC DYW
Sbjct: 604 VTKLISKVFNTEIIVRDRVRFHHFKDGSCSCLDYW 638
Score = 180 bits (456), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 115/369 (31%), Positives = 195/369 (52%), Gaps = 11/369 (2%)
Query: 57 KPNSLSLTRSLCEFVDS-GAMDNALYLFEKMNQPDTYIWNVIIRGFSNK-GLFQEVIDFY 114
+P +L L + + S ++ A +F+ + +++WN +IR ++ +E Y
Sbjct: 79 EPATLFLYGKILQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLY 138
Query: 115 HRMEYEG-IGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFK 173
+M G D TFPFV+KAC + F EGK+VH +++K G D+YV N LI +Y
Sbjct: 139 RKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGS 198
Query: 174 FGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISS 233
G +++A KVF+ MP R LVSWN M++ G+ +L F+EM E PD +M S
Sbjct: 199 CGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQRSFE-PDGYTMQSV 257
Query: 234 LGGCSIGCCVRGGKEIHCQVIRN---GLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTC 290
L C+ + G H ++R + +D++V+ SLI+MY KCG + AE+VF M
Sbjct: 258 LSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQK 317
Query: 291 KNIVAWNAMIGGYAINGHFLESFTCLKRM--QEDNLIPDAITMINLLPSCSKFGTLLEGK 348
+++ +WNAMI G+A +G E+ RM + +N+ P+++T + LL +C+ G + +G+
Sbjct: 318 RDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGR 377
Query: 349 CIHGYAIRKMFL-PHLVLETALVDMYGKCGQLKFA-ECVFGRINEKNMVSWNAIIAAYVQ 406
+R + P L +VD+ + G + A + V + + V W +++ A +
Sbjct: 378 QYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCK 437
Query: 407 NGRNEEALE 415
G + E E
Sbjct: 438 KGASVELSE 446
Score = 158 bits (400), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 105/386 (27%), Positives = 199/386 (51%), Gaps = 20/386 (5%)
Query: 161 IYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNG-YRVIGDGLKSLMCFKEML 219
+++ ++ + F V A +VF+++ WN ++ + ++ M +++ML
Sbjct: 83 LFLYGKILQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKML 142
Query: 220 GLGE-KPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKV 278
GE PD+ + L C+ GK++HCQ++++G D+ V LI +Y CG +
Sbjct: 143 ERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCL 202
Query: 279 DYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSC 338
D A +VF+EM +++V+WN+MI G + + + MQ + PD TM ++L +C
Sbjct: 203 DLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQR-SFEPDGYTMQSVLSAC 261
Query: 339 SKFGTLLEGKCIHGYAIRKMFLP---HLVLETALVDMYGKCGQLKFAECVFGRINEKNMV 395
+ G+L G H + +RK + ++++ +L++MY KCG L+ AE VF + ++++
Sbjct: 262 AGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLA 321
Query: 396 SWNAIIAAYVQNGRNEEALELFHCL--RNQTLKPDAVTIASILPAYAELATVSECKQIHA 453
SWNA+I + +GR EEA+ F + + + ++P++VT +L A V++ +Q
Sbjct: 322 SWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFD 381
Query: 454 YITK---LELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFK-NLVSWNTMIMAYAIHG 509
+ + +E + + IV + A+ G + A SM K + V W +++ A G
Sbjct: 382 MMVRDYCIEPALEHY--GCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKG 439
Query: 510 FGTISIQLFSRMKQNGI---EPNEST 532
S++L + +N I E NES+
Sbjct: 440 ---ASVELSEEIARNIIGTKEDNESS 462
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 108/264 (40%), Gaps = 43/264 (16%)
Query: 443 ATVSECKQIHAYI---TKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWN 499
+ +S+ KQ+HA+ T E + F I+ + + D+ A R FDS+ + WN
Sbjct: 59 SDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSIENHSSFMWN 118
Query: 500 TMIMAYAIHGFGTI--SIQLFSRMKQNG-IEPNESTFVSLLSSCSISGLVNEGWELF--- 553
T+I A A H + L+ +M + G P++ TF +L +C+ +EG ++
Sbjct: 119 TLIRACA-HDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQI 177
Query: 554 --NSMKMDYNIDYGIEHY----GC---------------------MVDLLGRTGNLDAAK 586
+ D ++ G+ H GC M+D L R G D+A
Sbjct: 178 VKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSAL 237
Query: 587 QFIEEM--PLVPTARIWGSLLTASRNNNDIFFAEFAAKHILSHDNDNTGCYVLLAN---- 640
Q EM P S+L+A + +A +L + + VL+ N
Sbjct: 238 QLFREMQRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIE 297
Query: 641 MYAEAGRWEDVEQIKLVMKKKGLA 664
MY + G EQ+ M+K+ LA
Sbjct: 298 MYCKCGSLRMAEQVFQGMQKRDLA 321
>AT2G33760.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:14275800-14277551 FORWARD
Length = 583
Score = 338 bits (867), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 189/566 (33%), Positives = 310/566 (54%), Gaps = 5/566 (0%)
Query: 240 GCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAM 299
G V+ +++H +I G + T LI + + Y +F + + +N++
Sbjct: 19 GPRVKQLQQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSVPLPDDFLFNSV 78
Query: 300 IGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMF 359
I + L +RM N+ P T +++ SC+ L GK +H +A+ F
Sbjct: 79 IKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGF 138
Query: 360 LPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHC 419
++ ALV Y KCG ++ A VF R+ EK++V+WN++++ + QNG +EA+++F+
Sbjct: 139 GLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQ 198
Query: 420 LRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGD 479
+R +PD+ T S+L A A+ VS +H YI L N A++ +Y++CGD
Sbjct: 199 MRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGD 258
Query: 480 LQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQN-GIEPNESTFVSLLS 538
+ AR FD M N+ +W MI AY HG+G +++LF++M+ + G PN TFV++LS
Sbjct: 259 VGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLS 318
Query: 539 SCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTA 598
+C+ +GLV EG ++ M Y + G+EH+ CMVD+LGR G LD A +FI ++ A
Sbjct: 319 ACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKA 378
Query: 599 R---IWGSLLTASRNNNDIFFAEFAAKHILSHDNDNTGCYVLLANMYAEAGRWEDVEQIK 655
+W ++L A + + + AK +++ + DN G +V+L+N+YA +G+ ++V I+
Sbjct: 379 TAPALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNIYALSGKTDEVSHIR 438
Query: 656 LVMKKKGLAKTVDCCTVESKGKSQKFINNNKSHQQAYMIYDVLDIILKKIGEDVYIHSLS 715
M + L K V +E + K+ F ++SHQ+ IY L+ ++ + E Y
Sbjct: 439 DGMMRNNLRKQVGYSVIEVENKTYMFSMGDESHQETGEIYRYLETLISRCKEIGYAPVSE 498
Query: 716 KFRPADVIKKKMKSPQNHSVKLAICFGLISTAIGKPIIIRKNTRICKDCHIAAKKISRVT 775
+ ++K + + HS KLA+ FGL+ T + I I KN RIC+DCH A K IS V+
Sbjct: 499 EVMHQVEEEEKEFALRYHSEKLAVAFGLLKT-VDVAITIVKNLRICEDCHSAFKYISIVS 557
Query: 776 KREIIVGDSKIFHHFEDGRCSCGDYW 801
R+I V D FHHF++G CSC DYW
Sbjct: 558 NRQITVRDKLRFHHFQNGSCSCLDYW 583
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 108/377 (28%), Positives = 191/377 (50%), Gaps = 11/377 (2%)
Query: 37 IRKSNPTKKQMSETPKR----GMIKPNSLSLTRSLCEFVDSGAMDNALYLFEKMNQPDTY 92
I ++ P KQ+ + G + SL LT+ + + A+ LF + PD +
Sbjct: 15 IVRAGPRVKQLQQVHAHLIVTGYGRSRSL-LTKLITLACSARAIAYTHLLFLSVPLPDDF 73
Query: 93 IWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKL 152
++N +I+ S L + +Y RM + N+TF VIK+C L + GK VH
Sbjct: 74 LFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHA 133
Query: 153 IKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSL 212
+ G D YV +L+ Y K G +E A +VF+ MP + +V+WN +V+G+ G +++
Sbjct: 134 VVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAI 193
Query: 213 MCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMY 272
F +M G +PD + +S L C+ V G +H +I GL+L++ + T+LI++Y
Sbjct: 194 QVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLY 253
Query: 273 AKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQED-NLIPDAITM 331
++CG V A VF++M N+ AW AMI Y +G+ ++ +M++D IP+ +T
Sbjct: 254 SRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTF 313
Query: 332 INLLPSCSKFGTLLEGKCIHGYAIRKM-FLPHLVLETALVDMYGKCGQLKFAECVFGRIN 390
+ +L +C+ G + EG+ ++ + +P + +VDM G+ G L A +++
Sbjct: 314 VAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLD 373
Query: 391 EKNMVS----WNAIIAA 403
+ W A++ A
Sbjct: 374 ATGKATAPALWTAMLGA 390
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 113/434 (26%), Positives = 214/434 (49%), Gaps = 12/434 (2%)
Query: 122 IGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAE 181
+ ++ + +++A R+ ++VH LI G R + LI + +
Sbjct: 5 VAANSAAYEAIVRAGPRVKQL---QQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTH 61
Query: 182 KVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGC 241
+F ++PL D +N ++ + L + ++ ML P + S + C+
Sbjct: 62 LLFLSVPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLS 121
Query: 242 CVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIG 301
+R GK +HC + +G LD VQ +L+ Y+KCG ++ A +VF+ M K+IVAWN+++
Sbjct: 122 ALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVS 181
Query: 302 GYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLP 361
G+ NG E+ +M+E PD+ T ++LL +C++ G + G +H Y I +
Sbjct: 182 GFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDL 241
Query: 362 HLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLR 421
++ L TAL+++Y +CG + A VF ++ E N+ +W A+I+AY +G ++A+ELF+ +
Sbjct: 242 NVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKME 301
Query: 422 NQTLK-PDAVTIASILPAYAELATVSECKQIHAYITK-LELSSNTFTSNAIVYMYAKCGD 479
+ P+ VT ++L A A V E + ++ +TK L +V M + G
Sbjct: 302 DDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGF 361
Query: 480 LQTARRYFDSMSFKNLVS----WNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVS 535
L A ++ + + W M+ A +H + +++ R+ +EP+
Sbjct: 362 LDEAYKFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLI--ALEPDNPGHHV 419
Query: 536 LLSSC-SISGLVNE 548
+LS+ ++SG +E
Sbjct: 420 MLSNIYALSGKTDE 433
>AT3G14330.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4779688-4782451 REVERSE
Length = 710
Score = 338 bits (867), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 190/564 (33%), Positives = 311/564 (55%), Gaps = 20/564 (3%)
Query: 251 CQVIRN--GLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVA---WNAMIGGYAI 305
C +I N L + + + LI +++ C ++D A ++F+++T +++ W AM GY+
Sbjct: 154 CSLILNNPSLRHNPKLLSKLITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSR 213
Query: 306 NGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVL 365
NG ++ M + P ++ L +C L G+ IH +++ V+
Sbjct: 214 NGSPRDALIVYVDMLCSFIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVV 273
Query: 366 ETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTL 425
L+ +Y + G A VF ++E+N+V+WN++I+ + R E LF ++ + +
Sbjct: 274 YNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMI 333
Query: 426 KPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARR 485
T+ +ILPA + +A + K+IHA I K + + N+++ MY KCG+++ +RR
Sbjct: 334 GFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRR 393
Query: 486 YFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGL 545
FD M K+L SWN M+ YAI+G I LF M ++G+ P+ TFV+LLS CS +GL
Sbjct: 394 VFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGL 453
Query: 546 VNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLL 605
G LF MK ++ + +EHY C+VD+LGR G + A + IE MP P+A IWGSLL
Sbjct: 454 TEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLL 513
Query: 606 TASRNNNDIFFAEFAAKHILSHDNDNTGCYVLLANMYAEAGRWEDVEQIKLVMKKKGLAK 665
+ R + ++ E AAK + + N G YV+++N+YA+A W++V++I+ +MK++G+ K
Sbjct: 514 NSCRLHGNVSVGEIAAKELFVLEPHNPGNYVMVSNIYADAKMWDNVDKIREMMKQRGVKK 573
Query: 666 TVDCCTVESKGKSQKFINNN----KSHQQAYMIYDVLDIILKKIG----EDVYIHSLSKF 717
C V+ K K Q F+ ++ + ++ L ++K G V +H + +
Sbjct: 574 EAGCSWVQVKDKIQIFVAGGGYEFRNSDEYKKVWTELQEAIEKSGYSPNTSVVLHDVDEE 633
Query: 718 RPADVIKKKMKSPQNHSVKLAICFGLISTAIGKPIIIRKNTRICKDCHIAAKKISRVTKR 777
A+ + HS +LA + LI T G PI I KN R+C DCH K +S+VT+R
Sbjct: 634 TKANWV-------CGHSERLATTYSLIHTGEGVPIRITKNLRVCADCHSWMKIVSQVTRR 686
Query: 778 EIIVGDSKIFHHFEDGRCSCGDYW 801
I++ D+K FHHF DG CSC DYW
Sbjct: 687 VIVLRDTKRFHHFVDGICSCKDYW 710
Score = 155 bits (393), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 93/350 (26%), Positives = 178/350 (50%), Gaps = 5/350 (1%)
Query: 165 NSLIDMYFKFGFVEVAEKVFEAMPLRDLVS---WNCMVNGYRVIGDGLKSLMCFKEMLGL 221
+ LI ++ +++A K+F+ + L++ W M GY G +L+ + +ML
Sbjct: 171 SKLITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCS 230
Query: 222 GEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYA 281
+P S+ +L C +R G+ IH Q+++ ++D +V L+ +Y + G D A
Sbjct: 231 FIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDA 290
Query: 282 ERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKF 341
+VF+ M+ +N+V WN++I + E F ++MQE+ + T+ +LP+CS+
Sbjct: 291 RKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRV 350
Query: 342 GTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAII 401
LL GK IH ++ P + L +L+DMYGKCG+++++ VF + K++ SWN ++
Sbjct: 351 AALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIML 410
Query: 402 AAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYI-TKLEL 460
Y NG EE + LF + + PD +T ++L ++ + + T+ +
Sbjct: 411 NCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRV 470
Query: 461 SSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVS-WNTMIMAYAIHG 509
S +V + + G ++ A + ++M FK S W +++ + +HG
Sbjct: 471 SPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHG 520
Score = 146 bits (368), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 91/298 (30%), Positives = 151/298 (50%), Gaps = 15/298 (5%)
Query: 93 IWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKL 152
+W + G+S G ++ + Y M I NF+ +KAC L G+ +H ++
Sbjct: 203 VWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKACVDLKDLRVGRGIHAQI 262
Query: 153 IKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSL 212
+K D V N L+ +Y + G + A KVF+ M R++V+WN +++ V+ ++
Sbjct: 263 VKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLIS---VLSKKVRVH 319
Query: 213 MCF-------KEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQ 265
F +EM+G ++ + L CS + GKEIH Q++++ + D+ +
Sbjct: 320 EMFNLFRKMQEEMIGFSWA----TLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLL 375
Query: 266 TSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLI 325
SL+DMY KCG+V+Y+ RVF+ M K++ +WN M+ YAING+ E + M E +
Sbjct: 376 NSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVA 435
Query: 326 PDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFL-PHLVLETALVDMYGKCGQLKFA 382
PD IT + LL CS G G + + + P L LVD+ G+ G++K A
Sbjct: 436 PDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEA 493
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 129/242 (53%), Gaps = 4/242 (1%)
Query: 70 FVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTF 129
+++SG D+A +F+ M++ + WN +I S K E+ + + +M+ E IG T
Sbjct: 281 YMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATL 340
Query: 130 PFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPL 189
++ AC R+ + + GK++H +++K D+ + NSL+DMY K G VE + +VF+ M
Sbjct: 341 TTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLT 400
Query: 190 RDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEI 249
+DL SWN M+N Y + G+ + + F+ M+ G PD ++ ++ L GCS G +
Sbjct: 401 KDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSL 460
Query: 250 HCQVIRNGLELDIMVQ--TSLIDMYAKCGKVDYAERVFNEMTCKNIVA-WNAMIGGYAIN 306
+ ++ + ++ L+D+ + GK+ A +V M K + W +++ ++
Sbjct: 461 F-ERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLH 519
Query: 307 GH 308
G+
Sbjct: 520 GN 521
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 82/186 (44%), Gaps = 13/186 (6%)
Query: 57 KPNSLSLTRSLCEFVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHR 116
KP+ L + + G ++ + +F+ M D WN+++ ++ G +EVI+ +
Sbjct: 369 KPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEW 428
Query: 117 MEYEGIGIDNFTFPFVIKACGRL------LSFIEGKKVHGKLIKIGLDRDIYVCNSLIDM 170
M G+ D TF ++ C LS E K ++ + Y C L+D+
Sbjct: 429 MIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTE---FRVSPALEHYAC--LVDI 483
Query: 171 YFKFGFVEVAEKVFEAMPLRDLVS-WNCMVNGYRVIGDGLKSLMCFKEMLGL-GEKPDRL 228
+ G ++ A KV E MP + S W ++N R+ G+ + KE+ L P
Sbjct: 484 LGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKELFVLEPHNPGNY 543
Query: 229 SMISSL 234
M+S++
Sbjct: 544 VMVSNI 549
>AT4G37380.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:17572040-17573938 REVERSE
Length = 632
Score = 338 bits (867), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 192/590 (32%), Positives = 318/590 (53%), Gaps = 40/590 (6%)
Query: 248 EIHCQVIRNGLELDI---MVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYA 304
+IH ++R+ L L ++ L YA GK+ ++ +F++ ++ + A I +
Sbjct: 47 QIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTAS 106
Query: 305 INGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIR-------- 356
ING ++F ++ + P+ T +LL SCS GK IH + ++
Sbjct: 107 INGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCST----KSGKLIHTHVLKFGLGIDPY 162
Query: 357 -------------------KMF--LPH--LVLETALVDMYGKCGQLKFAECVFGRINEKN 393
K+F +P LV TA++ Y K G ++ A +F + E++
Sbjct: 163 VATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERD 222
Query: 394 MVSWNAIIAAYVQNGRNEEALELFH-CLRNQTLKPDAVTIASILPAYAELATVSECKQIH 452
+VSWN +I Y Q+G +AL LF L KPD +T+ + L A +++ + + IH
Sbjct: 223 IVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIH 282
Query: 453 AYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGT 512
++ + N ++ MY+KCG L+ A F+ K++V+WN MI YA+HG+
Sbjct: 283 VFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQ 342
Query: 513 ISIQLFSRMKQ-NGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGC 571
+++LF+ M+ G++P + TF+ L +C+ +GLVNEG +F SM +Y I IEHYGC
Sbjct: 343 DALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGC 402
Query: 572 MVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTASRNNNDIFFAEFAAKHILSHDNDN 631
+V LLGR G L A + I+ M + + +W S+L + + + D + A++++ + N
Sbjct: 403 LVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKN 462
Query: 632 TGCYVLLANMYAEAGRWEDVEQIKLVMKKKGLAKTVDCCTVESKGKSQKFINNNKSHQQA 691
+G YVLL+N+YA G +E V +++ +MK+KG+ K T+E + K +F ++ H ++
Sbjct: 463 SGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIENKVHEFRAGDREHSKS 522
Query: 692 YMIYDVLDIILKKIGEDVYIHSLSKFRPADVIKKKMKSPQNHSVKLAICFGLISTAIGKP 751
IY +L I ++I Y+ + + +K +S Q HS +LAI +GLIST G P
Sbjct: 523 KEIYTMLRKISERIKSHGYVPNTNTVLQDLEETEKEQSLQVHSERLAIAYGLISTKPGSP 582
Query: 752 IIIRKNTRICKDCHIAAKKISRVTKREIIVGDSKIFHHFEDGRCSCGDYW 801
+ I KN R+C DCH K IS++T R+I++ D FHHF DG CSCGD+W
Sbjct: 583 LKIFKNLRVCSDCHTVTKLISKITGRKIVMRDRNRFHHFTDGSCSCGDFW 632
Score = 177 bits (450), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 119/373 (31%), Positives = 186/373 (49%), Gaps = 47/373 (12%)
Query: 70 FVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTF 129
+ G + ++L LF + PD +++ I S GL + Y ++ I + FTF
Sbjct: 74 YASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTF 133
Query: 130 PFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPL 189
++K+C S GK +H ++K GL D YV L+D+Y K G V A+KVF+ MP
Sbjct: 134 SSLLKSC----STKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPE 189
Query: 190 R-------------------------------DLVSWNCMVNGYRVIGDGLKSLMCFKEM 218
R D+VSWN M++GY G +LM F+++
Sbjct: 190 RSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKL 249
Query: 219 LGLGE-KPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGK 277
L G+ KPD ++++++L CS + G+ IH V + + L++ V T LIDMY+KCG
Sbjct: 250 LAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGS 309
Query: 278 VDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQE-DNLIPDAITMINLLP 336
++ A VFN+ K+IVAWNAMI GYA++G+ ++ MQ L P IT I L
Sbjct: 310 LEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQ 369
Query: 337 SCSKFGTLLEGKCI-----HGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRIN- 390
+C+ G + EG I Y I+ P + LV + G+ GQLK A +N
Sbjct: 370 ACAHAGLVNEGIRIFESMGQEYGIK----PKIEHYGCLVSLLGRAGQLKRAYETIKNMNM 425
Query: 391 EKNMVSWNAIIAA 403
+ + V W++++ +
Sbjct: 426 DADSVLWSSVLGS 438
>AT5G08490.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:2745208-2747757 REVERSE
Length = 849
Score = 338 bits (867), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 196/673 (29%), Positives = 357/673 (53%), Gaps = 42/673 (6%)
Query: 78 NALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACG 137
+A F+ + D WN II GFS + + + M E + T V+ C
Sbjct: 176 DAYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCA 235
Query: 138 RL---LSFIEGKKVHGKLIKIG-LDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLV 193
+ ++ G+++H +++ L ++VCNSL+ Y + G +E A +F M +DLV
Sbjct: 236 SMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLV 295
Query: 194 SWNCMVNGYRVIGDGLKSLMCFKEMLGLGE-KPDRLSMISSLGGCSIGCCVRGGKEIHCQ 252
SWN ++ GY + K+ F ++ G+ PD +++IS L C+ + GKEIH
Sbjct: 296 SWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSY 355
Query: 253 VIRNGLEL-DIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLE 311
++R+ L D V +LI YA+ G A F+ M+ K+I++WNA++ +A + +
Sbjct: 356 ILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQ 415
Query: 312 SFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFL---PHLVLETA 368
L + + + D++T+++LL C + + K +HGY+++ L L A
Sbjct: 416 FLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNA 475
Query: 369 LVDMYGKCGQLKFAECVFGRINEK-NMVSWNAIIAAYVQNGRNEEALELF---------- 417
L+D Y KCG +++A +F ++E+ +VS+N++++ YV +G +++A LF
Sbjct: 476 LLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTT 535
Query: 418 ----------HCLRNQT-----------LKPDAVTIASILPAYAELATVSECKQIHAYIT 456
C N+ ++P+ VTI ++LP A+LA++ +Q H YI
Sbjct: 536 WSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYII 595
Query: 457 KLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQ 516
+ L + ++ +YAKCG L+ A F S + ++LV + M+ YA+HG G ++
Sbjct: 596 RGGLG-DIRLKGTLLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALM 654
Query: 517 LFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLL 576
++S M ++ I+P+ ++L++C +GL+ +G ++++S++ + + +E Y C VDL+
Sbjct: 655 IYSHMTESNIKPDHVFITTMLTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQYACAVDLI 714
Query: 577 GRTGNLDAAKQFIEEMPLVPTARIWGSLLTASRNNNDIFFAEFAAKHILSHDNDNTGCYV 636
R G LD A F+ +MP+ P A IWG+LL A N + A H+L ++D+TG +V
Sbjct: 715 ARGGRLDDAYSFVTQMPVEPNANIWGTLLRACTTYNRMDLGHSVANHLLQAESDDTGNHV 774
Query: 637 LLANMYAEAGRWEDVEQIKLVMKKKGLAKTVDCCTVESKGKSQKFINNNKSHQQAYMIYD 696
L++NMYA +WE V +++ +MKKK + K C +E G+ F++ + SH + I+D
Sbjct: 775 LISNMYAADAKWEGVMELRNLMKKKEMKKPAGCSWLEVDGQRNVFVSGDCSHPRRDSIFD 834
Query: 697 VLDIILKKIGEDV 709
+++ + ++ E V
Sbjct: 835 LVNALYLQMKEPV 847
Score = 220 bits (560), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 147/514 (28%), Positives = 257/514 (50%), Gaps = 54/514 (10%)
Query: 76 MDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEY-EGIGIDNFTFPFVIK 134
MD+ +F +M+ D +WN+++ G S +E + F+ M + + + TF V+
Sbjct: 72 MDDCQKMFRQMDSLDPVVWNIVLTGLS-VSCGRETMRFFKAMHFADEPKPSSVTFAIVLP 130
Query: 135 ACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFV-EVAEKVFEAMPLRDLV 193
C RL GK +H +IK GL++D V N+L+ MY KFGF+ A F+ + +D+V
Sbjct: 131 LCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVV 190
Query: 194 SWNCMVNGY---RVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCS-----IGCCVRG 245
SWN ++ G+ ++ D +S F ML +P+ ++ + L C+ I C R
Sbjct: 191 SWNAIIAGFSENNMMADAFRS---FCLMLKEPTEPNYATIANVLPVCASMDKNIAC--RS 245
Query: 246 GKEIHCQVI-RNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYA 304
G++IH V+ R+ L+ + V SL+ Y + G+++ A +F M K++V+WN +I GYA
Sbjct: 246 GRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYA 305
Query: 305 INGHFLESFTCLKRM-QEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFL-PH 362
N + ++F + + ++ PD++T+I++LP C++ L GK IH Y +R +L
Sbjct: 306 SNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLED 365
Query: 363 LVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRN 422
+ AL+ Y + G A F ++ K+++SWNAI+ A+ + + + L L H L N
Sbjct: 366 TSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLN 425
Query: 423 QTLKPDAVTIASILPAYAELATVSECKQIHAYITKLEL---SSNTFTSNAIVYMYAKCGD 479
+ + D+VTI S+L + + + K++H Y K L NA++ YAKCG+
Sbjct: 426 EAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGN 485
Query: 480 LQTARR--------------------------------YFDSMSFKNLVSWNTMIMAYAI 507
++ A + F MS +L +W+ M+ YA
Sbjct: 486 VEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAE 545
Query: 508 HGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCS 541
+I +F ++ G+ PN T ++LL C+
Sbjct: 546 SCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCA 579
Score = 207 bits (528), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 156/550 (28%), Positives = 273/550 (49%), Gaps = 42/550 (7%)
Query: 120 EGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEV 179
G G D+ F V+KAC + G+ +HG + K+G V S+++MY K ++
Sbjct: 15 SGFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDD 74
Query: 180 AEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSI 239
+K+F M D V WN ++ G V G +++ FK M ++P S+ ++ +
Sbjct: 75 CQKMFRQMDSLDPVVWNIVLTGLSV-SCGRETMRFFKAM-HFADEPKPSSVTFAI---VL 129
Query: 240 GCCVR-----GGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKV-DYAERVFNEMTCKNI 293
CVR GK +H +I+ GLE D +V +L+ MYAK G + A F+ + K++
Sbjct: 130 PLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDV 189
Query: 294 VAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLL---EGKCI 350
V+WNA+I G++ N ++F M ++ P+ T+ N+LP C+ + G+ I
Sbjct: 190 VSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQI 249
Query: 351 HGYAIRKMFL-PHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGR 409
H Y +++ +L H+ + +LV Y + G+++ A +F R+ K++VSWN +IA Y N
Sbjct: 250 HSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCE 309
Query: 410 NEEALELFHCLRNQ-TLKPDAVTIASILPAYAELATVSECKQIHAYITKLE-LSSNTFTS 467
+A +LFH L ++ + PD+VTI SILP A+L ++ K+IH+YI + L +T
Sbjct: 310 WFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVG 369
Query: 468 NAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIE 527
NA++ YA+ GD A F MS K+++SWN ++ A+A + L + I
Sbjct: 370 NALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAIT 429
Query: 528 PNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEH-------YGCMVDLLGRTG 580
+ T +SLL C + + E+ Y++ G+ H ++D + G
Sbjct: 430 LDSVTILSLLKFCINVQGIGKVKEVHG-----YSVKAGLLHDEEEPKLGNALLDAYAKCG 484
Query: 581 NLDAAKQFIEEMPLVPTARIWGSLL-----TASRNNNDIFFAEFAAKHILSHDNDNTGCY 635
N++ A + + T + SLL + S ++ + F E + + + +
Sbjct: 485 NVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTT--------W 536
Query: 636 VLLANMYAEA 645
L+ +YAE+
Sbjct: 537 SLMVRIYAES 546
Score = 175 bits (444), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 124/474 (26%), Positives = 221/474 (46%), Gaps = 40/474 (8%)
Query: 70 FVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEG-IGIDNFT 128
++ G ++ A LF +M D WNV+I G+++ + + +H + ++G + D+ T
Sbjct: 273 YLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVT 332
Query: 129 FPFVIKACGRLLSFIEGKKVHGKLIKIG-LDRDIYVCNSLIDMYFKFGFVEVAEKVFEAM 187
++ C +L GK++H +++ L D V N+LI Y +FG A F M
Sbjct: 333 IISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLM 392
Query: 188 PLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGK 247
+D++SWN +++ + + L +L D ++++S L C + K
Sbjct: 393 STKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVK 452
Query: 248 EIHCQVIRNGL---ELDIMVQTSLIDMYAKCGKVDYAERV-------------------- 284
E+H ++ GL E + + +L+D YAKCG V+YA ++
Sbjct: 453 EVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGY 512
Query: 285 ------------FNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMI 332
F EM+ ++ W+ M+ YA + E+ + +Q + P+ +T++
Sbjct: 513 VNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIM 572
Query: 333 NLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEK 392
NLLP C++ +L + HGY IR L + L+ L+D+Y KCG LK A VF +
Sbjct: 573 NLLPVCAQLASLHLVRQCHGYIIRGG-LGDIRLKGTLLDVYAKCGSLKHAYSVFQSDARR 631
Query: 393 NMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIH 452
++V + A++A Y +GR +EAL ++ + +KPD V I ++L A + + QI+
Sbjct: 632 DLVMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFITTMLTACCHAGLIQDGLQIY 691
Query: 453 AYITKLELSSNTFTSNA-IVYMYAKCGDLQTARRYFDSMSFK-NLVSWNTMIMA 504
I + T A V + A+ G L A + M + N W T++ A
Sbjct: 692 DSIRTVHGMKPTMEQYACAVDLIARGGRLDDAYSFVTQMPVEPNANIWGTLLRA 745
Score = 105 bits (263), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 138/275 (50%), Gaps = 18/275 (6%)
Query: 50 TPKRGMIKPNSLSLTRSLCEFVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQE 109
+ +R ++ NSL L +V+SG+ D+A LF +M+ D W++++R ++ E
Sbjct: 497 SERRTLVSYNSL-----LSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNE 551
Query: 110 VIDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLID 169
I + ++ G+ + T ++ C +L S ++ HG +I+ GL DI + +L+D
Sbjct: 552 AIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGLG-DIRLKGTLLD 610
Query: 170 MYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLS 229
+Y K G ++ A VF++ RDLV + MV GY V G G ++LM + M KPD +
Sbjct: 611 VYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVF 670
Query: 230 MISSLGGCSIGCCVRGGKEIHCQV-IRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEM 288
+ + L C ++ G +I+ + +G++ + +D+ A+ G++D A +M
Sbjct: 671 ITTMLTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQYACAVDLIARGGRLDDAYSFVTQM 730
Query: 289 TCK---NI--------VAWNAMIGGYAINGHFLES 312
+ NI +N M G+++ H L++
Sbjct: 731 PVEPNANIWGTLLRACTTYNRMDLGHSVANHLLQA 765
>AT5G40405.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT5G66520.1); Has
12548 Blast hits to 5076 proteins in 168 species: Archae
- 0; Bacteria - 2; Metazoa - 87; Fungi - 66; Plants -
12146; Viruses - 0; Other Eukaryotes - 247 (source: NCBI
BLink). | chr5:16169315-16171153 FORWARD
Length = 612
Score = 338 bits (866), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 185/561 (32%), Positives = 298/561 (53%), Gaps = 41/561 (7%)
Query: 278 VDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRM--QEDNLIPDAITMINLL 335
+DYA ++ + + A N+MI + + +SF +R+ ++L PD T+ L+
Sbjct: 56 LDYANQILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLV 115
Query: 336 PSCSKFGTLLEGKCIHGYAIRKMF-------------------------------LPHLV 364
+C+ G +HG IR+ F P V
Sbjct: 116 QACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFV 175
Query: 365 LETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQT 424
TA+V +CG + FA +F + E++ ++WNA+I+ Y Q G + EAL +FH ++ +
Sbjct: 176 CRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEG 235
Query: 425 LKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTAR 484
+K + V + S+L A +L + + + H+YI + ++ + +V +YAKCGD++ A
Sbjct: 236 VKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAM 295
Query: 485 RYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISG 544
F M KN+ +W++ + A++GFG ++LFS MKQ+G+ PN TFVS+L CS+ G
Sbjct: 296 EVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVG 355
Query: 545 LVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSL 604
V+EG F+SM+ ++ I+ +EHYGC+VDL R G L+ A I++MP+ P A +W SL
Sbjct: 356 FVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSL 415
Query: 605 LTASRNNNDIFFAEFAAKHILSHDNDNTGCYVLLANMYAEAGRWEDVEQIKLVMKKKGLA 664
L ASR ++ A+K +L + N G YVLL+N+YA++ W++V ++ MK KG+
Sbjct: 416 LHASRMYKNLELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVR 475
Query: 665 KTVDCCTVESKGKSQKFINNNKSHQQAYMIYDVLDIILKKIGEDVYIHSLSKFRPADVIK 724
K C +E G+ +F +KSH + Y +D + K I + + +
Sbjct: 476 KQPGCSVMEVNGEVHEFFVGDKSHPK----YTQIDAVWKDISRRLRLAGYKADTTPVMFD 531
Query: 725 KKMKSPQN----HSVKLAICFGLISTAIGKPIIIRKNTRICKDCHIAAKKISRVTKREII 780
+ ++ HS K AI FG++S PI I KN R+C DCH + IS++ REII
Sbjct: 532 IDEEEKEDALCLHSEKAAIAFGIMSLKEDVPIRIVKNLRVCGDCHQVSMMISKIFNREII 591
Query: 781 VGDSKIFHHFEDGRCSCGDYW 801
V D FHHF+DG CSC +W
Sbjct: 592 VRDRNRFHHFKDGHCSCNGFW 612
Score = 167 bits (424), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 109/380 (28%), Positives = 187/380 (49%), Gaps = 39/380 (10%)
Query: 72 DSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEG--IGIDNFTF 129
D +D A + ++ +P + N +IR + ++ DFY R+ G + DN+T
Sbjct: 52 DHKYLDYANQILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTV 111
Query: 130 PFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVE----------- 178
F+++AC L G +VHG I+ G D D +V LI +Y + G ++
Sbjct: 112 NFLVQACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPC 171
Query: 179 --------------------VAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEM 218
A K+FE MP RD ++WN M++GY +G+ ++L F M
Sbjct: 172 PDFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLM 231
Query: 219 LGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKV 278
G K + ++MIS L C+ + G+ H + RN +++ + + T+L+D+YAKCG +
Sbjct: 232 QLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDM 291
Query: 279 DYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSC 338
+ A VF M KN+ W++ + G A+NG + M++D + P+A+T +++L C
Sbjct: 292 EKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGC 351
Query: 339 SKFGTLLEGKCIHGYAIRKMF--LPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVS 396
S G + EG+ H ++R F P L LVD+Y + G+L+ A + I + M
Sbjct: 352 SVVGFVDEGQ-RHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSI---IQQMPMKP 407
Query: 397 WNAIIAAYVQNGRNEEALEL 416
A+ ++ + R + LEL
Sbjct: 408 HAAVWSSLLHASRMYKNLEL 427
Score = 145 bits (367), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 103/402 (25%), Positives = 180/402 (44%), Gaps = 37/402 (9%)
Query: 140 LSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYF--KFGFVEVAEKVFEAMPLRDLVSWNC 197
++F E +++H KL G +D ++ + +++ A ++ + L + N
Sbjct: 17 ITFKEVRQIHAKLYVDGTLKDDHLVGHFVKAVALSDHKYLDYANQILDRSEKPTLFALNS 76
Query: 198 MVNGYRVIGDGLKSLMCFKEMLGLGE--KPDRLSMISSLGGCSIGCCVRGGKEIHCQVIR 255
M+ + KS ++ +L G KPD ++ + C+ G ++H IR
Sbjct: 77 MIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQVHGMTIR 136
Query: 256 NGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIV--------------------- 294
G + D VQT LI +YA+ G +D +VFN + C + V
Sbjct: 137 RGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKL 196
Query: 295 ----------AWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTL 344
AWNAMI GYA G E+ MQ + + + + MI++L +C++ G L
Sbjct: 197 FEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGAL 256
Query: 345 LEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAY 404
+G+ H Y R + L T LVD+Y KCG ++ A VF + EKN+ +W++ +
Sbjct: 257 DQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGL 316
Query: 405 VQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSEC-KQIHAYITKLELSSN 463
NG E+ LELF ++ + P+AVT S+L + + V E + + + +
Sbjct: 317 AMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQ 376
Query: 464 TFTSNAIVYMYAKCGDLQTARRYFDSMSFK-NLVSWNTMIMA 504
+V +YA+ G L+ A M K + W++++ A
Sbjct: 377 LEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHA 418
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/174 (20%), Positives = 87/174 (50%), Gaps = 9/174 (5%)
Query: 56 IKPNSLSLTRSLCE-----FVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEV 110
I+ N + +T L + G M+ A+ +F M + + Y W+ + G + G ++
Sbjct: 266 IERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKC 325
Query: 111 IDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIK--IGLDRDIYVCNSLI 168
++ + M+ +G+ + TF V++ C ++ F++ + H ++ G++ + L+
Sbjct: 326 LELFSLMKQDGVTPNAVTFVSVLRGCS-VVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLV 384
Query: 169 DMYFKFGFVEVAEKVFEAMPLRDLVS-WNCMVNGYRVIGDGLKSLMCFKEMLGL 221
D+Y + G +E A + + MP++ + W+ +++ R+ + ++ K+ML L
Sbjct: 385 DLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLELGVLASKKMLEL 438
>AT4G14050.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:8103645-8105483 REVERSE
Length = 612
Score = 335 bits (859), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 196/606 (32%), Positives = 312/606 (51%), Gaps = 47/606 (7%)
Query: 237 CSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAW 296
C+ + K +H +++ G+ + +L+++Y KCG +A +VF+EM ++ +AW
Sbjct: 13 CARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIAW 72
Query: 297 NAMIGGYAINGHFLESFTCLKRMQEDN---LIPDAITMINLLPSCSKFGTLLEGKCIHGY 353
+++ A+N L T + L PD L+ +C+ G++ G+ +H +
Sbjct: 73 ASVLT--ALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCH 130
Query: 354 AIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEA 413
I + V++++LVDMY KCG L A+ VF I KN +SW A+++ Y ++GR EEA
Sbjct: 131 FIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEA 190
Query: 414 LELFHCLRNQTLKP--------------------------------DAVTIASILPAYAE 441
LELF L + L D + ++SI+ A A
Sbjct: 191 LELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACAN 250
Query: 442 LATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTM 501
LA +Q+H + L S F SNA++ MYAKC D+ A+ F M +++VSW ++
Sbjct: 251 LAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSL 310
Query: 502 IMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYN 561
I+ A HG ++ L+ M +G++PNE TFV L+ +CS G V +G ELF SM DY
Sbjct: 311 IVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYG 370
Query: 562 IDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTASRNNNDIFFAEFAA 621
I ++HY C++DLLGR+G LD A+ I MP P W +LL+A + A
Sbjct: 371 IRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIA 430
Query: 622 KHILSHDN-DNTGCYVLLANMYAEAGRWEDVEQIKLVMKKKGLAKTVDCCTVESKGKSQK 680
H++S + Y+LL+N+YA A W V + + + + + K +VE + +++
Sbjct: 431 DHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSVEVRKETEV 490
Query: 681 FINNNKSHQQAYMIYDVLDIILKKIGEDV-----YIHSLSKFRPADVIKKKMKSPQNHSV 735
F SH I+ +LKK+ E++ Y+ S ++K K HS
Sbjct: 491 FYAGETSHPLKEDIFR----LLKKLEEEMRIRNGYVPDTSWILHDMDEQEKEKLLFWHSE 546
Query: 736 KLAICFGLISTAIGKPIIIRKNTRICKDCHIAAKKISRVTKREIIVGDSKIFHHFEDGRC 795
+ A+ +GL+ G PI I KN R+C DCH+ K IS +T+REIIV D+ +HHF+ G+C
Sbjct: 547 RSAVAYGLLKAVPGTPIRIVKNLRVCGDCHVVLKHISEITEREIIVRDATRYHHFKGGKC 606
Query: 796 SCGDYW 801
SC D+W
Sbjct: 607 SCNDFW 612
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 111/419 (26%), Positives = 197/419 (47%), Gaps = 46/419 (10%)
Query: 74 GAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEG-IGIDNFTFPFV 132
GA +AL +F++M D W ++ + L + + + + + D+F F +
Sbjct: 52 GAASHALQVFDEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSAL 111
Query: 133 IKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDL 192
+KAC L S G++VH I D V +SL+DMY K G + A+ VF+++ +++
Sbjct: 112 VKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNT 171
Query: 193 VSWNCMVNGY-------------RVI------------------GDGLKSLMCFKEMLGL 221
+SW MV+GY R++ G GL++ F EM
Sbjct: 172 ISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRE 231
Query: 222 G-EKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDY 280
+ D L + S +G C+ G+++H VI G + + + +LIDMYAKC V
Sbjct: 232 RVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIA 291
Query: 281 AERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSK 340
A+ +F+ M +++V+W ++I G A +G ++ M + P+ +T + L+ +CS
Sbjct: 292 AKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSH 351
Query: 341 FGTLLEGKCI-----HGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRIN-EKNM 394
G + +G+ + Y IR P L T L+D+ G+ G L AE + + +
Sbjct: 352 VGFVEKGRELFQSMTKDYGIR----PSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDE 407
Query: 395 VSWNAIIAAYVQNGRNEEALELF-HCLRNQTLK-PDAVTIASILPAYAEL-ATVSECKQ 450
+W A+++A + GR + + + H + + LK P + S + A A L VSE ++
Sbjct: 408 PTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARR 466
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 144/303 (47%), Gaps = 20/303 (6%)
Query: 59 NSLSLTRSLCEFVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRME 118
N++S T + + SG + AL LF + + Y W +I GF G E + M
Sbjct: 170 NTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMR 229
Query: 119 YEGIGI-DNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFV 177
E + I D ++ AC L + I G++VHG +I +G D +++ N+LIDMY K V
Sbjct: 230 RERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDV 289
Query: 178 EVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGC 237
A+ +F M RD+VSW ++ G G K+L + +M+ G KP+ ++ + + C
Sbjct: 290 IAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYAC 349
Query: 238 SIGCCVRGGKEIHCQVIRN-GLELDIMVQTSLIDMYAKCGKVDYAERVFNEMT-CKNIVA 295
S V G+E+ + ++ G+ + T L+D+ + G +D AE + + M +
Sbjct: 350 SHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPT 409
Query: 296 WNAMIG----------GYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLL 345
W A++ G I H + SF ++++ + I + N+ S S +G +
Sbjct: 410 WAALLSACKRQGRGQMGIRIADHLVSSF----KLKDPSTY---ILLSNIYASASLWGKVS 462
Query: 346 EGK 348
E +
Sbjct: 463 EAR 465
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 118/237 (49%), Gaps = 8/237 (3%)
Query: 324 LIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAE 383
LIP + + L C++ TL K +H + ++ + L LV++YGKCG A
Sbjct: 2 LIPHYLHQLQL---CARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHAL 58
Query: 384 CVFGRINEKNMVSWNAIIAAYVQNGRNEEAL-ELFHCLRNQTLKPDAVTIASILPAYAEL 442
VF + ++ ++W +++ A Q + + L + L+PD ++++ A A L
Sbjct: 59 QVFDEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANL 118
Query: 443 ATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMI 502
++ +Q+H + E +++ +++V MYAKCG L +A+ FDS+ KN +SW M+
Sbjct: 119 GSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMV 178
Query: 503 MAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMD 559
YA G +++LF + N ++ +L+S SG E + +F M+ +
Sbjct: 179 SGYAKSGRKEEALELFRILPVK----NLYSWTALISGFVQSGKGLEAFSVFTEMRRE 231
>AT2G41080.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:17132857-17134554 FORWARD
Length = 565
Score = 335 bits (858), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 192/541 (35%), Positives = 296/541 (54%), Gaps = 3/541 (0%)
Query: 263 MVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQED 322
M LI+ Y + G + A +VF+EM + + WNAMI G E + + M
Sbjct: 26 MSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGL 85
Query: 323 NLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFA 382
PD T+ ++ + ++ G+ IHGY I+ LV+ ++L MY + G+L+
Sbjct: 86 GFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDG 145
Query: 383 ECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAEL 442
E V + +N+V+WN +I QNG E L L+ ++ +P+ +T ++L + ++L
Sbjct: 146 EIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDL 205
Query: 443 ATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMI 502
A + +QIHA K+ SS ++++ MY+KCG L A + F ++ V W++MI
Sbjct: 206 AIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMI 265
Query: 503 MAYAIHGFGTISIQLFSRM-KQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYN 561
AY HG G +I+LF+ M +Q +E NE F++LL +CS SGL ++G ELF+ M Y
Sbjct: 266 SAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYG 325
Query: 562 IDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTASRNNNDIFFAEFAA 621
G++HY C+VDLLGR G LD A+ I MP+ IW +LL+A + + A+
Sbjct: 326 FKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVF 385
Query: 622 KHILSHDNDNTGCYVLLANMYAEAGRWEDVEQIKLVMKKKGLAKTVDCCTVESKGKSQKF 681
K IL D +++ CYVLLAN++A A RW DV +++ M+ K + K E KG+ +F
Sbjct: 386 KEILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQF 445
Query: 682 INNNKSHQQAYMIYDVL-DIILKKIGEDVYIHSLSKFRPADVIKKKMKSPQNHSVKLAIC 740
++S ++ IY L ++ L+ + + S D +K+ Q HS KLA+
Sbjct: 446 KMGDRSQSKSKEIYSYLKELTLEMKLKGYKPDTASVLHDMDEEEKESDLVQ-HSEKLAVA 504
Query: 741 FGLISTAIGKPIIIRKNTRICKDCHIAAKKISRVTKREIIVGDSKIFHHFEDGRCSCGDY 800
F L+ G PI I KN R+C DCH+A K IS + REI + D FHHF +G+CSCGDY
Sbjct: 505 FALMILPEGAPIRIIKNLRVCSDCHVAFKYISVIKNREITLRDGSRFHHFINGKCSCGDY 564
Query: 801 W 801
W
Sbjct: 565 W 565
Score = 176 bits (445), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 125/410 (30%), Positives = 204/410 (49%), Gaps = 9/410 (2%)
Query: 138 RLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNC 197
+L F V+G++ K ++ N LI+ Y + G + A KVF+ MP R L +WN
Sbjct: 6 KLGDFPSAVAVYGRMRK----KNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNA 61
Query: 198 MVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNG 257
M+ G + L F+EM GLG PD ++ S G + V G++IH I+ G
Sbjct: 62 MIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYG 121
Query: 258 LELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLK 317
LELD++V +SL MY + GK+ E V M +N+VAWN +I G A NG K
Sbjct: 122 LELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYK 181
Query: 318 RMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCG 377
M+ P+ IT + +L SCS +G+ IH AI+ + + ++L+ MY KCG
Sbjct: 182 MMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCG 241
Query: 378 QLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQT-LKPDAVTIASIL 436
L A F +++ V W+++I+AY +G+ +EA+ELF+ + QT ++ + V ++L
Sbjct: 242 CLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLL 301
Query: 437 PAYAELATVSECKQI-HAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFK-N 494
A + + ++ + K +V + + G L A SM K +
Sbjct: 302 YACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTD 361
Query: 495 LVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISG 544
+V W T++ A IH ++ ++F + Q I+PN+S LL++ S
Sbjct: 362 IVIWKTLLSACNIHKNAEMAQRVFKEILQ--IDPNDSACYVLLANVHASA 409
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 107/353 (30%), Positives = 178/353 (50%), Gaps = 5/353 (1%)
Query: 55 MIKPNSLSLTRSLCEFVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFY 114
M K N +S + +V +G + NA +F++M WN +I G +E + +
Sbjct: 20 MRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLF 79
Query: 115 HRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKF 174
M G D +T V L S G+++HG IK GL+ D+ V +SL MY +
Sbjct: 80 REMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRN 139
Query: 175 GFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSL 234
G ++ E V +MP+R+LV+WN ++ G G L +K M G +P++++ ++ L
Sbjct: 140 GKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVL 199
Query: 235 GGCSIGCCVRG-GKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNI 293
CS +RG G++IH + I+ G + V +SLI MY+KCG + A + F+E ++
Sbjct: 200 SSCS-DLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDE 258
Query: 294 VAWNAMIGGYAINGHFLESFTCLKRMQED-NLIPDAITMINLLPSCSKFGTLLEGKCIHG 352
V W++MI Y +G E+ M E N+ + + +NLL +CS G +G +
Sbjct: 259 VMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFD 318
Query: 353 YAIRKM-FLPHLVLETALVDMYGKCGQLKFAECVFGRINEK-NMVSWNAIIAA 403
+ K F P L T +VD+ G+ G L AE + + K ++V W +++A
Sbjct: 319 MMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSA 371
>AT1G74630.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28030521-28032452 FORWARD
Length = 643
Score = 330 bits (847), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 217/661 (32%), Positives = 333/661 (50%), Gaps = 46/661 (6%)
Query: 147 KVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEV---AEKVFEAMPLRDLVSWNCMVNGYR 203
++HG IK G+D D Y LI ++ + A ++ P D +N +V GY
Sbjct: 23 QIHGLFIKYGVDTDSYFTGKLI-LHCAISISDALPYARRLLLCFPEPDAFMFNTLVRGYS 81
Query: 204 VIGDGLKSLMCFKEMLGLGEK-PDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDI 262
+ S+ F EM+ G PD S + +R G ++HCQ +++GLE +
Sbjct: 82 ESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQMHCQALKHGLESHL 141
Query: 263 MVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQED 322
V T+LI MY CG V++A +VF+EM N+VAWNA+I C +
Sbjct: 142 FVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITA------------CFR----G 185
Query: 323 NLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFA 382
N + A + + KM + + ++ Y K G+L+ A
Sbjct: 186 NDVAGAREIFD-----------------------KMLVRNHTSWNVMLAGYIKAGELESA 222
Query: 383 ECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAEL 442
+ +F + ++ VSW+ +I NG E+ F L+ + P+ V++ +L A ++
Sbjct: 223 KRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQS 282
Query: 443 ATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKN-LVSWNTM 501
+ K +H ++ K S +NA++ MY++CG++ AR F+ M K +VSW +M
Sbjct: 283 GSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSM 342
Query: 502 IMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYN 561
I A+HG G +++LF+ M G+ P+ +F+SLL +CS +GL+ EG + F+ MK Y+
Sbjct: 343 IAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYH 402
Query: 562 IDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTASRNNNDIFFAEFAA 621
I+ IEHYGCMVDL GR+G L A FI +MP+ PTA +W +LL A ++ +I AE
Sbjct: 403 IEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVK 462
Query: 622 KHILSHDNDNTGCYVLLANMYAEAGRWEDVEQIKLVMKKKGLAKTVDCCTVESKGKSQKF 681
+ + D +N+G VLL+N YA AG+W+DV I+ M + + KT VE KF
Sbjct: 463 QRLNELDPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQRIKKTTAWSLVEVGKTMYKF 522
Query: 682 INNNKSHQQAYMIYDVL-DIILKKIGEDVYIHSLSKFRPADVIKKKMKSPQNHSVKLAIC 740
K ++ L +IIL+ E Y ++ ++K HS KLA+
Sbjct: 523 TAGEKKKGIDIEAHEKLKEIILRLKDEAGYTPEVASALYDVEEEEKEDQVSKHSEKLALA 582
Query: 741 FGLISTAIGKPIIIRKNTRICKDCHIAAKKISRVTKREIIVGDSKIFHHFEDGRCSCGDY 800
F L + G I I KN RIC+DCH K S+V EI+V D FH F+DG CSC DY
Sbjct: 583 FALARLSKGANIRIVKNLRICRDCHAVMKLTSKVYGVEILVRDRNRFHSFKDGSCSCRDY 642
Query: 801 W 801
W
Sbjct: 643 W 643
Score = 199 bits (507), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 136/479 (28%), Positives = 238/479 (49%), Gaps = 51/479 (10%)
Query: 68 CEFVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEG-IGIDN 126
C S A+ A L +PD +++N ++RG+S + + M +G + D+
Sbjct: 47 CAISISDALPYARRLLLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDS 106
Query: 127 FTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEA 186
F+F FVIKA S G ++H + +K GL+ ++V +LI MY G VE A KVF+
Sbjct: 107 FSFAFVIKAVENFRSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDE 166
Query: 187 MPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGG 246
M +LV+WN ++ CF+ G V G
Sbjct: 167 MHQPNLVAWNAVITA------------CFR-----------------------GNDVAGA 191
Query: 247 KEIHCQ-VIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAI 305
+EI + ++RN ++M+ Y K G+++ A+R+F+EM ++ V+W+ MI G A
Sbjct: 192 REIFDKMLVRNHTSWNVMLAG-----YIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAH 246
Query: 306 NGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVL 365
NG F ESF + +Q + P+ +++ +L +CS+ G+ GK +HG+ + + + +
Sbjct: 247 NGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSV 306
Query: 366 ETALVDMYGKCGQLKFAECVFGRINEKN-MVSWNAIIAAYVQNGRNEEALELFHCLRNQT 424
AL+DMY +CG + A VF + EK +VSW ++IA +G+ EEA+ LF+ +
Sbjct: 307 NNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYG 366
Query: 425 LKPDAVTIASILPAYAELATVSECKQIHAYITKL-ELSSNTFTSNAIVYMYAKCGDLQTA 483
+ PD ++ S+L A + + E + + + ++ + +V +Y + G LQ A
Sbjct: 367 VTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKA 426
Query: 484 RRYFDSMSF-KNLVSWNTMIMAYAIHGFGTISIQLFSRMKQ--NGIEPNESTFVSLLSS 539
+ M + W T++ A + HG +I+L ++KQ N ++PN S + LLS+
Sbjct: 427 YDFICQMPIPPTAIVWRTLLGACSSHG----NIELAEQVKQRLNELDPNNSGDLVLLSN 481
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 141/292 (48%), Gaps = 5/292 (1%)
Query: 55 MIKPNSLSLTRSLCEFVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFY 114
M+ N S L ++ +G +++A +F +M D W+ +I G ++ G F E ++
Sbjct: 198 MLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYF 257
Query: 115 HRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKF 174
++ G+ + + V+ AC + SF GK +HG + K G + V N+LIDMY +
Sbjct: 258 RELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRC 317
Query: 175 GFVEVAEKVFEAM-PLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISS 233
G V +A VFE M R +VSW M+ G + G G +++ F EM G PD +S IS
Sbjct: 318 GNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISL 377
Query: 234 LGGCSIGCCVRGGKEIHCQVIR-NGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTC-K 291
L CS + G++ ++ R +E +I ++D+Y + GK+ A +M
Sbjct: 378 LHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPP 437
Query: 292 NIVAWNAMIGGYAINGHFLESFTCLKRMQE--DNLIPDAITMINLLPSCSKF 341
+ W ++G + +G+ + +R+ E N D + + N + K+
Sbjct: 438 TAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKW 489
Score = 112 bits (280), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 88/368 (23%), Positives = 155/368 (42%), Gaps = 43/368 (11%)
Query: 243 VRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKC--GKVDYAERVFNEMTCKNIVAWNAMI 300
+R +IH I+ G++ D LI A + YA R+ + +N ++
Sbjct: 18 LRALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCFPEPDAFMFNTLV 77
Query: 301 GGYAINGHFLESFTCLKRMQEDNLI-PDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMF 359
GY+ + S M + PD+ + ++ + F +L G +H A++
Sbjct: 78 RGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQMHCQALKHGL 137
Query: 360 LPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHC 419
HL + T L+ MYG CG ++FA VF +++ N+V+WNA+I A + A E+F
Sbjct: 138 ESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDVAGAREIFDK 197
Query: 420 LRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGD 479
+ L N + N ++ Y K G+
Sbjct: 198 M---------------------------------------LVRNHTSWNVMLAGYIKAGE 218
Query: 480 LQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSS 539
L++A+R F M ++ VSW+TMI+ A +G S F +++ G+ PNE + +LS+
Sbjct: 219 LESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSA 278
Query: 540 CSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTAR 599
CS SG G ++ + + + ++D+ R GN+ A+ E M
Sbjct: 279 CSQSGSFEFG-KILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIV 337
Query: 600 IWGSLLTA 607
W S++
Sbjct: 338 SWTSMIAG 345
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 108/251 (43%), Gaps = 23/251 (9%)
Query: 332 INLLPSCSKFGTLLEGKCIHGYAIR------KMFLPHLVLETALVDMYGKCGQLKFAECV 385
++LL SC L + IHG I+ F L+L A+ L +A +
Sbjct: 9 LSLLNSCKNLRALTQ---IHGLFIKYGVDTDSYFTGKLILHCAI----SISDALPYARRL 61
Query: 386 FGRINEKNMVSWNAIIAAYVQNGRNEEALELF-HCLRNQTLKPDAVTIASILPAYAELAT 444
E + +N ++ Y ++ ++ +F +R + PD+ + A ++ A +
Sbjct: 62 LLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRS 121
Query: 445 VSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMA 504
+ Q+H K L S+ F ++ MY CG ++ AR+ FD M NLV+WN +I A
Sbjct: 122 LRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITA 181
Query: 505 YAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDY 564
+ ++F +M + N +++ +L+ +G + +F+ M ++ +
Sbjct: 182 CFRGNDVAGAREIFDKM----LVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSW 237
Query: 565 -----GIEHYG 570
GI H G
Sbjct: 238 STMIVGIAHNG 248
>AT1G06140.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:1864796-1866472 FORWARD
Length = 558
Score = 330 bits (845), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 185/529 (34%), Positives = 302/529 (57%), Gaps = 9/529 (1%)
Query: 146 KKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPL--RDLVSWNCMVNGYR 203
++VH K+I G + ++ + +SL + Y + ++ A F +P R+ SWN +++GY
Sbjct: 24 QQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWKRNRHSWNTILSGYS 83
Query: 204 VIGDGLKS--LMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELD 261
S L+ + M + D +++ ++ C + G IH ++NGL+ D
Sbjct: 84 KSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGILIHGLAMKNGLDKD 143
Query: 262 IMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQE 321
V SL++MYA+ G ++ A++VF+E+ +N V W ++ GY E F M++
Sbjct: 144 DYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRD 203
Query: 322 DNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHL-VLETALVDMYGKCGQLK 380
L DA+T+I L+ +C GKC+HG +IR+ F+ L+ +++DMY KC L
Sbjct: 204 TGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLD 263
Query: 381 FAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYA 440
A +F ++N+V W +I+ + + R EA +LF + +++ P+ T+A+IL + +
Sbjct: 264 NARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCS 323
Query: 441 ELATVSECKQIHAYITK--LELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSW 498
L ++ K +H Y+ + +E+ + FTS + MYA+CG++Q AR FD M +N++SW
Sbjct: 324 SLGSLRHGKSVHGYMIRNGIEMDAVNFTS--FIDMYARCGNIQMARTVFDMMPERNVISW 381
Query: 499 NTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKM 558
++MI A+ I+G ++ F +MK + PN TFVSLLS+CS SG V EGW+ F SM
Sbjct: 382 SSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTR 441
Query: 559 DYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTASRNNNDIFFAE 618
DY + EHY CMVDLLGR G + AK FI+ MP+ P A WG+LL+A R + ++ A
Sbjct: 442 DYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAG 501
Query: 619 FAAKHILSHDNDNTGCYVLLANMYAEAGRWEDVEQIKLVMKKKGLAKTV 667
A+ +LS + + + YVLL+N+YA+AG WE V ++ M KG K V
Sbjct: 502 EIAEKLLSMEPEKSSVYVLLSNIYADAGMWEMVNCVRRKMGIKGYRKHV 550
Score = 248 bits (634), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 158/513 (30%), Positives = 266/513 (51%), Gaps = 22/513 (4%)
Query: 70 FVDSGAMDNALYLFEKMN--QPDTYIWNVIIRGFSNKGL--FQEVIDFYHRMEYEGIGID 125
++ S +D A F ++ + + + WN I+ G+S + +V+ Y+RM G+D
Sbjct: 49 YIQSNRLDFATSSFNRIPCWKRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVD 108
Query: 126 NFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFE 185
+F F IKAC L G +HG +K GLD+D YV SL++MY + G +E A+KVF+
Sbjct: 109 SFNLVFAIKACVGLGLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFD 168
Query: 186 AMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRG 245
+P+R+ V W ++ GY + F M G D L++I + C +
Sbjct: 169 EIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKV 228
Query: 246 GKEIHCQVIRNG-LELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYA 304
GK +H IR ++ +Q S+IDMY KC +D A ++F +N+V W +I G+A
Sbjct: 229 GKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFA 288
Query: 305 INGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLV 364
+E+F ++M ++++P+ T+ +L SCS G+L GK +HGY IR V
Sbjct: 289 KCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAV 348
Query: 365 LETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQT 424
T+ +DMY +CG ++ A VF + E+N++SW+++I A+ NG EEAL+ FH +++Q
Sbjct: 349 NFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQN 408
Query: 425 LKPDAVTIASILPAYAELATVSE-CKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTA 483
+ P++VT S+L A + V E KQ + + +V + + G++ A
Sbjct: 409 VVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEA 468
Query: 484 RRYFDSMSFKNLVS-WNTMIMAYAIHG----FGTISIQLFSRMKQNGIEPNESTFVSLLS 538
+ + D+M K + S W ++ A IH G I+ +L S +EP +S+ LLS
Sbjct: 469 KSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIAEKLLS------MEPEKSSVYVLLS 522
Query: 539 SC-SISGLVNEGWELFNSMKMDYNIDYGIEHYG 570
+ + +G+ WE+ N ++ I +H G
Sbjct: 523 NIYADAGM----WEMVNCVRRKMGIKGYRKHVG 551
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 99/211 (46%), Gaps = 4/211 (1%)
Query: 334 LLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRIN--E 391
LL S+ TL + +H I F +VL ++L + Y + +L FA F RI +
Sbjct: 10 LLTILSQAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWK 69
Query: 392 KNMVSWNAIIAAYVQNGR--NEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECK 449
+N SWN I++ Y ++ + L L++ +R D+ + + A L +
Sbjct: 70 RNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGI 129
Query: 450 QIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHG 509
IH K L + + + ++V MYA+ G +++A++ FD + +N V W ++ Y +
Sbjct: 130 LIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYS 189
Query: 510 FGTISIQLFSRMKQNGIEPNESTFVSLLSSC 540
+LF M+ G+ + T + L+ +C
Sbjct: 190 KDPEVFRLFCLMRDTGLALDALTLICLVKAC 220
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/156 (21%), Positives = 79/156 (50%), Gaps = 6/156 (3%)
Query: 53 RGMIKPNSLSLTRSLCEFVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVID 112
R I+ ++++ T + + G + A +F+ M + + W+ +I F GLF+E +D
Sbjct: 340 RNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALD 399
Query: 113 FYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIK---IGLDRDIYVCNSLID 169
+H+M+ + + ++ TF ++ AC + EG K + + + + + Y C ++D
Sbjct: 400 CFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYAC--MVD 457
Query: 170 MYFKFGFVEVAEKVFEAMPLRDLVS-WNCMVNGYRV 204
+ + G + A+ + MP++ + S W +++ R+
Sbjct: 458 LLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRI 493
>AT5G44230.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:17814336-17816309 FORWARD
Length = 657
Score = 330 bits (845), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 211/613 (34%), Positives = 317/613 (51%), Gaps = 46/613 (7%)
Query: 229 SMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCG-KVD-YAERVFN 286
S+IS L C + K+IH V+R GL+ + T LI K G +D YA RV
Sbjct: 51 SLISKLDDC---INLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIE 107
Query: 287 EMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLE 346
+ +N W A+I GYAI G F E+ M+++ + P + T LL +C L
Sbjct: 108 PVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNL 167
Query: 347 GKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYV- 405
G+ H R + + ++DMY KC + A VF + E++++SW +IAAY
Sbjct: 168 GRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYAR 227
Query: 406 ------------------------------QNGRNEEALELFHCLRNQTLKPDAVTIASI 435
QN + +EALE F + ++ D VT+A
Sbjct: 228 VGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGY 287
Query: 436 LPAYAELAT---VSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSF 492
+ A A+L QI A + S + +A++ MY+KCG+++ A F SM+
Sbjct: 288 ISACAQLGASKYADRAVQI-AQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNN 346
Query: 493 KNLVSWNTMIMAYAIHGFGTISIQLFSRM-KQNGIEPNESTFVSLLSSCSISGLVNEGWE 551
KN+ ++++MI+ A HG ++ LF M Q I+PN TFV L +CS SGLV++G +
Sbjct: 347 KNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQ 406
Query: 552 LFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTASRNN 611
+F+SM + + +HY CMVDLLGRTG L A + I+ M + P +WG+LL A R +
Sbjct: 407 VFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIH 466
Query: 612 NDIFFAEFAAKHILSHDNDNTGCYVLLANMYAEAGRWEDVEQIKLVMKKKGLAKTVDCC- 670
N+ AE AA+H+ + D G Y+LL+N+YA AG W V +++ ++K+KGL KT
Sbjct: 467 NNPEIAEIAAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSW 526
Query: 671 TVESKGKSQKFINNNKSHQQAYMIYDVLDIILKKIGEDVYIHSLSKFRPADVI--KKKMK 728
V+ G+ KF N +H + I D L+ +++++ Y LS P DV K++
Sbjct: 527 VVDKNGQMHKFFPGNLNHPMSNKIQDKLEELVERLTVLGYQPDLSSV-PYDVSDNAKRLI 585
Query: 729 SPQNHSVKLAICFGLISTAIGKPIIIRKNTRICKDCHIAAKKISRVTKREIIVGDSKIFH 788
Q H+ KLA+ F L++T I I KN R+C DCH + S VT + II+ D+ FH
Sbjct: 586 LIQ-HTEKLALAFSLLTTNRDSTITIMKNLRMCLDCHKFMRLASEVTGKVIIMRDNMRFH 644
Query: 789 HFEDGRCSCGDYW 801
HF G CSCGD+W
Sbjct: 645 HFRSGDCSCGDFW 657
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 105/403 (26%), Positives = 185/403 (45%), Gaps = 42/403 (10%)
Query: 146 KKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFV--EVAEKVFEAMPLRDLVSWNCMVNGYR 203
K++HG +++ GLD+ Y+ LI K G A +V E + R+ W ++ GY
Sbjct: 66 KQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWTAVIRGYA 125
Query: 204 VIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIM 263
+ G +++ + M P + + L C + G++ H Q R +
Sbjct: 126 IEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGFCFVY 185
Query: 264 VQTSLIDMYAKCGKVDYAERVFNEM-------------------------------TCKN 292
V ++IDMY KC +D A +VF+EM K+
Sbjct: 186 VGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTKD 245
Query: 293 IVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHG 352
+VAW AM+ G+A N E+ RM++ + D +T+ + +C++ G
Sbjct: 246 MVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQ 305
Query: 353 YAIRKMFLP--HLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRN 410
A + + P H+V+ +AL+DMY KCG ++ A VF +N KN+ +++++I +GR
Sbjct: 306 IAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRA 365
Query: 411 EEALELFHCLRNQT-LKPDAVTIASILPAYAELATVSECKQIHAYITK---LELSSNTFT 466
+EAL LFH + QT +KP+ VT L A + V + +Q+ + + ++ + + +T
Sbjct: 366 QEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYT 425
Query: 467 SNAIVYMYAKCGDLQTARRYFDSMSFKNLVS-WNTMIMAYAIH 508
+V + + G LQ A +MS + W ++ A IH
Sbjct: 426 --CMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIH 466
Score = 132 bits (332), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/361 (25%), Positives = 168/361 (46%), Gaps = 36/361 (9%)
Query: 79 ALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGR 138
A + E + + ++W +IRG++ +G F E I Y M E I +FTF ++KACG
Sbjct: 102 ARRVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGT 161
Query: 139 LLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFK------------------------- 173
+ G++ H + ++ +YV N++IDMY K
Sbjct: 162 MKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTEL 221
Query: 174 ------FGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDR 227
G +E A ++FE++P +D+V+W MV G+ ++L F M G + D
Sbjct: 222 IAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADE 281
Query: 228 LSMISSLGGCS-IGCCVRGGKEIHCQVIRNGLELD-IMVQTSLIDMYAKCGKVDYAERVF 285
+++ + C+ +G + + D +++ ++LIDMY+KCG V+ A VF
Sbjct: 282 VTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVF 341
Query: 286 NEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRM-QEDNLIPDAITMINLLPSCSKFGTL 344
M KN+ +++MI G A +G E+ M + + P+ +T + L +CS G +
Sbjct: 342 MSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLV 401
Query: 345 LEGKCIHGYAIRKMFL-PHLVLETALVDMYGKCGQLKFA-ECVFGRINEKNMVSWNAIIA 402
+G+ + + + P T +VD+ G+ G+L+ A E + E + W A++
Sbjct: 402 DQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLG 461
Query: 403 A 403
A
Sbjct: 462 A 462
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 144/309 (46%), Gaps = 12/309 (3%)
Query: 44 KKQMSETPKRGMIKPNSLSLTRSLCEFVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSN 103
+K E P+R +I S T + + G M+ A LFE + D W ++ GF+
Sbjct: 204 RKVFDEMPERDVI-----SWTELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQ 258
Query: 104 KGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYV 163
QE ++++ RME GI D T I AC +L + + K G +V
Sbjct: 259 NAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHV 318
Query: 164 C--NSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGL 221
++LIDMY K G VE A VF +M +++ +++ M+ G G ++L F M+
Sbjct: 319 VIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQ 378
Query: 222 GE-KPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRN-GLELDIMVQTSLIDMYAKCGKVD 279
E KP+ ++ + +L CS V G+++ + + G++ T ++D+ + G++
Sbjct: 379 TEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQ 438
Query: 280 YAERVFNEMTCK-NIVAWNAMIGGYAINGHFLESFTCLKRM--QEDNLIPDAITMINLLP 336
A + M+ + + W A++G I+ + + + + E ++I + I + N+
Sbjct: 439 EALELIKTMSVEPHGGVWGALLGACRIHNNPEIAEIAAEHLFELEPDIIGNYILLSNVYA 498
Query: 337 SCSKFGTLL 345
S +G +L
Sbjct: 499 SAGDWGGVL 507
>AT3G47840.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:17651912-17654032 FORWARD
Length = 706
Score = 329 bits (844), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 192/661 (29%), Positives = 326/661 (49%), Gaps = 5/661 (0%)
Query: 42 PTKKQMSETPKRGMIKPNSLSLTRSLCEFVDSGAMDNALYLFEKMNQPDTYIWNVIIRGF 101
P ++ + + M+K + S RSL +++G + A +F+KM D W II+ +
Sbjct: 25 PVEENIVRISNQVMVKFDPNSHLRSL---INAGNLRAARQVFDKMPHGDIVSWTSIIKRY 81
Query: 102 SNKGLFQEVIDFYHRMEY--EGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDR 159
E + + M + D V+KACG+ + G+ +H +K L
Sbjct: 82 VTANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLS 141
Query: 160 DIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEML 219
+YV +SL+DMY + G ++ + +VF MP R+ V+W ++ G G + L F EM
Sbjct: 142 SVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMS 201
Query: 220 GLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVD 279
E D + +L C+ V+ GK IH VI G + V SL MY +CG++
Sbjct: 202 RSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQ 261
Query: 280 YAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCS 339
+F M+ +++V+W ++I Y G +++ +M+ + P+ T ++ +C+
Sbjct: 262 DGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACA 321
Query: 340 KFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNA 399
L+ G+ +H + L + +++ MY CG L A +F + ++++SW+
Sbjct: 322 SLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWST 381
Query: 400 IIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLE 459
II Y Q G EE + F +R KP +AS+L +A + +Q+HA
Sbjct: 382 IIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFG 441
Query: 460 LSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFS 519
L N+ ++++ MY+KCG ++ A F ++VS MI YA HG +I LF
Sbjct: 442 LEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFE 501
Query: 520 RMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRT 579
+ + G P+ TF+S+L++C+ SG ++ G+ FN M+ YN+ EHYGCMVDLL R
Sbjct: 502 KSLKVGFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRA 561
Query: 580 GNLDAAKQFIEEMPLVPTARIWGSLLTASRNNNDIFFAEFAAKHILSHDNDNTGCYVLLA 639
G L A++ I EM +W +LL A + DI AA+ IL D V LA
Sbjct: 562 GRLSDAEKMINEMSWKKDDVVWTTLLIACKAKGDIERGRRAAERILELDPTCATALVTLA 621
Query: 640 NMYAEAGRWEDVEQIKLVMKKKGLAKTVDCCTVESKGKSQKFINNNKSHQQAYMIYDVLD 699
N+Y+ G E+ ++ MK KG+ K +++ K F++ ++ H Q+ IY++L+
Sbjct: 622 NIYSSTGNLEEAANVRKNMKAKGVIKEPGWSSIKIKDCVSAFVSGDRFHPQSEDIYNILE 681
Query: 700 I 700
+
Sbjct: 682 L 682
>AT2G17210.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:7485398-7487602 REVERSE
Length = 715
Score = 328 bits (841), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 198/635 (31%), Positives = 344/635 (54%), Gaps = 13/635 (2%)
Query: 70 FVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTF 129
++ G + + L F+ MN D+ WNVI+ G + G +E + ++ ++ G + T
Sbjct: 71 YMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFEPNTSTL 130
Query: 130 PFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPL 189
VI AC L + +G+K+HG +I+ G V NS++ MY + A K+F+ M
Sbjct: 131 VLVIHACRSL--WFDGEKIHGYVIRSGFCGISSVQNSILCMYADSDSLS-ARKLFDEMSE 187
Query: 190 RDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGE-KPDRLSMISSLGGCSIGCCVRGGKE 248
RD++SW+ ++ Y + + L FKEM+ + +PD +++ S L C++ + G+
Sbjct: 188 RDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRS 247
Query: 249 IHCQVIRNGLEL-DIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAING 307
+H IR G +L D+ V SLIDMY+K VD A RVF+E TC+NIV+WN+++ G+ N
Sbjct: 248 VHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQ 307
Query: 308 HFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLET 367
+ E+ M ++ + D +T+++LL C F L K IHG IR+ + + V +
Sbjct: 308 RYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALS 367
Query: 368 ALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKP 427
+L+D Y C + A V + K++VS + +I+ GR++EA+ +F +R+ P
Sbjct: 368 SLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRDT---P 424
Query: 428 DAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFT-SNAIVYMYAKCGDLQTARRY 486
+A+T+ S+L A + A + K H + L+ N + +IV YAKCG ++ ARR
Sbjct: 425 NAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRT 484
Query: 487 FDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLV 546
FD ++ KN++SW +I AYAI+G ++ LF MKQ G PN T+++ LS+C+ GLV
Sbjct: 485 FDQITEKNIISWTVIISAYAINGLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLV 544
Query: 547 NEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMP--LVPTARIWGSL 604
+G +F SM ++ + ++HY C+VD+L R G +D A + I+ +P + A WG++
Sbjct: 545 KKGLMIFKSM-VEEDHKPSLQHYSCIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAI 603
Query: 605 LTASRNN-NDIFFAEFAAKHILSHDNDNTGCYVLLANMYAEAGRWEDVEQIKLVMKKKGL 663
L+ RN + +L + + Y+L ++ +A WEDV ++ ++K++ +
Sbjct: 604 LSGCRNRFKKLIITSEVVAEVLELEPLCSSGYLLASSTFAAEKSWEDVAMMRRLVKERKV 663
Query: 664 AKTVDCCTVESKGKSQKFINNNKSHQQAYMIYDVL 698
V +++F+ +K Q + DV+
Sbjct: 664 RVVAGYSMVREGNLAKRFLAGDKLSQSDSELNDVV 698
Score = 207 bits (528), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 144/499 (28%), Positives = 247/499 (49%), Gaps = 30/499 (6%)
Query: 98 IRGFSNKGLFQEVIDFYHRMEYEGIGI-DNFTFPFVIKACGRLLSFIEGKKVHGKLIKIG 156
I+ S G ++EV+ Y ++ G+ D F FP V KAC +L +G
Sbjct: 16 IKQASVSGKWREVVSGYSEIQRAGVQFNDPFVFPIVFKACAKLSWLFQG----------- 64
Query: 157 LDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFK 216
NS+ D Y K G + + F+ M RD VSWN +V G G + L F
Sbjct: 65 --------NSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFS 116
Query: 217 EMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCG 276
++ G +P+ +++ + C G++IH VIR+G VQ S++ MYA
Sbjct: 117 KLRVWGFEPNTSTLVLVIHACR--SLWFDGEKIHGYVIRSGFCGISSVQNSILCMYADSD 174
Query: 277 KVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRM-QEDNLIPDAITMINLL 335
+ A ++F+EM+ +++++W+ +I Y + + K M E PD +T+ ++L
Sbjct: 175 SLS-ARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVL 233
Query: 336 PSCSKFGTLLEGKCIHGYAIRKMF-LPHLVLETALVDMYGKCGQLKFAECVFGRINEKNM 394
+C+ + G+ +HG++IR+ F L + + +L+DMY K + A VF +N+
Sbjct: 234 KACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNI 293
Query: 395 VSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAY 454
VSWN+I+A +V N R +EALE+FH + + ++ D VT+ S+L CK IH
Sbjct: 294 VSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGV 353
Query: 455 ITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTIS 514
I + SN ++++ Y C + A DSM++K++VS +TMI A G +
Sbjct: 354 IIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEA 413
Query: 515 IQLFSRMKQNGIEPNESTFVSLLSSCSISG-LVNEGWELFNSMKMDYNIDYGIEHYGCMV 573
I +F M+ PN T +SLL++CS+S L W +++ I+ I +V
Sbjct: 414 ISIFCHMRDT---PNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAIN-DISVGTSIV 469
Query: 574 DLLGRTGNLDAAKQFIEEM 592
D + G ++ A++ +++
Sbjct: 470 DAYAKCGAIEMARRTFDQI 488
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 144/328 (43%), Gaps = 31/328 (9%)
Query: 290 CKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNL-IPDAITMINLLPSCSKFGTLLEGK 348
C + A ++ I +++G + E + +Q + D + +C+K L +G
Sbjct: 6 CSKLQALSSKIKQASVSGKWREVVSGYSEIQRAGVQFNDPFVFPIVFKACAKLSWLFQGN 65
Query: 349 CIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNG 408
I D Y KCG L F +N ++ VSWN I+ + G
Sbjct: 66 SI-------------------ADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYG 106
Query: 409 RNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSN 468
EE L F LR +P+ T+ ++ A L E +IH Y+ + + N
Sbjct: 107 FEEEGLWWFSKLRVWGFEPNTSTLVLVIHACRSLWFDGE--KIHGYVIRSGFCGISSVQN 164
Query: 469 AIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNG-IE 527
+I+ MYA L +AR+ FD MS ++++SW+ +I +Y + ++LF M E
Sbjct: 165 SILCMYADSDSL-SARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTE 223
Query: 528 PNESTFVSLLSSCSISGLVNEGWELFN-SMKMDYNIDYGIEHYGC--MVDLLGRTGNLDA 584
P+ T S+L +C++ ++ G + S++ +++ + + C ++D+ + ++D+
Sbjct: 224 PDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDL---ADVFVCNSLIDMYSKGFDVDS 280
Query: 585 AKQFIEEMPLVPTARIWGSLLTASRNNN 612
A + +E W S+L +N
Sbjct: 281 AFRVFDETTCRNIVS-WNSILAGFVHNQ 307
>AT3G47530.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:17517382-17519157 REVERSE
Length = 591
Score = 328 bits (840), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 188/530 (35%), Positives = 288/530 (54%), Gaps = 6/530 (1%)
Query: 278 VDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIP-DAITMINLLP 336
++Y+ RVF++ + N MI ++++ E F + ++ ++ +P + ++ L
Sbjct: 62 INYSCRVFSQRLNPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALK 121
Query: 337 SCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVS 396
C K G LL G IHG FL +L T L+D+Y C A VF I +++ VS
Sbjct: 122 CCIKSGDLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVS 181
Query: 397 WNAIIAAYVQNGRNEEALELFHCLRNQT---LKPDAVTIASILPAYAELATVSECKQIHA 453
WN + + Y++N R + L LF ++N +KPD VT L A A L + KQ+H
Sbjct: 182 WNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHD 241
Query: 454 YITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTI 513
+I + LS SN +V MY++CG + A + F M +N+VSW +I A++GFG
Sbjct: 242 FIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKE 301
Query: 514 SIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKM-DYNIDYGIEHYGCM 572
+I+ F+ M + GI P E T LLS+CS SGLV EG F+ M+ ++ I + HYGC+
Sbjct: 302 AIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCV 361
Query: 573 VDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTASRNNNDIFFAEFAAKHILSHDNDNT 632
VDLLGR LD A I+ M + P + IW +LL A R + D+ E H++ +
Sbjct: 362 VDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEA 421
Query: 633 GCYVLLANMYAEAGRWEDVEQIKLVMKKKGLAKTVDCCTVESKGKSQKFINNNKSHQQAY 692
G YVLL N Y+ G+WE V +++ +MK+K + C +E +G +FI ++ SH +
Sbjct: 422 GDYVLLLNTYSTVGKWEKVTELRSLMKEKRIHTKPGCSAIELQGTVHEFIVDDVSHPRKE 481
Query: 693 MIYDVLDIILKKIGEDVYIHSL-SKFRPADVIKKKMKSPQNHSVKLAICFGLISTAIGKP 751
IY +L I +++ Y+ + S+ + ++K + + HS KLAI FG++ T G
Sbjct: 482 EIYKMLAEINQQLKIAGYVAEITSELHNLESEEEKGYALRYHSEKLAIAFGILVTPPGTT 541
Query: 752 IIIRKNTRICKDCHIAAKKISRVTKREIIVGDSKIFHHFEDGRCSCGDYW 801
I + KN R C DCH AK +S V R +IV D FHHF+ G CSC D+W
Sbjct: 542 IRVTKNLRTCVDCHNFAKFVSDVYDRIVIVRDRSRFHHFKGGSCSCNDFW 591
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 153/337 (45%), Gaps = 7/337 (2%)
Query: 82 LFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEY-EGIGIDNFTFPFVIKACGRLL 140
+F + P N +IR FS E + + + + + F +K C +
Sbjct: 68 VFSQRLNPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSG 127
Query: 141 SFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVN 200
+ G ++HGK+ G D + +L+D+Y A KVF+ +P RD VSWN + +
Sbjct: 128 DLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFS 187
Query: 201 GYRVIGDGLKSLMCFKEMLGLGE---KPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNG 257
Y L+ F +M + KPD ++ + +L C+ + GK++H + NG
Sbjct: 188 CYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENG 247
Query: 258 LELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLK 317
L + + +L+ MY++CG +D A +VF M +N+V+W A+I G A+NG E+
Sbjct: 248 LSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFN 307
Query: 318 RMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMF--LPHLVLETALVDMYGK 375
M + + P+ T+ LL +CS G + EG F P+L +VD+ G+
Sbjct: 308 EMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGR 367
Query: 376 CGQLKFAECVFGRINEK-NMVSWNAIIAAYVQNGRNE 411
L A + + K + W ++ A +G E
Sbjct: 368 ARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVE 404
>AT3G14730.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4949385-4951346 REVERSE
Length = 653
Score = 327 bits (838), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 180/586 (30%), Positives = 324/586 (55%), Gaps = 8/586 (1%)
Query: 132 VIKACGRLLSFIEGKKVHGKLIKIG-LDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLR 190
++ C + ++ G+++HG +++ G LD SL++MY K G + A VF R
Sbjct: 66 TLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGGSE-R 124
Query: 191 DLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIH 250
D+ +N +++G+ V G L ++ ++EM G PD+ + S L G S + K++H
Sbjct: 125 DVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKG-SDAMELSDVKKVH 183
Query: 251 CQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKN-IVAWNAMIGGYAINGHF 309
+ G + D V + L+ Y+K V+ A++VF+E+ ++ V WNA++ GY+ F
Sbjct: 184 GLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRF 243
Query: 310 LESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETAL 369
++ +M+E+ + T+ ++L + + G + G+ IHG A++ +V+ AL
Sbjct: 244 EDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNAL 303
Query: 370 VDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDA 429
+DMYGK L+ A +F ++E+++ +WN+++ + G ++ L LF + ++PD
Sbjct: 304 IDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDI 363
Query: 430 VTIASILPAYAELATVSECKQIHAYITKLEL----SSNTFTSNAIVYMYAKCGDLQTARR 485
VT+ ++LP LA++ + ++IH Y+ L SSN F N+++ MY KCGDL+ AR
Sbjct: 364 VTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARM 423
Query: 486 YFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGL 545
FDSM K+ SWN MI Y + G +++ +FS M + G++P+E TFV LL +CS SG
Sbjct: 424 VFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGF 483
Query: 546 VNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLL 605
+NEG M+ YNI +HY C++D+LGR L+ A + P+ +W S+L
Sbjct: 484 LNEGRNFLAQMETVYNILPTSDHYACVIDMLGRADKLEEAYELAISKPICDNPVVWRSIL 543
Query: 606 TASRNNNDIFFAEFAAKHILSHDNDNTGCYVLLANMYAEAGRWEDVEQIKLVMKKKGLAK 665
++ R + + A A K + + ++ G YVL++N+Y EAG++E+V ++ M+++ + K
Sbjct: 544 SSCRLHGNKDLALVAGKRLHELEPEHCGGYVLMSNVYVEAGKYEEVLDVRDAMRQQNVKK 603
Query: 666 TVDCCTVESKGKSQKFINNNKSHQQAYMIYDVLDIILKKIGEDVYI 711
T C + K F N++H + I+D L +++ + Y+
Sbjct: 604 TPGCSWIVLKNGVHTFFTGNQTHPEFKSIHDWLSLVISHMHGHEYM 649
Score = 213 bits (542), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 149/546 (27%), Positives = 263/546 (48%), Gaps = 27/546 (4%)
Query: 23 QMGAPKRDLLVNPRIRKSNPTKKQMSETPKRGMIKPNSLSLTRSLCEFVDSGAMDNALYL 82
Q A ++D + +I K + ++P+ G T + + G M A+ +
Sbjct: 68 QRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAG---------TSLVNMYAKCGLMRRAVLV 118
Query: 83 FEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLSF 142
F ++ D + +N +I GF G + ++ Y M GI D +TFP ++K +
Sbjct: 119 FGG-SERDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKG-SDAMEL 176
Query: 143 IEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLR-DLVSWNCMVNG 201
+ KKVHG K+G D D YV + L+ Y KF VE A+KVF+ +P R D V WN +VNG
Sbjct: 177 SDVKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNG 236
Query: 202 YRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELD 261
Y I +L+ F +M G R ++ S L ++ + G+ IH ++ G D
Sbjct: 237 YSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSD 296
Query: 262 IMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQE 321
I+V +LIDMY K ++ A +F M +++ WN+++ + G + +RM
Sbjct: 297 IVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLC 356
Query: 322 DNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFL----PHLVLETALVDMYGKCG 377
+ PD +T+ +LP+C + +L +G+ IHGY I L + + +L+DMY KCG
Sbjct: 357 SGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCG 416
Query: 378 QLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILP 437
L+ A VF + K+ SWN +I Y E AL++F C+ +KPD +T +L
Sbjct: 417 DLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQ 476
Query: 438 AYAELATVSECKQIHAYITKLELSSNTFTSN----AIVYMYAKCGDLQTARRYFDSMSF- 492
A + ++E + ++ ++E N ++ ++ M + L+ A S
Sbjct: 477 ACSHSGFLNEGRN---FLAQMETVYNILPTSDHYACVIDMLGRADKLEEAYELAISKPIC 533
Query: 493 KNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSI-SGLVNEGWE 551
N V W +++ + +HG +++ R+ + +EP L+S+ + +G E +
Sbjct: 534 DNPVVWRSILSSCRLHGNKDLALVAGKRLHE--LEPEHCGGYVLMSNVYVEAGKYEEVLD 591
Query: 552 LFNSMK 557
+ ++M+
Sbjct: 592 VRDAMR 597
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 149/279 (53%), Gaps = 11/279 (3%)
Query: 317 KRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLE-TALVDMYGK 375
KR + N+ T I L C++ + G+ IHG+ +RK FL T+LV+MY K
Sbjct: 53 KRYEHHNVA----TCIATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAK 108
Query: 376 CGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASI 435
CG ++ A VFG +E+++ +NA+I+ +V NG +A+E + +R + PD T S+
Sbjct: 109 CGLMRRAVLVFGG-SERDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSL 167
Query: 436 LPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFK-N 494
L ++ +S+ K++H KL S+ + + +V Y+K ++ A++ FD + + +
Sbjct: 168 LKG-SDAMELSDVKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDD 226
Query: 495 LVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFN 554
V WN ++ Y+ ++ +FS+M++ G+ + T S+LS+ ++SG ++ G +
Sbjct: 227 SVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHG 286
Query: 555 -SMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEM 592
++K D + + ++D+ G++ L+ A E M
Sbjct: 287 LAVKTGSGSDIVVSN--ALIDMYGKSKWLEEANSIFEAM 323
>AT4G16835.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:9473021-9474803 FORWARD
Length = 575
Score = 326 bits (835), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 200/552 (36%), Positives = 299/552 (54%), Gaps = 20/552 (3%)
Query: 259 ELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKR 318
E D ++ Y + + A+ F+ M K+ +WN MI GYA G ++
Sbjct: 35 EPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYS 94
Query: 319 MQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQ 378
M E N + MI+ C K H + + + +V TA++ Y K +
Sbjct: 95 MMEKNEV-SWNAMISGYIECGDLE-----KASHFFKVAP--VRGVVAWTAMITGYMKAKK 146
Query: 379 LKFAECVFGRIN-EKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILP 437
++ AE +F + KN+V+WNA+I+ YV+N R E+ L+LF + + ++P++ ++S L
Sbjct: 147 VELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALL 206
Query: 438 AYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVS 497
+EL+ + +QIH ++K L ++ +++ MY KCG+L A + F+ M K++V+
Sbjct: 207 GCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVA 266
Query: 498 WNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMK 557
WN MI YA HG ++ LF M N I P+ TFV++L +C+ +GLVN G F SM
Sbjct: 267 WNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMV 326
Query: 558 MDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTASRNNNDIFFA 617
DY ++ +HY CMVDLLGR G L+ A + I MP P A ++G+LL A R + ++ A
Sbjct: 327 RDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELA 386
Query: 618 EFAAKHILSHDNDNTGCYVLLANMYAEAGRWEDVEQIKLVMKKKGLAKTVDCCTVESKGK 677
EFAA+ +L ++ N YV LAN+YA RWEDV +++ MK+ + K V+ G
Sbjct: 387 EFAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVE---RVKVPGY 443
Query: 678 SQKFINNNKSH-QQAYMIYDVLDIILKKIGEDVYIHSLSKFRPADVI-------KKKMKS 729
S I N H + + I+ LD I KK+ E L+ ++P ++K K
Sbjct: 444 SWIEIRNKVHHFRSSDRIHPELDSIHKKLKELEKKMKLAGYKPELEFALHNVEEEQKEKL 503
Query: 730 PQNHSVKLAICFGLISTAIGKPIIIRKNTRICKDCHIAAKKISRVTKREIIVGDSKIFHH 789
HS KLA+ FG I G I + KN RIC DCH A K IS + KREIIV D+ FHH
Sbjct: 504 LLWHSEKLAVAFGCIKLPQGSQIQVFKNLRICGDCHKAIKFISEIEKREIIVRDTTRFHH 563
Query: 790 FEDGRCSCGDYW 801
F+DG CSCGDYW
Sbjct: 564 FKDGSCSCGDYW 575
Score = 145 bits (367), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 99/329 (30%), Positives = 169/329 (51%), Gaps = 12/329 (3%)
Query: 57 KPNSLSLTRSLCEFVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVID-FYH 115
+P++ S L +V + + A F++M D WN +I G++ +G ++ + FY
Sbjct: 35 EPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYS 94
Query: 116 RMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFG 175
ME + + ++ CG L K H K+ R + ++I Y K
Sbjct: 95 MMEKNEVSWNAMISGYI--ECGDL-----EKASH--FFKVAPVRGVVAWTAMITGYMKAK 145
Query: 176 FVEVAEKVFEAMPL-RDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSL 234
VE+AE +F+ M + ++LV+WN M++GY L F+ ML G +P+ + S+L
Sbjct: 146 KVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSAL 205
Query: 235 GGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIV 294
GCS ++ G++IH V ++ L D+ TSLI MY KCG++ A ++F M K++V
Sbjct: 206 LGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVV 265
Query: 295 AWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYA 354
AWNAMI GYA +G+ ++ + M ++ + PD IT + +L +C+ G + G
Sbjct: 266 AWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESM 325
Query: 355 IRKMFL-PHLVLETALVDMYGKCGQLKFA 382
+R + P T +VD+ G+ G+L+ A
Sbjct: 326 VRDYKVEPQPDHYTCMVDLLGRAGKLEEA 354
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 80/192 (41%), Gaps = 40/192 (20%)
Query: 382 AECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAE 441
A +F I E + S+N +++ YV+N E+A F ++ DA + +++ YA
Sbjct: 26 AHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFF----DRMPFKDAASWNTMITGYAR 81
Query: 442 LATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYF-------------- 487
+ + +++ + + N + NA++ Y +CGDL+ A +F
Sbjct: 82 RGEMEKARELFYSM----MEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTAM 137
Query: 488 ------------------DSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPN 529
D KNLV+WN MI Y + ++LF M + GI PN
Sbjct: 138 ITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPN 197
Query: 530 ESTFVSLLSSCS 541
S S L CS
Sbjct: 198 SSGLSSALLGCS 209
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 66/160 (41%), Gaps = 27/160 (16%)
Query: 45 KQMSETPKRGMIKPNSLSLTRSLCEFVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNK 104
+Q+ + + + + +LT + + G + +A LFE M + D WN +I G++
Sbjct: 218 RQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQH 277
Query: 105 GLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGL------- 157
G + + + M I D TF V+ AC H L+ IG+
Sbjct: 278 GNADKALCLFREMIDNKIRPDWITFVAVLLACN-----------HAGLVNIGMAYFESMV 326
Query: 158 -------DRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLR 190
D Y C ++D+ + G +E A K+ +MP R
Sbjct: 327 RDYKVEPQPDHYTC--MVDLLGRAGKLEEALKLIRSMPFR 364
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | EMB175 (EMBRYO
DEFECTIVE 175); catalytic | chr5:1010894-1013584 REVERSE
Length = 896
Score = 325 bits (834), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 230/776 (29%), Positives = 383/776 (49%), Gaps = 47/776 (6%)
Query: 70 FVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDN-FT 128
++ G A+ +F ++ P + +I GFS L E + + RM G+ N +T
Sbjct: 124 YLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYT 183
Query: 129 FPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAE--KVFEA 186
F ++ AC R+ F G ++HG ++K G ++V NSL+ +Y K + K+F+
Sbjct: 184 FVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLKLFDE 243
Query: 187 MPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGL-GEKPDRLSMISSLGGCSIGCCVRG 245
+P RD+ SWN +V+ G K+ F EM + G D ++ + L C+ +
Sbjct: 244 IPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLR 303
Query: 246 GKEIHCQVIRNGLELDIMVQTSLIDMYAKC------------------------------ 275
G+E+H + IR GL ++ V +LI Y+K
Sbjct: 304 GRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMS 363
Query: 276 -GKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINL 334
G VD A +F +T KN + +NA++ G+ NGH L++ M + + ++ +
Sbjct: 364 FGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSA 423
Query: 335 LPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGR--INEK 392
+ +C + IHG+ I+ + ++TAL+DM +C ++ AE +F + N
Sbjct: 424 VDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWPSNLD 483
Query: 393 NMVSWNAIIAAYVQNGRNEEALELFH-CLRNQTLKPDAVTIASILPAYAELATVSECKQI 451
+ + +II Y +NG ++A+ LFH L Q L D V++ IL L QI
Sbjct: 484 SSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQI 543
Query: 452 HAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFG 511
H Y K S+ N+++ MYAKC D A + F++M +++SWN++I Y + G
Sbjct: 544 HCYALKAGYFSDISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYILQRNG 603
Query: 512 TISIQLFSRMKQNGIEPNESTFVSLLSSC--SISGLVNEGWELFNSMKMDYNIDYGIEHY 569
++ L+SRM + I+P+ T ++S+ + S ++ +LF SMK Y+I+ EHY
Sbjct: 604 DEALALWSRMNEKEIKPDIITLTLVISAFRYTESNKLSSCRDLFLSMKTIYDIEPTTEHY 663
Query: 570 GCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTASRNNNDIFFAEFAAKHILSHDN 629
V +LG G L+ A+ I MP+ P + +LL + R +++ A+ AK ILS
Sbjct: 664 TAFVRVLGHWGLLEEAEDTINSMPVQPEVSVLRALLDSCRIHSNTSVAKRVAKLILSTKP 723
Query: 630 DNTGCYVLLANMYAEAGRWEDVEQIKLVMKKKGLAKTVDCCTVESKGKSQKFINNNKSHQ 689
+ Y+L +N+Y+ +G W E I+ M+++G K + + K F + SH
Sbjct: 724 ETPSEYILKSNIYSASGFWHRSEMIREEMRERGYRKHPAKSWIIHENKIHSFHARDTSHP 783
Query: 690 QAYMIYDVLDIILK---KIGEDVYIHSLSKFRPADVIKKKMKSPQNHSVKLAICFGLIST 746
Q IY L+I++ K+G + + + D KK +HS KLA+ +G++S+
Sbjct: 784 QEKDIYRGLEILIMECLKVGYEPNTEYV--LQEVDEFMKK-SFLFHHSAKLAVTYGILSS 840
Query: 747 AI-GKPIIIRKNTRICKDCHIAAKKISRVTKREIIVGDSKIFHHFEDGRCSCGDYW 801
GKP+ + KN +C DCH K IS V KREI++ DS FHHF +G+CSC D W
Sbjct: 841 NTRGKPVRVMKNVMLCGDCHEFFKYISVVVKREIVLRDSSGFHHFVNGKCSCRDLW 896
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 128/480 (26%), Positives = 235/480 (48%), Gaps = 41/480 (8%)
Query: 59 NSLSLTRSLCEFVD--SGAM-DNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYH 115
NS+ ++ SL D SG+ D+ L LF+++ Q D WN ++ +G + D ++
Sbjct: 214 NSVFVSNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFY 273
Query: 116 RM-EYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKF 174
M EG G+D+FT ++ +C + G+++HG+ I+IGL +++ V N+LI Y KF
Sbjct: 274 EMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKF 333
Query: 175 -------------------------------GFVEVAEKVFEAMPLRDLVSWNCMVNGYR 203
G V+ A ++F + ++ +++N ++ G+
Sbjct: 334 WDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFC 393
Query: 204 VIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIM 263
G GLK+L F +ML G + S+ S++ C + + ++IH I+ G +
Sbjct: 394 RNGHGLKALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPC 453
Query: 264 VQTSLIDMYAKCGKVDYAERVFNEMTCK--NIVAWNAMIGGYAINGHFLESFTCLKR-MQ 320
+QT+L+DM +C ++ AE +F++ + A ++IGGYA NG ++ + R +
Sbjct: 454 IQTALLDMCTRCERMADAEEMFDQWPSNLDSSKATTSIIGGYARNGLPDKAVSLFHRTLC 513
Query: 321 EDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLK 380
E L D +++ +L C G G IH YA++ + + L +L+ MY KC
Sbjct: 514 EQKLFLDEVSLTLILAVCGTLGFREMGYQIHCYALKAGYFSDISLGNSLISMYAKCCDSD 573
Query: 381 FAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPA-- 438
A +F + E +++SWN++I+ Y+ +EAL L+ + + +KPD +T+ ++ A
Sbjct: 574 DAIKIFNTMREHDVISWNSLISCYILQRNGDEALALWSRMNEKEIKPDIITLTLVISAFR 633
Query: 439 YAELATVSECKQIHAYI-TKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVS 497
Y E +S C+ + + T ++ T A V + G L+ A +SM + VS
Sbjct: 634 YTESNKLSSCRDLFLSMKTIYDIEPTTEHYTAFVRVLGHWGLLEEAEDTINSMPVQPEVS 693
Score = 130 bits (328), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 103/446 (23%), Positives = 197/446 (44%), Gaps = 41/446 (9%)
Query: 146 KKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVI 205
K VH +K+ + + N+LI Y K GF A VF ++ +VS+ +++G+ +
Sbjct: 100 KAVHASFLKLR-EEKTRLGNALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRL 158
Query: 206 GDGLKSLMCFKEMLGLG-EKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMV 264
+++L F M G +P+ + ++ L C G +IH ++++G + V
Sbjct: 159 NLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFV 218
Query: 265 QTSLIDMYAK--CGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQE- 321
SL+ +Y K D ++F+E+ +++ +WN ++ G ++F M
Sbjct: 219 SNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRV 278
Query: 322 DNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKF 381
+ D+ T+ LL SC+ LL G+ +HG AIR + L + AL+ Y K +K
Sbjct: 279 EGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKK 338
Query: 382 AEC-------------------------------VFGRINEKNMVSWNAIIAAYVQNGRN 410
E +F + EKN +++NA++A + +NG
Sbjct: 339 VESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHG 398
Query: 411 EEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAI 470
+AL+LF + + ++ ++ S + A ++ +QIH + K + N A+
Sbjct: 399 LKALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTAL 458
Query: 471 VYMYAKCGDLQTARRYFDSMSFKNLVS---WNTMIMAYAIHGFGTISIQLFSR-MKQNGI 526
+ M +C + A FD NL S ++I YA +G ++ LF R + + +
Sbjct: 459 LDMCTRCERMADAEEMFDQWP-SNLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKL 517
Query: 527 EPNESTFVSLLSSCSISGLVNEGWEL 552
+E + +L+ C G G+++
Sbjct: 518 FLDEVSLTLILAVCGTLGFREMGYQI 543
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/366 (20%), Positives = 173/366 (47%), Gaps = 44/366 (12%)
Query: 267 SLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLI- 325
+LI Y K G A VF ++ +V++ A+I G++ +E+ RM++ L+
Sbjct: 119 ALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQ 178
Query: 326 PDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECV 385
P+ T + +L +C + G IHG ++ FL + + +L+ +Y K + +
Sbjct: 179 PNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVL 238
Query: 386 --FGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCL-RNQTLKPDAVTIASILPAYAEL 442
F I ++++ SWN ++++ V+ G++ +A +LF+ + R + D+ T++++L + +
Sbjct: 239 KLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDS 298
Query: 443 ATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQ--------------------- 481
+ + +++H ++ L +NA++ Y+K D++
Sbjct: 299 SVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMI 358
Query: 482 ----------TARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNES 531
+A F +++ KN +++N ++ + +G G +++LF+ M Q G+E +
Sbjct: 359 TAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDF 418
Query: 532 TFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGC----MVDLLGRTGNLDAAKQ 587
+ S + +C GLV+E + + + I +G C ++D+ R + A++
Sbjct: 419 SLTSAVDAC---GLVSE--KKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEE 473
Query: 588 FIEEMP 593
++ P
Sbjct: 474 MFDQWP 479
>AT1G03540.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:883782-885611 FORWARD
Length = 609
Score = 325 bits (834), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 181/542 (33%), Positives = 298/542 (54%), Gaps = 7/542 (1%)
Query: 129 FPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFG-FVEVAEKVFEAM 187
+ +++ C ++ SFI G + H ++K GL+ D V NSL+ +YFK G + +VF+
Sbjct: 64 YASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDGR 123
Query: 188 PLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGK 247
++D +SW M++GY + +K+L F EM+ G + ++ S++ CS VR G+
Sbjct: 124 FVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGR 183
Query: 248 EIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAING 307
H VI +G E + + ++L +Y + A RVF+EM +++ W A++ ++ N
Sbjct: 184 CFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKND 243
Query: 308 HFLESFTCLKRMQE-DNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLE 366
+ E+ M L+PD T +L +C L +GK IHG I ++V+E
Sbjct: 244 LYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVE 303
Query: 367 TALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLK 426
++L+DMYGKCG ++ A VF +++KN VSW+A++ Y QNG +E+A+E+F + +
Sbjct: 304 SSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEEK--- 360
Query: 427 PDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRY 486
D ++L A A LA V K+IH + N +A++ +Y K G + +A R
Sbjct: 361 -DLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRV 419
Query: 487 FDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLV 546
+ MS +N+++WN M+ A A +G G ++ F+ M + GI+P+ +F+++L++C +G+V
Sbjct: 420 YSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMV 479
Query: 547 NEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLT 606
+EG F M Y I G EHY CM+DLLGR G + A+ +E A +WG LL
Sbjct: 480 DEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDASLWGVLLG 539
Query: 607 ASRNNNDIF-FAEFAAKHILSHDNDNTGCYVLLANMYAEAGRWEDVEQIKLVMKKKGLAK 665
N D AE AK ++ + YVLL+NMY GR D I+ +M ++G+AK
Sbjct: 540 PCAANADASRVAERIAKRMMELEPKYHMSYVLLSNMYKAIGRHGDALNIRKLMVRRGVAK 599
Query: 666 TV 667
TV
Sbjct: 600 TV 601
Score = 196 bits (499), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 127/469 (27%), Positives = 236/469 (50%), Gaps = 10/469 (2%)
Query: 75 AMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIK 134
M +F+ D W ++ G+ + ++ + M G+ + FT +K
Sbjct: 112 GMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVK 171
Query: 135 ACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVS 194
AC L G+ HG +I G + + ++ ++L +Y A +VF+ MP D++
Sbjct: 172 ACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVIC 231
Query: 195 WNCMVNGYRVIGDGLKSLMCFKEM-LGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQV 253
W +++ + ++L F M G G PD + + L C ++ GKEIH ++
Sbjct: 232 WTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKL 291
Query: 254 IRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESF 313
I NG+ +++V++SL+DMY KCG V A +VFN M+ KN V+W+A++GGY NG ++
Sbjct: 292 ITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAI 351
Query: 314 TCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMY 373
+ M+E +L +L +C+ + GK IHG +R+ ++++E+AL+D+Y
Sbjct: 352 EIFREMEEKDL----YCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLY 407
Query: 374 GKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIA 433
GK G + A V+ +++ +NM++WNA+++A QNGR EEA+ F+ + + +KPD ++
Sbjct: 408 GKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFI 467
Query: 434 SILPAYAELATVSECKQIHAYITK-LELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSF 492
+IL A V E + + K + T + ++ + + G + A +
Sbjct: 468 AILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAEC 527
Query: 493 KNLVS-WNTMIMAYAIHGFGT-ISIQLFSRMKQNGIEPNESTFVSLLSS 539
+N S W ++ A + + ++ ++ RM + +EP LLS+
Sbjct: 528 RNDASLWGVLLGPCAANADASRVAERIAKRMME--LEPKYHMSYVLLSN 574
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 94/206 (45%), Gaps = 3/206 (1%)
Query: 408 GRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTS 467
G+ EA+ + + + + AS+L ++ + Q HA++ K L ++
Sbjct: 40 GQLTEAIRILNSTHSSEIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVG 99
Query: 468 NAIVYMYAKCG-DLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGI 526
N+++ +Y K G ++ RR FD K+ +SW +M+ Y ++++F M G+
Sbjct: 100 NSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGL 159
Query: 527 EPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAK 586
+ NE T S + +CS G V G F+ + + + ++ + L G A+
Sbjct: 160 DANEFTLSSAVKACSELGEVRLG-RCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDAR 218
Query: 587 QFIEEMPLVPTARIWGSLLTASRNNN 612
+ +EMP P W ++L+A N+
Sbjct: 219 RVFDEMP-EPDVICWTAVLSAFSKND 243
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 62/131 (47%), Gaps = 6/131 (4%)
Query: 73 SGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFV 132
SG +D+A ++ KM+ + WN ++ + G +E + F++ M +GI D +F +
Sbjct: 410 SGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAI 469
Query: 133 IKACGRLLSFIEGKK---VHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPL 189
+ ACG EG+ + K I + Y C +ID+ + G E AE + E
Sbjct: 470 LTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSC--MIDLLGRAGLFEEAENLLERAEC 527
Query: 190 RDLVS-WNCMV 199
R+ S W ++
Sbjct: 528 RNDASLWGVLL 538
>AT3G05340.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:1524071-1526047 REVERSE
Length = 658
Score = 324 bits (831), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 192/598 (32%), Positives = 316/598 (52%), Gaps = 12/598 (2%)
Query: 124 IDNFTFPFVIKACGRLLSFIE-GKKVHGKLIK-----IGLDRDIY-----VCNSLIDMYF 172
+++ ++ CGR F G +H +IK +D DI+ V NSL+ +Y
Sbjct: 42 LNHVDMSLLLSICGREGWFPHLGPCLHASIIKNPEFFEPVDADIHRNALVVWNSLLSLYA 101
Query: 173 KFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMIS 232
K G + A K+F+ MP+RD++S N + G+ + + K MLG G D ++
Sbjct: 102 KCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGSG-GFDHATLTI 160
Query: 233 SLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKN 292
L C K IH I +G + +I V LI Y KCG VF+ M+ +N
Sbjct: 161 VLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRN 220
Query: 293 IVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHG 352
++ A+I G N + M+ + P+++T ++ L +CS ++EG+ IH
Sbjct: 221 VITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHA 280
Query: 353 YAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEE 412
+ L +E+AL+DMY KCG ++ A +F E + VS I+ QNG EE
Sbjct: 281 LLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEE 340
Query: 413 ALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVY 472
A++ F + ++ DA ++++L ++ KQ+H+ + K + S NTF +N ++
Sbjct: 341 AIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLIN 400
Query: 473 MYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNEST 532
MY+KCGDL ++ F M +N VSWN+MI A+A HG G +++L+ M ++P + T
Sbjct: 401 MYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVT 460
Query: 533 FVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEM 592
F+SLL +CS GL+++G EL N MK + I+ EHY C++D+LGR G L AK FI+ +
Sbjct: 461 FLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSL 520
Query: 593 PLVPTARIWGSLLTASRNNNDIFFAEFAAKHILSHDNDNTGCYVLLANMYAEAGRWEDVE 652
PL P +IW +LL A + D E+AA+ + D++ ++L+AN+Y+ G+W++
Sbjct: 521 PLKPDCKIWQALLGACSFHGDTEVGEYAAEQLFQTAPDSSSAHILIANIYSSRGKWKERA 580
Query: 653 QIKLVMKKKGLAKTVDCCTVESKGKSQKFINNNKSHQQAYMIYDVLDIILKKIGEDVY 710
+ MK G+ K ++E + K+ F+ +K H QA IYDVL + + ++ Y
Sbjct: 581 KTIKRMKAMGVTKETGISSIEIEHKTHSFVVEDKLHPQAEAIYDVLSGLFPVMVDEGY 638
Score = 179 bits (453), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 129/471 (27%), Positives = 230/471 (48%), Gaps = 22/471 (4%)
Query: 51 PKRGMIKPNSLSLTRSLCE-FVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQE 109
P I N+L + SL + G + +A+ LF++M D N++ GF +
Sbjct: 80 PVDADIHRNALVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETES 139
Query: 110 VIDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLID 169
RM G G D+ T V+ C + K +H I G D++I V N LI
Sbjct: 140 GFVLLKRMLGSG-GFDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLIT 198
Query: 170 MYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGY---RVIGDGLKSLMCFKEMLGLGEKPD 226
YFK G VF+ M R++++ +++G + DGL+ + L P+
Sbjct: 199 SYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGL---VHPN 255
Query: 227 RLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFN 286
++ +S+L CS + G++IH + + G+E ++ ++++L+DMY+KCG ++ A +F
Sbjct: 256 SVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFE 315
Query: 287 EMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLE 346
T + V+ ++ G A NG E+ RM + + DA + +L +L
Sbjct: 316 STTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGL 375
Query: 347 GKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQ 406
GK +H I++ F + + L++MY KCG L ++ VF R+ ++N VSWN++IAA+ +
Sbjct: 376 GKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFAR 435
Query: 407 NGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATV-------SECKQIHAYITKLE 459
+G AL+L+ + +KP VT S+L A + + + +E K++H +E
Sbjct: 436 HGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHG----IE 491
Query: 460 LSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFK-NLVSWNTMIMAYAIHG 509
+ +T I+ M + G L+ A+ + DS+ K + W ++ A + HG
Sbjct: 492 PRTEHYT--CIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALLGACSFHG 540
Score = 132 bits (333), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 162/338 (47%), Gaps = 14/338 (4%)
Query: 82 LFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLS 141
+F+ M+ + +I G L ++ + + M + ++ T+ + AC
Sbjct: 212 VFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQR 271
Query: 142 FIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNG 201
+EG+++H L K G++ ++ + ++L+DMY K G +E A +FE+ D VS ++ G
Sbjct: 272 IVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVG 331
Query: 202 YRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELD 261
G +++ F ML G + D + + LG I + GK++H VI+ +
Sbjct: 332 LAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGN 391
Query: 262 IMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQE 321
V LI+MY+KCG + ++ VF M +N V+WN+MI +A +GH L + + M
Sbjct: 392 TFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTT 451
Query: 322 DNLIPDAITMINLLPSCSKFGTLLEG-------KCIHGYAIRKMFLPHLVLETALVDMYG 374
+ P +T ++LL +CS G + +G K +HG P T ++DM G
Sbjct: 452 LEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIE------PRTEHYTCIIDMLG 505
Query: 375 KCGQLKFAECVFGRINEK-NMVSWNAIIAAYVQNGRNE 411
+ G LK A+ + K + W A++ A +G E
Sbjct: 506 RAGLLKEAKSFIDSLPLKPDCKIWQALLGACSFHGDTE 543
>AT3G62890.1 | Symbols: | binding | chr3:23246168-23247973 FORWARD
Length = 573
Score = 324 bits (831), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 191/522 (36%), Positives = 283/522 (54%), Gaps = 38/522 (7%)
Query: 318 RMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCG 377
RM+ + PD T LLPS L G+ H + + T+L++MY CG
Sbjct: 52 RMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCG 111
Query: 378 QLKFAECVF---------------------GRIN----------EKNMVSWNAIIAAYVQ 406
L+ A+ VF G I+ E+N++SW+ +I YV
Sbjct: 112 DLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVM 171
Query: 407 NGRNEEALELFHCLR-----NQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELS 461
G+ +EAL+LF ++ ++P+ T++++L A L + + K +HAYI K +
Sbjct: 172 CGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVE 231
Query: 462 SNTFTSNAIVYMYAKCGDLQTARRYFDSM-SFKNLVSWNTMIMAYAIHGFGTISIQLFSR 520
+ A++ MYAKCG L+ A+R F+++ S K++ +++ MI A++G QLFS
Sbjct: 232 IDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSE 291
Query: 521 MK-QNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRT 579
M + I PN TFV +L +C GL+NEG F M ++ I I+HYGCMVDL GR+
Sbjct: 292 MTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRS 351
Query: 580 GNLDAAKQFIEEMPLVPTARIWGSLLTASRNNNDIFFAEFAAKHILSHDNDNTGCYVLLA 639
G + A+ FI MP+ P IWGSLL+ SR DI E A K ++ D N+G YVLL+
Sbjct: 352 GLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLS 411
Query: 640 NMYAEAGRWEDVEQIKLVMKKKGLAKTVDCCTVESKGKSQKFINNNKSHQQAYMIYDVLD 699
N+YA+ GRW +V+ I+ M+ KG+ K C VE +G +F+ ++S Q++ IY +LD
Sbjct: 412 NVYAKTGRWMEVKCIRHEMEVKGINKVPGCSYVEVEGVVHEFVVGDESQQESERIYAMLD 471
Query: 700 IILKKIGEDVYIHSLSKFRPADVIKKKMKSPQNHSVKLAICFGLISTAIGKPIIIRKNTR 759
I++++ E Y+ + K K + HS KLAI F L+ T G P+ I KN R
Sbjct: 472 EIMQRLREAGYVTDTKEVLLDLNEKDKEIALSYHSEKLAIAFCLMKTRPGTPVRIIKNLR 531
Query: 760 ICKDCHIAAKKISRVTKREIIVGDSKIFHHFEDGRCSCGDYW 801
IC DCH+ K IS++ REI+V D FHHF DG CSC D+W
Sbjct: 532 ICGDCHLVMKMISKLFSREIVVRDCNRFHHFRDGSCSCRDFW 573
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 176/357 (49%), Gaps = 43/357 (12%)
Query: 90 DTYIWNVIIRGFSN---KGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGK 146
++++WN+IIR + I Y RM + D TFPF++ + L G+
Sbjct: 23 ESFLWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQ 82
Query: 147 KVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWN---------- 196
+ H +++ GLD+D +V SL++MY G + A++VF+ +DL +WN
Sbjct: 83 RTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAG 142
Query: 197 ---------------------CMVNGYRVIGDGLKSLMCFKEMLGLGE-----KPDRLSM 230
C++NGY + G ++L F+EM +P+ +M
Sbjct: 143 LIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTM 202
Query: 231 ISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEM-T 289
+ L C + GK +H + + +E+DI++ T+LIDMYAKCG ++ A+RVFN + +
Sbjct: 203 STVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGS 262
Query: 290 CKNIVAWNAMIGGYAINGHFLESFTCLKRM-QEDNLIPDAITMINLLPSCSKFGTLLEGK 348
K++ A++AMI A+ G E F M DN+ P+++T + +L +C G + EGK
Sbjct: 263 KKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGK 322
Query: 349 CIHGYAIRKM-FLPHLVLETALVDMYGKCGQLKFAECVFGRIN-EKNMVSWNAIIAA 403
I + P + +VD+YG+ G +K AE + E +++ W ++++
Sbjct: 323 SYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSG 379
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 142/291 (48%), Gaps = 12/291 (4%)
Query: 70 FVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEG-----IGI 124
+ +G +D+A LF++M + + W+ +I G+ G ++E +D + M+ +
Sbjct: 138 YAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRP 197
Query: 125 DNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVF 184
+ FT V+ ACGRL + +GK VH + K ++ DI + +LIDMY K G +E A++VF
Sbjct: 198 NEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVF 257
Query: 185 EAM-PLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGE-KPDRLSMISSLGGCSIGCC 242
A+ +D+ +++ M+ + G + F EM P+ ++ + LG C
Sbjct: 258 NALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGL 317
Query: 243 VRGGKEIHCQVIRN-GLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCK-NIVAWNAMI 300
+ GK +I G+ I ++D+Y + G + AE M + +++ W +++
Sbjct: 318 INEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLL 377
Query: 301 GGYAINGHFLESFTCLKRMQE-DNLIPDAITMINLLPSCSKFGTLLEGKCI 350
G + G LKR+ E D + A +++ + +K G +E KCI
Sbjct: 378 SGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNV--YAKTGRWMEVKCI 426
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 105/230 (45%), Gaps = 40/230 (17%)
Query: 397 WNAIIAAYVQN---GRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHA 453
WN II A V N + + ++ +RN + PD T +LP++ + ++ HA
Sbjct: 27 WNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHA 86
Query: 454 YITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTI 513
I L + F +++ MY+ CGDL++A+R FD K+L +WN+++ AYA G
Sbjct: 87 QILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDD 146
Query: 514 SIQLFSRMKQ----------NG--------------------------IEPNESTFVSLL 537
+ +LF M + NG + PNE T ++L
Sbjct: 147 ARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVL 206
Query: 538 SSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQ 587
S+C G + +G + ++ Y+++ I ++D+ + G+L+ AK+
Sbjct: 207 SACGRLGALEQG-KWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKR 255
>AT3G05240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:1493684-1495381 REVERSE
Length = 548
Score = 324 bits (830), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 180/542 (33%), Positives = 301/542 (55%), Gaps = 21/542 (3%)
Query: 141 SFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYF---KFGFVEVAEKVFEAMPLRDLVSWNC 197
S +E ++HG +IK + R++ + LID + + A VFE++ + WN
Sbjct: 18 SLVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESIDCPSVYIWNS 77
Query: 198 MVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNG 257
M+ GY + K+L+ ++EML G PD + L CS ++ G +H V++ G
Sbjct: 78 MIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGFVVKTG 137
Query: 258 LELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLK 317
E+++ V T L+ MY CG+V+Y RVF ++ N+VAW ++I G+ N F ++ +
Sbjct: 138 FEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFR 197
Query: 318 RMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCG 377
MQ + + + M++LL +C G+C Y K+ +++L T+L+DMY KCG
Sbjct: 198 EMQSNGVKANETIMVDLLVAC--------GRCFDPYFQSKVGF-NVILATSLIDMYAKCG 248
Query: 378 QLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILP 437
L+ A +F + E+ +VSWN+II Y QNG EEAL +F + + + PD VT S++
Sbjct: 249 DLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIR 308
Query: 438 AYAELATVSECKQ----IHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFK 493
A + + C Q IHAY++K + A+V MYAK GD ++A++ F+ + K
Sbjct: 309 A----SMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKK 364
Query: 494 NLVSWNTMIMAYAIHGFGTISIQLFSRMKQNG-IEPNESTFVSLLSSCSISGLVNEGWEL 552
+ ++W +I+ A HG G ++ +F RM++ G P+ T++ +L +CS GLV EG
Sbjct: 365 DTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRY 424
Query: 553 FNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTASRNNN 612
F M+ + ++ +EHYGCMVD+L R G + A++ ++ MP+ P IWG+LL +
Sbjct: 425 FAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNGCDIHE 484
Query: 613 DIFFAEFAAKHILSHDNDNTGCYVLLANMYAEAGRWEDVEQIKLVMKKKGLAKTVDCCTV 672
++ + + + +G YVLL+N+YA+AGRW DV+ I+ MK K + K + +V
Sbjct: 485 NLELTDRIRSMVAEPEELGSGIYVLLSNIYAKAGRWADVKLIRESMKSKRVDKVLGHSSV 544
Query: 673 ES 674
E+
Sbjct: 545 ET 546
Score = 211 bits (537), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 132/455 (29%), Positives = 226/455 (49%), Gaps = 16/455 (3%)
Query: 79 ALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGR 138
A +FE ++ P YIWN +IRG+SN + + FY M +G D FTFP+V+KAC
Sbjct: 60 ARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSG 119
Query: 139 LLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCM 198
L G VHG ++K G + ++YV L+ MY G V +VFE +P ++V+W +
Sbjct: 120 LRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSL 179
Query: 199 VNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGL 258
++G+ ++ F+EM G K + M+ L C G C ++ +
Sbjct: 180 ISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVAC--GRCFD-------PYFQSKV 230
Query: 259 ELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKR 318
++++ TSLIDMYAKCG + A +F+ M + +V+WN++I GY+ NG E+
Sbjct: 231 GFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLD 290
Query: 319 MQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQ 378
M + + PD +T ++++ + G G+ IH Y + F+ + ALV+MY K G
Sbjct: 291 MLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGD 350
Query: 379 LKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQ-TLKPDAVTIASILP 437
+ A+ F + +K+ ++W +I +G EAL +F ++ + PD +T +L
Sbjct: 351 AESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLY 410
Query: 438 AYAELATVSECKQIHAYITKLE-LSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFK-NL 495
A + + V E ++ A + L L +V + ++ G + A R +M K N+
Sbjct: 411 ACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNV 470
Query: 496 VSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNE 530
W ++ IH +++L R++ EP E
Sbjct: 471 NIWGALLNGCDIHE----NLELTDRIRSMVAEPEE 501
Score = 169 bits (427), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 112/365 (30%), Positives = 182/365 (49%), Gaps = 30/365 (8%)
Query: 74 GAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVI 133
G ++ L +FE + Q + W +I GF N F + I+ + M+ G+ + ++
Sbjct: 156 GEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLL 215
Query: 134 KACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLV 193
ACGR KV +I + SLIDMY K G + A +F+ MP R LV
Sbjct: 216 VACGRCFDPYFQSKVGFNVI---------LATSLIDMYAKCGDLRTARYLFDGMPERTLV 266
Query: 194 SWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQV 253
SWN ++ GY GD ++L F +ML LG PD+++ +S + I C + G+ IH V
Sbjct: 267 SWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYV 326
Query: 254 IRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESF 313
+ G D + +L++MYAK G + A++ F ++ K+ +AW +I G A +GH E+
Sbjct: 327 SKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEAL 386
Query: 314 TCLKRMQED-NLIPDAITMINLLPSCSKFGTLLEG-------KCIHGYAIRKMFLPHLVL 365
+ +RMQE N PD IT + +L +CS G + EG + +HG P +
Sbjct: 387 SIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLE------PTVEH 440
Query: 366 ETALVDMYGKCGQLKFAECVFGRINEK-NMVSWNAIIAAYVQNGRN-EEALELFHCLRNQ 423
+VD+ + G+ + AE + + K N+ W A++ NG + E LEL +R+
Sbjct: 441 YGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALL-----NGCDIHENLELTDRIRSM 495
Query: 424 TLKPD 428
+P+
Sbjct: 496 VAEPE 500
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 118/245 (48%), Gaps = 13/245 (5%)
Query: 70 FVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTF 129
+ G + A YLF+ M + WN II G+S G +E + + M GI D TF
Sbjct: 244 YAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTF 303
Query: 130 PFVIKA-----CGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVF 184
VI+A C +L G+ +H + K G +D + +L++MY K G E A+K F
Sbjct: 304 LSVIRASMIQGCSQL-----GQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAF 358
Query: 185 EAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGE-KPDRLSMISSLGGCS-IGCC 242
E + +D ++W ++ G G G ++L F+ M G PD ++ + L CS IG
Sbjct: 359 EDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLV 418
Query: 243 VRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCK-NIVAWNAMIG 301
G + +GLE + ++D+ ++ G+ + AER+ M K N+ W A++
Sbjct: 419 EEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLN 478
Query: 302 GYAIN 306
G I+
Sbjct: 479 GCDIH 483
>AT5G52630.1 | Symbols: MEF1 | MEF1 (MITOCHONDRIAL RNA EDITING
FACTOR 1) | chr5:21350375-21352141 FORWARD
Length = 588
Score = 323 bits (827), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 190/557 (34%), Positives = 313/557 (56%), Gaps = 3/557 (0%)
Query: 246 GKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAI 305
G ++H V+++GL L +V +LI+ Y+K + R F + K+ W+++I +A
Sbjct: 34 GLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSSTTWSSIISCFAQ 93
Query: 306 NGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVL 365
N S LK+M NL PD + + SC+ G+ +H +++ + + +
Sbjct: 94 NELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFV 153
Query: 366 ETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTL 425
++LVDMY KCG++ +A +F + ++N+V+W+ ++ Y Q G NEEAL LF + L
Sbjct: 154 GSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENL 213
Query: 426 KPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARR 485
+ + +S++ A + +QIH K S++F +++V +Y+KCG + A +
Sbjct: 214 AVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQ 273
Query: 486 YFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGL 545
F+ + KNL WN M+ AYA H I+LF RMK +G++PN TF+++L++CS +GL
Sbjct: 274 VFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGL 333
Query: 546 VNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLL 605
V+EG F+ MK + I+ +HY +VD+LGR G L A + I MP+ PT +WG+LL
Sbjct: 334 VDEGRYYFDQMK-ESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALL 392
Query: 606 TASRNNNDIFFAEFAAKHILSHDNDNTGCYVLLANMYAEAGRWEDVEQIKLVMKKKGLAK 665
T+ + + A FAA + ++G ++ L+N YA GR+ED + + +++ +G K
Sbjct: 393 TSCTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRDRGEKK 452
Query: 666 TVDCCTVESKGKSQKFINNNKSHQQAYMIYDVLDIILKKIGEDVYIHSLSK-FRPADVIK 724
VE + K F + H+++ IY+ L + +++ + YI S R D
Sbjct: 453 ETGLSWVEERNKVHTFAAGERRHEKSKEIYEKLAELGEEMEKAGYIADTSYVLREVDG-D 511
Query: 725 KKMKSPQNHSVKLAICFGLISTAIGKPIIIRKNTRICKDCHIAAKKISRVTKREIIVGDS 784
+K ++ + HS +LAI FGLI+ +PI + KN R+C DCH A K +S T+R IIV D+
Sbjct: 512 EKNQTIRYHSERLAIAFGLITFPADRPIRVMKNLRVCGDCHNAIKFMSVCTRRVIIVRDN 571
Query: 785 KIFHHFEDGRCSCGDYW 801
FH FEDG+CSC DYW
Sbjct: 572 NRFHRFEDGKCSCNDYW 588
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 108/379 (28%), Positives = 194/379 (51%), Gaps = 3/379 (0%)
Query: 132 VIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRD 191
++ + R S I+G ++HG ++K GL V N+LI+ Y K + + FE P +
Sbjct: 21 LLLSSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKS 80
Query: 192 LVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHC 251
+W+ +++ + SL K+M+ +PD + S+ C+I G+ +HC
Sbjct: 81 STTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHC 140
Query: 252 QVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLE 311
++ G + D+ V +SL+DMYAKCG++ YA ++F+EM +N+V W+ M+ GYA G E
Sbjct: 141 LSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEE 200
Query: 312 SFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLE-GKCIHGYAIRKMFLPHLVLETALV 370
+ K +NL + + +++ C+ TLLE G+ IHG +I+ F + ++LV
Sbjct: 201 ALWLFKEALFENLAVNDYSFSSVISVCAN-STLLELGRQIHGLSIKSSFDSSSFVGSSLV 259
Query: 371 DMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAV 430
+Y KCG + A VF + KN+ WNA++ AY Q+ ++ +ELF ++ +KP+ +
Sbjct: 260 SLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFI 319
Query: 431 TIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSM 490
T ++L A + V E + + + + ++V M + G LQ A +M
Sbjct: 320 TFLNVLNACSHAGLVDEGRYYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALEVITNM 379
Query: 491 SFKNLVS-WNTMIMAYAIH 508
S W ++ + +H
Sbjct: 380 PIDPTESVWGALLTSCTVH 398
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 98/319 (30%), Positives = 160/319 (50%), Gaps = 12/319 (3%)
Query: 101 FSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRD 160
F+ L ++F +M + D+ P K+C L G+ VH +K G D D
Sbjct: 91 FAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDAD 150
Query: 161 IYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLG 220
++V +SL+DMY K G + A K+F+ MP R++V+W+ M+ GY +G+ ++L FKE L
Sbjct: 151 VFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALF 210
Query: 221 LGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDY 280
+ S S + C+ + G++IH I++ + V +SL+ +Y+KCG +
Sbjct: 211 ENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEG 270
Query: 281 AERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSK 340
A +VFNE+ KN+ WNAM+ YA + H + KRM+ + P+ IT +N+L +CS
Sbjct: 271 AYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSH 330
Query: 341 FGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFA------------ECVFGR 388
G + EG+ P +LVDM G+ G+L+ A E V+G
Sbjct: 331 AGLVDEGRYYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGA 390
Query: 389 INEKNMVSWNAIIAAYVQN 407
+ V N +AA+ +
Sbjct: 391 LLTSCTVHKNTELAAFAAD 409
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 111/232 (47%), Gaps = 1/232 (0%)
Query: 70 FVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTF 129
+ G + A +F++M Q + W+ ++ G++ G +E + + +E + +++++F
Sbjct: 161 YAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSF 220
Query: 130 PFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPL 189
VI C G+++HG IK D +V +SL+ +Y K G E A +VF +P+
Sbjct: 221 SSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPV 280
Query: 190 RDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEI 249
++L WN M+ Y K + FK M G KP+ ++ ++ L CS V G+
Sbjct: 281 KNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYY 340
Query: 250 HCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVA-WNAMI 300
Q+ + +E SL+DM + G++ A V M + W A++
Sbjct: 341 FDQMKESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALL 392
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 77/163 (47%), Gaps = 3/163 (1%)
Query: 432 IASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMS 491
I +L + A + + Q+H Y+ K LS +N ++ Y+K +RR F+
Sbjct: 18 ICDLLLSSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSP 77
Query: 492 FKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWE 551
K+ +W+++I +A + +S++ +M + P++ S SC+I + G
Sbjct: 78 QKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRS 137
Query: 552 LFN-SMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMP 593
+ SMK Y+ D + +VD+ + G + A++ +EMP
Sbjct: 138 VHCLSMKTGYDADVFVG--SSLVDMYAKCGEIVYARKMFDEMP 178
>AT1G04840.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:1362867-1364962 REVERSE
Length = 665
Score = 322 bits (826), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 211/693 (30%), Positives = 343/693 (49%), Gaps = 71/693 (10%)
Query: 125 DNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGL-----DRDIYVCNSLIDMYFKFGFVEV 179
D F +I AC S + VH ++++ G+ + C+SL+ +
Sbjct: 28 DESHFISLIHACKDTASL---RHVHAQILRRGVLSSRVAAQLVSCSSLLKS------PDY 78
Query: 180 AEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSI 239
+ +F R+ N ++ G S+ F ML LG KPDRL+ L S
Sbjct: 79 SLSIFRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSK 138
Query: 240 GCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNE----MTCKNIVA 295
G+ +H ++N ++ D V+ SL+DMYAK G++ +A +VF E + ++I+
Sbjct: 139 LGFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILI 198
Query: 296 WNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAI 355
WN +I GY + T + M E N + TL++G
Sbjct: 199 WNVLINGYCRAKDMHMATTLFRSMPERN--------------SGSWSTLIKG-------- 236
Query: 356 RKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALE 415
Y G+L A+ +F + EKN+VSW +I + Q G E A+
Sbjct: 237 -----------------YVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAIS 279
Query: 416 LFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYA 475
+ + + LKP+ TIA++L A ++ + +IH YI + + A+V MYA
Sbjct: 280 TYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYA 339
Query: 476 KCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVS 535
KCG+L A F +M+ K+++SW MI +A+HG +IQ F +M +G +P+E F++
Sbjct: 340 KCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLA 399
Query: 536 LLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLV 595
+L++C S V+ G F+SM++DY I+ ++HY +VDLLGR G L+ A + +E MP+
Sbjct: 400 VLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPIN 459
Query: 596 PTARIWGSLLTASRNNNDIFFAEFAAKHILSHDNDNTGCYVLLANMYAEAGRWEDVEQIK 655
P W +L A + + AE ++++L D + G Y+ L +A G +DVE+ +
Sbjct: 460 PDLTTWAALYRACKAHKGYRRAESVSQNLLELDPELCGSYIFLDKTHASKGNIQDVEKRR 519
Query: 656 LVMKKKGLAKTVDCCTVESKGKSQKFINNNKSHQQAYMIYDVLDIILK-------KIGED 708
L ++K+ +++ +E G+ KF + SH+ I LD I+ G D
Sbjct: 520 LSLQKRIKERSLGWSYIELDGQLNKFSAGDYSHKLTQEIGLKLDEIISLAIQKGYNPGAD 579
Query: 709 VYIHSLSKFRPADVIKKKMKSPQNHSVKLAICFGLISTAIGKPIIIRKNTRICKDCHIAA 768
IH + + ++K HS KLA+ G + TA G I I KN RIC DCH
Sbjct: 580 WSIHDIEE-------EEKENVTGIHSEKLALTLGFLRTAPGTTIRIIKNLRICGDCHSLM 632
Query: 769 KKISRVTKREIIVGDSKIFHHFEDGRCSCGDYW 801
K +S++++R+I++ D++ FHHF+DGRCSCGDYW
Sbjct: 633 KYVSKISQRDILLRDARQFHHFKDGRCSCGDYW 665
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 110/366 (30%), Positives = 176/366 (48%), Gaps = 43/366 (11%)
Query: 77 DNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKAC 136
D +L +F + + ++ N +IRG + F+ + + M G+ D TFPFV+K+
Sbjct: 77 DYSLSIFRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSN 136
Query: 137 GRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLR----DL 192
+L G+ +H +K +D D +V SL+DMY K G ++ A +VFE P R +
Sbjct: 137 SKLGFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESI 196
Query: 193 VSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQ 252
+ WN ++NGY D + F+ M P+R S G S
Sbjct: 197 LIWNVLINGYCRAKDMHMATTLFRSM------PERNS-----GSWS-------------- 231
Query: 253 VIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLES 312
+LI Y G+++ A+++F M KN+V+W +I G++ G + +
Sbjct: 232 --------------TLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETA 277
Query: 313 FTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDM 372
+ M E L P+ T+ +L +CSK G L G IHGY + + TALVDM
Sbjct: 278 ISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDM 337
Query: 373 YGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTI 432
Y KCG+L A VF +N K+++SW A+I + +GR +A++ F + KPD V
Sbjct: 338 YAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVF 397
Query: 433 ASILPA 438
++L A
Sbjct: 398 LAVLTA 403
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 131/261 (50%), Gaps = 12/261 (4%)
Query: 46 QMSETPKRGMIKPNSLSLTRSLCEFVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKG 105
M+ T R M + NS S + + +VDSG ++ A LFE M + + W +I GFS G
Sbjct: 213 HMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTG 272
Query: 106 LFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCN 165
++ I Y M +G+ + +T V+ AC + + G ++HG ++ G+ D +
Sbjct: 273 DYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGT 332
Query: 166 SLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKP 225
+L+DMY K G ++ A VF M +D++SW M+ G+ V G +++ CF++M+ GEKP
Sbjct: 333 ALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKP 392
Query: 226 DRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSL------IDMYAKCGKVD 279
D + ++ L C V G + + LD ++ +L +D+ + GK++
Sbjct: 393 DEVVFLAVLTACLNSSEVDLGLNFF-----DSMRLDYAIEPTLKHYVLVVDLLGRAGKLN 447
Query: 280 YAERVFNEMTCK-NIVAWNAM 299
A + M ++ W A+
Sbjct: 448 EAHELVENMPINPDLTTWAAL 468
>AT3G13880.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4572180-4574426 FORWARD
Length = 748
Score = 322 bits (826), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 186/636 (29%), Positives = 331/636 (52%), Gaps = 18/636 (2%)
Query: 79 ALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGR 138
A LF++M + + +N +I G++ G +++ ++ + + +D FT+ + CG
Sbjct: 101 ARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGE 160
Query: 139 LLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCM 198
G+ +HG ++ GL + +++ N LIDMY K G ++ A +F+ RD VSWN +
Sbjct: 161 RCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSL 220
Query: 199 VNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMIS-SLGGCSIGCCV-------RGGKEIH 250
++GY +G + L +M D L++ + +LG CC+ G IH
Sbjct: 221 ISGYVRVGAAEEPLNLLAKM-----HRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIH 275
Query: 251 CQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYA-----I 305
C + G+E DI+V+T+L+DMYAK G + A ++F+ M KN+V +NAMI G+
Sbjct: 276 CYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEIT 335
Query: 306 NGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVL 365
+ E+F MQ L P T +L +CS TL G+ IH + F +
Sbjct: 336 DEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFI 395
Query: 366 ETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTL 425
+AL+++Y G + F +++++ SW ++I +VQN + E A +LF L + +
Sbjct: 396 GSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHI 455
Query: 426 KPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARR 485
+P+ T++ ++ A A+ A +S +QI Y K + + T + + MYAK G++ A +
Sbjct: 456 RPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQ 515
Query: 486 YFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGL 545
F + ++ +++ MI + A HG ++ +F MK +GI+PN+ F+ +L +C GL
Sbjct: 516 VFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGL 575
Query: 546 VNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLL 605
V +G + F MK DY I+ +H+ C+VDLLGRTG L A+ I W +LL
Sbjct: 576 VTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRALL 635
Query: 606 TASRNNNDIFFAEFAAKHILSHDNDNTGCYVLLANMYAEAGRWEDVEQIKLVMKKKGLAK 665
++ R D + A+ ++ + + +G YVLL N+Y ++G E+++ +M+ +G+ K
Sbjct: 636 SSCRVYKDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMRDRGVKK 695
Query: 666 TVDCCTVESKGKSQKFINNNKSHQQAYMIYDVLDII 701
+ ++ F + SH + MIY +L+ +
Sbjct: 696 EPALSWIVIGNQTHSFAVADLSHPSSQMIYTMLETM 731
Score = 201 bits (512), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 142/489 (29%), Positives = 255/489 (52%), Gaps = 19/489 (3%)
Query: 123 GIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEK 182
+D+ + + + + S + GK HG +IK L+ +Y+ N+L++MY K + A +
Sbjct: 44 ALDSEGYKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQ 103
Query: 183 VFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCC 242
+F+ MP R+++S+N +++GY +G +++ F E K D+ + +LG C C
Sbjct: 104 LFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCD 163
Query: 243 VRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGG 302
+ G+ +H V+ NGL + + LIDMY+KCGK+D A +F+ ++ V+WN++I G
Sbjct: 164 LDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISG 223
Query: 303 YAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCS---KFGTLLEGKCIHGYAIRKMF 359
Y G E L +M D L + ++L +C G + +G IH Y +
Sbjct: 224 YVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGM 283
Query: 360 LPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQ-----NGRNEEAL 414
+V+ TAL+DMY K G LK A +F + KN+V++NA+I+ ++Q + + EA
Sbjct: 284 EFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAF 343
Query: 415 ELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMY 474
+LF ++ + L+P T + +L A + T+ +QIHA I K S+ F +A++ +Y
Sbjct: 344 KLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELY 403
Query: 475 AKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFV 534
A G + + F S S +++ SW +MI + + + LF ++ + I P E T
Sbjct: 404 ALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVS 463
Query: 535 SLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCM----VDLLGRTGNLDAAKQ-FI 589
++S+C+ ++ G ++ Y I GI+ + + + + ++GN+ A Q FI
Sbjct: 464 LMMSACADFAALSSGEQI-----QGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFI 518
Query: 590 E-EMPLVPT 597
E + P V T
Sbjct: 519 EVQNPDVAT 527
Score = 186 bits (472), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 121/499 (24%), Positives = 240/499 (48%), Gaps = 12/499 (2%)
Query: 74 GAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVI 133
G +D A+ LF++ ++ D WN +I G+ G +E ++ +M +G+ + + V+
Sbjct: 197 GKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVL 256
Query: 134 KACGRLLS--FIE-GKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLR 190
KAC L+ FIE G +H K+G++ DI V +L+DMY K G ++ A K+F MP +
Sbjct: 257 KACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSK 316
Query: 191 DLVSWNCMVNGYRVIGD-----GLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRG 245
++V++N M++G+ + + ++ F +M G +P + L CS +
Sbjct: 317 NVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEY 376
Query: 246 GKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAI 305
G++IH + +N + D + ++LI++YA G + + F + ++I +W +MI +
Sbjct: 377 GRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQ 436
Query: 306 NGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVL 365
N +F +++ ++ P+ T+ ++ +C+ F L G+ I GYAI+ +
Sbjct: 437 NEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSV 496
Query: 366 ETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTL 425
+T+ + MY K G + A VF + ++ +++A+I++ Q+G EAL +F ++ +
Sbjct: 497 KTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGI 556
Query: 426 KPDAVTIASILPAYAELATVSE-CKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTAR 484
KP+ +L A V++ K ++ N +V + + G L A
Sbjct: 557 KPNQQAFLGVLIACCHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAE 616
Query: 485 RYFDSMSFKN-LVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSIS 543
S F++ V+W ++ + ++ I ++ R+ + +EP S LL +
Sbjct: 617 NLILSSGFQDHPVTWRALLSSCRVYKDSVIGKRVAERLME--LEPEASGSYVLLHNIYND 674
Query: 544 GLVNEGWELFNSMKMDYNI 562
VN E + D +
Sbjct: 675 SGVNSSAEEVRELMRDRGV 693
>AT3G49740.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:18447788-18450001 FORWARD
Length = 737
Score = 322 bits (824), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 199/625 (31%), Positives = 322/625 (51%), Gaps = 24/625 (3%)
Query: 57 KPNSLSLTRSLCEFVDSGAMDNALYLFEKM-NQPDTYIWNVIIRGFSNKGLFQEVIDFYH 115
+P+ S T L G ++ A +F+KM + D IWN +I G G + ++ +
Sbjct: 120 EPDVYSWTTLLSASFKLGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFR 179
Query: 116 RMEYEGIGIDNFTFPFVIKACGR-LLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKF 174
M G+ D F F ++ C L F GK+VH +IK G V N+LI MYF
Sbjct: 180 EMHKLGVRHDKFGFATILSMCDYGSLDF--GKQVHSLVIKAGFFIASSVVNALITMYFNC 237
Query: 175 GFVEVAEKVFEA--MPLRDLVSWNCMVNGYRVIGDGLK---SLMCFKEMLGLGEKPDRLS 229
V A VFE + +RD V++N +++G G K SL+ F++ML +P L+
Sbjct: 238 QVVVDACLVFEETDVAVRDQVTFNVVIDGLA----GFKRDESLLVFRKMLEASLRPTDLT 293
Query: 230 MISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMT 289
+S +G CS C G ++H I+ G E +V + + MY+ A +VF +
Sbjct: 294 FVSVMGSCS---CAAMGHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLE 350
Query: 290 CKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKC 349
K++V WN MI Y + + KRM + PD T +LL + L +
Sbjct: 351 EKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDLDVL---EM 407
Query: 350 IHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGR 409
+ I+ + + AL+ Y K GQ++ A+ +F R KN++SWNAII+ + NG
Sbjct: 408 VQACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGF 467
Query: 410 NEEALELFHCLRNQTLK--PDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTS 467
E LE F CL ++ PDA T++++L +++ Q HAY+ + T
Sbjct: 468 PFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIG 527
Query: 468 NAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNG-I 526
NA++ MY++CG +Q + F+ MS K++VSWN++I AY+ HG G ++ + M+ G +
Sbjct: 528 NALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKV 587
Query: 527 EPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAK 586
P+ +TF ++LS+CS +GLV EG E+FNSM + + ++H+ C+VDLLGR G+LD A+
Sbjct: 588 IPDAATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAE 647
Query: 587 QF--IEEMPLVPTARIWGSLLTASRNNNDIFFAEFAAKHILSHDNDNTGCYVLLANMYAE 644
I E + +W +L +A + D+ + AK ++ + D+ YV L+N+YA
Sbjct: 648 SLVKISEKTIGSRVDVWWALFSACAAHGDLKLGKMVAKLLMEKEKDDPSVYVQLSNIYAG 707
Query: 645 AGRWEDVEQIKLVMKKKGLAKTVDC 669
AG W++ E+ + + G K C
Sbjct: 708 AGMWKEAEETRRAINMIGAMKQRGC 732
Score = 171 bits (434), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 148/536 (27%), Positives = 236/536 (44%), Gaps = 77/536 (14%)
Query: 44 KKQMSETPKRGMIKPNS---LSLTRSLCEFVDSGAMDNALYLFEKMNQPDTYIWNVIIRG 100
+K + T I NS L+L R L SG NAL LF +++ T
Sbjct: 2 RKALCLTESLSAIAENSTTLLNLNRRLTGLTRSGENRNALKLFADVHRCTT--------- 52
Query: 101 FSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRD 160
+ D ++ I L I G +VH I+ GL
Sbjct: 53 ---------------------LRPDQYSVSLAITTARHLRDTIFGGQVHCYAIRSGLLCH 91
Query: 161 IYVCNSLIDMY-------------------------------FKFGFVEVAEKVFEAMPL 189
+V N+L+ +Y FK G +E A +VF+ MP
Sbjct: 92 SHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFDKMPE 151
Query: 190 RDLVS-WNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKE 248
RD V+ WN M+ G + G S+ F+EM LG + D+ + L C G + GK+
Sbjct: 152 RDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILSMCDYG-SLDFGKQ 210
Query: 249 IHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNE--MTCKNIVAWNAMIGGYAIN 306
+H VI+ G + V +LI MY C V A VF E + ++ V +N +I G A
Sbjct: 211 VHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDGLA-G 269
Query: 307 GHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLE 366
ES ++M E +L P +T ++++ SCS G +HG AI+ + + ++
Sbjct: 270 FKRDESLLVFRKMLEASLRPTDLTFVSVMGSCSCAAM---GHQVHGLAIKTGYEKYTLVS 326
Query: 367 TALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLK 426
A + MY A VF + EK++V+WN +I++Y Q + A+ ++ + +K
Sbjct: 327 NATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVK 386
Query: 427 PDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRY 486
PD T S+L +L + + + A I K LSS SNA++ Y+K G ++ A
Sbjct: 387 PDEFTFGSLLATSLDLDVL---EMVQACIIKFGLSSKIEISNALISAYSKNGQIEKADLL 443
Query: 487 FDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIE--PNESTFVSLLSSC 540
F+ KNL+SWN +I + +GF ++ FS + ++ + P+ T +LLS C
Sbjct: 444 FERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSIC 499
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 117/516 (22%), Positives = 215/516 (41%), Gaps = 81/516 (15%)
Query: 246 GKEIHCQVIRNGL-------------------------------ELDIMVQTSLIDMYAK 274
G ++HC IR+GL E D+ T+L+ K
Sbjct: 76 GGQVHCYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFK 135
Query: 275 CGKVDYAERVFNEMTCKNIVA-WNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMIN 333
G ++YA VF++M ++ VA WNAMI G +G+ S + M + + D
Sbjct: 136 LGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFAT 195
Query: 334 LLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGR--INE 391
+L C +G+L GK +H I+ F + AL+ MY C + A VF +
Sbjct: 196 ILSMC-DYGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAV 254
Query: 392 KNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQI 451
++ V++N +I + + +E+L +F + +L+P +T S++ + + + Q+
Sbjct: 255 RDQVTFNVVIDG-LAGFKRDESLLVFRKMLEASLRPTDLTFVSVMGS---CSCAAMGHQV 310
Query: 452 HAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFG 511
H K T SNA + MY+ D A + F+S+ K+LV+WNTMI +Y G
Sbjct: 311 HGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLG 370
Query: 512 TISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGC 571
++ ++ RM G++P+E TF SLL+ + L + E+ + + + + IE
Sbjct: 371 KSAMSVYKRMHIIGVKPDEFTFGSLLA----TSLDLDVLEMVQACIIKFGLSSKIEISNA 426
Query: 572 MVDLLGRTGNLDAAKQFIE------------------------------------EMPLV 595
++ + G ++ A E E+ ++
Sbjct: 427 LISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRIL 486
Query: 596 PTARIWGSLLTASRNNNDIFFAEFAAKHILSHDN-DNTGCYVLLANMYAEAGRWEDVEQI 654
P A +LL+ + + + ++L H T L NMY++ G ++ ++
Sbjct: 487 PDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEV 546
Query: 655 KLVMKKKGLAKTVDCCTVESK-GKSQKFINNNKSHQ 689
M +K + + S+ G+ + +N K+ Q
Sbjct: 547 FNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQ 582
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 94/201 (46%), Gaps = 10/201 (4%)
Query: 390 NEKNMVSWNAIIAAYVQNGRNEEALELFHCL-RNQTLKPDAVTIASILPAYAELATVSEC 448
N +++ N + ++G N AL+LF + R TL+PD +++ + L
Sbjct: 17 NSTTLLNLNRRLTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFG 76
Query: 449 KQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIH 508
Q+H Y + L ++ SN ++ +Y + G+L + ++ FD + ++ SW T++ A
Sbjct: 77 GQVHCYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKL 136
Query: 509 GFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSM-KMDYNID-YGI 566
G + ++F +M + + + + ++++ C SG ELF M K+ D +G
Sbjct: 137 GDIEYAFEVFDKMPE---RDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGF 193
Query: 567 EHYGCMVDLLGRTGNLDAAKQ 587
M D G+LD KQ
Sbjct: 194 ATILSMCDY----GSLDFGKQ 210
>AT3G25060.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:9128516-9130321 FORWARD
Length = 601
Score = 320 bits (820), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 173/553 (31%), Positives = 300/553 (54%), Gaps = 2/553 (0%)
Query: 147 KVHGKLIKIG-LDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVI 205
++H +I G L + LI + G + A KVF+ +P R + +N M+ Y
Sbjct: 35 QIHAFVISTGNLLNGSSISRDLIASCGRIGEISYARKVFDELPQRGVSVYNSMIVVYSRG 94
Query: 206 GDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQ 265
+ + L + +M+ +PD + ++ C G + G+ + C+ + G + D+ V
Sbjct: 95 KNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVFVC 154
Query: 266 TSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLI 325
+S++++Y KCGK+D AE +F +M ++++ W M+ G+A G L++ + MQ +
Sbjct: 155 SSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFG 214
Query: 326 PDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECV 385
D + M+ LL + G G+ +HGY R ++V+ET+LVDMY K G ++ A V
Sbjct: 215 RDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRV 274
Query: 386 FGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATV 445
F R+ K VSW ++I+ + QNG +A E +++ +PD VT+ +L A +++ ++
Sbjct: 275 FSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSL 334
Query: 446 SECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAY 505
+ +H YI K + + T+ A++ MY+KCG L ++R F+ + K+LV WNTMI Y
Sbjct: 335 KTGRLVHCYILKRHVL-DRVTATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCY 393
Query: 506 AIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYG 565
IHG G + LF +M ++ IEP+ +TF SLLS+ S SGLV +G F+ M Y I
Sbjct: 394 GIHGNGQEVVSLFLKMTESNIEPDHATFASLLSALSHSGLVEQGQHWFSVMINKYKIQPS 453
Query: 566 IEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTASRNNNDIFFAEFAAKHIL 625
+HY C++DLL R G ++ A I L IW +LL+ N+ ++ + AA IL
Sbjct: 454 EKHYVCLIDLLARAGRVEEALDMINSEKLDNALPIWVALLSGCINHRNLSVGDIAANKIL 513
Query: 626 SHDNDNTGCYVLLANMYAEAGRWEDVEQIKLVMKKKGLAKTVDCCTVESKGKSQKFINNN 685
+ D+ G L++N +A A +W++V +++ +M+ + K +E G+ + F+ +
Sbjct: 514 QLNPDSIGIQTLVSNFFATANKWKEVAKVRKLMRNGAMEKVPGYSAIEVNGELRTFLMED 573
Query: 686 KSHQQAYMIYDVL 698
SH + Y + VL
Sbjct: 574 LSHHEHYHMLQVL 586
Score = 234 bits (598), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 132/422 (31%), Positives = 226/422 (53%), Gaps = 2/422 (0%)
Query: 74 GAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVI 133
G + A +F+++ Q ++N +I +S EV+ Y +M E I D+ TF I
Sbjct: 64 GEISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTI 123
Query: 134 KACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLV 193
KAC L +G+ V K + G D++VC+S++++Y K G ++ AE +F M RD++
Sbjct: 124 KACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVI 183
Query: 194 SWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQV 253
W MV G+ G LK++ ++EM G DR+ M+ L + G+ +H +
Sbjct: 184 CWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYL 243
Query: 254 IRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESF 313
R GL ++++V+TSL+DMYAK G ++ A RVF+ M K V+W ++I G+A NG ++F
Sbjct: 244 YRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAF 303
Query: 314 TCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMY 373
+ MQ PD +T++ +L +CS+ G+L G+ +H Y +++ L V TAL+DMY
Sbjct: 304 EAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHVLDR-VTATALMDMY 362
Query: 374 GKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIA 433
KCG L + +F + K++V WN +I+ Y +G +E + LF + ++PD T A
Sbjct: 363 SKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATFA 422
Query: 434 SILPAYAELATVSECKQ-IHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSF 492
S+L A + V + + I K ++ + ++ + A+ G ++ A +S
Sbjct: 423 SLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLARAGRVEEALDMINSEKL 482
Query: 493 KN 494
N
Sbjct: 483 DN 484
Score = 192 bits (488), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 119/392 (30%), Positives = 203/392 (51%), Gaps = 10/392 (2%)
Query: 70 FVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTF 129
++ G MD A LF KM + D W ++ GF+ G + ++FY M+ EG G D
Sbjct: 161 YMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVM 220
Query: 130 PFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPL 189
+++A G L G+ VHG L + GL ++ V SL+DMY K GF+EVA +VF M
Sbjct: 221 LGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMF 280
Query: 190 RDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEI 249
+ VSW +++G+ G K+ EM LG +PD ++++ L CS ++ G+ +
Sbjct: 281 KTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLV 340
Query: 250 HCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHF 309
HC +++ + LD + T+L+DMY+KCG + + +F + K++V WN MI Y I+G+
Sbjct: 341 HCYILKRHV-LDRVTATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNG 399
Query: 310 LESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFL-PHLVLETA 368
E + +M E N+ PD T +LL + S G + +G+ I K + P
Sbjct: 400 QEVVSLFLKMTESNIEPDHATFASLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYVC 459
Query: 369 LVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLK-- 426
L+D+ + G+++ A IN + + + I A + N L + N+ L+
Sbjct: 460 LIDLLARAGRVEEA---LDMINSEKLDNALPIWVALLSGCINHRNLSVGDIAANKILQLN 516
Query: 427 PDAVTIASILPAYAELATVSECKQIHAYITKL 458
PD++ I +++ + AT ++ K++ A + KL
Sbjct: 517 PDSIGIQTLVSNF--FATANKWKEV-AKVRKL 545
>AT2G02750.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:771641-773482 REVERSE
Length = 613
Score = 320 bits (819), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 186/582 (31%), Positives = 314/582 (53%), Gaps = 47/582 (8%)
Query: 125 DNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVF 184
+ FTFP ++K+C +L ++G+ +H +++K G D++ +L+ MY K V A KV
Sbjct: 30 NKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKVL 89
Query: 185 EAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVR 244
+ MP R + S N V+G G + F + G + +++ S LGGC +
Sbjct: 90 DEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCGD---IE 146
Query: 245 GGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYA 304
GG ++HC +++G E+++ V TSL+ MY++CG+ A R+F ++ K++V +NA I G
Sbjct: 147 GGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLM 206
Query: 305 ING--HFLES-FTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLP 361
NG + + S F +++ + P+ +T +N + +C+ L G+ +HG ++K F
Sbjct: 207 ENGVMNLVPSVFNLMRKFSSEE--PNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQF 264
Query: 362 HLVLETALVDMYGKCGQLKFAECVFGRINE-KNMVSWNAIIAAYVQNGRNEEALELFHCL 420
++ TAL+DMY KC K A VF + + +N++SWN++I+ + NG++E A+ELF L
Sbjct: 265 ETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKL 324
Query: 421 RNQTLKPDAVTIASILPAYAELATVSEC-------------------------------- 448
++ LKPD+ T S++ +++L V E
Sbjct: 325 DSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTL 384
Query: 449 ---KQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMS--FKNLVSWNTMIM 503
K+IH ++ K + F +++ MY KCG ARR FD K+ V WN MI
Sbjct: 385 KNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMIS 444
Query: 504 AYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNID 563
Y HG +I++F +++ +EP+ +TF ++LS+CS G V +G ++F M+ +Y
Sbjct: 445 GYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYK 504
Query: 564 YGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTASRNNNDIFFAEFAAKH 623
EH GCM+DLLGR+G L AK+ I++M ++ SLL + R + D E AA
Sbjct: 505 PSTEHIGCMIDLLGRSGRLREAKEVIDQMSEPSSSVY-SSLLGSCRQHLDPVLGEEAAMK 563
Query: 624 ILSHDNDNTGCYVLLANMYAEAGRWEDVEQIKLVMKKKGLAK 665
+ + +N +V+L+++YA RWEDVE I+ V+ +K L K
Sbjct: 564 LAELEPENPAPFVILSSIYAALERWEDVESIRQVIDQKQLVK 605
Score = 155 bits (392), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 94/338 (27%), Positives = 176/338 (52%), Gaps = 5/338 (1%)
Query: 221 LGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDY 280
L P++ + L C+ V G+ +H QV++ G +D+ T+L+ MY K +V
Sbjct: 25 LSHSPNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTD 84
Query: 281 AERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSK 340
A +V +EM + I + NA + G NG ++F + +++T+ ++L C
Sbjct: 85 ALKVLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGC-- 142
Query: 341 FGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAI 400
G + G +H A++ F + + T+LV MY +CG+ A +F ++ K++V++NA
Sbjct: 143 -GDIEGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAF 201
Query: 401 IAAYVQNGRNEEALELFHCLRN-QTLKPDAVTIASILPAYAELATVSECKQIHAYITKLE 459
I+ ++NG +F+ +R + +P+ VT + + A A L + +Q+H + K E
Sbjct: 202 ISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKE 261
Query: 460 LSSNTFTSNAIVYMYAKCGDLQTARRYFDSM-SFKNLVSWNTMIMAYAIHGFGTISIQLF 518
T A++ MY+KC ++A F + +NL+SWN++I I+G +++LF
Sbjct: 262 FQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELF 321
Query: 519 SRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSM 556
++ G++P+ +T+ SL+S S G V E ++ F M
Sbjct: 322 EKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERM 359
Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 111/235 (47%), Gaps = 31/235 (13%)
Query: 73 SGAMDNALYLFEKMN----QPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFT 128
+G + A+ LFEK++ +PD+ WN +I GFS G E F+ RM +
Sbjct: 311 NGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKC 370
Query: 129 FPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKV---FE 185
++ AC + + GK++HG +IK +RDI+V SLIDMY K G A ++ FE
Sbjct: 371 LTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFE 430
Query: 186 AMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRG 245
P +D V WN M++GY G+ ++ F+ + +P + + L CS
Sbjct: 431 PKP-KDPVFWNVMISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACS------- 482
Query: 246 GKEIHCQVIRNGLELDIMVQTS------------LIDMYAKCGKVDYAERVFNEM 288
HC + G ++ ++Q +ID+ + G++ A+ V ++M
Sbjct: 483 ----HCGNVEKGSQIFRLMQEEYGYKPSTEHIGCMIDLLGRSGRLREAKEVIDQM 533
>AT4G20770.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:11130762-11132984 REVERSE
Length = 740
Score = 319 bits (818), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 198/671 (29%), Positives = 341/671 (50%), Gaps = 78/671 (11%)
Query: 74 GAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVI 133
G + A +F+ M + D WN +I KG ++ + Y RM +G FT V+
Sbjct: 52 GDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVL 111
Query: 134 KACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGF-VEVAEKVFEAMPLRDL 192
AC ++L + G + HG +K GLD++I+V N+L+ MY K GF V+ +VFE++ +
Sbjct: 112 SACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNE 171
Query: 193 VSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDR------LSMISSLGGCSIGCCVRG- 245
VS+ ++ G L+++ F+ M G + D LS+ + GC + G
Sbjct: 172 VSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGN 231
Query: 246 --GKEIHCQVIR-----------------------NGLEL-------------DIMV--- 264
GK+IHC +R NG EL +IM+
Sbjct: 232 ELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGF 291
Query: 265 ------------------------QTSLIDMYAKC---GKVDYAERVFNEMTCKNIVAWN 297
+ + I + C G V+ R+F+ + ++ AWN
Sbjct: 292 GQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQPSVSAWN 351
Query: 298 AMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRK 357
AM+ GY+ H+ E+ + ++MQ NL PD T+ +L SC++ L GK IHG IR
Sbjct: 352 AMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRT 411
Query: 358 MFLPHLVLETALVDMYGKCGQLKFAECVFGR-INEKNMVSWNAIIAAYVQNGRNEEALEL 416
+ + + L+ +Y +C +++ +EC+F INE ++ WN++I+ + N + +AL L
Sbjct: 412 EISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALIL 471
Query: 417 FHCL-RNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYA 475
F + + L P+ + A++L + + L ++ +Q H + K S++F A+ MY
Sbjct: 472 FRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYC 531
Query: 476 KCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVS 535
KCG++ +AR++FD++ KN V WN MI Y +G G ++ L+ +M +G +P+ TFVS
Sbjct: 532 KCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVS 591
Query: 536 LLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLV 595
+L++CS SGLV G E+ +SM+ + I+ ++HY C+VD LGR G L+ A++ E P
Sbjct: 592 VLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYK 651
Query: 596 PTARIWGSLLTASRNNNDIFFAEFAAKHILSHDNDNTGCYVLLANMYAEAGRWEDVEQIK 655
++ +W LL++ R + D+ A A+ ++ D ++ YVLL+N Y+ +W+D ++
Sbjct: 652 SSSVLWEILLSSCRVHGDVSLARRVAEKLMRLDPQSSAAYVLLSNTYSSLRQWDDSAALQ 711
Query: 656 LVMKKKGLAKT 666
+M K + KT
Sbjct: 712 GLMNKNRVHKT 722
Score = 172 bits (435), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 118/393 (30%), Positives = 192/393 (48%), Gaps = 45/393 (11%)
Query: 159 RDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEM 218
RD+Y N+ + K G + A +VF+ MP RD+VSWN M++ G K+L+ +K M
Sbjct: 36 RDVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRM 95
Query: 219 LGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCG-K 277
+ G P R ++ S L CS G H ++ GL+ +I V +L+ MYAKCG
Sbjct: 96 VCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFI 155
Query: 278 VDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLP- 336
VDY RVF ++ N V++ A+IGG A LE+ + M E + D++ + N+L
Sbjct: 156 VDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSI 215
Query: 337 -----SCSKFGTLLE---GKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGR 388
C + GK IH A+R F L L +L+++Y K + AE +F
Sbjct: 216 SAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAE 275
Query: 389 INEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSEC 448
+ E N+VSWN +I + Q R+++++E +R+ +P+ VT S+L A
Sbjct: 276 MPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGA---------- 325
Query: 449 KQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIH 508
F S GD++T RR F S+ ++ +WN M+ Y+ +
Sbjct: 326 ---------------CFRS----------GDVETGRRIFSSIPQPSVSAWNAMLSGYSNY 360
Query: 509 GFGTISIQLFSRMKQNGIEPNESTFVSLLSSCS 541
+I F +M+ ++P+++T +LSSC+
Sbjct: 361 EHYEEAISNFRQMQFQNLKPDKTTLSVILSSCA 393
Score = 169 bits (427), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 99/336 (29%), Positives = 173/336 (51%), Gaps = 15/336 (4%)
Query: 57 KPNSLSLTRSLCEFVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHR 116
+PN ++ L SG ++ +F + QP WN ++ G+SN ++E I + +
Sbjct: 313 QPNEVTCISVLGACFRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQ 372
Query: 117 MEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGF 176
M+++ + D T ++ +C RL GK++HG +I+ + ++ ++ + LI +Y +
Sbjct: 373 MQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEK 432
Query: 177 VEVAEKVFE-AMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEK-PDRLSMISSL 234
+E++E +F+ + D+ WN M++G+R K+L+ F+ M P+ S + L
Sbjct: 433 MEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVL 492
Query: 235 GGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIV 294
CS C + G++ H V+++G D V+T+L DMY KCG++D A + F+ + KN V
Sbjct: 493 SSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTV 552
Query: 295 AWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEG------- 347
WN MI GY NG E+ ++M PD IT +++L +CS G + G
Sbjct: 553 IWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSM 612
Query: 348 KCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAE 383
+ IHG P L +VD G+ G+L+ AE
Sbjct: 613 QRIHGIE------PELDHYICIVDCLGRAGRLEDAE 642
Score = 148 bits (373), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 97/341 (28%), Positives = 168/341 (49%), Gaps = 41/341 (12%)
Query: 257 GLELDIMVQTSLIDMYAKCGKVDYAERVFNEMT--------------CK----------- 291
G++ D + L+D+Y +CG DYA +VF+EM+ CK
Sbjct: 2 GMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCKVGDLGEACEVF 61
Query: 292 ------NIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLL 345
++V+WN MI G ++ KRM D +P T+ ++L +CSK +
Sbjct: 62 DGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVLSACSKVLDGV 121
Query: 346 EGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQL-KFAECVFGRINEKNMVSWNAIIAAY 404
G HG A++ ++ + AL+ MY KCG + + VF +++ N VS+ A+I
Sbjct: 122 FGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGL 181
Query: 405 VQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELA---TVSEC------KQIHAYI 455
+ + EA+++F + + ++ D+V +++IL A ++SE KQIH
Sbjct: 182 ARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLA 241
Query: 456 TKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISI 515
+L + +N+++ +YAK D+ A F M N+VSWN MI+ + S+
Sbjct: 242 LRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSV 301
Query: 516 QLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSM 556
+ +RM+ +G +PNE T +S+L +C SG V G +F+S+
Sbjct: 302 EFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSI 342
>AT1G31920.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11461864-11463684 REVERSE
Length = 606
Score = 319 bits (817), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 177/536 (33%), Positives = 292/536 (54%), Gaps = 7/536 (1%)
Query: 273 AKCG------KVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIP 326
AKC ++YA +F + +N MI GY F E+ M + P
Sbjct: 71 AKCAHSGWENSMNYAASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEP 130
Query: 327 DAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVF 386
D T LL +C++ ++ EGK IHG + + ++ +L++MYG+CG+++ + VF
Sbjct: 131 DNFTYPCLLKACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVF 190
Query: 387 GRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQT-LKPDAVTIASILPAYAELATV 445
++ K SW+++++A G E L LF + ++T LK + + S L A A +
Sbjct: 191 EKLESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGAL 250
Query: 446 SECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAY 505
+ IH ++ + N ++V MY KCG L A F M +N ++++ MI
Sbjct: 251 NLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGL 310
Query: 506 AIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYG 565
A+HG G ++++FS+M + G+EP+ +VS+L++CS SGLV EG +F M + ++
Sbjct: 311 ALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPT 370
Query: 566 IEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTASRNNNDIFFAEFAAKHIL 625
EHYGC+VDLLGR G L+ A + I+ +P+ IW + L+ R +I + AA+ +L
Sbjct: 371 AEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELL 430
Query: 626 SHDNDNTGCYVLLANMYAEAGRWEDVEQIKLVMKKKGLAKTVDCCTVESKGKSQKFINNN 685
+ N G Y+L++N+Y++ W+DV + + + KGL +T VE KGK+ +F++ +
Sbjct: 431 KLSSHNPGDYLLISNLYSQGQMWDDVARTRTEIAIKGLKQTPGFSIVELKGKTHRFVSQD 490
Query: 686 KSHQQAYMIYDVLDIILKKIGEDVYIHSLSKFRPADVIKKKMKSPQNHSVKLAICFGLIS 745
+SH + IY +L + ++ + Y L++ ++K + + HS K+AI FGL+
Sbjct: 491 RSHPKCKEIYKMLHQMEWQLKFEGYSPDLTQILLNVDEEEKKERLKGHSQKVAIAFGLLY 550
Query: 746 TAIGKPIIIRKNTRICKDCHIAAKKISRVTKREIIVGDSKIFHHFEDGRCSCGDYW 801
T G I I +N R+C DCH KKIS + +REI+V D FH F+ G CSC DYW
Sbjct: 551 TPPGSIIKIARNLRMCSDCHTYTKKISMIYEREIVVRDRNRFHLFKGGTCSCKDYW 606
Score = 198 bits (503), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 115/331 (34%), Positives = 192/331 (58%), Gaps = 3/331 (0%)
Query: 75 AMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIK 134
+M+ A +F ++ P T+ +N +IRG+ N F+E + FY+ M G DNFT+P ++K
Sbjct: 81 SMNYAASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLK 140
Query: 135 ACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVS 194
AC RL S EGK++HG++ K+GL+ D++V NSLI+MY + G +E++ VFE + + S
Sbjct: 141 ACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAAS 200
Query: 195 WNCMVNGYRVIGDGLKSLMCFKEMLG-LGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQV 253
W+ MV+ +G + L+ F+ M K + M+S+L C+ + G IH +
Sbjct: 201 WSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFL 260
Query: 254 IRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESF 313
+RN EL+I+VQTSL+DMY KCG +D A +F +M +N + ++AMI G A++G +
Sbjct: 261 LRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESAL 320
Query: 314 TCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFL-PHLVLETALVDM 372
+M ++ L PD + +++L +CS G + EG+ + +++ + P LVD+
Sbjct: 321 RMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDL 380
Query: 373 YGKCGQLKFA-ECVFGRINEKNMVSWNAIIA 402
G+ G L+ A E + EKN V W ++
Sbjct: 381 LGRAGLLEEALETIQSIPIEKNDVIWRTFLS 411
>AT3G15930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5387444-5389690 FORWARD
Length = 687
Score = 316 bits (810), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 178/575 (30%), Positives = 306/575 (53%), Gaps = 32/575 (5%)
Query: 175 GFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSL 234
G V A K+F +P D+V WN M+ G+ + + + + ML G PD + L
Sbjct: 82 GHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLL 141
Query: 235 GGCSI-GCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNI 293
G G + GK++HC V++ GL ++ VQ +L+ MY+ CG +D A VF+ +++
Sbjct: 142 NGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDV 201
Query: 294 VAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGY 353
+WN MI GY + ES L M+ + + P ++T++ +L +CSK K +H Y
Sbjct: 202 FSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEY 261
Query: 354 AIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNE-- 411
P L LE ALV+ Y CG++ A +F + ++++SW +I+ YV+ G +
Sbjct: 262 VSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLA 321
Query: 412 -----------------------------EALELFHCLRNQTLKPDAVTIASILPAYAEL 442
E+LE+F +++ + PD T+ S+L A A L
Sbjct: 322 RTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHL 381
Query: 443 ATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMI 502
++ + I YI K ++ ++ NA++ MY KCG + A++ F M ++ +W M+
Sbjct: 382 GSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMV 441
Query: 503 MAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNI 562
+ A +G G +I++F +M+ I+P++ T++ +LS+C+ SG+V++ + F M+ D+ I
Sbjct: 442 VGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRI 501
Query: 563 DYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTASRNNNDIFFAEFAAK 622
+ + HYGCMVD+LGR G + A + + +MP+ P + +WG+LL ASR +ND AE AAK
Sbjct: 502 EPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAK 561
Query: 623 HILSHDNDNTGCYVLLANMYAEAGRWEDVEQIKLVMKKKGLAKTVDCCTVESKGKSQKFI 682
IL + DN Y LL N+YA RW+D+ +++ + + KT +E G + +F+
Sbjct: 562 KILELEPDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFV 621
Query: 683 NNNKSHQQAYMIYDVLDIILKKIGEDVYIHSLSKF 717
+KSH Q+ IY L+ + ++ Y+ S+
Sbjct: 622 AGDKSHLQSEEIYMKLEELAQESTFAAYLPDTSEL 656
Score = 204 bits (519), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 139/542 (25%), Positives = 262/542 (48%), Gaps = 43/542 (7%)
Query: 38 RKSNPTKKQMSETPKRGMIKPNSLSLTRSLCEFVDS---GAMDNALYLFEKMNQPDTYIW 94
+ ++ K+ S++ RG + PN + + L F S G + A LF K+ +PD +W
Sbjct: 45 KTTDQFKQLHSQSITRG-VAPNP-TFQKKLFVFWCSRLGGHVSYAYKLFVKIPEPDVVVW 102
Query: 95 NVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIE-GKKVHGKLI 153
N +I+G+S E + Y M EG+ D+ TFPF++ R + GKK+H ++
Sbjct: 103 NNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVV 162
Query: 154 KIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLM 213
K GL ++YV N+L+ MY G +++A VF+ D+ SWN M++GY + + +S+
Sbjct: 163 KFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIE 222
Query: 214 CFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYA 273
EM P ++++ L CS K +H V E + ++ +L++ YA
Sbjct: 223 LLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYA 282
Query: 274 KCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGH------------------------- 308
CG++D A R+F M +++++W +++ GY G+
Sbjct: 283 ACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDG 342
Query: 309 ------FLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPH 362
F ES + MQ +IPD TM+++L +C+ G+L G+ I Y +
Sbjct: 343 YLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKND 402
Query: 363 LVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRN 422
+V+ AL+DMY KCG + A+ VF +++++ +W A++ NG+ +EA+++F +++
Sbjct: 403 VVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQD 462
Query: 423 QTLKPDAVTIASILPAYAELATVSECKQIHAYI-TKLELSSNTFTSNAIVYMYAKCGDLQ 481
+++PD +T +L A V + ++ A + + + + +V M + G ++
Sbjct: 463 MSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVK 522
Query: 482 TARRYFDSMSFK-NLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSC 540
A M N + W ++ A +H ++ ++ + +EP+ +LL C
Sbjct: 523 EAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILE--LEPDNGAVYALL--C 578
Query: 541 SI 542
+I
Sbjct: 579 NI 580
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 140/300 (46%), Gaps = 8/300 (2%)
Query: 53 RGMIKPNSLSLTRSLCEFVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVID 112
R M + +S T + +V+ G + A F++M D W ++I G+ G F E ++
Sbjct: 295 RSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLE 354
Query: 113 FYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYF 172
+ M+ G+ D FT V+ AC L S G+ + + K + D+ V N+LIDMYF
Sbjct: 355 IFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYF 414
Query: 173 KFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMIS 232
K G E A+KVF M RD +W MV G G G +++ F +M + +PD ++ +
Sbjct: 415 KCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLG 474
Query: 233 SLGGCSIGCCVRGGKEIHCQVIRNG-LELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCK 291
L C+ V ++ ++ + +E ++ ++DM + G V A + +M
Sbjct: 475 VLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMN 534
Query: 292 -NIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDA----ITMINLLPSCSKFGTLLE 346
N + W A++G ++ + K++ E L PD + N+ C ++ L E
Sbjct: 535 PNSIVWGALLGASRLHNDEPMAELAAKKILE--LEPDNGAVYALLCNIYAGCKRWKDLRE 592
>AT2G34400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:14516238-14518186 FORWARD
Length = 617
Score = 316 bits (809), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 174/556 (31%), Positives = 304/556 (54%), Gaps = 12/556 (2%)
Query: 129 FPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMP 188
F F++K C +S + +++ +++ +++ N LI + G + +F
Sbjct: 36 FLFLLKKC---ISVNQLRQIQAQMLLHSVEKP----NFLIPKAVELGDFNYSSFLFSVTE 88
Query: 189 LRDLVSWNCMVNGY-RVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGK 247
+ S+N M+ G D +L ++ M G KPD+ + C+ + G+
Sbjct: 89 EPNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGR 148
Query: 248 EIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAING 307
+H + + GLE D+ + SLI MYAKCG+V YA ++F+E+T ++ V+WN+MI GY+ G
Sbjct: 149 SVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAG 208
Query: 308 HFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLET 367
+ ++ ++M+E+ PD T++++L +CS G L G+ + AI K L +
Sbjct: 209 YAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGS 268
Query: 368 ALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKP 427
L+ MYGKCG L A VF ++ +K+ V+W A+I Y QNG++ EA +LF + + P
Sbjct: 269 KLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSP 328
Query: 428 DAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYF 487
DA T++++L A + + KQI + ++L L N + + +V MY KCG ++ A R F
Sbjct: 329 DAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVF 388
Query: 488 DSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVN 547
++M KN +WN MI AYA G ++ LF RM + P++ TF+ +LS+C +GLV+
Sbjct: 389 EAMPVKNEATWNAMITAYAHQGHAKEALLLFDRM---SVPPSDITFIGVLSACVHAGLVH 445
Query: 548 EGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTA 607
+G F+ M + + IEHY ++DLL R G LD A +F+E P P + ++L A
Sbjct: 446 QGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAAILGA 505
Query: 608 SRNNNDIFFAEFAAKHILS-HDNDNTGCYVLLANMYAEAGRWEDVEQIKLVMKKKGLAKT 666
D+ E A + ++ + N G YV+ +N+ A+ W++ +++ +M+ +G+ KT
Sbjct: 506 CHKRKDVAIREKAMRMLMEMKEAKNAGNYVISSNVLADMKMWDESAKMRALMRDRGVVKT 565
Query: 667 VDCCTVESKGKSQKFI 682
C +E +G+ +F+
Sbjct: 566 PGCSWIEIEGELMEFL 581
Score = 255 bits (651), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 161/490 (32%), Positives = 251/490 (51%), Gaps = 13/490 (2%)
Query: 4 KLSHSYF--FNSYKPDDASFKQMGAPKRDLL-VNPRIRKSNPTKKQMSETPKRGMIKPNS 60
KL+ S + F +KP + G +RD L + + N ++ ++ + KPN
Sbjct: 7 KLAFSIYRQFPKFKPRQFEEARRGDLERDFLFLLKKCISVNQLRQIQAQMLLHSVEKPNF 66
Query: 61 LSLTRSLCEFVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEV-IDFYHRMEY 119
L + + V+ G + + +LF +P+ Y +N +IRG +N E + Y RM++
Sbjct: 67 L-----IPKAVELGDFNYSSFLFSVTEEPNHYSFNYMIRGLTNTWNDHEAALSLYRRMKF 121
Query: 120 EGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEV 179
G+ D FT+ FV AC +L G+ VH L K+GL+RD+++ +SLI MY K G V
Sbjct: 122 SGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGY 181
Query: 180 AEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSI 239
A K+F+ + RD VSWN M++GY G ++ F++M G +PD +++S LG CS
Sbjct: 182 ARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSH 241
Query: 240 GCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAM 299
+R G+ + I + L + + LI MY KCG +D A RVFN+M K+ VAW AM
Sbjct: 242 LGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAM 301
Query: 300 IGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMF 359
I Y+ NG E+F M++ + PDA T+ +L +C G L GK I +A
Sbjct: 302 ITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSL 361
Query: 360 LPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHC 419
++ + T LVDMYGKCG+++ A VF + KN +WNA+I AY G +EAL LF
Sbjct: 362 QHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFD- 420
Query: 420 LRNQTLKPDAVTIASILPAYAELATVSE-CKQIHAYITKLELSSNTFTSNAIVYMYAKCG 478
++ P +T +L A V + C+ H + L I+ + ++ G
Sbjct: 421 --RMSVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAG 478
Query: 479 DLQTARRYFD 488
L A + +
Sbjct: 479 MLDEAWEFME 488
>AT1G71460.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:26928247-26930316 REVERSE
Length = 689
Score = 314 bits (805), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 176/557 (31%), Positives = 303/557 (54%), Gaps = 8/557 (1%)
Query: 38 RKSNPTKKQMSETPKRGMIKPNSLSLTRSLCEFVDSGAMDNALYLFEKMNQPDTYIWNVI 97
RKS KQ+ + ++ N T+ + + G++ +A +F++ + Y WN +
Sbjct: 124 RKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNAL 183
Query: 98 IRG--FSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKI 155
+RG S K +Q+V+ + M G+ ++ ++ V K+ + +G K H IK
Sbjct: 184 LRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKN 243
Query: 156 GLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCF 215
GL +++ SL+DMYFK G V +A +VF+ + RD+V W M+ G ++L F
Sbjct: 244 GLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLF 303
Query: 216 KEMLGLGEK--PDRLSMISSLGGCSIGCCVRGGKEIHCQVIR--NGLELDIMVQTSLIDM 271
+ M+ EK P+ + + + L ++ GKE+H V++ N +E V + LID+
Sbjct: 304 RTMIS-EEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVE-QPFVHSGLIDL 361
Query: 272 YAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITM 331
Y KCG + RVF +N ++W A++ GYA NG F ++ + MQ++ PD +T+
Sbjct: 362 YCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTI 421
Query: 332 INLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINE 391
+LP C++ + +GK IH YA++ +FLP++ L T+L+ MY KCG ++ +F R+ +
Sbjct: 422 ATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQ 481
Query: 392 KNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQI 451
+N+ +W A+I YV+N +E+F + +PD+VT+ +L ++L + K++
Sbjct: 482 RNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKEL 541
Query: 452 HAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFG 511
H +I K E S F S I+ MY KCGDL++A FD+++ K ++W +I AY +
Sbjct: 542 HGHILKKEFESIPFVSARIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGCNELF 601
Query: 512 TISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGC 571
+I F +M G PN TF ++LS CS +G V+E + FN M YN+ EHY
Sbjct: 602 RDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEEHYSL 661
Query: 572 MVDLLGRTGNLDAAKQF 588
+++LL R G ++ A++
Sbjct: 662 VIELLNRCGRVEEAQRL 678
Score = 244 bits (623), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 157/536 (29%), Positives = 265/536 (49%), Gaps = 16/536 (2%)
Query: 29 RDLLVNPRIRKS---NPTKKQMSETPKRGMIKPN-----SLSLTRSLCEFVDSGAMDNAL 80
RDL + + S P + P + I+P+ S S + F + A ++L
Sbjct: 10 RDLPASLSVTTSLNHRPHRSDKDGAPAKSPIRPSRTRRPSTSPAKKPKPFRERDAFPSSL 69
Query: 81 YLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLL 140
L K + YI + I+ F+ + + + +E GI ++ TF +++AC R
Sbjct: 70 PLHSK----NPYIIHRDIQIFARQNNLEVALTILDYLEQRGIPVNATTFSALLEACVRRK 125
Query: 141 SFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVN 200
S + GK+VH + GL+ + ++ L+ MY G V+ A+KVF+ ++ SWN ++
Sbjct: 126 SLLHGKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLR 185
Query: 201 GYRVIGDGLKS--LMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGL 258
G + G L F EM LG + S+ + + +R G + H I+NGL
Sbjct: 186 GTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGL 245
Query: 259 ELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKR 318
+ ++TSL+DMY KCGKV A RVF+E+ ++IV W AMI G A N E+ +
Sbjct: 246 FNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRT 305
Query: 319 M-QEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIR-KMFLPHLVLETALVDMYGKC 376
M E+ + P+++ + +LP L GK +H + ++ K ++ + + L+D+Y KC
Sbjct: 306 MISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKC 365
Query: 377 GQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASIL 436
G + VF ++N +SW A+++ Y NGR ++AL ++ + +PD VTIA++L
Sbjct: 366 GDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVL 425
Query: 437 PAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLV 496
P AEL + + K+IH Y K N +++ MY+KCG + R FD + +N+
Sbjct: 426 PVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVK 485
Query: 497 SWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWEL 552
+W MI Y + I++F M + P+ T +L+ CS + G EL
Sbjct: 486 AWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKEL 541
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 108/234 (46%), Gaps = 22/234 (9%)
Query: 389 INEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSEC 448
++ KN + I + + E AL + L + + +A T +++L A ++
Sbjct: 71 LHSKNPYIIHRDIQIFARQNNLEVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHG 130
Query: 449 KQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIH 508
KQ+H +I L SN F +V+MY CG ++ A++ FD + N+ SWN ++ I
Sbjct: 131 KQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVIS 190
Query: 509 GFGTIS--IQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWE---------LFNSMK 557
G + F+ M++ G++ N + ++ S + + + +G + LFNS+
Sbjct: 191 GKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVF 250
Query: 558 MDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTASRNN 611
+ + +VD+ + G + A++ +E+ + +WG+++ +N
Sbjct: 251 LKTS----------LVDMYFKCGKVGLARRVFDEI-VERDIVVWGAMIAGLAHN 293
>AT2G22410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9509035-9511080 FORWARD
Length = 681
Score = 314 bits (805), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 193/616 (31%), Positives = 312/616 (50%), Gaps = 45/616 (7%)
Query: 126 NFTFPFVIKACGRLLSFIEG-------KKVHGKLIKIGLDRDIYVCNSLIDM--YFKFGF 176
N T FV+ LLS +E K++ ++I GL D + + LI + +
Sbjct: 45 NSTHSFVLH--NPLLSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRY 102
Query: 177 VEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLG---EKPDRLSMISS 233
++ + K+ + + ++ SWN + G+ + +S + +K+ML G +PD +
Sbjct: 103 LDYSVKILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVL 162
Query: 234 LGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNI 293
C+ G I V++ LEL V + I M+A CG ++ A +VF+E +++
Sbjct: 163 FKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDL 222
Query: 294 VAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGY 353
V+WN +I GY G ++ K M+ + + PD +TMI L+ SCS G L GK + Y
Sbjct: 223 VSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEY 282
Query: 354 AIRKMFLPHLVLETALVDMYGKCGQLK-----------------------FAEC------ 384
+ L AL+DM+ KCG + +A C
Sbjct: 283 VKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVS 342
Query: 385 --VFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAEL 442
+F + EK++V WNA+I VQ R ++AL LF ++ KPD +T+ L A ++L
Sbjct: 343 RKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQL 402
Query: 443 ATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMI 502
+ IH YI K LS N ++V MYAKCG++ A F + +N +++ +I
Sbjct: 403 GALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAII 462
Query: 503 MAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNI 562
A+HG + +I F+ M GI P+E TF+ LLS+C G++ G + F+ MK +N+
Sbjct: 463 GGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNL 522
Query: 563 DYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTASRNNNDIFFAEFAAK 622
+ ++HY MVDLLGR G L+ A + +E MP+ A +WG+LL R + ++ E AAK
Sbjct: 523 NPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAK 582
Query: 623 HILSHDNDNTGCYVLLANMYAEAGRWEDVEQIKLVMKKKGLAKTVDCCTVESKGKSQKFI 682
+L D ++G YVLL MY EA WED ++ + +M ++G+ K C ++E G +FI
Sbjct: 583 KLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNGIVCEFI 642
Query: 683 NNNKSHQQAYMIYDVL 698
+KS ++ IYD L
Sbjct: 643 VRDKSRPESEKIYDRL 658
Score = 235 bits (600), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 150/519 (28%), Positives = 255/519 (49%), Gaps = 38/519 (7%)
Query: 55 MIKPNSLSLTRSLCEFVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFY 114
++ P + S + C +S +D ++ + + + P+ + WNV IRGFS +E Y
Sbjct: 82 ILDPFASSRLIAFCALSESRYLDYSVKILKGIENPNIFSWNVTIRGFSESENPKESFLLY 141
Query: 115 HRMEYEGI---GIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMY 171
+M G D+FT+P + K C L G + G ++K+ L+ +V N+ I M+
Sbjct: 142 KQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMF 201
Query: 172 FKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMI 231
G +E A KVF+ P+RDLVSWNC++NGY+ IG+ K++ +K M G KPD ++MI
Sbjct: 202 ASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMI 261
Query: 232 SSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDM-------------------- 271
+ CS+ + GKE + V NGL + I + +L+DM
Sbjct: 262 GLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKR 321
Query: 272 -----------YAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQ 320
YA+CG +D + ++F++M K++V WNAMIGG ++ + MQ
Sbjct: 322 TIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQ 381
Query: 321 EDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLK 380
N PD ITMI+ L +CS+ G L G IH Y + ++ L T+LVDMY KCG +
Sbjct: 382 TSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNIS 441
Query: 381 FAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYA 440
A VF I +N +++ AII +G A+ F+ + + + PD +T +L A
Sbjct: 442 EALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACC 501
Query: 441 ELATVSECKQIHAYI-TKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFK-NLVSW 498
+ + + + ++ L+ + +V + + G L+ A R +SM + + W
Sbjct: 502 HGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVW 561
Query: 499 NTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLL 537
++ +HG + + ++ + ++P++S LL
Sbjct: 562 GALLFGCRMHGNVELGEKAAKKLLE--LDPSDSGIYVLL 598
>AT4G38010.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:17859582-17861261 REVERSE
Length = 559
Score = 314 bits (804), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 184/547 (33%), Positives = 296/547 (54%), Gaps = 11/547 (2%)
Query: 132 VIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFG-FVEVAEKVFEAM-PL 189
+I C L F K++ +LI L RD + N ++ K F + + ++ +
Sbjct: 12 LISRCSSLRVF---KQIQTQLITRDLLRDDLIINKVVTFLGKSADFASYSSVILHSIRSV 68
Query: 190 RDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEI 249
S+N +++ Y V ++ +K + G PD + C +R GK+I
Sbjct: 69 LSSFSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQI 128
Query: 250 HCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHF 309
H V + G DI VQ SL+ Y CG+ A +VF EM +++V+W +I G+ G +
Sbjct: 129 HGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLY 188
Query: 310 LESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETAL 369
E+ +M + P+ T + +L S + G L GK IHG +++ L L AL
Sbjct: 189 KEALDTFSKMDVE---PNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNAL 245
Query: 370 VDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQT-LKPD 428
+DMY KC QL A VFG + +K+ VSWN++I+ V R++EA++LF ++ + +KPD
Sbjct: 246 IDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPD 305
Query: 429 AVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFD 488
+ S+L A A L V + +H YI + +T AIV MYAKCG ++TA F+
Sbjct: 306 GHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFN 365
Query: 489 SMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNE 548
+ KN+ +WN ++ AIHG G S++ F M + G +PN TF++ L++C +GLV+E
Sbjct: 366 GIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDE 425
Query: 549 GWELFNSMK-MDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTA 607
G F+ MK +YN+ +EHYGCM+DLL R G LD A + ++ MP+ P RI G++L+A
Sbjct: 426 GRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRICGAILSA 485
Query: 608 SRNNNDIF-FAEFAAKHILSHDNDNTGCYVLLANMYAEAGRWEDVEQIKLVMKKKGLAKT 666
+N + + L + +++G YVLL+N++A RW+DV +I+ +MK KG++K
Sbjct: 486 CKNRGTLMELPKEILDSFLDIEFEDSGVYVLLSNIFAANRRWDDVARIRRLMKVKGISKV 545
Query: 667 VDCCTVE 673
+E
Sbjct: 546 PGSSYIE 552
Score = 181 bits (459), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 111/338 (32%), Positives = 169/338 (50%), Gaps = 4/338 (1%)
Query: 114 YHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFK 173
Y G D FTFP V KACG+ EGK++HG + K+G DIYV NSL+ Y
Sbjct: 94 YKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHGIVTKMGFYDDIYVQNSLVHFYGV 153
Query: 174 FGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISS 233
G A KVF MP+RD+VSW ++ G+ G ++L F +M +P+ + +
Sbjct: 154 CGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSKM---DVEPNLATYVCV 210
Query: 234 LGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNI 293
L C+ GK IH +++ + + +LIDMY KC ++ A RVF E+ K+
Sbjct: 211 LVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDK 270
Query: 294 VAWNAMIGGYAINGHFLESFTCLKRMQEDNLI-PDAITMINLLPSCSKFGTLLEGKCIHG 352
V+WN+MI G E+ MQ + I PD + ++L +C+ G + G+ +H
Sbjct: 271 VSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHE 330
Query: 353 YAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEE 412
Y + + TA+VDMY KCG ++ A +F I KN+ +WNA++ +G E
Sbjct: 331 YILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLE 390
Query: 413 ALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQ 450
+L F + KP+ VT + L A V E ++
Sbjct: 391 SLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRR 428
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 118/407 (28%), Positives = 188/407 (46%), Gaps = 49/407 (12%)
Query: 74 GAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVI 133
G NA +F +M D W II GF+ GL++E +D + +M+ E + T+ V+
Sbjct: 155 GESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSKMDVEP---NLATYVCVL 211
Query: 134 KACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLV 193
+ GR+ GK +HG ++K + N+LIDMY K + A +VF + +D V
Sbjct: 212 VSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKV 271
Query: 194 SWNCMVNGYRVIGDGLKSLMCFKEM-LGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQ 252
SWN M++G +++ F M G KPD + S L C+ V G+ +H
Sbjct: 272 SWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEY 331
Query: 253 VIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLES 312
++ G++ D + T+++DMYAKCG ++ A +FN + KN+ WNA++GG AI+GH LES
Sbjct: 332 ILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLES 391
Query: 313 FTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEG-KCIHGYAIRKM-FLPHLVLETALV 370
+ M + P+ +T + L +C G + EG + H R+ P L ++
Sbjct: 392 LRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMI 451
Query: 371 DMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAV 430
D+ + G L +EALEL ++ +KPD
Sbjct: 452 DLLCRAGLL-------------------------------DEALEL---VKAMPVKPDVR 477
Query: 431 TIASILPAYAELATVSEC-KQIHAYITKLE--------LSSNTFTSN 468
+IL A T+ E K+I +E L SN F +N
Sbjct: 478 ICGAILSACKNRGTLMELPKEILDSFLDIEFEDSGVYVLLSNIFAAN 524
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 113/225 (50%), Gaps = 3/225 (1%)
Query: 70 FVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYE-GIGIDNFT 128
+V + +A+ +F ++ + D WN +I G + +E ID + M+ GI D
Sbjct: 249 YVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHI 308
Query: 129 FPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMP 188
V+ AC L + G+ VH ++ G+ D ++ +++DMY K G++E A ++F +
Sbjct: 309 LTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIR 368
Query: 189 LRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGG-CSIGCCVRGGK 247
+++ +WN ++ G + G GL+SL F+EM+ LG KP+ ++ +++L C G G +
Sbjct: 369 SKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRR 428
Query: 248 EIHCQVIRN-GLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCK 291
H R L + +ID+ + G +D A + M K
Sbjct: 429 YFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVK 473
>AT2G37310.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15665102-15667075 REVERSE
Length = 657
Score = 313 bits (802), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 173/606 (28%), Positives = 320/606 (52%), Gaps = 41/606 (6%)
Query: 147 KVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIG 206
++H +++ + D ++ + LI Y + A VF+ + +R+ S+N ++ Y
Sbjct: 43 QLHARIVVFSIKPDNFLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSRE 102
Query: 207 DGLKSLMCFKEMLGL------GEKPDRLSM---ISSLGGCSIGCCVRGGKEIHCQVIRNG 257
+ F +G +PD +S+ + +L GC +++H VIR G
Sbjct: 103 MYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGG 162
Query: 258 LELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLK 317
+ D+ V +I Y KC ++ A +VF+EM+ +++V+WN+MI GY+ +G F + K
Sbjct: 163 FDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYK 222
Query: 318 RMQE-DNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKC 376
M + P+ +T+I++ +C + L+ G +H I L L A++ Y KC
Sbjct: 223 AMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKC 282
Query: 377 GQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTL----------- 425
G L +A +F ++EK+ V++ AII+ Y+ +G +EA+ LF + + L
Sbjct: 283 GSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLM 342
Query: 426 --------------------KPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTF 465
+P+ VT++S+LP+ + + K+IHA+ + +N +
Sbjct: 343 QNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIY 402
Query: 466 TSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNG 525
+ +I+ YAK G L A+R FD+ ++L++W +I AYA+HG + LF +M+ G
Sbjct: 403 VTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLG 462
Query: 526 IEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAA 585
+P++ T ++LS+ + SG + +F+SM Y+I+ G+EHY CMV +L R G L A
Sbjct: 463 TKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDA 522
Query: 586 KQFIEEMPLVPTARIWGSLLTASRNNNDIFFAEFAAKHILSHDNDNTGCYVLLANMYAEA 645
+FI +MP+ P A++WG+LL + D+ A FA + + +NTG Y ++AN+Y +A
Sbjct: 523 MEFISKMPIDPIAKVWGALLNGASVLGDLEIARFACDRLFEMEPENTGNYTIMANLYTQA 582
Query: 646 GRWEDVEQIKLVMKKKGLAKTVDCCTVESKGKSQKFINNNKSHQQAYMIYDVLDIILKKI 705
GRWE+ E ++ MK+ GL K +E++ + FI + S +++ +Y++++ +++ +
Sbjct: 583 GRWEEAEMVRNKMKRIGLKKIPGTSWIETEKGLRSFIAKDSSCERSKEMYEIIEGLVESM 642
Query: 706 GEDVYI 711
+ YI
Sbjct: 643 SDKEYI 648
Score = 200 bits (508), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 140/546 (25%), Positives = 256/546 (46%), Gaps = 46/546 (8%)
Query: 56 IKPNSLSLTRSLCEFVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYH 115
IKP++ ++ + + AL++F+++ + + +N ++ ++++ ++ + +
Sbjct: 53 IKPDNFLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSREMYFDAFSLFL 112
Query: 116 R------MEYEGIGIDNFTFPFVIKACGRLLSFIEG---KKVHGKLIKIGLDRDIYVCNS 166
+ D+ + V+KA F G ++VHG +I+ G D D++V N
Sbjct: 113 SWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNG 172
Query: 167 LIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGE-KP 225
+I Y K +E A KVF+ M RD+VSWN M++GY G +K ML + KP
Sbjct: 173 MITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKP 232
Query: 226 DRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVF 285
+ +++IS C + G E+H ++I N +++D+ + ++I YAKCG +DYA +F
Sbjct: 233 NGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALF 292
Query: 286 NEMTCKNIV-------------------------------AWNAMIGGYAINGHFLESFT 314
+EM+ K+ V WNAMI G N H E
Sbjct: 293 DEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVIN 352
Query: 315 CLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYG 374
+ M P+ +T+ +LLPS + L GK IH +AIR ++ + T+++D Y
Sbjct: 353 SFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYA 412
Query: 375 KCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIAS 434
K G L A+ VF ++++++W AII AY +G ++ A LF ++ KPD VT+ +
Sbjct: 413 KLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTA 472
Query: 435 ILPAYAELATVSECKQI-HAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFK 493
+L A+A + I + +TK ++ +V + ++ G L A + M
Sbjct: 473 VLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKMPID 532
Query: 494 NLVS-WNTMIMAYAIHGFGTISIQLFSRMKQNGIEP-NESTFVSLLSSCSISGLVNEGWE 551
+ W ++ ++ G + I F+ + +EP N + + + + +G E
Sbjct: 533 PIAKVWGALLNGASV--LGDLEIARFACDRLFEMEPENTGNYTIMANLYTQAGRWEEAEM 590
Query: 552 LFNSMK 557
+ N MK
Sbjct: 591 VRNKMK 596
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 126/274 (45%), Gaps = 5/274 (1%)
Query: 55 MIKPNSLSLTRSLCEFVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFY 114
M + +S++ + ++ G + A+ LF +M WN +I G +EVI+ +
Sbjct: 295 MSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSF 354
Query: 115 HRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKF 174
M G + T ++ + + GK++H I+ G D +IYV S+ID Y K
Sbjct: 355 REMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKL 414
Query: 175 GFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSL 234
GF+ A++VF+ R L++W ++ Y V GD + F +M LG KPD +++ + L
Sbjct: 415 GFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVL 474
Query: 235 GGCSIGCCVRGGKEI-HCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNI 293
+ + I + + +E + ++ + ++ GK+ A ++M I
Sbjct: 475 SAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKMPIDPI 534
Query: 294 V-AWNAMIGGYAINGHF-LESFTC--LKRMQEDN 323
W A++ G ++ G + F C L M+ +N
Sbjct: 535 AKVWGALLNGASVLGDLEIARFACDRLFEMEPEN 568
>AT4G19220.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:10505266-10508121 REVERSE
Length = 932
Score = 313 bits (802), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 188/604 (31%), Positives = 312/604 (51%), Gaps = 39/604 (6%)
Query: 74 GAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRME-YEGIGIDNFTFPFV 132
G + A +FE++ D N I+ GF+ G+F+E ++M+ + I D T +
Sbjct: 340 GDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSI 399
Query: 133 IKACGRLLSFIEGKKVHGKLIKIGL-DRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRD 191
CG L EG+ VHG +++ + R + V NS+IDMY K G AE +F+ RD
Sbjct: 400 TSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRD 459
Query: 192 LVSWNCMVNGYRVIGDGLKSLMCFKEMLG--LGEKPDRLSMISSLGGCSIGCCVRGGKEI 249
LVSWN M++ + G K+ FKE++ K ++++ L C + GK +
Sbjct: 460 LVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSV 519
Query: 250 HCQVIRNG------LELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGY 303
HC + + G L L+ M +T +++ +WN++I G
Sbjct: 520 HCWLQKLGDLTSAFLRLETMSET------------------------RDLTSWNSVISGC 555
Query: 304 AINGHFLESFTCLKRM-QEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPH 362
A +GH LES + M +E + D IT++ + + G +L+G+C HG AI+ +
Sbjct: 556 ASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELD 615
Query: 363 LVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRN 422
L+ L+ MYG+C ++ A VFG I++ N+ SWN +I+A QN E +LF RN
Sbjct: 616 TQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLF---RN 672
Query: 423 QTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQT 482
L+P+ +T +L A +L + S Q H ++ + +N F S A+V MY+ CG L+T
Sbjct: 673 LKLEPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLET 732
Query: 483 ARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNG-IEPNESTFVSLLSSCS 541
+ F + ++ +WN++I A+ HG G +++LF + N +EPN+S+F+SLLS+CS
Sbjct: 733 GMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFISLLSACS 792
Query: 542 ISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIW 601
SG ++EG + M+ + + EH +VD+LGR G L A +FI + A +W
Sbjct: 793 HSGFIDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYEFITGIGEPQKAGVW 852
Query: 602 GSLLTASRNNNDIFFAEFAAKHILSHDNDNTGCYVLLANMYAEAGRWEDVEQIKLVMKKK 661
G+LL+A + D + A+ + + DN Y+ LAN Y G WE+ +++ +++
Sbjct: 853 GALLSACNYHGDTKLGKEVAEVLFEMEPDNASYYISLANTYVGLGGWEEAVRLRKMVEDN 912
Query: 662 GLAK 665
L K
Sbjct: 913 ALKK 916
Score = 217 bits (553), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 160/567 (28%), Positives = 285/567 (50%), Gaps = 32/567 (5%)
Query: 29 RDLLVNPRIRKSNPTKKQMS-ETPKRGMIKPNSLSLTRSLCEFVDSGAMDNALYLFEKMN 87
RD+L + +R T + + K G+++ + S ++ L + +G + ++ LF+++
Sbjct: 91 RDVLRSFMMRTETETPRSVHCFALKCGLLQDLATS-SKLLTFYGRTGELVSSSCLFDELK 149
Query: 88 QPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKK 147
+ D +WN +I + G + + + M ++G D+ T A L +
Sbjct: 150 EKDVIVWNSMITALNQNGRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSM 209
Query: 148 VHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGD 207
+H I+ GL D +CN+L+++Y K + AE VF M RD+VSWN ++ G
Sbjct: 210 LHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGH 269
Query: 208 GLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGL--ELDIMVQ 265
KSL FK M G G++ D ++ + CS + G+ +H VI++G E + V
Sbjct: 270 PRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVG 329
Query: 266 TSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQE-DNL 324
S+I MY+KCG + AE VF E+ C+++++ NA++ G+A NG F E+F L +MQ D +
Sbjct: 330 NSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKI 389
Query: 325 IPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLET--ALVDMYGKCGQLKFA 382
PD T++++ C EG+ +HGY +R M + LE +++DMYGKCG A
Sbjct: 390 QPDIATVVSITSICGDLSFSREGRAVHGYTVR-MEMQSRALEVINSVIDMYGKCGLTTQA 448
Query: 383 ECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQ--TLKPDAVTIASILPAYA 440
E +F +++VSWN++I+A+ QNG +A LF + ++ K T+ +IL +
Sbjct: 449 ELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCD 508
Query: 441 ELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMS-FKNLVSWN 499
++ K +H ++ KL GDL +A ++MS ++L SWN
Sbjct: 509 SSDSLIFGKSVHCWLQKL-------------------GDLTSAFLRLETMSETRDLTSWN 549
Query: 500 TMIMAYAIHGFGTISIQLFSRMKQNG-IEPNESTFVSLLSSCSISGLVNEGWELFNSMKM 558
++I A G S++ F M + G I + T + +S+ GLV +G F+ + +
Sbjct: 550 SVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQG-RCFHGLAI 608
Query: 559 DYNIDYGIEHYGCMVDLLGRTGNLDAA 585
+ + ++ + GR ++++A
Sbjct: 609 KSLRELDTQLQNTLITMYGRCKDIESA 635
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 126/246 (51%), Gaps = 1/246 (0%)
Query: 348 KCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQN 407
+ +H +A++ L L + L+ YG+ G+L + C+F + EK+++ WN++I A QN
Sbjct: 107 RSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQN 166
Query: 408 GRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTS 467
GR A+ LF + ++ + D+ T+ A + L +C +H + L ++
Sbjct: 167 GRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLC 226
Query: 468 NAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIE 527
NA++ +YAK +L +A F M +++VSWNT++ +G S+Q F M +G E
Sbjct: 227 NALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQE 286
Query: 528 PNESTFVSLLSSCSISGLVNEGWELFN-SMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAK 586
+ TF ++S+CS + G L +K Y+ + + ++ + + G+ +AA+
Sbjct: 287 ADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAE 346
Query: 587 QFIEEM 592
EE+
Sbjct: 347 TVFEEL 352
>AT1G71420.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:26917822-26920059 REVERSE
Length = 745
Score = 313 bits (801), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 206/695 (29%), Positives = 351/695 (50%), Gaps = 31/695 (4%)
Query: 128 TFPFVIKACGRLLSFIEGKKVHGKLIK--IGLDRDIYVCNSLIDMYFKFGFVEVAEKVFE 185
+ + +AC + ++G +H ++ +++ + N LI+MY K G + A +VF+
Sbjct: 61 AYAALFQACAEQRNLLDGINLHHHMLSHPYCYSQNVILANFLINMYAKCGNILYARQVFD 120
Query: 186 AMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRG 245
MP R++VSW ++ GY G+ + F ML P+ ++ S L C
Sbjct: 121 TMPERNVVSWTALITGYVQAGNEQEGFCLFSSMLSHC-FPNEFTLSSVLTSCR----YEP 175
Query: 246 GKEIHCQVIRNGLELDIMVQTSLIDMYAKC--GKVDY-AERVFNEMTCKNIVAWNAMIGG 302
GK++H ++ GL I V ++I MY +C G Y A VF + KN+V WN+MI
Sbjct: 176 GKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAA 235
Query: 303 YAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLE---GKC---IHGYAIR 356
+ ++ RM D + D T++N+ S K L+ KC +H ++
Sbjct: 236 FQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYKSSDLVPNEVSKCCLQLHSLTVK 295
Query: 357 KMFLPHLVLETALVDMYGKCGQLKFAEC--VFGRINE-KNMVSWNAIIAAYVQNGRNEEA 413
+ + TAL+ +Y + + + +C +F ++ +++V+WN II A+ E A
Sbjct: 296 SGLVTQTEVATALIKVYSEMLE-DYTDCYKLFMEMSHCRDIVAWNGIITAFAVYD-PERA 353
Query: 414 LELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYM 473
+ LF LR + L PD T +S+L A A L T IHA + K ++T +N++++
Sbjct: 354 IHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHA 413
Query: 474 YAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTF 533
YAKCG L R FD M +++VSWN+M+ AY++HG + +F +M I P+ +TF
Sbjct: 414 YAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKMD---INPDSATF 470
Query: 534 VSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMP 593
++LLS+CS +G V EG +F SM + HY C++D+L R A++ I++MP
Sbjct: 471 IALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEAEEVIKQMP 530
Query: 594 LVPTARIWGSLLTASRNNNDIFFAEFAAKHILSH-DNDNTGCYVLLANMYAEAGRWEDVE 652
+ P A +W +LL + R + + + AA + + N+ Y+ ++N+Y G + +
Sbjct: 531 MDPDAVVWIALLGSCRKHGNTRLGKLAADKLKELVEPTNSMSYIQMSNIYNAEGSFNEAN 590
Query: 653 QIKLVMKKKGLAKTVDCCTVESKGKSQKFINNNKSHQQAYMIYDVLDIILKKIGEDVYIH 712
M+ + K D E K +F + + +Y L ++ + E Y+
Sbjct: 591 LSIKEMETWRVRKEPDLSWTEIGNKVHEFASGGRHRPDKEAVYRELKRLISWLKEMGYVP 650
Query: 713 SL-SKFRPADVIKKKMKSPQNHSVKLAICFGLI----STAIGKPII-IRKNTRICKDCHI 766
+ S + + +++ + +HS KLA+ F ++ S+ G +I I KNTRIC DCH
Sbjct: 651 EMRSASQDIEDEEQEEDNLLHHSEKLALAFAVMEGRKSSDCGVNLIQIMKNTRICIDCHN 710
Query: 767 AAKKISRVTKREIIVGDSKIFHHFEDGRCSCGDYW 801
K S++ +EI++ DS FHHF+D CSC DYW
Sbjct: 711 FMKLASKLLGKEILMRDSNRFHHFKDSSCSCNDYW 745
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 164/351 (46%), Gaps = 22/351 (6%)
Query: 72 DSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPF 131
D A A +FE + + WN +I F L ++ I + RM +G+G D T
Sbjct: 207 DGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLN 266
Query: 132 VIKACGRLLSFIEGK------KVHGKLIKIGLDRDIYVCNSLIDMYFKF--GFVEVAEKV 183
+ + + + + ++H +K GL V +LI +Y + + + +
Sbjct: 267 ICSSLYKSSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLF 326
Query: 184 FEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCV 243
E RD+V+WN ++ + V D +++ F ++ PD + S L C+
Sbjct: 327 MEMSHCRDIVAWNGIITAFAVY-DPERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTA 385
Query: 244 RGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGY 303
R IH QVI+ G D ++ SLI YAKCG +D RVF++M +++V+WN+M+ Y
Sbjct: 386 RHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAY 445
Query: 304 AINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMF---- 359
+++G ++M ++ PD+ T I LL +CS G + EG I R MF
Sbjct: 446 SLHGQVDSILPVFQKM---DINPDSATFIALLSACSHAGRVEEGLRI----FRSMFEKPE 498
Query: 360 -LPHLVLETALVDMYGKCGQLKFAECVFGRIN-EKNMVSWNAIIAAYVQNG 408
LP L ++DM + + AE V ++ + + V W A++ + ++G
Sbjct: 499 TLPQLNHYACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHG 549
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 115/246 (46%), Gaps = 12/246 (4%)
Query: 82 LFEKMNQ-PDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLL 140
LF +M+ D WN II F+ + I + ++ E + D +TF V+KAC L+
Sbjct: 325 LFMEMSHCRDIVAWNGIITAFAVYDP-ERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLV 383
Query: 141 SFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVN 200
+ +H ++IK G D + NSLI Y K G +++ +VF+ M RD+VSWN M+
Sbjct: 384 TARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLK 443
Query: 201 GYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLEL 260
Y + G L F++M PD + I+ L CS V G I + L
Sbjct: 444 AYSLHGQVDSILPVFQKM---DINPDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETL 500
Query: 261 DIMVQTS-LIDMYAKCGKVDYAERVFNEMTC-KNIVAWNAMIGGYAINGHFLESFTCLKR 318
+ + +IDM ++ + AE V +M + V W A++G +G+ T L +
Sbjct: 501 PQLNHYACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHGN-----TRLGK 555
Query: 319 MQEDNL 324
+ D L
Sbjct: 556 LAADKL 561
>AT4G15720.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:8949569-8951419 FORWARD
Length = 616
Score = 312 bits (800), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 187/567 (32%), Positives = 295/567 (52%), Gaps = 15/567 (2%)
Query: 249 IHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGH 308
+H ++ G D L+ Y K +++ A ++F+EM N+V+W ++I GY G
Sbjct: 51 LHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGK 110
Query: 309 FLESFTCLKRMQEDNLIP-DAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLET 367
+ + ++M ED +P + T ++ +CS GK IH ++V+ +
Sbjct: 111 PQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSS 170
Query: 368 ALVDMYGKCGQLKFAECVFGRI--NEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTL 425
+LVDMYGKC ++ A VF + +N+VSW ++I AY QN R EA+ELF N L
Sbjct: 171 SLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSF-NAAL 229
Query: 426 KPDAVT---IASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQT 482
D +AS++ A + L + K H +T+ SNT + +++ MYAKCG L
Sbjct: 230 TSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSC 289
Query: 483 ARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSI 542
A + F + +++S+ +MIMA A HG G +++LF M I PN T + +L +CS
Sbjct: 290 AEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSH 349
Query: 543 SGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIE--EMPLVPTARI 600
SGLVNEG E + M Y + HY C+VD+LGR G +D A + + E+ A +
Sbjct: 350 SGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALL 409
Query: 601 WGSLLTASRNNNDIFFAEFAAKHILSHDNDNTGCYVLLANMYAEAGRWEDVEQIKLVMKK 660
WG+LL+A R + + A+K ++ + T Y+ L+N YA +G WED E ++L MK+
Sbjct: 410 WGALLSAGRLHGRVEIVSEASKRLIQSNQQVTSAYIALSNAYAVSGGWEDSESLRLEMKR 469
Query: 661 KGLAKTVDCCTVESKGKSQKFINNNKSHQQAYMIYDVLDIILKKIGEDVYIHSLSKFRPA 720
G K C +E+K F + S ++ I L + K++ E + S S +
Sbjct: 470 SGNVKERACSWIENKDSVYVFHAGDLSCDESGEIERFLKDLEKRMKERGHRGSSSMITTS 529
Query: 721 DVI------KKKMKSPQNHSVKLAICFGLISTAIGKPIIIRKNTRICKDCHIAAKKISRV 774
+ + K + H +LA+ +GL+ G I I N R+C+DCH A K IS +
Sbjct: 530 SSVFVDVDEEAKDEMVSLHCERLALAYGLLHLPAGSTIRIMNNLRMCRDCHEAFKLISEI 589
Query: 775 TKREIIVGDSKIFHHFEDGRCSCGDYW 801
+REI+V D FH F++G C+C DYW
Sbjct: 590 VEREIVVRDVNRFHCFKNGSCTCRDYW 616
Score = 172 bits (437), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 120/437 (27%), Positives = 215/437 (49%), Gaps = 22/437 (5%)
Query: 148 VHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGD 207
+H +K+G D + N L+ Y K + A K+F+ M ++VSW +++GY +G
Sbjct: 51 LHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGK 110
Query: 208 GLKSLMCFKEML-GLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQT 266
+L F++M P+ + S CS R GK IH ++ +GL +I+V +
Sbjct: 111 PQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSS 170
Query: 267 SLIDMYAKCGKVDYAERVFNEMT--CKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNL 324
SL+DMY KC V+ A RVF+ M +N+V+W +MI YA N E+ L R L
Sbjct: 171 SLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIE-LFRSFNAAL 229
Query: 325 IPD---AITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKF 381
D + +++ +CS G L GK HG R + + V+ T+L+DMY KCG L
Sbjct: 230 TSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSC 289
Query: 382 AECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAE 441
AE +F RI +++S+ ++I A ++G E A++LF + + P+ VT+ +L A +
Sbjct: 290 AEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSH 349
Query: 442 LATVSE-CKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSF---KNLVS 497
V+E + + K + ++ +V M + G + A ++ + +
Sbjct: 350 SGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALL 409
Query: 498 WNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNE---STFVSLLSSCSISGLVNEGWELFN 554
W ++ A +HG +++ S + I+ N+ S +++L ++ ++SG GWE
Sbjct: 410 WGALLSAGRLHG----RVEIVSEASKRLIQSNQQVTSAYIALSNAYAVSG----GWEDSE 461
Query: 555 SMKMDYNIDYGIEHYGC 571
S++++ ++ C
Sbjct: 462 SLRLEMKRSGNVKERAC 478
Score = 159 bits (403), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 104/363 (28%), Positives = 187/363 (51%), Gaps = 9/363 (2%)
Query: 58 PNSLSLTRSLCEFVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRM 117
++ ++ + +V ++ A LF++M +P+ W +I G+++ G Q + + +M
Sbjct: 62 SDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKM 121
Query: 118 -EYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGF 176
E + + +TF V KAC L GK +H +L GL R+I V +SL+DMY K
Sbjct: 122 HEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCND 181
Query: 177 VEVAEKVFEAMPL--RDLVSWNCMVNGYRVIGDGLKSLMCFKEMLG--LGEKPDRLSMIS 232
VE A +VF++M R++VSW M+ Y G +++ F+ ++ ++ + S
Sbjct: 182 VETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLAS 241
Query: 233 SLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKN 292
+ CS ++ GK H V R G E + +V TSL+DMYAKCG + AE++F + C +
Sbjct: 242 VISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHS 301
Query: 293 IVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEG-KCIH 351
++++ +MI A +G + M + P+ +T++ +L +CS G + EG + +
Sbjct: 302 VISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLS 361
Query: 352 GYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRIN---EKNMVSWNAIIAAYVQNG 408
A + +P T +VDM G+ G++ A + I E+ + W A+++A +G
Sbjct: 362 LMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGALLSAGRLHG 421
Query: 409 RNE 411
R E
Sbjct: 422 RVE 424
>AT4G31070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:15118696-15120537 REVERSE
Length = 613
Score = 312 bits (799), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 185/578 (32%), Positives = 317/578 (54%), Gaps = 15/578 (2%)
Query: 98 IRGFSNKGLFQEVIDFYHRMEYEGIGIDNFT--FPFVIKACG-RLLSFIEGKKVHGKLIK 154
++G + + E + Y +++ +G + FT P VIKAC + F+ G ++H +K
Sbjct: 17 LKGLVSDQFYDEALRLY-KLKIHSLGTNGFTAILPSVIKACAFQQEPFLLGAQLHCLCLK 75
Query: 155 IGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGL--KSL 212
G D D V NSLI MY KF KVF+ M RD VS+ ++N DGL +++
Sbjct: 76 AGADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINS--CCQDGLLYEAM 133
Query: 213 MCFKEMLGLGEKPDRLSMISSLGGCS-IGCCVRGGKEIHCQV-IRNGLELDIMVQTSLID 270
KEM G P + S L C+ +G + + H V + ++ +++ T+L+D
Sbjct: 134 KLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVD 193
Query: 271 MYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAIT 330
MY K A VF++M KN V+W AMI G N ++ + MQ +NL P+ +T
Sbjct: 194 MYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVT 253
Query: 331 MINLLPSCSK--FGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGR 388
++++LP+C + +G+ L K IHG++ R L A + MY +CG + + +F
Sbjct: 254 LLSVLPACVELNYGSSLV-KEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFET 312
Query: 389 INEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSEC 448
+++V W+++I+ Y + G E + L + +R + ++ ++VT+ +I+ A +S
Sbjct: 313 SKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFA 372
Query: 449 KQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIH 508
+H+ I K S+ NA++ MYAKCG L AR F ++ K+LVSW++MI AY +H
Sbjct: 373 STVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLH 432
Query: 509 GFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEH 568
G G+ ++++F M + G E ++ F+++LS+C+ +GLV E +F Y++ +EH
Sbjct: 433 GHGSEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIFTQAG-KYHMPVTLEH 491
Query: 569 YGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTASRNNNDIFFA-EFAAKHILSH 627
Y C ++LLGR G +D A + MP+ P+ARIW SLL+A + + A + A ++
Sbjct: 492 YACYINLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACETHGRLDVAGKIIANELMKS 551
Query: 628 DNDNTGCYVLLANMYAEAGRWEDVEQIKLVMKKKGLAK 665
+ DN YVLL+ ++ E+G + E+++ VM+++ L K
Sbjct: 552 EPDNPANYVLLSKIHTESGNYHAAEEVRRVMQRRKLNK 589
Score = 109 bits (273), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 117/231 (50%), Gaps = 5/231 (2%)
Query: 82 LFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKAC--GRL 139
LFE D +W+ +I G++ G EV++ ++M EGI ++ T ++ AC L
Sbjct: 309 LFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTL 368
Query: 140 LSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMV 199
LSF VH +++K G I + N+LIDMY K G + A +VF + +DLVSW+ M+
Sbjct: 369 LSF--ASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMI 426
Query: 200 NGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLE 259
N Y + G G ++L FK M+ G + D ++ ++ L C+ V + I Q + +
Sbjct: 427 NAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIFTQAGKYHMP 486
Query: 260 LDIMVQTSLIDMYAKCGKVDYAERVFNEMTCK-NIVAWNAMIGGYAINGHF 309
+ + I++ + GK+D A V M K + W++++ +G
Sbjct: 487 VTLEHYACYINLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACETHGRL 537
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-449838 REVERSE
Length = 500
Score = 307 bits (787), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 181/535 (33%), Positives = 276/535 (51%), Gaps = 39/535 (7%)
Query: 271 MYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAIT 330
MY K G + YA VF+ M KNIVAWN+++ G + ++ + RM+++ + PDAIT
Sbjct: 1 MYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAIT 60
Query: 331 MINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRIN 390
+L Y G+ + A V G++
Sbjct: 61 W-----------------------------------NSLASGYATLGKPEKALDVIGKMK 85
Query: 391 EK----NMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVS 446
EK N+VSW AI + +NG AL++F ++ + + P+A T++++L L+ +
Sbjct: 86 EKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLH 145
Query: 447 ECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYA 506
K++H + + L + + + A+V MY K GDLQ+A F + K+L SWN M+M YA
Sbjct: 146 SGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYA 205
Query: 507 IHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGI 566
+ G G I FS M + G+EP+ TF S+LS C SGLV EGW+ F+ M+ Y I I
Sbjct: 206 MFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTI 265
Query: 567 EHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTASRNNNDIFFAEFAAKHILS 626
EH CMVDLLGR+G LD A FI+ M L P A IWG+ L++ + + D+ AE A K +
Sbjct: 266 EHCSCMVDLLGRSGYLDEAWDFIQTMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQV 325
Query: 627 HDNDNTGCYVLLANMYAEAGRWEDVEQIKLVMKKKGLAKTVDCCTVESKGKSQKFINNNK 686
+ N+ Y+++ N+Y+ RWEDVE+I+ +M+ + ++ F K
Sbjct: 326 LEPHNSANYMMMINLYSNLNRWEDVERIRNLMRNNRVRVQDLWSWIQIDQTVHIFYAEGK 385
Query: 687 SHQQAYMIYDVLDIILKKIGEDVYIHSLSKFRPADVIKKKMKSPQNHSVKLAICFGLIST 746
+H IY L ++ ++ + Y+ S +K K H+ KLA+ +GLI
Sbjct: 386 THPDEGDIYFELYKLVSEMKKSGYVPDTSCIHQDISDSEKEKLLMGHTEKLAMTYGLIKK 445
Query: 747 AIGKPIIIRKNTRICKDCHIAAKKISRVTKREIIVGDSKIFHHFEDGRCSCGDYW 801
PI + KNT IC D H AK +S + REI++ + HHF DG+CSC D W
Sbjct: 446 KGLAPIRVVKNTNICSDSHTVAKYMSVLRNREIVLQEGARVHHFRDGKCSCNDSW 500
Score = 139 bits (349), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 98/369 (26%), Positives = 165/369 (44%), Gaps = 43/369 (11%)
Query: 170 MYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLS 229
MY K G++ A VF+ M +++V+WN +V+G
Sbjct: 1 MYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGL--------------------------- 33
Query: 230 MISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMT 289
S C ++ + + ++ + G++ D + SL YA GK + A V +M
Sbjct: 34 --------SYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMK 85
Query: 290 CK----NIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLL 345
K N+V+W A+ G + NG+F + +MQE+ + P+A TM LL L
Sbjct: 86 EKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLH 145
Query: 346 EGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYV 405
GK +HG+ +RK + + TALVDMYGK G L+ A +F I K++ SWN ++ Y
Sbjct: 146 SGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYA 205
Query: 406 QNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSE-CKQIHAYITKLELSSNT 464
GR EE + F + ++PDA+T S+L V E K ++ +
Sbjct: 206 MFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTI 265
Query: 465 FTSNAIVYMYAKCGDLQTARRYFDSMSFK-NLVSWNTMIMAYAIHGFGTISIQLFSRMKQ 523
+ +V + + G L A + +MS K + W + + IH ++ + R++
Sbjct: 266 EHCSCMVDLLGRSGYLDEAWDFIQTMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQV 325
Query: 524 NGIEPNEST 532
+EP+ S
Sbjct: 326 --LEPHNSA 332
Score = 116 bits (290), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 139/294 (47%), Gaps = 8/294 (2%)
Query: 56 IKPNSLSLTRSLCEFVDSGAMDNALYLFEKMNQ----PDTYIWNVIIRGFSNKGLFQEVI 111
IKP++++ + G + AL + KM + P+ W I G S G F+ +
Sbjct: 54 IKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNAL 113
Query: 112 DFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMY 171
+ +M+ EG+G + T ++K G L GK+VHG ++ L D YV +L+DMY
Sbjct: 114 KVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMY 173
Query: 172 FKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMI 231
K G ++ A ++F + + L SWNCM+ GY + G G + + F ML G +PD ++
Sbjct: 174 GKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFT 233
Query: 232 SSLGGC-SIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTC 290
S L C + G G K R G+ I + ++D+ + G +D A M+
Sbjct: 234 SVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSL 293
Query: 291 K-NIVAWNAMIGGYAINGHFLESFTCLKRMQ--EDNLIPDAITMINLLPSCSKF 341
K + W A + I+ + KR+Q E + + + MINL + +++
Sbjct: 294 KPDATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANYMMMINLYSNLNRW 347
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 95/365 (26%), Positives = 150/365 (41%), Gaps = 45/365 (12%)
Query: 70 FVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTF 129
++ +G + A +F+ M+ + WN ++ G S L ++ RME EGI D T+
Sbjct: 2 YIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITW 61
Query: 130 PFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPL 189
NSL Y G E A V M
Sbjct: 62 -----------------------------------NSLASGYATLGKPEKALDVIGKMKE 86
Query: 190 R----DLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRG 245
+ ++VSW + +G G+ +L F +M G P+ +M + L +
Sbjct: 87 KGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHS 146
Query: 246 GKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAI 305
GKE+H +R L D V T+L+DMY K G + A +F + K++ +WN M+ GYA+
Sbjct: 147 GKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAM 206
Query: 306 NGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEG-KCIHGYAIRKMFLPHLV 364
G E M E + PDAIT ++L C G + EG K R +P +
Sbjct: 207 FGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIE 266
Query: 365 LETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCL--RN 422
+ +VD+ G+ G L A + I ++ I A++ + + LEL R
Sbjct: 267 HCSCMVDLLGRSGYLDEA---WDFIQTMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRL 323
Query: 423 QTLKP 427
Q L+P
Sbjct: 324 QVLEP 328
>AT5G15340.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:4982273-4984144 REVERSE
Length = 623
Score = 307 bits (787), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 183/614 (29%), Positives = 315/614 (51%), Gaps = 55/614 (8%)
Query: 237 CSIGCCVRGGKEIHCQVIRNGLE--LDIMVQTSLIDMYAKCGKVDYAERVFNE--MTCKN 292
C+ +R GKE+H + +GL+ + +L YA G++ A+++F+E ++ K+
Sbjct: 16 CAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPLSEKD 75
Query: 293 IVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHG 352
V W ++ ++ G + S M+ + D ++++ L C+K L + HG
Sbjct: 76 NVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHG 135
Query: 353 YAIRKMFLPHLVLETALVDMYGKCG-------------------------------QLKF 381
A++ L + + AL+DMYGKCG L+
Sbjct: 136 VAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLER 195
Query: 382 AECVFGRINEKNMVSWNAIIAAYVQNGRNEEALEL-----FHCLRNQTLKPDAVTIASIL 436
VF + E+N V+W ++A Y+ G E LEL F C VT+ S+L
Sbjct: 196 GREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNF----VTLCSML 251
Query: 437 PAYAELATVSECKQIHAYITKLELS-------SNTFTSNAIVYMYAKCGDLQTARRYFDS 489
A A+ + + +H Y K E+ + A+V MYAKCG++ ++ F
Sbjct: 252 SACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRL 311
Query: 490 MSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEG 549
M +N+V+WN + A+HG G + I +F +M + ++P++ TF ++LS+CS SG+V+EG
Sbjct: 312 MRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIRE-VKPDDLTFTAVLSACSHSGIVDEG 370
Query: 550 WELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTASR 609
W F+S++ Y ++ ++HY CMVDLLGR G ++ A+ + EMP+ P + GSLL +
Sbjct: 371 WRCFHSLRF-YGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSCS 429
Query: 610 NNNDIFFAEFAAKHILSHDNDNTGCYVLLANMYAEAGRWEDVEQIKLVMKKKGLAKTVDC 669
+ + AE + ++ NT +L++NMY GR + + ++ ++K+G+ K
Sbjct: 430 VHGKVEIAERIKRELIQMSPGNTEYQILMSNMYVAEGRSDIADGLRGSLRKRGIRKIPGL 489
Query: 670 CTVESKGKSQKFINNNKSHQQAYMIYDVLDIILKKIGEDVYIHSLSKF--RPADVIKKKM 727
++ +F + ++SH + IY L+ ++++I Y+ +S +++K
Sbjct: 490 SSIYVNDSVHRFSSGDRSHPRTKEIYLKLNEVIERIRSAGYVPDVSGLVSHSEGDLEEKE 549
Query: 728 KSPQNHSVKLAICFGLISTAIGKPIIIRKNTRICKDCHIAAKKISRVTKREIIVGDSKIF 787
++ HS KLA+CFGL+ T P+++ KN RIC+DCH A K +S+V REII+ D F
Sbjct: 550 QALCCHSEKLAVCFGLLETKPSTPLLVFKNLRICRDCHSAMKIVSKVYDREIIIRDRNRF 609
Query: 788 HHFEDGRCSCGDYW 801
H F+ G CSC DYW
Sbjct: 610 HQFKGGSCSCSDYW 623
Score = 137 bits (345), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 105/386 (27%), Positives = 176/386 (45%), Gaps = 45/386 (11%)
Query: 41 NPTKKQMSETPKRGMIKPNSLSLTRSLCEF-VDSGAMDNALYLFEK--MNQPDTYIWNVI 97
P K+ + G+ K L+ +L +F SG M A LF++ +++ D W +
Sbjct: 23 RPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPLSEKDNVDWTTL 82
Query: 98 IRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGL 157
+ FS GL + + M + + ID+ + + C +L ++ HG +K+G+
Sbjct: 83 LSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKMGV 142
Query: 158 DRDIYVCNSLIDMYFKFGFV--------EVAEK-----------------------VFEA 186
+ VCN+L+DMY K G V E+ EK VF
Sbjct: 143 LTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHE 202
Query: 187 MPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEML-GLGEKPDRLSMISSLGGCSIGCCVRG 245
MP R+ V+W MV GY G + L EM+ G + +++ S L C+ +
Sbjct: 203 MPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVV 262
Query: 246 GKEIHCQVIRNGLEL-------DIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNA 298
G+ +H ++ + + D+MV T+L+DMYAKCG +D + VF M +N+V WNA
Sbjct: 263 GRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNVVTWNA 322
Query: 299 MIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEG-KCIHGYAIRK 357
+ G A++G +M + + PD +T +L +CS G + EG +C H
Sbjct: 323 LFSGLAMHGKGRMVIDMFPQMIRE-VKPDDLTFTAVLSACSHSGIVDEGWRCFHSLRFYG 381
Query: 358 MFLPHLVLETALVDMYGKCGQLKFAE 383
+ P + +VD+ G+ G ++ AE
Sbjct: 382 LE-PKVDHYACMVDLLGRAGLIEEAE 406
>AT5G55740.1 | Symbols: CRR21 | CRR21 (chlororespiratory reduction
21) | chr5:22561941-22564433 REVERSE
Length = 830
Score = 305 bits (782), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 189/640 (29%), Positives = 336/640 (52%), Gaps = 42/640 (6%)
Query: 74 GAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVI 133
G +D+A +F+++ + WN ++ G+ G +E I + M +G+ T +
Sbjct: 222 GVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCL 281
Query: 134 KACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLV 193
A + EGK+ H I G++ D + SL++ Y K G +E AE VF+ M +D+V
Sbjct: 282 SASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVV 341
Query: 194 SWNCMVNGYRVIGDGLKS---LMCFKEMLGLGE-KPDRLSMISSLGGCSIGCCVRGGKEI 249
+WN +++GY + GL MC +++ L + K D +++ + + + ++ GKE+
Sbjct: 342 TWNLIISGY--VQQGLVEDAIYMC--QLMRLEKLKYDCVTLATLMSAAARTENLKLGKEV 397
Query: 250 HCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHF 309
C IR+ E DI++ ++++DMYAKCG + A++VF+ K+++ WN ++ YA +G
Sbjct: 398 QCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLS 457
Query: 310 LESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETAL 369
E+ MQ + + P+ IT ++ S + G + E K MFL
Sbjct: 458 GEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAK--------DMFL--------- 500
Query: 370 VDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDA 429
Q++ + + N++SW ++ VQNG +EEA+ ++ L+P+A
Sbjct: 501 --------QMQSSGII------PNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNA 546
Query: 430 VTIASILPAYAELATVSECKQIHAYITK-LELSSNTFTSNAIVYMYAKCGDLQTARRYFD 488
+I L A A LA++ + IH YI + L+ SS ++V MYAKCGD+ A + F
Sbjct: 547 FSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFG 606
Query: 489 SMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNE 548
S + L N MI AYA++G +I L+ ++ G++P+ T ++LS+C+ +G +N+
Sbjct: 607 SKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQ 666
Query: 549 GWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTAS 608
E+F + ++ +EHYG MVDLL G + A + IEEMP P AR+ SL+ +
Sbjct: 667 AIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMPFKPDARMIQSLVASC 726
Query: 609 RNNNDIFFAEFAAKHILSHDNDNTGCYVLLANMYAEAGRWEDVEQIKLVMKKKGLAKTVD 668
++ ++ +L + +N+G YV ++N YA G W++V +++ +MK KGL K
Sbjct: 727 NKQRKTELVDYLSRKLLESEPENSGNYVTISNAYAVEGSWDEVVKMREMMKAKGLKKKPG 786
Query: 669 CCTVESKGKS--QKFINNNKSHQQAYMIYDVLDIILKKIG 706
C ++ G+ F+ N+K+H + I +L ++L +G
Sbjct: 787 CSWIQITGEEGVHVFVANDKTHTRINEIQMMLALLLYDMG 826
Score = 247 bits (631), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 146/476 (30%), Positives = 253/476 (53%), Gaps = 2/476 (0%)
Query: 84 EKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFI 143
E+ + P + + + G +E + M++ + I + +++ C
Sbjct: 28 EQAHSPSSTSYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLS 87
Query: 144 EGKKVHGKLIKIG--LDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNG 201
GK++H +++K G R+ Y+ L+ Y K +E+AE +F + +R++ SW ++
Sbjct: 88 TGKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGV 147
Query: 202 YRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELD 261
IG +LM F EML PD + + C R G+ +H V+++GLE
Sbjct: 148 KCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDC 207
Query: 262 IMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQE 321
+ V +SL DMY KCG +D A +VF+E+ +N VAWNA++ GY NG E+ M++
Sbjct: 208 VFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRK 267
Query: 322 DNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKF 381
+ P +T+ L + + G + EGK H AI +L T+L++ Y K G +++
Sbjct: 268 QGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEY 327
Query: 382 AECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAE 441
AE VF R+ EK++V+WN II+ YVQ G E+A+ + +R + LK D VT+A+++ A A
Sbjct: 328 AEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAAR 387
Query: 442 LATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTM 501
+ K++ Y + S+ ++ ++ MYAKCG + A++ FDS K+L+ WNT+
Sbjct: 388 TENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTL 447
Query: 502 IMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMK 557
+ AYA G +++LF M+ G+ PN T+ ++ S +G V+E ++F M+
Sbjct: 448 LAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQ 503
Score = 235 bits (600), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 153/529 (28%), Positives = 260/529 (49%), Gaps = 44/529 (8%)
Query: 75 AMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIK 134
A++ A LF K+ + + W II GL + + + M I DNF P V K
Sbjct: 122 ALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCK 181
Query: 135 ACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVS 194
ACG L G+ VHG ++K GL+ ++V +SL DMY K G ++ A KVF+ +P R+ V+
Sbjct: 182 ACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVA 241
Query: 195 WNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVI 254
WN ++ GY G +++ F +M G +P R+++ + L + V GK+ H I
Sbjct: 242 WNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAI 301
Query: 255 RNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFT 314
NG+ELD ++ TSL++ Y K G ++YAE VF+ M K++V WN +I GY G ++
Sbjct: 302 VNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIY 361
Query: 315 CLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYG 374
+ M+ + L D +T+ L+ + ++ L GK + Y IR F +VL + ++DMY
Sbjct: 362 MCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYA 421
Query: 375 KCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIAS 434
KCG + A+ VF EK+++ WN ++AAY ++G + EAL LF+ ++ + + P
Sbjct: 422 KCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPP------- 474
Query: 435 ILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMS--- 491
N T N I+ + G + A+ F M
Sbjct: 475 ----------------------------NVITWNLIILSLLRNGQVDEAKDMFLQMQSSG 506
Query: 492 -FKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGW 550
NL+SW TM+ +G +I +M+++G+ PN + LS+C+ ++ G
Sbjct: 507 IIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGR 566
Query: 551 ELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAK-----QFIEEMPL 594
+ + + + +VD+ + G+++ A+ + E+PL
Sbjct: 567 TIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPL 615
Score = 122 bits (306), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 133/278 (47%), Gaps = 7/278 (2%)
Query: 306 NGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRK--MFLPHL 363
NG E+ + + M NL +L C L GK IH ++ + +
Sbjct: 48 NGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARILKNGDFYARNE 107
Query: 364 VLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQ 423
+ET LV Y KC L+ AE +F ++ +N+ SW AII + G E AL F +
Sbjct: 108 YIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLEN 167
Query: 424 TLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTA 483
+ PD + ++ A L + +H Y+ K L F ++++ MY KCG L A
Sbjct: 168 EIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDA 227
Query: 484 RRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSIS 543
+ FD + +N V+WN +++ Y +G +I+LFS M++ G+EP T + LS+ +
Sbjct: 228 SKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANM 287
Query: 544 GLVNEGWE-----LFNSMKMDYNIDYGIEHYGCMVDLL 576
G V EG + + N M++D + + ++ C V L+
Sbjct: 288 GGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLI 325
>AT2G04860.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:1706787-1708535 REVERSE
Length = 582
Score = 302 bits (773), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 176/578 (30%), Positives = 300/578 (51%), Gaps = 7/578 (1%)
Query: 86 MNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEG 145
M + DT +WN +I G+S G + + M +G T ++ CG+ +G
Sbjct: 1 MPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQG 60
Query: 146 KKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVI 205
+ VHG K GL+ D V N+LI Y K + AE +F M + VSWN M+ Y
Sbjct: 61 RSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQS 120
Query: 206 GDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQ 265
G +++ FK M EK +S ++ + S + +HC V++ G+ DI V
Sbjct: 121 GLQEEAITVFKNMF---EKNVEISPVTIINLLSAHV---SHEPLHCLVVKCGMVNDISVV 174
Query: 266 TSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLI 325
TSL+ Y++CG + AER++ +IV +++ YA G + + ++ +
Sbjct: 175 TSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMK 234
Query: 326 PDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECV 385
DA+ ++ +L C K + G +HGYAI+ ++ L+ MY K ++ +
Sbjct: 235 IDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFL 294
Query: 386 FGRINEKNMVSWNAIIAAYVQNGRNEEALELFH-CLRNQTLKPDAVTIASILPAYAELAT 444
F ++ E ++SWN++I+ VQ+GR A E+FH + L PDA+TIAS+L ++L
Sbjct: 295 FEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCC 354
Query: 445 VSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMA 504
++ K++H Y + + F A++ MYAKCG+ A F S+ +WN+MI
Sbjct: 355 LNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISG 414
Query: 505 YAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDY 564
Y++ G ++ + M++ G++P+E TF+ +LS+C+ G V+EG F +M ++ I
Sbjct: 415 YSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGISP 474
Query: 565 GIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTASRNNNDIFFAEFAAKHI 624
++HY MV LLGR A I +M + P + +WG+LL+A + ++ E+ A+ +
Sbjct: 475 TLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALLSACIIHRELEVGEYVARKM 534
Query: 625 LSHDNDNTGCYVLLANMYAEAGRWEDVEQIKLVMKKKG 662
D N G YVL++N+YA W+DV +++ +MK G
Sbjct: 535 FMLDYKNGGLYVLMSNLYATEAMWDDVVRVRNMMKDNG 572
Score = 154 bits (390), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 109/356 (30%), Positives = 171/356 (48%), Gaps = 6/356 (1%)
Query: 52 KRGMIKPNSLSLTRSL-CEFVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEV 110
K GM+ N +S+ SL C + G + +A L+ Q I+ ++ KG
Sbjct: 164 KCGMV--NDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIA 221
Query: 111 IDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDM 170
+ ++ + + ID ++ C + G +HG IK GL V N LI M
Sbjct: 222 VVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITM 281
Query: 171 YFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKE-MLGLGEKPDRLS 229
Y KF VE +FE + L+SWN +++G G + F + ML G PD ++
Sbjct: 282 YSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAIT 341
Query: 230 MISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMT 289
+ S L GCS CC+ GKE+H +RN E + V T+LIDMYAKCG AE VF +
Sbjct: 342 IASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIK 401
Query: 290 CKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKC 349
WN+MI GY+++G + +C M+E L PD IT + +L +C+ G + EGK
Sbjct: 402 APCTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKI 461
Query: 350 IHGYAIRKMFL-PHLVLETALVDMYGKCGQLKFAECVFGRINEK-NMVSWNAIIAA 403
I++ + P L +V + G+ A + +++ K + W A+++A
Sbjct: 462 CFRAMIKEFGISPTLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALLSA 517
>AT1G56570.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:21195804-21197721 FORWARD
Length = 611
Score = 301 bits (771), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 165/560 (29%), Positives = 305/560 (54%), Gaps = 8/560 (1%)
Query: 163 VCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLG 222
+ +LI YF+ G VE A +F+ MP RD+V+W M+ GY ++ CF EM+ G
Sbjct: 47 LATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQG 106
Query: 223 EKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCG-KVDYA 281
P+ ++ S L C + G +H V++ G+E + V ++++MYA C ++ A
Sbjct: 107 TSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAA 166
Query: 282 ERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDN--LIPDAITMINLLPSCS 339
+F ++ KN V W +I G+ G + K+M +N + P IT+ + + +
Sbjct: 167 CLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIA--VRASA 224
Query: 340 KFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNA 399
++ GK IH I++ F +L + +++D+Y +CG L A+ F + +K++++WN
Sbjct: 225 SIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNT 284
Query: 400 IIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLE 459
+I+ ++ + EAL +F +Q P+ T S++ A A +A ++ +Q+H I +
Sbjct: 285 LISE-LERSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRG 343
Query: 460 LSSNTFTSNAIVYMYAKCGDLQTARRYF-DSMSFKNLVSWNTMIMAYAIHGFGTISIQLF 518
+ N +NA++ MYAKCG++ ++R F + + +NLVSW +M++ Y HG+G +++LF
Sbjct: 344 FNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELF 403
Query: 519 SRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGR 578
+M +GI P+ F+++LS+C +GLV +G + FN M+ +Y I+ + Y C+VDLLGR
Sbjct: 404 DKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGR 463
Query: 579 TGNLDAAKQFIEEMPLVPTARIWGSLLTASR-NNNDIFFAEFAAKHILSHDNDNTGCYVL 637
G + A + +E MP P WG++L A + + ++ + AA+ ++ G YV+
Sbjct: 464 AGKIGEAYELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVMELKPKMVGTYVM 523
Query: 638 LANMYAEAGRWEDVEQIKLVMKKKGLAKTVDCCTVESKGKSQKFINNNKSHQQAYMIYDV 697
L+ +YA G+W D +++ +M+ G K + + + F ++K A +Y V
Sbjct: 524 LSYIYAAEGKWVDFARVRKMMRMMGNKKEAGMSWILVENQVFSFAVSDKMCPNASSVYSV 583
Query: 698 LDIILKKIGEDVYIHSLSKF 717
L +++++ E Y+ L
Sbjct: 584 LGLLIEETREAGYVPELDSL 603
Score = 209 bits (533), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 125/493 (25%), Positives = 245/493 (49%), Gaps = 6/493 (1%)
Query: 32 LVNPRIRKSNPTKKQMSETPKRGMIKPNSLSLTRSLCEFVDSGAMDNALYLFEKMNQPDT 91
V +R + Q +E P K + L+ T + + + G ++ A LF++M D
Sbjct: 18 FVRSSLRNAGVESSQNTEYPPYKPKKHHILA-TNLIVSYFEKGLVEEARSLFDEMPDRDV 76
Query: 92 YIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGK 151
W +I G+++ + +H M +G + FT V+K+C + G VHG
Sbjct: 77 VAWTAMITGYASSNYNARAWECFHEMVKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGV 136
Query: 152 LIKIGLDRDIYVCNSLIDMYFKFGF-VEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLK 210
++K+G++ +YV N++++MY +E A +F + +++ V+W ++ G+ +GDG+
Sbjct: 137 VVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIG 196
Query: 211 SLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLID 270
L +K+ML + + ++ + V GK+IH VI+ G + ++ V S++D
Sbjct: 197 GLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILD 256
Query: 271 MYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAIT 330
+Y +CG + A+ F+EM K+++ WN +I E+ +R + +P+ T
Sbjct: 257 LYCRCGYLSEAKHYFHEMEDKDLITWNTLISELE-RSDSSEALLMFQRFESQGFVPNCYT 315
Query: 331 MINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRI- 389
+L+ +C+ L G+ +HG R+ F ++ L AL+DMY KCG + ++ VFG I
Sbjct: 316 FTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIV 375
Query: 390 NEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSE-C 448
+ +N+VSW +++ Y +G EA+ELF + + ++PD + ++L A V +
Sbjct: 376 DRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGL 435
Query: 449 KQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFK-NLVSWNTMIMAYAI 507
K + ++ ++ + N +V + + G + A + M FK + +W ++ A
Sbjct: 436 KYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAILGACKA 495
Query: 508 HGFGTISIQLFSR 520
H + +L +R
Sbjct: 496 HKHNGLISRLAAR 508
Score = 160 bits (404), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 99/346 (28%), Positives = 174/346 (50%), Gaps = 7/346 (2%)
Query: 263 MVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQED 322
++ T+LI Y + G V+ A +F+EM +++VAW AMI GYA + + ++ C M +
Sbjct: 46 ILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQ 105
Query: 323 NLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFA 382
P+ T+ ++L SC L G +HG ++ L ++ A+++MY C A
Sbjct: 106 GTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEA 165
Query: 383 EC-VFGRINEKNMVSWNAIIAAYVQNGRNEEALELFH--CLRNQTLKPDAVTIASILPAY 439
C +F I KN V+W +I + G L+++ L N + P +TIA + A
Sbjct: 166 ACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIA--VRAS 223
Query: 440 AELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWN 499
A + +V+ KQIHA + K SN N+I+ +Y +CG L A+ YF M K+L++WN
Sbjct: 224 ASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWN 283
Query: 500 TMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMD 559
T+I + ++ +F R + G PN TF SL+++C+ +N G +L +
Sbjct: 284 TLISELE-RSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRI-FR 341
Query: 560 YNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLL 605
+ +E ++D+ + GN+ +++ E+ W S++
Sbjct: 342 RGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMM 387
>AT4G08210.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:5183813-5185873 REVERSE
Length = 686
Score = 301 bits (771), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 184/628 (29%), Positives = 315/628 (50%), Gaps = 36/628 (5%)
Query: 70 FVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRM-EYEGIGIDNFT 128
+VD + +A +F++M++ + W ++ G+++ G + I+ Y RM + E + F
Sbjct: 50 YVDFRLLSDAHKVFDEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFM 109
Query: 129 FPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFK--------------- 173
+ V+KACG + G V+ ++ K L D+ + NS++DMY K
Sbjct: 110 YSAVLKACGLVGDIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEIL 169
Query: 174 ----------------FGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKE 217
G ++ A +F MP ++VSWNC+++G+ G ++L
Sbjct: 170 RPSSTSWNTLISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGSP-RALEFLVR 228
Query: 218 MLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGK 277
M G D ++ L CS G + GK++HC V+++GLE ++LIDMY+ CG
Sbjct: 229 MQREGLVLDGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGS 288
Query: 278 VDYAERVFNE---MTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINL 334
+ YA VF++ ++ WN+M+ G+ IN + L ++ + +L D+ T+
Sbjct: 289 LIYAADVFHQEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGA 348
Query: 335 LPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNM 394
L C + L G +H + + ++ + LVD++ G ++ A +F R+ K++
Sbjct: 349 LKICINYVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDI 408
Query: 395 VSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAY 454
++++ +I V++G N A LF L L D +++IL + LA++ KQIH
Sbjct: 409 IAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGL 468
Query: 455 ITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTIS 514
K S T+ A+V MY KCG++ FD M +++VSW +I+ + +G +
Sbjct: 469 CIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEA 528
Query: 515 IQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVD 574
+ F +M GIEPN+ TF+ LLS+C SGL+ E +MK +Y ++ +EHY C+VD
Sbjct: 529 FRYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVD 588
Query: 575 LLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTASRNNNDIFFAEFAAKHILSHDNDNTGC 634
LLG+ G A + I +MPL P IW SLLTA + + A+ +L D+
Sbjct: 589 LLGQAGLFQEANELINKMPLEPDKTIWTSLLTACGTHKNAGLVTVIAEKLLKGFPDDPSV 648
Query: 635 YVLLANMYAEAGRWEDVEQIKLVMKKKG 662
Y L+N YA G W+ + +++ KK G
Sbjct: 649 YTSLSNAYATLGMWDQLSKVREAAKKLG 676
Score = 211 bits (537), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 145/522 (27%), Positives = 259/522 (49%), Gaps = 19/522 (3%)
Query: 34 NPRIRKSNPTKKQMSETPKRGMIKPNSLSLTRSLCEFVDSGAMDNALYLFEKMNQPDTYI 93
N R+ ++N + K++ ++P+S S + + +G MD A+ LF +M QP+
Sbjct: 155 NGRLIEANSSFKEI--------LRPSSTSWNTLISGYCKAGLMDEAVTLFHRMPQPNVVS 206
Query: 94 WNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKAC--GRLLSFIEGKKVHGK 151
WN +I GF +KG ++F RM+ EG+ +D F P +KAC G LL+ GK++H
Sbjct: 207 WNCLISGFVDKG-SPRALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTM--GKQLHCC 263
Query: 152 LIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPL---RDLVSWNCMVNGYRVIGDG 208
++K GL+ + ++LIDMY G + A VF L + WN M++G+ + +
Sbjct: 264 VVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFLINEEN 323
Query: 209 LKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSL 268
+L ++ D ++ +L C +R G ++H V+ +G ELD +V + L
Sbjct: 324 EAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYELDYIVGSIL 383
Query: 269 IDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDA 328
+D++A G + A ++F+ + K+I+A++ +I G +G +F + + + L D
Sbjct: 384 VDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQ 443
Query: 329 ITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGR 388
+ N+L CS +L GK IHG I+K + V TALVDMY KCG++ +F
Sbjct: 444 FIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDG 503
Query: 389 INEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSEC 448
+ E+++VSW II + QNGR EEA FH + N ++P+ VT +L A + E
Sbjct: 504 MLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEA 563
Query: 449 KQ-IHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFK-NLVSWNTMIMAYA 506
+ + ++ L +V + + G Q A + M + + W +++ A
Sbjct: 564 RSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELINKMPLEPDKTIWTSLLTACG 623
Query: 507 IHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNE 548
H + + + + G + S + SL ++ + G+ ++
Sbjct: 624 THKNAGL-VTVIAEKLLKGFPDDPSVYTSLSNAYATLGMWDQ 664
Score = 166 bits (420), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 113/454 (24%), Positives = 217/454 (47%), Gaps = 40/454 (8%)
Query: 133 IKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDL 192
++ CG++ +F G+ + +IK G+ +++++ N++I MY F + A KVF+ M R++
Sbjct: 12 LRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNI 71
Query: 193 VSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISS-LGGCSIGCCVRGGKEIHC 251
V+W MV+GY G K++ ++ ML E+ M S+ L C + ++ G ++
Sbjct: 72 VTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYE 131
Query: 252 QVIRNGLELDIMVQTSLIDMYAKCGKV-------------------------------DY 280
++ + L D+++ S++DMY K G++ D
Sbjct: 132 RIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDE 191
Query: 281 AERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSK 340
A +F+ M N+V+WN +I G+ G + L RMQ + L+ D + L +CS
Sbjct: 192 AVTLFHRMPQPNVVSWNCLISGFVDKGS-PRALEFLVRMQREGLVLDGFALPCGLKACSF 250
Query: 341 FGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGR----INEKNMVS 396
G L GK +H ++ +AL+DMY CG L +A VF + +N V
Sbjct: 251 GGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAV- 309
Query: 397 WNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYIT 456
WN++++ ++ N NE AL L + L D+ T++ L + Q+H+ +
Sbjct: 310 WNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVV 369
Query: 457 KLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQ 516
+ + +V ++A G++Q A + F + K++++++ +I GF +++
Sbjct: 370 VSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFY 429
Query: 517 LFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGW 550
LF + + G++ ++ ++L C S L + GW
Sbjct: 430 LFRELIKLGLDADQFIVSNILKVC--SSLASLGW 461
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 89/181 (49%), Gaps = 3/181 (1%)
Query: 428 DAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYF 487
D IA+ L ++ + I A++ K +S N F +N ++ MY L A + F
Sbjct: 4 DLKLIAAGLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVF 63
Query: 488 DSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIE-PNESTFVSLLSSCSISGLV 546
D MS +N+V+W TM+ Y G +I+L+ RM + E NE + ++L +C + G +
Sbjct: 64 DEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDI 123
Query: 547 NEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLT 606
G ++ + + N+ + +VD+ + G L A +E+ L P++ W +L++
Sbjct: 124 QLGILVYERIGKE-NLRGDVVLMNSVVDMYVKNGRLIEANSSFKEI-LRPSSTSWNTLIS 181
Query: 607 A 607
Sbjct: 182 G 182
>AT5G06540.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1999181-2001049 REVERSE
Length = 622
Score = 301 bits (770), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 184/595 (30%), Positives = 312/595 (52%), Gaps = 41/595 (6%)
Query: 247 KEIHCQVIRNGLELDIMVQTSLIDMYA-------KCGKVDYAERVFNEMTCKNIVAWNAM 299
K IH ++R L D+ V + L+ + + YA +F+++ N+ +N +
Sbjct: 29 KIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFSQIQNPNLFVFNLL 88
Query: 300 IGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMF 359
I ++ ++F +M + + PD IT L+ + S+ +L G+ H +R F
Sbjct: 89 IRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGEQTHSQIVRFGF 148
Query: 360 LPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAY-----VQNGRN---- 410
+ +E +LV MY CG + A +FG++ +++VSW +++A Y V+N R
Sbjct: 149 QNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDE 208
Query: 411 ----------------------EEALELFHCLRNQTLKPDAVTIASILPAYAELATVSEC 448
E+A++LF ++ + + + + S++ + A L +
Sbjct: 209 MPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFG 268
Query: 449 KQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIH 508
++ + Y+ K ++ N A+V M+ +CGD++ A F+ + + +SW+++I A+H
Sbjct: 269 ERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVH 328
Query: 509 GFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEH 568
G ++ FS+M G P + TF ++LS+CS GLV +G E++ +MK D+ I+ +EH
Sbjct: 329 GHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEH 388
Query: 569 YGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTASRNNNDIFFAEFAAKHILSHD 628
YGC+VD+LGR G L A+ FI +M + P A I G+LL A + + AE ++
Sbjct: 389 YGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKNTEVAERVGNMLIKVK 448
Query: 629 NDNTGCYVLLANMYAEAGRWEDVEQIKLVMKKKGLAKTVDCCTVESKGKSQKF-INNNKS 687
+++G YVLL+N+YA AG+W+ +E ++ +MK+K + K +E GK KF + +++
Sbjct: 449 PEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSLIEIDGKINKFTMGDDQK 508
Query: 688 HQQAYMIYDVLDIILKKIGEDVYI-HSLSKFRPADVIKKKMKSPQNHSVKLAICFGLIST 746
H + I + IL KI Y ++ F D ++K S HS KLAI +G++ T
Sbjct: 509 HPEMGKIRRKWEEILGKIRLIGYKGNTGDAFFDVDE-EEKESSIHMHSEKLAIAYGMMKT 567
Query: 747 AIGKPIIIRKNTRICKDCHIAAKKISRVTKREIIVGDSKIFHHFEDGRCSCGDYW 801
G I I KN R+C+DCH K IS V RE+IV D FHHF +G CSC DYW
Sbjct: 568 KPGTTIRIVKNLRVCEDCHTVTKLISEVYGRELIVRDRNRFHHFRNGVCSCRDYW 622
Score = 152 bits (383), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 168/337 (49%), Gaps = 32/337 (9%)
Query: 79 ALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGR 138
A +F ++ P+ +++N++IR FS + FY +M I DN TFPF+IKA
Sbjct: 70 AYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSE 129
Query: 139 LLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCM 198
+ + G++ H ++++ G D+YV NSL+ MY GF+ A ++F M RD+VSW M
Sbjct: 130 MECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSM 189
Query: 199 VNGY------------------------RVIGDGLKSLMCFKEMLGL-------GEKPDR 227
V GY ++ +G CF++ + L G +
Sbjct: 190 VAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANE 249
Query: 228 LSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNE 287
M+S + C+ + G+ + V+++ + +++++ T+L+DM+ +CG ++ A VF
Sbjct: 250 TVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEG 309
Query: 288 MTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEG 347
+ + ++W+++I G A++GH ++ +M IP +T +L +CS G + +G
Sbjct: 310 LPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKG 369
Query: 348 KCIHGYAIRKMFL-PHLVLETALVDMYGKCGQLKFAE 383
I+ + + P L +VDM G+ G+L AE
Sbjct: 370 LEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAE 406
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 98/392 (25%), Positives = 178/392 (45%), Gaps = 39/392 (9%)
Query: 141 SFIEGKKVHGKLIKIGLDRDIYVCNSLI-----DMYFK--FGFVEVAEKVFEAMPLRDLV 193
SF + K +HG L++ L D++V + L+ D F + A +F + +L
Sbjct: 24 SFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFSQIQNPNLF 83
Query: 194 SWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQV 253
+N ++ + + K+ + +ML PD ++ + S CV G++ H Q+
Sbjct: 84 VFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGEQTHSQI 143
Query: 254 IRNGLELDIMVQTSLIDMYA-------------------------------KCGKVDYAE 282
+R G + D+ V+ SL+ MYA KCG V+ A
Sbjct: 144 VRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAR 203
Query: 283 RVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFG 342
+F+EM +N+ W+ MI GYA N F ++ + M+ + ++ + M++++ SC+ G
Sbjct: 204 EMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLG 263
Query: 343 TLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIA 402
L G+ + Y ++ +L+L TALVDM+ +CG ++ A VF + E + +SW++II
Sbjct: 264 ALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIK 323
Query: 403 AYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLE-LS 461
+G +A+ F + + P VT ++L A + V + +I+ + K +
Sbjct: 324 GLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIE 383
Query: 462 SNTFTSNAIVYMYAKCGDLQTARRYFDSMSFK 493
IV M + G L A + M K
Sbjct: 384 PRLEHYGCIVDMLGRAGKLAEAENFILKMHVK 415
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 129/247 (52%), Gaps = 2/247 (0%)
Query: 61 LSLTRSLCEFVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYE 120
+S T + + G ++NA +F++M + + W+++I G++ F++ ID + M+ E
Sbjct: 184 VSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKRE 243
Query: 121 GIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVA 180
G+ + VI +C L + G++ + ++K + ++ + +L+DM+++ G +E A
Sbjct: 244 GVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKA 303
Query: 181 EKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIG 240
VFE +P D +SW+ ++ G V G K++ F +M+ LG P ++ + L CS G
Sbjct: 304 IHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHG 363
Query: 241 CCVRGGKEIHCQVIRN-GLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCK-NIVAWNA 298
V G EI+ + ++ G+E + ++DM + GK+ AE +M K N A
Sbjct: 364 GLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGA 423
Query: 299 MIGGYAI 305
++G I
Sbjct: 424 LLGACKI 430
>AT3G56550.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:20952896-20954641 REVERSE
Length = 581
Score = 300 bits (767), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 175/567 (30%), Positives = 294/567 (51%), Gaps = 19/567 (3%)
Query: 247 KEIHCQVIRNGLELDIMVQTSLIDMYAK--CGKVDYAERVFNEMTCKNIVA-WNAMIGGY 303
++IH VI NGL+ + L+ A G + +A+ +F+ + WN +I G+
Sbjct: 22 RKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDHFDSDPSTSDWNYLIRGF 81
Query: 304 AINGHFLESFTCLKRMQEDNLI-PDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPH 362
+ + L S RM ++ PD T L SC + ++ + IHG IR FL
Sbjct: 82 SNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCLEIHGSVIRSGFLDD 141
Query: 363 LVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRN 422
++ T+LV Y G ++ A VF + +++VSWN +I + G + +AL ++ + N
Sbjct: 142 AIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMGN 201
Query: 423 QTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQT 482
+ + D+ T+ ++L + A ++ ++ +H + S F SNA++ MYAKCG L+
Sbjct: 202 EGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLEN 261
Query: 483 ARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSI 542
A F+ M +++++WN+MI+ Y +HG G +I F +M +G+ PN TF+ LL CS
Sbjct: 262 AIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLLGCSH 321
Query: 543 SGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWG 602
GLV EG E F M +++ ++HYGCMVDL GR G L+ + + I +W
Sbjct: 322 QGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHEDPVLWR 381
Query: 603 SLLTASRNNNDIFFAEFAAKHILSHDNDNTGCYVLLANMYAEAGRWEDVEQIKLVMKKKG 662
+LL + + + ++ E A K ++ + N G YVL+ ++Y+ A + ++ +++
Sbjct: 382 TLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSAANDAQAFASMRKLIRSHD 441
Query: 663 LAKTVDCCTVESKGKSQKFINNNKSHQQAYMIYDVLDIILKKIGEDVYIHSLSKFRPADV 722
L +E + KF+ ++K H ++ +IY ++GE + L+ ++P D
Sbjct: 442 LQTVPGWSWIEIGDQVHKFVVDDKMHPESAVIY-------SELGEVINRAILAGYKPEDS 494
Query: 723 IKKKM--------KSPQNHSVKLAICFGLISTAIGKPIIIRKNTRICKDCHIAAKKISRV 774
+ + +HS KLAI +GL+ T G + I KN R+C+DCH K +S+
Sbjct: 495 NRTAPTLSDRCLGSADTSHSEKLAIAYGLMRTTAGTTLRITKNLRVCRDCHSFTKYVSKA 554
Query: 775 TKREIIVGDSKIFHHFEDGRCSCGDYW 801
REIIV D FHHF DG CSC DYW
Sbjct: 555 FNREIIVRDRVRFHHFADGICSCNDYW 581
Score = 189 bits (481), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 115/342 (33%), Positives = 184/342 (53%), Gaps = 6/342 (1%)
Query: 67 LCEFVDSGAMDNALYLFEKMNQ-PDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIG-I 124
C +G++ +A LF+ + P T WN +IRGFSN I FY+RM +
Sbjct: 46 FCAVSVTGSLSHAQLLFDHFDSDPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRP 105
Query: 125 DNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVF 184
D FTF F +K+C R+ S + ++HG +I+ G D V SL+ Y G VE+A KVF
Sbjct: 106 DLFTFNFALKSCERIKSIPKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVF 165
Query: 185 EAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVR 244
+ MP+RDLVSWN M+ + +G ++L +K M G D ++++ L C+ +
Sbjct: 166 DEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALN 225
Query: 245 GGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYA 304
G +H E + V +LIDMYAKCG ++ A VFN M ++++ WN+MI GY
Sbjct: 226 MGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYG 285
Query: 305 INGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMF--LPH 362
++GH +E+ + ++M + P+AIT + LL CS G + EG H + F P+
Sbjct: 286 VHGHGVEAISFFRKMVASGVRPNAITFLGLLLGCSHQGLVKEG-VEHFEIMSSQFHLTPN 344
Query: 363 LVLETALVDMYGKCGQLKFA-ECVFGRINEKNMVSWNAIIAA 403
+ +VD+YG+ GQL+ + E ++ ++ V W ++ +
Sbjct: 345 VKHYGCMVDLYGRAGQLENSLEMIYASSCHEDPVLWRTLLGS 386
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 132/237 (55%), Gaps = 4/237 (1%)
Query: 73 SGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFV 132
+G+++ A +F++M D WNV+I FS+ GL + + Y RM EG+ D++T +
Sbjct: 155 NGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVAL 214
Query: 133 IKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDL 192
+ +C + + G +H I + ++V N+LIDMY K G +E A VF M RD+
Sbjct: 215 LSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDV 274
Query: 193 VSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQ 252
++WN M+ GY V G G++++ F++M+ G +P+ ++ + L GCS V+ G E H +
Sbjct: 275 LTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLLGCSHQGLVKEGVE-HFE 333
Query: 253 VIRNGLELDIMVQT--SLIDMYAKCGKVDYAERVFNEMTC-KNIVAWNAMIGGYAIN 306
++ + L V+ ++D+Y + G+++ + + +C ++ V W ++G I+
Sbjct: 334 IMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHEDPVLWRTLLGSCKIH 390
>AT3G29230.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:11188803-11190605 FORWARD
Length = 600
Score = 300 bits (767), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 182/562 (32%), Positives = 299/562 (53%), Gaps = 12/562 (2%)
Query: 146 KKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVI 205
K++H ++I+ L D+++ LI +A +VF + ++ N ++ +
Sbjct: 36 KQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLCNSLIRAHAQN 95
Query: 206 GDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQ 265
++ F EM G D + L CS + K +H + + GL DI V
Sbjct: 96 SQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVP 155
Query: 266 TSLIDMYAKCGK--VDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDN 323
+LID Y++CG V A ++F +M+ ++ V+WN+M+GG G ++ M + +
Sbjct: 156 NALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQRD 215
Query: 324 LIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAE 383
LI TM++ C + E KM + V + +V Y K G ++ A
Sbjct: 216 LI-SWNTMLDGYARCREMSKAFE-------LFEKMPERNTVSWSTMVMGYSKAGDMEMAR 267
Query: 384 CVFGR--INEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAE 441
+F + + KN+V+W IIA Y + G +EA L + LK DA + SIL A E
Sbjct: 268 VMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTE 327
Query: 442 LATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTM 501
+S +IH+ + + L SN + NA++ MYAKCG+L+ A F+ + K+LVSWNTM
Sbjct: 328 SGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTM 387
Query: 502 IMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYN 561
+ +HG G +I+LFSRM++ GI P++ TF+++L SC+ +GL++EG + F SM+ Y+
Sbjct: 388 LHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYD 447
Query: 562 IDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTASRNNNDIFFAEFAA 621
+ +EHYGC+VDLLGR G L A + ++ MP+ P IWG+LL A R +N++ A+
Sbjct: 448 LVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVL 507
Query: 622 KHILSHDNDNTGCYVLLANMYAEAGRWEDVEQIKLVMKKKGLAKTVDCCTVESKGKSQKF 681
+++ D + G Y LL+N+YA A WE V I+ MK G+ K +VE + +F
Sbjct: 508 DNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGASSVELEDGIHEF 567
Query: 682 INNNKSHQQAYMIYDVLDIILK 703
+KSH ++ IY +L +++
Sbjct: 568 TVFDKSHPKSDQIYQMLGSLIE 589
Score = 190 bits (482), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 139/479 (29%), Positives = 237/479 (49%), Gaps = 19/479 (3%)
Query: 79 ALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGR 138
A+ +F ++ +P+ ++ N +IR + + + M+ G+ DNFT+PF++KAC
Sbjct: 70 AVRVFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSG 129
Query: 139 LLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEV--AEKVFEAMPLRDLVSWN 196
K +H + K+GL DIYV N+LID Y + G + V A K+FE M RD VSWN
Sbjct: 130 QSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWN 189
Query: 197 CMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRN 256
M+ G G+ + F EM + D +S + L G C K ++
Sbjct: 190 SMLGGLVKAGELRDARRLFDEM----PQRDLISWNTMLDG--YARCREMSKAF--ELFEK 241
Query: 257 GLELDIMVQTSLIDMYAKCGKVDYAERVFNEM--TCKNIVAWNAMIGGYAINGHFLESFT 314
E + + ++++ Y+K G ++ A +F++M KN+V W +I GYA G E+
Sbjct: 242 MPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADR 301
Query: 315 CLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYG 374
+ +M L DA +I++L +C++ G L G IH R + + AL+DMY
Sbjct: 302 LVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYA 361
Query: 375 KCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIAS 434
KCG LK A VF I +K++VSWN ++ +G +EA+ELF +R + ++PD VT +
Sbjct: 362 KCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIA 421
Query: 435 ILPAYAELATVSECKQIHAYITKL-ELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFK 493
+L + + E + K+ +L +V + + G L+ A + +M +
Sbjct: 422 VLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPME 481
Query: 494 -NLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWE 551
N+V W ++ A +H I+ ++ + + ++P + SLLS+ + E WE
Sbjct: 482 PNVVIWGALLGACRMHNEVDIAKEVLDNLVK--LDPCDPGNYSLLSNIYAAA---EDWE 535
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 149/301 (49%), Gaps = 34/301 (11%)
Query: 21 FKQMGAPKRDLLVNPRIRKSNPTKKQMSETPK--RGMIKPNSLSLTRSLCEFVDSGAMDN 78
F +M P+RDL+ + ++MS+ + M + N++S + + + +G M+
Sbjct: 208 FDEM--PQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEM 265
Query: 79 ALYLFEKMNQP--DTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKAC 136
A +F+KM P + W +II G++ KGL +E +M G+ D ++ AC
Sbjct: 266 ARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAAC 325
Query: 137 GR--LLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVS 194
LLS G ++H L + L + YV N+L+DMY K G ++ A VF +P +DLVS
Sbjct: 326 TESGLLSL--GMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVS 383
Query: 195 WNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVI 254
WN M++G V G G +++ F M G +PD+++ I+ L C+ H +I
Sbjct: 384 WNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCN-----------HAGLI 432
Query: 255 RNGLE--------LDIMVQTS----LIDMYAKCGKVDYAERVFNEMTCK-NIVAWNAMIG 301
G++ D++ Q L+D+ + G++ A +V M + N+V W A++G
Sbjct: 433 DEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLG 492
Query: 302 G 302
Sbjct: 493 A 493
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 125/262 (47%), Gaps = 14/262 (5%)
Query: 335 LPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNM 394
LP C+ + K +H IR+ L + L+ C Q A VF ++ E N+
Sbjct: 26 LPKCANLNQV---KQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNV 82
Query: 395 VSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAY 454
N++I A+ QN + +A +F ++ L D T +L A + + + K +H +
Sbjct: 83 HLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNH 142
Query: 455 ITKLELSSNTFTSNAIVYMYAKCGDL--QTARRYFDSMSFKNLVSWNTMIMAYAIHGFGT 512
I KL LSS+ + NA++ Y++CG L + A + F+ MS ++ VSWN+M+ G
Sbjct: 143 IEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELR 202
Query: 513 ISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCM 572
+ +LF M Q + ++ ++L + +++ +ELF M + + M
Sbjct: 203 DARRLFDEMPQRDL----ISWNTMLDGYARCREMSKAFELFEKMPERNTVS-----WSTM 253
Query: 573 VDLLGRTGNLDAAKQFIEEMPL 594
V + G+++ A+ ++MPL
Sbjct: 254 VMGYSKAGDMEMARVMFDKMPL 275
>AT1G71490.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:26933326-26935371 REVERSE
Length = 681
Score = 298 bits (762), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 184/626 (29%), Positives = 311/626 (49%), Gaps = 37/626 (5%)
Query: 132 VIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRD 191
++ AC + +F+ G +VH I G++ + L+ Y F A+ + E +
Sbjct: 49 LLSACVDVRAFLAGVQVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDILH 108
Query: 192 LVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHC 251
+ WN ++ Y + + +K M+ G +PD + S L C V G+ +H
Sbjct: 109 PLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHG 168
Query: 252 QVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLE 311
+ + + + V +LI MY + + A R+F+ M ++ V+WNA+I YA G + E
Sbjct: 169 SIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSE 228
Query: 312 SFTCLKRM--------------------QEDNLIP---------------DAITMINLLP 336
+F +M Q N + D + MI L
Sbjct: 229 AFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLK 288
Query: 337 SCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVS 396
+CS G + GK IHG AI + + L+ MY KC L+ A VF + E ++ +
Sbjct: 289 ACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCT 348
Query: 397 WNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYIT 456
WN+II+ Y Q ++EEA L + +P+++T+ASILP A +A + K+ H YI
Sbjct: 349 WNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYIL 408
Query: 457 KLE-LSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISI 515
+ + T N++V +YAK G + A++ D MS ++ V++ ++I Y G G +++
Sbjct: 409 RRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVAL 468
Query: 516 QLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDL 575
LF M ++GI+P+ T V++LS+CS S LV+EG LF M+ +Y I ++H+ CMVDL
Sbjct: 469 ALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDL 528
Query: 576 LGRTGNLDAAKQFIEEMPLVPTARIWGSLLTASRNNNDIFFAEFAAKHILSHDNDNTGCY 635
GR G L AK I MP P+ W +LL A + + ++AA+ +L +N G Y
Sbjct: 529 YGRAGFLAKAKDIIHNMPYKPSGATWATLLNACHIHGNTQIGKWAAEKLLEMKPENPGYY 588
Query: 636 VLLANMYAEAGRWEDVEQIKLVMKKKGLAKTVDCCTVESKGKSQKFINNNKSHQQAYMIY 695
VL+ANMYA AG W + +++ +M+ G+ K C +++ F + S +A Y
Sbjct: 589 VLIANMYAAAGSWSKLAEVRTIMRDLGVKKDPGCAWIDTDSGFSLFSVGDTSSPEACNTY 648
Query: 696 DVLDIILKKIGEDVYIHSLSKFRPAD 721
+LD L ++ +D ++++K + +D
Sbjct: 649 PLLD-GLNQLMKDNAGYAINKVQSSD 673
Score = 206 bits (525), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 140/454 (30%), Positives = 228/454 (50%), Gaps = 38/454 (8%)
Query: 94 WNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLI 153
WNV+I ++ LF+EVI Y RM +GI D FT+P V+KACG L G+ VHG +
Sbjct: 112 WNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIE 171
Query: 154 KIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLM 213
+YVCN+LI MY +F + +A ++F+ M RD VSWN ++N Y G ++
Sbjct: 172 VSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFE 231
Query: 214 CFKEM----------------------------LGLGEK----P---DRLSMISSLGGCS 238
F +M LGL + P D ++MI L CS
Sbjct: 232 LFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACS 291
Query: 239 IGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNA 298
+ +R GKEIH I + + V+ +LI MY+KC + +A VF + ++ WN+
Sbjct: 292 LIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNS 351
Query: 299 MIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAI-RK 357
+I GYA E+ L+ M P++IT+ ++LP C++ L GK H Y + RK
Sbjct: 352 IISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRK 411
Query: 358 MFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELF 417
F + +L +LVD+Y K G++ A+ V +++++ V++ ++I Y G AL LF
Sbjct: 412 CFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALF 471
Query: 418 HCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYIT-KLELSSNTFTSNAIVYMYAK 476
+ +KPD VT+ ++L A + V E +++ + + + + +V +Y +
Sbjct: 472 KEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGR 531
Query: 477 CGDLQTARRYFDSMSFK-NLVSWNTMIMAYAIHG 509
G L A+ +M +K + +W T++ A IHG
Sbjct: 532 AGFLAKAKDIIHNMPYKPSGATWATLLNACHIHG 565
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 101/400 (25%), Positives = 161/400 (40%), Gaps = 37/400 (9%)
Query: 229 SMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEM 288
S S L C G ++H I +G+E ++ L+ Y+ + A+ +
Sbjct: 45 SAASLLSACVDVRAFLAGVQVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENS 104
Query: 289 TCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGK 348
+ + WN +I YA N F E KRM + PDA T ++L +C + + G+
Sbjct: 105 DILHPLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGR 164
Query: 349 CIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNG 408
+HG + L + AL+ MY + + A +F R+ E++ VSWNA+I Y G
Sbjct: 165 VVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEG 224
Query: 409 RNEEALELFH--------------------CL---------------RNQTLKPDAVTIA 433
EA ELF CL RN D V +
Sbjct: 225 MWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMI 284
Query: 434 SILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFK 493
L A + + + K+IH N ++ MY+KC DL+ A F
Sbjct: 285 IGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEEN 344
Query: 494 NLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELF 553
+L +WN++I YA + L M G +PN T S+L C+ + G E
Sbjct: 345 SLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFH 404
Query: 554 -NSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEM 592
++ DY + + +VD+ ++G + AAKQ + M
Sbjct: 405 CYILRRKCFKDYTML-WNSLVDVYAKSGKIVAAKQVSDLM 443
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 121/250 (48%), Gaps = 5/250 (2%)
Query: 300 IGGYAINGHFLESFTC--LKRMQEDNLIPDAITM---INLLPSCSKFGTLLEGKCIHGYA 354
+G A +GH ++F L R+Q + + D + + +LL +C L G +H +
Sbjct: 10 LGHLASHGHLHDAFKTFSLLRLQSSSAVSDDLVLHSAASLLSACVDVRAFLAGVQVHAHC 69
Query: 355 IRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEAL 414
I H VL LV Y A+ + + + + WN +IA+Y +N EE +
Sbjct: 70 ISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDILHPLPWNVLIASYAKNELFEEVI 129
Query: 415 ELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMY 474
+ + ++ ++PDA T S+L A E V+ + +H I S+ + NA++ MY
Sbjct: 130 AAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMY 189
Query: 475 AKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFV 534
+ ++ ARR FD M ++ VSWN +I YA G + + +LF +M +G+E + T+
Sbjct: 190 KRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWN 249
Query: 535 SLLSSCSISG 544
+ C +G
Sbjct: 250 IISGGCLQTG 259
Score = 92.8 bits (229), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 117/236 (49%), Gaps = 3/236 (1%)
Query: 76 MDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKA 135
+ +AL +F + + WN II G++ +E M G ++ T ++
Sbjct: 331 LRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPL 390
Query: 136 CGRLLSFIEGKKVHGKLIKIGLDRD-IYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVS 194
C R+ + GK+ H +++ +D + NSL+D+Y K G + A++V + M RD V+
Sbjct: 391 CARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVT 450
Query: 195 WNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQV- 253
+ +++GY G+G +L FKEM G KPD +++++ L CS V G+ + ++
Sbjct: 451 YTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQ 510
Query: 254 IRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVA-WNAMIGGYAINGH 308
G+ + + ++D+Y + G + A+ + + M K A W ++ I+G+
Sbjct: 511 CEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYKPSGATWATLLNACHIHGN 566
>AT1G77010.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28942710-28944797 FORWARD
Length = 695
Score = 298 bits (762), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 188/676 (27%), Positives = 326/676 (48%), Gaps = 105/676 (15%)
Query: 52 KRGMIKPNSLSLTRSLCEFVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVI 111
K+G + + L + SG M A LF++M + + WN +I G+ N G +
Sbjct: 54 KKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMNSGEKGTSL 113
Query: 112 DFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMY 171
F+ M +RD Y N ++ +
Sbjct: 114 RFFDMMP---------------------------------------ERDGYSWNVVVSGF 134
Query: 172 FKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMI 231
K G + VA ++F AMP +D+V+ N +++GY + G ++L FKE L D +++
Sbjct: 135 AKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKE---LNFSADAITLT 191
Query: 232 SSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCG--------------- 276
+ L C+ ++ GK+IH Q++ G+E D + +SL+++YAKCG
Sbjct: 192 TVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREP 251
Query: 277 ----------------KVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQ 320
+V+ + +F+ + + ++ WN+MI GY N +E+ M+
Sbjct: 252 DDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMR 311
Query: 321 EDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCG--- 377
+ D+ T+ ++ +C G L GK +H +A + + +V+ + L+DMY KCG
Sbjct: 312 NETR-EDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPM 370
Query: 378 ----------------------------QLKFAECVFGRINEKNMVSWNAIIAAYVQNGR 409
++ A+ VF RI K+++SWN++ + QNG
Sbjct: 371 EACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGC 430
Query: 410 NEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNA 469
E LE FH + L D V+++S++ A A ++++ +Q+ A T + L S+ S++
Sbjct: 431 TVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSS 490
Query: 470 IVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPN 529
++ +Y KCG ++ RR FD+M + V WN+MI YA +G G +I LF +M GI P
Sbjct: 491 LIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPT 550
Query: 530 ESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFI 589
+ TF+ +L++C+ GLV EG +LF SMK+D+ EH+ CMVDLL R G ++ A +
Sbjct: 551 QITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLV 610
Query: 590 EEMPLVPTARIWGSLLTASRNNNDIFFAEFAAKHILSHDNDNTGCYVLLANMYAEAGRWE 649
EEMP +W S+L N + AA+ I+ + +N+ YV L+ ++A +G WE
Sbjct: 611 EEMPFDVDGSMWSSILRGCVANGYKAMGKKAAEKIIELEPENSVAYVQLSAIFATSGDWE 670
Query: 650 DVEQIKLVMKKKGLAK 665
++ +M++ + K
Sbjct: 671 SSALVRKLMRENNVTK 686
>AT2G35030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:14761080-14762963 REVERSE
Length = 627
Score = 295 bits (754), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 193/651 (29%), Positives = 324/651 (49%), Gaps = 95/651 (14%)
Query: 58 PNSLSLTRSLCEFVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRM 117
P L LC+ G + A LF+ + + D W +I G+ G +E + + R+
Sbjct: 47 PQPEWLIGELCKV---GKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRV 103
Query: 118 EYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFV 177
+ +++ +++ Y + +
Sbjct: 104 DSR--------------------------------------KNVVTWTAMVSGYLRSKQL 125
Query: 178 EVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGC 237
+AE +F+ MP R++VSWN M++GY G K+L F EM P+R I S
Sbjct: 126 SIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEM------PER--NIVSWNSM 177
Query: 238 SIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWN 297
RG + + D++ T+++D AK GKVD A R+F+ M +NI++WN
Sbjct: 178 VKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWN 237
Query: 298 AMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRK 357
AMI GYA N E+ + M E + + + T++ G
Sbjct: 238 AMITGYAQNNRIDEADQLFQVMPERDF--------------ASWNTMITG---------- 273
Query: 358 MFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELF 417
F+ + + A CG +F R+ EKN++SW +I YV+N NEEAL +F
Sbjct: 274 -FIRNREMNKA-------CG-------LFDRMPEKNVISWTTMITGYVENKENEEALNVF 318
Query: 418 -HCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAK 476
LR+ ++KP+ T SIL A ++LA + E +QIH I+K N ++A++ MY+K
Sbjct: 319 SKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSK 378
Query: 477 CGDLQTARRYFDS--MSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFV 534
G+L AR+ FD+ + ++L+SWN+MI YA HG G +I+++++M+++G +P+ T++
Sbjct: 379 SGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYL 438
Query: 535 SLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPL 594
+LL +CS +GLV +G E F + D ++ EHY C+VDL GR G L FI
Sbjct: 439 NLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCGRAGRLKDVTNFINCDDA 498
Query: 595 VPTARIWGSLLTASRNNNDIFFAEFAAKHILSHDNDNTGCYVLLANMYAEAGRWEDVEQI 654
+ +G++L+A +N++ A+ K +L +D+ G YVL++N+YA G+ E+ ++
Sbjct: 499 RLSRSFYGAILSACNVHNEVSIAKEVVKKVLETGSDDAGTYVLMSNIYAANGKREEAAEM 558
Query: 655 KLVMKKKGLAKTVDCCTVESKGKSQKFINNNKSHQQAYMIYDVLDIILKKI 705
++ MK+KGL K C V+ ++ F+ +KSH Q ++ LD IL +
Sbjct: 559 RMKMKEKGLKKQPGCSWVKVGKQNHLFVVGDKSHPQ----FEALDSILSDL 605
Score = 143 bits (361), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 125/548 (22%), Positives = 248/548 (45%), Gaps = 70/548 (12%)
Query: 25 GAPKRDLLVNPRIRKSNPTKKQMSETPK---RGMIKPNSLSLTRSLCEFVDSGAMDNALY 81
G P+RD++ + M E + R + N ++ T + ++ S + A
Sbjct: 71 GLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVTWTAMVSGYLRSKQLSIAEM 130
Query: 82 LFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLS 141
LF++M + + WN +I G++ G + ++ + M I ++ ++KA +
Sbjct: 131 LFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNI----VSWNSMVKALVQRGR 186
Query: 142 FIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNG 201
E + ++ + RD+ +++D K G V+ A ++F+ MP R+++SWN M+ G
Sbjct: 187 IDEAMNLFERMPR----RDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITG 242
Query: 202 YRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELD 261
Y ++ F+ M P+R S + G IRN
Sbjct: 243 YAQNNRIDEADQLFQVM------PER-------DFASWNTMITG-------FIRNR---- 278
Query: 262 IMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQE 321
+M CG +F+ M KN+++W MI GY N E+ +M
Sbjct: 279 --------EMNKACG-------LFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLR 323
Query: 322 DNLI-PDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLK 380
D + P+ T +++L +CS L+EG+ IH + + + ++ +AL++MY K G+L
Sbjct: 324 DGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELI 383
Query: 381 FAECVF--GRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPA 438
A +F G + +++++SWN++IA Y +G +EA+E+++ +R KP AVT ++L A
Sbjct: 384 AARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFA 443
Query: 439 YAELATVSECKQIHAYITK---LELSSNTFTSNAIVYMYAKCGDLQTARRYFD------S 489
+ V + + + + L L +T +V + + G L+ + + S
Sbjct: 444 CSHAGLVEKGMEFFKDLVRDESLPLREEHYT--CLVDLCGRAGRLKDVTNFINCDDARLS 501
Query: 490 MSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEG 549
SF + ++ A +H +I+ ++ ++ + G + + T+V + + + +G E
Sbjct: 502 RSF-----YGAILSACNVHNEVSIAKEVVKKVLETGSD-DAGTYVLMSNIYAANGKREEA 555
Query: 550 WELFNSMK 557
E+ MK
Sbjct: 556 AEMRMKMK 563
>AT1G53600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:20001263-20005795 FORWARD
Length = 839
Score = 294 bits (753), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 187/638 (29%), Positives = 315/638 (49%), Gaps = 91/638 (14%)
Query: 59 NSLSLTRSLCEFVDSGAMDNALYLFEK--MNQPDTYIWNVIIRGFSNKGLFQEVIDFYHR 116
N++S + FV +G D A +L+ + + D+ NV++ G+ G + E + +
Sbjct: 143 NAVSYATMITGFVRAGRFDEAEFLYAETPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQG 202
Query: 117 MEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGF 176
M +++ C+S++ Y K G
Sbjct: 203 MAV---------------------------------------KEVVSCSSMVHGYCKMGR 223
Query: 177 VEVAEKVFEAMPLRDLVSWNCMVNGYRVIG---DGLKSLMCFKEMLGLGEKPDRLSMISS 233
+ A +F+ M R++++W M++GY G DG + ++ + + L+++
Sbjct: 224 IVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVM-- 281
Query: 234 LGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNI 293
C R G +IH V R LE D+ + SL+ MY+K G + A+ VF M K+
Sbjct: 282 FKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDS 341
Query: 294 VAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGY 353
V+WN++I G E++ ++M +++
Sbjct: 342 VSWNSLITGLVQRKQISEAYELFEKMPGKDMV---------------------------- 373
Query: 354 AIRKMFLPHLVLETALVDMY-GKCGQLKFAECV--FGRINEKNMVSWNAIIAAYVQNGRN 410
+ DM G G+ + ++CV FG + EK+ ++W A+I+A+V NG
Sbjct: 374 --------------SWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYY 419
Query: 411 EEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAI 470
EEAL FH + + + P++ T +S+L A A LA + E QIH + K+ + ++ N++
Sbjct: 420 EEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSL 479
Query: 471 VYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNE 530
V MY KCG+ A + F +S N+VS+NTMI Y+ +GFG +++LFS ++ +G EPN
Sbjct: 480 VSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNG 539
Query: 531 STFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIE 590
TF++LLS+C G V+ GW+ F SMK YNI+ G +HY CMVDLLGR+G LD A I
Sbjct: 540 VTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGRSGLLDDASNLIS 599
Query: 591 EMPLVPTARIWGSLLTASRNNNDIFFAEFAAKHILSHDNDNTGCYVLLANMYAEAGRWED 650
MP P + +WGSLL+AS+ + + AE AAK ++ + D+ YV+L+ +Y+ G+ D
Sbjct: 600 TMPCKPHSGVWGSLLSASKTHLRVDLAELAAKKLIELEPDSATPYVVLSQLYSIIGKNRD 659
Query: 651 VEQIKLVMKKKGLAKTVDCCTVESKGKSQKFINNNKSH 688
++I + K K + K + KG+ F+ ++S
Sbjct: 660 CDRIMNIKKSKRIKKDPGSSWIILKGEVHNFLAGDESQ 697
Score = 168 bits (425), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 101/387 (26%), Positives = 188/387 (48%), Gaps = 40/387 (10%)
Query: 53 RGMIKPNSLSLTRSLCEFVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVID 112
+GM +S + + + G + +A LF++M + + W +I G+ G F++
Sbjct: 201 QGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFG 260
Query: 113 FYHRMEYEG-IGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMY 171
+ RM EG + +++ T + KAC + + EG ++HG + ++ L+ D+++ NSL+ MY
Sbjct: 261 LFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMY 320
Query: 172 FKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMI 231
K G++ A+ VF M +D VSWN ++ G ++ F++M G
Sbjct: 321 SKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPG----------- 369
Query: 232 SSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCK 291
D++ T +I ++ G++ +F M K
Sbjct: 370 ----------------------------KDMVSWTDMIKGFSGKGEISKCVELFGMMPEK 401
Query: 292 NIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIH 351
+ + W AMI + NG++ E+ +M + + P++ T ++L + + L+EG IH
Sbjct: 402 DNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIH 461
Query: 352 GYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNE 411
G ++ + L ++ +LV MY KCG A +F I+E N+VS+N +I+ Y NG +
Sbjct: 462 GRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGK 521
Query: 412 EALELFHCLRNQTLKPDAVTIASILPA 438
+AL+LF L + +P+ VT ++L A
Sbjct: 522 KALKLFSMLESSGKEPNGVTFLALLSA 548
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 140/291 (48%), Gaps = 6/291 (2%)
Query: 44 KKQMSETPK--RGMIKPNSLSLTRSLCEFVDSGAMDNALYLFEKMNQPDTYIWNVIIRGF 101
+KQ+SE + M + +S T + F G + + LF M + D W +I F
Sbjct: 354 RKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAF 413
Query: 102 SNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDI 161
+ G ++E + ++H+M + + +++TF V+ A L IEG ++HG+++K+ + D+
Sbjct: 414 VSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDL 473
Query: 162 YVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGL 221
V NSL+ MY K G A K+F + ++VS+N M++GY G G K+L F +
Sbjct: 474 SVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESS 533
Query: 222 GEKPDRLSMISSLGGC-SIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDY 280
G++P+ ++ ++ L C +G G K +E ++D+ + G +D
Sbjct: 534 GKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGRSGLLDD 593
Query: 281 AERVFNEMTCK-NIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAIT 330
A + + M CK + W +++ A H L + L PD+ T
Sbjct: 594 ASNLISTMPCKPHSGVWGSLLS--ASKTHLRVDLAELAAKKLIELEPDSAT 642
>AT5G19020.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:6352771-6357083 REVERSE
Length = 939
Score = 291 bits (745), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 192/614 (31%), Positives = 313/614 (50%), Gaps = 97/614 (15%)
Query: 145 GKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGY-- 202
G+++H +++K GLD + Y+CNS+++MY K + AE VF D S+N MV+GY
Sbjct: 314 GRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAKLDSASFNIMVDGYVR 373
Query: 203 -RVIGDGLK----------------------------SLMCFKEMLGLGEKPDRLSMISS 233
R + D LK ++ F+EM LG + +++ +
Sbjct: 374 SRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATV 433
Query: 234 LGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNI 293
+ CS + + + I+ LE + V T+L+ MY C + A ++F+EM +N+
Sbjct: 434 ISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNL 493
Query: 294 VAWNAMIGGYAING------HFLESFT-------------CLKRMQEDNLI--------- 325
V WN M+ GY+ G + T CL++ Q D +
Sbjct: 494 VTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRC 553
Query: 326 ---PDAITMINLLPSCSK----------FGTL----------LEGKCIHGYAIR---KMF 359
P + M++LL + ++ GT+ L+ IH YA+ K+
Sbjct: 554 GMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLA 613
Query: 360 LP--------HLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNE 411
L H+ AL+ + K G ++ A VF + ++K++ SWNA+I+ Y Q+ +
Sbjct: 614 LQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQ 673
Query: 412 EALELF-HCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAI 470
AL LF + + +KPDA+T+ S+ A + L ++ E K+ H Y+ + N + AI
Sbjct: 674 LALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAI 733
Query: 471 VYMYAKCGDLQTARRYF---DSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIE 527
+ MYAKCG ++TA F ++S + WN +I A HG +++ L+S ++ I+
Sbjct: 734 IDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIK 793
Query: 528 PNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQ 587
PN TFV +LS+C +GLV G F SMK D+ I+ I+HYGCMVDLLG+ G L+ AK+
Sbjct: 794 PNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKE 853
Query: 588 FIEEMPLVPTARIWGSLLTASRNNNDIFFAEFAAKHILSHDNDNTGCYVLLANMYAEAGR 647
I++MP+ IWG LL+ASR + ++ AE AA + + D + GC V+L+N+YA+AGR
Sbjct: 854 MIKKMPVKADVMIWGMLLSASRTHGNVEIAELAATELAAIDPSHGGCKVMLSNVYADAGR 913
Query: 648 WEDVEQIKLVMKKK 661
WEDV ++ M+ +
Sbjct: 914 WEDVALVREEMRTR 927
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 135/530 (25%), Positives = 235/530 (44%), Gaps = 68/530 (12%)
Query: 48 SETPKRGMIKPNSLSLTRSLCEFVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLF 107
+E+ R K +S S + +V S + +AL LF+ M + + +I+G++ +
Sbjct: 349 AESVFRDHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQW 408
Query: 108 QEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSL 167
E ++ + M GI ++ T VI AC L + + + IK+ L+ ++V +L
Sbjct: 409 SEAMELFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNL 468
Query: 168 IDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIG--------------------- 206
+ MY ++ A K+F+ MP R+LV+WN M+NGY G
Sbjct: 469 LHMYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWG 528
Query: 207 ---DGL-------KSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRN 256
DG ++L+ + EML G KP + M+ L + G ++H +++
Sbjct: 529 TMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKR 588
Query: 257 GLELDIMVQTSLIDMYA-------------------------------KCGKVDYAERVF 285
G + +Q ++I YA K G V+ A VF
Sbjct: 589 GFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVF 648
Query: 286 NEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLI-PDAITMINLLPSCSKFGTL 344
++ K+I +WNAMI GYA + + + M + + PDAITM+++ + S G+L
Sbjct: 649 DQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSL 708
Query: 345 LEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGR---INEKNMVSWNAII 401
EGK H Y P+ L A++DMY KCG ++ A +F + I+ + WNAII
Sbjct: 709 EEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAII 768
Query: 402 AAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQ-IHAYITKLEL 460
+G + AL+L+ L++ +KP+++T +L A V K + + +
Sbjct: 769 CGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGI 828
Query: 461 SSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFK-NLVSWNTMIMAYAIHG 509
+ +V + K G L+ A+ M K +++ W ++ A HG
Sbjct: 829 EPDIKHYGCMVDLLGKAGRLEEAKEMIKKMPVKADVMIWGMLLSASRTHG 878
Score = 138 bits (347), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 115/489 (23%), Positives = 206/489 (42%), Gaps = 108/489 (22%)
Query: 222 GEKPD-RLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDY 280
GE D +++S+LG C+ V G++IHC+V+++GL+ + + S+++MYAKC +
Sbjct: 289 GESSDTERALVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLAD 348
Query: 281 AERVFNE-------------------------------MTCKNIVAWNAMIGGYAINGHF 309
AE VF + M ++ V++ +I GYA N +
Sbjct: 349 AESVFRDHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQW 408
Query: 310 LESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETAL 369
E+ + M+ ++ + +T+ ++ +CS G + + + + AI+ + + T L
Sbjct: 409 SEAMELFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNL 468
Query: 370 VDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFH----------- 418
+ MY C LK A +F + E+N+V+WN ++ Y + G E+A ELF
Sbjct: 469 LHMYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWG 528
Query: 419 -----CLRNQTL---------------KPDAVTIASILPAYAELATVSECKQIHAYITKL 458
CLR L KP V + +L A A S+ Q+H I K
Sbjct: 529 TMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKR 588
Query: 459 ELSSNTFTSNAIVYMYA-------------------------------KCGDLQTARRYF 487
F I++ YA K G ++ AR F
Sbjct: 589 GFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVF 648
Query: 488 DSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRM-KQNGIEPNESTFVSLLSSCSISGLV 546
D K++ SWN MI YA +++ LF M + ++P+ T VS+ S+ S G +
Sbjct: 649 DQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSL 708
Query: 547 NEGWEL-----FNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARI- 600
EG F+++ + N+ I +D+ + G+++ A + + ++ I
Sbjct: 709 EEGKRAHDYLNFSTIPPNDNLTAAI------IDMYAKCGSIETALNIFHQTKNISSSTIS 762
Query: 601 -WGSLLTAS 608
W +++ S
Sbjct: 763 PWNAIICGS 771
Score = 129 bits (324), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 102/412 (24%), Positives = 185/412 (44%), Gaps = 54/412 (13%)
Query: 43 TKKQMSETPKRGMIKPNSLSLTRSLCEFVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFS 102
+K E P+R ++ N + L + +G ++ A LF+++ + D W +I G
Sbjct: 481 ARKLFDEMPERNLVTWNVM-----LNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCL 535
Query: 103 NKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLD---- 158
K E + +Y M G+ ++ A R + +G ++HG ++K G D
Sbjct: 536 RKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDF 595
Query: 159 ------------RDIYVC---------------NSLIDMYFKFGFVEVAEKVFEAMPLRD 191
DI + N+LI + K G VE A +VF+ +D
Sbjct: 596 LQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKD 655
Query: 192 LVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGE-KPDRLSMISSLGGCSIGCCVRGGKEIH 250
+ SWN M++GY +L F+EM+ + KPD ++M+S S + GK H
Sbjct: 656 IFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAH 715
Query: 251 CQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNE---MTCKNIVAWNAMIGGYAING 307
+ + + + + ++IDMYAKCG ++ A +F++ ++ I WNA+I G A +G
Sbjct: 716 DYLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHG 775
Query: 308 HFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCI-------HGYAIRKMFL 360
H + +Q + P++IT + +L +C G + GK HG
Sbjct: 776 HAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIE------ 829
Query: 361 PHLVLETALVDMYGKCGQLKFAECVFGRINEK-NMVSWNAIIAAYVQNGRNE 411
P + +VD+ GK G+L+ A+ + ++ K +++ W +++A +G E
Sbjct: 830 PDIKHYGCMVDLLGKAGRLEEAKEMIKKMPVKADVMIWGMLLSASRTHGNVE 881
>AT2G20540.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:8844160-8845764 FORWARD
Length = 534
Score = 289 bits (740), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 158/497 (31%), Positives = 273/497 (54%), Gaps = 36/497 (7%)
Query: 247 KEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAIN 306
K+I+ +I +GL + T ++D K +DYA R+FN+++ N+ +N++I Y N
Sbjct: 27 KKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHN 86
Query: 307 GHFLESFTCLKRMQEDNL-IPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLP--HL 363
+ + K++ + +PD T + SC+ G+ GK +HG+ + F P H+
Sbjct: 87 SLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCK--FGPRFHV 144
Query: 364 VLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQ 423
V E AL+DMY K L A VF + E++++SWN++++ Y + G+ ++A LFH + ++
Sbjct: 145 VTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDK 204
Query: 424 TL-------------------------------KPDAVTIASILPAYAELATVSECKQIH 452
T+ +PD +++ S+LP+ A+L ++ K IH
Sbjct: 205 TIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIH 264
Query: 453 AYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGT 512
Y + T NA++ MY+KCG + A + F M K+++SW+TMI YA HG
Sbjct: 265 LYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAH 324
Query: 513 ISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCM 572
+I+ F+ M++ ++PN TF+ LLS+CS G+ EG F+ M+ DY I+ IEHYGC+
Sbjct: 325 GAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCL 384
Query: 573 VDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTASRNNNDIFFAEFAAKHILSHDNDNT 632
+D+L R G L+ A + + MP+ P ++IWGSLL++ R ++ A A H++ + ++
Sbjct: 385 IDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEPEDM 444
Query: 633 GCYVLLANMYAEAGRWEDVEQIKLVMKKKGLAKTVDCCTVESKGKSQKFINNNKSHQQAY 692
G YVLLAN+YA+ G+WEDV +++ +++ + + KT +E Q+F++ + S
Sbjct: 445 GNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIEVNNIVQEFVSGDNSKPFWT 504
Query: 693 MIYDVLDIILKKIGEDV 709
I VL + +DV
Sbjct: 505 EISIVLQLFTSHQDQDV 521
Score = 178 bits (452), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 192/385 (49%), Gaps = 44/385 (11%)
Query: 36 RIRKSNPTKKQMSETPKRGMIKPNSLSLTRSLCEFVDS-GAMDNALYLFEKMNQPDTYIW 94
R++ N KK + G+ + +S +T+ + +F D MD A LF +++ P+ +++
Sbjct: 19 RVKSRNEWKKINASIIIHGLSQ-SSFMVTK-MVDFCDKIEDMDYATRLFNQVSNPNVFLY 76
Query: 95 NVIIRGFSNKGLFQEVIDFYHRMEYEGIGI-DNFTFPFVIKACGRLLSFIEGKKVHGKLI 153
N IIR +++ L+ +VI Y ++ + + D FTFPF+ K+C L S GK+VHG L
Sbjct: 77 NSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLC 136
Query: 154 KIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGD-----G 208
K G + N+LIDMY KF + A KVF+ M RD++SWN +++GY +G G
Sbjct: 137 KFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKG 196
Query: 209 LKSLMC--------------------------FKEMLGLGEKPDRLSMISSLGGCSIGCC 242
L LM F+EM G +PD +S+IS L C+
Sbjct: 197 LFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGS 256
Query: 243 VRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGG 302
+ GK IH R G V +LI+MY+KCG + A ++F +M K++++W+ MI G
Sbjct: 257 LELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISG 316
Query: 303 YAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEG-----KCIHGYAIRK 357
YA +G+ + MQ + P+ IT + LL +CS G EG Y I
Sbjct: 317 YAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIE- 375
Query: 358 MFLPHLVLETALVDMYGKCGQLKFA 382
P + L+D+ + G+L+ A
Sbjct: 376 ---PKIEHYGCLIDVLARAGKLERA 397
Score = 154 bits (390), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 100/365 (27%), Positives = 183/365 (50%), Gaps = 39/365 (10%)
Query: 117 MEYEGI-GIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFG 175
M + GI ++N+ PF+ R+ S E KK++ +I GL + ++ ++D K
Sbjct: 1 MAFHGIREVENYFIPFL----QRVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCDKIE 56
Query: 176 FVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLG-EKPDRLSMISSL 234
++ A ++F + ++ +N ++ Y + +K++L E PDR +
Sbjct: 57 DMDYATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMF 116
Query: 235 GGC-SIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNI 293
C S+G C G K++H + + G ++ + +LIDMY K + A +VF+EM +++
Sbjct: 117 KSCASLGSCYLG-KQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDV 175
Query: 294 VAWN-------------------------------AMIGGYAINGHFLESFTCLKRMQED 322
++WN AMI GY G ++E+ + MQ
Sbjct: 176 ISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLA 235
Query: 323 NLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFA 382
+ PD I++I++LPSC++ G+L GK IH YA R+ FL + AL++MY KCG + A
Sbjct: 236 GIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQA 295
Query: 383 ECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAEL 442
+FG++ K+++SW+ +I+ Y +G A+E F+ ++ +KP+ +T +L A + +
Sbjct: 296 IQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHV 355
Query: 443 ATVSE 447
E
Sbjct: 356 GMWQE 360
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 116/248 (46%), Gaps = 6/248 (2%)
Query: 45 KQMSETPKRGMIKPNSLSLTRSLCEFVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNK 104
K E +R +I NSL L + G M A LF M W +I G++
Sbjct: 165 KVFDEMYERDVISWNSL-----LSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGI 219
Query: 105 GLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVC 164
G + E +DF+ M+ GI D + V+ +C +L S GK +H + G + VC
Sbjct: 220 GCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVC 279
Query: 165 NSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEK 224
N+LI+MY K G + A ++F M +D++SW+ M++GY G+ ++ F EM K
Sbjct: 280 NALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVK 339
Query: 225 PDRLSMISSLGGCS-IGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAER 283
P+ ++ + L CS +G G + +E I LID+ A+ GK++ A
Sbjct: 340 PNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVE 399
Query: 284 VFNEMTCK 291
+ M K
Sbjct: 400 ITKTMPMK 407
>AT1G09190.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: shoot apex, sperm cell,
embryo, flower, seed; EXPRESSED DURING: petal
differentiation and expansion stage, D bilateral stage,
E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT5G56310.1); Has
12606 Blast hits to 4809 proteins in 101 species: Archae
- 0; Bacteria - 0; Metazoa - 13; Fungi - 33; Plants -
12368; Viruses - 0; Other Eukaryotes - 192 (source: NCBI
BLink). | chr1:2966263-2967717 REVERSE
Length = 484
Score = 288 bits (737), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 163/458 (35%), Positives = 247/458 (53%), Gaps = 33/458 (7%)
Query: 248 EIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAING 307
EIH ++R+ L ++ I + DYA RVF+ + N++ +NAMI Y++ G
Sbjct: 22 EIHAHLLRHFLHGSNLLLAHFISICGSLSNSDYANRVFSHIQNPNVLVFNAMIKCYSLVG 81
Query: 308 HFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLET 367
LES + M+ + D T LL SCS L GKC+HG IR F +
Sbjct: 82 PPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRI 141
Query: 368 ALVDMYGKCGQLKFAECVFGRINEKN-------------------------------MVS 396
+V++Y G++ A+ VF ++E+N +VS
Sbjct: 142 GVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVS 201
Query: 397 WNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYIT 456
WN++I++ + GR+ EALELF + +Q PD T+ ++LP A L + K IH+
Sbjct: 202 WNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAE 261
Query: 457 KLELSSNTFT-SNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISI 515
L + T NA+V Y K GDL+ A F M +N+VSWNT+I A++G G I
Sbjct: 262 SSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGI 321
Query: 516 QLFSRMKQNG-IEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVD 574
LF M + G + PNE+TF+ +L+ CS +G V G ELF M + ++ EHYG MVD
Sbjct: 322 DLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVD 381
Query: 575 LLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTASRNNNDIFFAEFAAKHILSHDNDNTGC 634
L+ R+G + A +F++ MP+ A +WGSLL+A R++ D+ AE AA ++ + N+G
Sbjct: 382 LMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSHGDVKLAEVAAMELVKIEPGNSGN 441
Query: 635 YVLLANMYAEAGRWEDVEQIKLVMKKKGLAKTVDCCTV 672
YVLL+N+YAE GRW+DVE+++ +MKK L K+ T+
Sbjct: 442 YVLLSNLYAEEGRWQDVEKVRTLMKKNRLRKSTGQSTI 479
Score = 133 bits (335), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 98/373 (26%), Positives = 172/373 (46%), Gaps = 38/373 (10%)
Query: 74 GAMDNALY---LFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFP 130
G++ N+ Y +F + P+ ++N +I+ +S G E + F+ M+ GI D +T+
Sbjct: 47 GSLSNSDYANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYA 106
Query: 131 FVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLR 190
++K+C L GK VHG+LI+ G R + ++++Y G + A+KVF+ M R
Sbjct: 107 PLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSER 166
Query: 191 DLVSWNCMVNGYRVIGDGLKSLMCFK-------------------------------EML 219
++V WN M+ G+ GD + L FK EM+
Sbjct: 167 NVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMI 226
Query: 220 GLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELD-IMVQTSLIDMYAKCGKV 278
G PD ++++ L + + GK IH +GL D I V +L+D Y K G +
Sbjct: 227 DQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDL 286
Query: 279 DYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRM-QEDNLIPDAITMINLLPS 337
+ A +F +M +N+V+WN +I G A+NG M +E + P+ T + +L
Sbjct: 287 EAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLAC 346
Query: 338 CSKFGTLLEGKCIHGYAIRKMFLPHLVLE-TALVDMYGKCGQLKFAECVFGRIN-EKNMV 395
CS G + G+ + G + + L A+VD+ + G++ A + N
Sbjct: 347 CSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAA 406
Query: 396 SWNAIIAAYVQNG 408
W ++++A +G
Sbjct: 407 MWGSLLSACRSHG 419
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 113/235 (48%), Gaps = 4/235 (1%)
Query: 70 FVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTF 129
F DSG ++ L+LF++M++ WN +I S G +E ++ + M +G D T
Sbjct: 178 FCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATV 237
Query: 130 PFVIKACGRLLSFIEGKKVHGKLIKIGLDRD-IYVCNSLIDMYFKFGFVEVAEKVFEAMP 188
V+ L GK +H GL +D I V N+L+D Y K G +E A +F M
Sbjct: 238 VTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQ 297
Query: 189 LRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGE-KPDRLSMISSLGGCSIGCCVRGGK 247
R++VSWN +++G V G G + F M+ G+ P+ + + L CS V G+
Sbjct: 298 RRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGE 357
Query: 248 EIHCQVI-RNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCK-NIVAWNAMI 300
E+ ++ R LE +++D+ ++ G++ A + M N W +++
Sbjct: 358 ELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLL 412
>AT3G04750.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:1301391-1303376 REVERSE
Length = 661
Score = 288 bits (737), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 163/505 (32%), Positives = 271/505 (53%), Gaps = 40/505 (7%)
Query: 225 PDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNG-LELDIMVQTSLIDMYAKCGKVDYAER 283
PDR + + + S V K+IHC +I +G L L + SL+ Y + G AE+
Sbjct: 131 PDRQTFLYLMKASSFLSEV---KQIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEK 187
Query: 284 VFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGT 343
VF M ++ ++N MI GYA G LE+ +M D + PD T+++LL C
Sbjct: 188 VFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSD 247
Query: 344 LLEGKCIHGYAIRK--MFLPHLVLETALVDMYGKC------------------------- 376
+ GK +HG+ R+ ++ +L+L AL+DMY KC
Sbjct: 248 IRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMV 307
Query: 377 ------GQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEAL-ELFHCLR-NQTLKPD 428
G ++ A+ VF ++ ++++VSWN+++ Y + G ++ + ELF+ + + +KPD
Sbjct: 308 VGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPD 367
Query: 429 AVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFD 488
VT+ S++ A +S + +H + +L+L + F S+A++ MY KCG ++ A F
Sbjct: 368 RVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFK 427
Query: 489 SMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNE 548
+ + K++ W +MI A HG G ++QLF RM++ G+ PN T +++L++CS SGLV E
Sbjct: 428 TATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEE 487
Query: 549 GWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIE-EMPLVPTARIWGSLLTA 607
G +FN MK + D EHYG +VDLL R G ++ AK ++ +MP+ P+ +WGS+L+A
Sbjct: 488 GLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSA 547
Query: 608 SRNNNDIFFAEFAAKHILSHDNDNTGCYVLLANMYAEAGRWEDVEQIKLVMKKKGLAKTV 667
R DI AE A +L + + G YVLL+N+YA GRW ++ + M+ +G+ KT
Sbjct: 548 CRGGEDIETAELALTELLKLEPEKEGGYVLLSNIYATVGRWGYSDKTREAMENRGVKKTA 607
Query: 668 DCCTVESKGKSQKFINNNKSHQQAY 692
+V +F+ K + +
Sbjct: 608 GYSSVVGVEGLHRFVAAEKQNHPRW 632
Score = 171 bits (433), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 119/434 (27%), Positives = 208/434 (47%), Gaps = 44/434 (10%)
Query: 89 PDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFI-EGKK 147
P+ +++N +I S+ E Y M + D TF +++KA SF+ E K+
Sbjct: 98 PNVFVYNTMISAVSSSK--NECFGLYSSMIRHRVSPDRQTFLYLMKAS----SFLSEVKQ 151
Query: 148 VHGKLIKIG-LDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIG 206
+H +I G L Y+ NSL+ Y + G VAEKVF MP D+ S+N M+ GY G
Sbjct: 152 IHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQG 211
Query: 207 DGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNG--LELDIMV 264
L++L + +M+ G +PD +++S L C +R GK +H + R G ++++
Sbjct: 212 FSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLIL 271
Query: 265 QTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNL 324
+L+DMY KC + A+R F+ M K++ +WN M+ G+ G + +M + +L
Sbjct: 272 SNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDL 331
Query: 325 I---------------------------------PDAITMINLLPSCSKFGTLLEGKCIH 351
+ PD +TM++L+ + G L G+ +H
Sbjct: 332 VSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVH 391
Query: 352 GYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNE 411
G IR L +AL+DMY KCG ++ A VF EK++ W ++I +G +
Sbjct: 392 GLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQ 451
Query: 412 EALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYIT-KLELSSNTFTSNAI 470
+AL+LF ++ + + P+ VT+ ++L A + V E + ++ K T ++
Sbjct: 452 QALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSL 511
Query: 471 VYMYAKCGDLQTAR 484
V + + G ++ A+
Sbjct: 512 VDLLCRAGRVEEAK 525
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 121/393 (30%), Positives = 197/393 (50%), Gaps = 40/393 (10%)
Query: 63 LTRSLCEF-VDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEG 121
L SL +F ++ G A +F +M PD +NV+I G++ +G E + Y +M +G
Sbjct: 168 LWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDG 227
Query: 122 IGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIG--LDRDIYVCNSLIDMYFK------ 173
I D +T ++ CG L GK VHG + + G ++ + N+L+DMYFK
Sbjct: 228 IEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGL 287
Query: 174 --------------------FGFV-----EVAEKVFEAMPLRDLVSWNCMVNGYRVIG-D 207
GFV E A+ VF+ MP RDLVSWN ++ GY G D
Sbjct: 288 AKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCD 347
Query: 208 GLKSLMCFKEMLGLGE-KPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQT 266
F EM + + KPDR++M+S + G + + G+ +H VIR L+ D + +
Sbjct: 348 QRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSS 407
Query: 267 SLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIP 326
+LIDMY KCG ++ A VF T K++ W +MI G A +G+ ++ RMQE+ + P
Sbjct: 408 ALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTP 467
Query: 327 DAITMINLLPSCSKFGTLLEGKCIHGYAIRKM-FLPHLVLETALVDMYGKCGQLKFAECV 385
+ +T++ +L +CS G + EG + + K F P +LVD+ + G+++ A+ +
Sbjct: 468 NNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDI 527
Query: 386 FGR--INEKNMVSWNAIIAAYVQNGRNEEALEL 416
+ + W +I++A + G + E EL
Sbjct: 528 VQKKMPMRPSQSMWGSILSA-CRGGEDIETAEL 559
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 120/252 (47%), Gaps = 8/252 (3%)
Query: 36 RIRKSNPTKKQMSETPKRGMIKPNSLSLTRSLCEFVDSGAMDNALYLFEKMNQPDTYIWN 95
+ ++S K+ K+ M N++ + FV G M+ A +F++M + D WN
Sbjct: 281 KCKESGLAKRAFDAMKKKDMRSWNTM-----VVGFVRLGDMEAAQAVFDQMPKRDLVSWN 335
Query: 96 VIIRGFSNKGLFQEVID--FYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLI 153
++ G+S KG Q + FY E + D T +I G+ VHG +I
Sbjct: 336 SLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVI 395
Query: 154 KIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLM 213
++ L D ++ ++LIDMY K G +E A VF+ +D+ W M+ G G+G ++L
Sbjct: 396 RLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQ 455
Query: 214 CFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVI-RNGLELDIMVQTSLIDMY 272
F M G P+ +++++ L CS V G + + + G + + SL+D+
Sbjct: 456 LFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLL 515
Query: 273 AKCGKVDYAERV 284
+ G+V+ A+ +
Sbjct: 516 CRAGRVEEAKDI 527
>AT1G50270.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:18622044-18623834 FORWARD
Length = 596
Score = 288 bits (736), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 148/456 (32%), Positives = 258/456 (56%), Gaps = 2/456 (0%)
Query: 248 EIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAING 307
+ H +++ GL+ D V+ SLI Y+ G D+A R+F+ K++V W AMI G+ NG
Sbjct: 124 QFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNG 183
Query: 308 HFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLP-HLVLE 366
E+ M++ + + +T++++L + K + G+ +HG + + + +
Sbjct: 184 SASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIG 243
Query: 367 TALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLK 426
++LVDMYGKC A+ VF + +N+V+W A+IA YVQ+ ++ + +F + +
Sbjct: 244 SSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVA 303
Query: 427 PDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRY 486
P+ T++S+L A A + + +++H Y+ K + NT ++ +Y KCG L+ A
Sbjct: 304 PNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILV 363
Query: 487 FDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLV 546
F+ + KN+ +W MI +A HG+ + LF M + + PNE TF+++LS+C+ GLV
Sbjct: 364 FERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLV 423
Query: 547 NEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLT 606
EG LF SMK +N++ +HY CMVDL GR G L+ AK IE MP+ PT +WG+L
Sbjct: 424 EEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFG 483
Query: 607 ASRNNNDIFFAEFAAKHILSHDNDNTGCYVLLANMYAEAGRWEDVEQIKLVMKKKGLAKT 666
+ + D ++AA ++ ++G Y LLAN+Y+E+ W++V +++ MK + + K+
Sbjct: 484 SCLLHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDEVARVRKQMKDQQVVKS 543
Query: 667 VDCCTVESKGKSQKFIN-NNKSHQQAYMIYDVLDII 701
+E KGK +FI ++K ++ +Y LD +
Sbjct: 544 PGFSWIEVKGKLCEFIAFDDKKPLESDDLYKTLDTV 579
Score = 201 bits (511), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 123/452 (27%), Positives = 230/452 (50%), Gaps = 8/452 (1%)
Query: 93 IWNVIIRGFSNKGLFQEVIDF--YHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHG 150
+W+ +I FS + F Y M G+ TFP ++KA +L + H
Sbjct: 69 LWDSLIGHFSGGITLNRRLSFLAYRHMRRNGVIPSRHTFPPLLKAVFKLRD-SNPFQFHA 127
Query: 151 KLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLK 210
++K GLD D +V NSLI Y G + A ++F+ +D+V+W M++G+ G +
Sbjct: 128 HIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASE 187
Query: 211 SLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNG-LELDIMVQTSLI 269
+++ F EM G + ++++S L VR G+ +H + G ++ D+ + +SL+
Sbjct: 188 AMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLV 247
Query: 270 DMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAI 329
DMY KC D A++VF+EM +N+V W A+I GY + F + + M + ++ P+
Sbjct: 248 DMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEK 307
Query: 330 TMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRI 389
T+ ++L +C+ G L G+ +H Y I+ + T L+D+Y KCG L+ A VF R+
Sbjct: 308 TLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERL 367
Query: 390 NEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECK 449
+EKN+ +W A+I + +G +A +LF+ + + + P+ VT ++L A A V E +
Sbjct: 368 HEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGR 427
Query: 450 QIHAYIT-KLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNL-VSWNTMIMAYAI 507
++ + + + +V ++ + G L+ A+ + M + V W + + +
Sbjct: 428 RLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLL 487
Query: 508 HGFGTISIQLFSRMKQNGIEPNESTFVSLLSS 539
H + SR+ + ++P+ S +LL++
Sbjct: 488 HKDYELGKYAASRVIK--LQPSHSGRYTLLAN 517
Score = 176 bits (446), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 102/345 (29%), Positives = 178/345 (51%), Gaps = 19/345 (5%)
Query: 70 FVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTF 129
+ SG D A LF+ D W +I GF G E + ++ M+ G+ + T
Sbjct: 148 YSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTV 207
Query: 130 PFVIKACGRLLSFIEGKKVHGKLIKIGLDR-DIYVCNSLIDMYFKFGFVEVAEKVFEAMP 188
V+KA G++ G+ VHG ++ G + D+++ +SL+DMY K + A+KVF+ MP
Sbjct: 208 VSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMP 267
Query: 189 LRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKE 248
R++V+W ++ GY K ++ F+EML P+ ++ S L C+ + G+
Sbjct: 268 SRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRR 327
Query: 249 IHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGH 308
+HC +I+N +E++ T+LID+Y KCG ++ A VF + KN+ W AMI G+A +G+
Sbjct: 328 VHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGY 387
Query: 309 FLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFL-------- 360
++F M ++ P+ +T + +L +C+ G + EG R++FL
Sbjct: 388 ARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEG--------RRLFLSMKGRFNM 439
Query: 361 -PHLVLETALVDMYGKCGQLKFAECVFGRIN-EKNMVSWNAIIAA 403
P +VD++G+ G L+ A+ + R+ E V W A+ +
Sbjct: 440 EPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGS 484
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 97/429 (22%), Positives = 193/429 (44%), Gaps = 24/429 (5%)
Query: 247 KEIHCQVIRNGL---ELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMI--- 300
K+IHC ++ + + D+ + L + YA R+ ++ +I W+++I
Sbjct: 18 KQIHCLLLTSPIFYTRRDLFLSRLLRRCCTAATQFRYARRLLCQLQTLSIQLWDSLIGHF 77
Query: 301 -GGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMF 359
GG +N SF + M+ + +IP T LL + K + H + ++
Sbjct: 78 SGGITLNRRL--SFLAYRHMRRNGVIPSRHTFPPLLKAVFKLRDSNPFQ-FHAHIVKFGL 134
Query: 360 LPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHC 419
+ +L+ Y G FA +F +K++V+W A+I +V+NG EA+ F
Sbjct: 135 DSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVE 194
Query: 420 LRNQTLKPDAVTIASILPAYAELATVSECKQIHA-YITKLELSSNTFTSNAIVYMYAKCG 478
++ + + +T+ S+L A ++ V + +H Y+ + + F +++V MY KC
Sbjct: 195 MKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCS 254
Query: 479 DLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLS 538
A++ FD M +N+V+W +I Y + +F M ++ + PNE T S+LS
Sbjct: 255 CYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLS 314
Query: 539 SCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTA 598
+C+ G ++ G + M + +I+ ++DL + G L+ A E +
Sbjct: 315 ACAHVGALHRGRRVHCYM-IKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLH-EKNV 372
Query: 599 RIWGSLLTA------SRNNNDIFFAEFAAKHILSHDNDNTGCYVLLANMYAEAGRWEDVE 652
W +++ +R+ D+F+ + SH + N ++ + + A G E+
Sbjct: 373 YTWTAMINGFAAHGYARDAFDLFYTMLS-----SHVSPNEVTFMAVLSACAHGGLVEEGR 427
Query: 653 QIKLVMKKK 661
++ L MK +
Sbjct: 428 RLFLSMKGR 436
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 73/147 (49%), Gaps = 6/147 (4%)
Query: 56 IKPNSLSLTRSLCEFVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYH 115
I+ N+ + T + +V G ++ A+ +FE++++ + Y W +I GF+ G ++ D ++
Sbjct: 337 IEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFY 396
Query: 116 RMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKL---IKIGLDRDIYVCNSLIDMYF 172
M + + TF V+ AC EG+++ + + D Y C ++D++
Sbjct: 397 TMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYAC--MVDLFG 454
Query: 173 KFGFVEVAEKVFEAMPLRDL-VSWNCM 198
+ G +E A+ + E MP+ V W +
Sbjct: 455 RKGLLEEAKALIERMPMEPTNVVWGAL 481
>AT5G50990.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 6 plant
structures; EXPRESSED DURING: F mature embryo stage,
petal differentiation and expansion stage, D bilateral
stage, E expanded cotyledon stage; CONTAINS InterPro
DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885);
BEST Arabidopsis thaliana protein match is: binding
(TAIR:AT3G62890.1); Has 13116 Blast hits to 4886
proteins in 160 species: Archae - 0; Bacteria - 0;
Metazoa - 67; Fungi - 72; Plants - 12769; Viruses - 0;
Other Eukaryotes - 208 (source: NCBI BLink). |
chr5:20739453-20741281 FORWARD
Length = 534
Score = 288 bits (736), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 161/462 (34%), Positives = 258/462 (55%), Gaps = 12/462 (2%)
Query: 348 KCIHGYAIRKMFLPHLVLETA------LVDMYGKCGQLKFAECVFGRINEKNMVSWNAII 401
+C Y R++ L L L +++ K G+ A+ V +++N+++WN +I
Sbjct: 77 RCNRSYLARRLLLWFLSLSPGVCNINLIIESLMKIGESGLAKKVLRNASDQNVITWNLMI 136
Query: 402 AAYVQNGRNEEALE-LFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLEL 460
YV+N + EEAL+ L + L +KP+ + AS L A A L + K +H+ + +
Sbjct: 137 GGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGI 196
Query: 461 SSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSR 520
N S+A+V +YAKCGD+ T+R F S+ ++ WN MI +A HG T +I++FS
Sbjct: 197 ELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSE 256
Query: 521 MKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTG 580
M+ + P+ TF+ LL++CS GL+ EG E F M ++I +EHYG MVDLLGR G
Sbjct: 257 MEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAG 316
Query: 581 NLDAAKQFIEEMPLVPTARIWGSLLTASRNNNDIFFAEFAAKHILSHDNDNTGCYVLLAN 640
+ A + IE MP+ P IW SLL++SR + E A +++ +G YVLL+N
Sbjct: 317 RVKEAYELIESMPIEPDVVIWRSLLSSSRTYKNPELGEIAIQNL---SKAKSGDYVLLSN 373
Query: 641 MYAEAGRWEDVEQIKLVMKKKGLAKTVDCCTVESKGKSQKFINNNKSHQQAYMIYDVLDI 700
+Y+ +WE ++++ +M K+G+ K +E G +F + SH + IY VL+
Sbjct: 374 IYSSTKKWESAQKVRELMSKEGIRKAKGKSWLEFGGMIHRFKAGDTSHIETKAIYKVLEG 433
Query: 701 ILKKIGEDVYIHSLSKFRPADVIKKKMKSPQN-HSVKLAICFGLISTAIGKPIIIRKNTR 759
+++K ++ S + DV +++ + N HS KLA+ + ++ ++ G I I+KN R
Sbjct: 434 LIQKTKSQGFV-SDTDLVLMDVSEEEKEENLNYHSEKLALAYVILKSSPGTEIRIQKNIR 492
Query: 760 ICKDCHIAAKKISRVTKREIIVGDSKIFHHFEDGRCSCGDYW 801
+C DCH K +S++ R II+ D FH FEDG CSC DYW
Sbjct: 493 MCSDCHNWIKAVSKLLNRVIIMRDRIRFHRFEDGLCSCRDYW 534
Score = 132 bits (332), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 76/242 (31%), Positives = 134/242 (55%), Gaps = 3/242 (1%)
Query: 165 NSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGE- 223
N +I+ K G +A+KV +++++WN M+ GY ++L K ML +
Sbjct: 102 NLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDI 161
Query: 224 KPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAER 283
KP++ S SSL C+ + K +H +I +G+EL+ ++ ++L+D+YAKCG + +
Sbjct: 162 KPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSRE 221
Query: 284 VFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGT 343
VF + ++ WNAMI G+A +G E+ M+ +++ PD+IT + LL +CS G
Sbjct: 222 VFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGL 281
Query: 344 LLEGKCIHGYAIRKMFL-PHLVLETALVDMYGKCGQLKFA-ECVFGRINEKNMVSWNAII 401
L EGK G R+ + P L A+VD+ G+ G++K A E + E ++V W +++
Sbjct: 282 LEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLL 341
Query: 402 AA 403
++
Sbjct: 342 SS 343
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 128/261 (49%), Gaps = 6/261 (2%)
Query: 268 LIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQE-DNLIP 326
+I+ K G+ A++V + +N++ WN MIGGY N + E+ LK M ++ P
Sbjct: 104 IIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKP 163
Query: 327 DAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVF 386
+ + + L +C++ G L K +H I + +L +ALVD+Y KCG + + VF
Sbjct: 164 NKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVF 223
Query: 387 GRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVS 446
+ ++ WNA+I + +G EA+ +F + + + PD++T +L + +
Sbjct: 224 YSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLE 283
Query: 447 ECKQIHAYIT-KLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFK-NLVSWNTMIMA 504
E K+ ++ + + A+V + + G ++ A +SM + ++V W +++ +
Sbjct: 284 EGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSS 343
Query: 505 ---YAIHGFGTISIQLFSRMK 522
Y G I+IQ S+ K
Sbjct: 344 SRTYKNPELGEIAIQNLSKAK 364
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 111/241 (46%), Gaps = 6/241 (2%)
Query: 63 LTRSLCEFVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRM-EYEG 121
+ SL + +SG L + + WN++I G+ ++E + M +
Sbjct: 104 IIESLMKIGESGLAKKVL---RNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTD 160
Query: 122 IGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAE 181
I + F+F + AC RL K VH +I G++ + + ++L+D+Y K G + +
Sbjct: 161 IKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSR 220
Query: 182 KVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGC 241
+VF ++ D+ WN M+ G+ G +++ F EM PD ++ + L CS
Sbjct: 221 EVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCG 280
Query: 242 CVRGGKEIHCQVIRN-GLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCK-NIVAWNAM 299
+ GKE + R ++ + +++D+ + G+V A + M + ++V W ++
Sbjct: 281 LLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSL 340
Query: 300 I 300
+
Sbjct: 341 L 341
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 67/137 (48%), Gaps = 2/137 (1%)
Query: 70 FVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTF 129
+ G + + +F + + D IWN +I GF+ GL E I + ME E + D+ TF
Sbjct: 210 YAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITF 269
Query: 130 PFVIKACGRLLSFIEGKKVHGKLI-KIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMP 188
++ C EGK+ G + + + + +++D+ + G V+ A ++ E+MP
Sbjct: 270 LGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMP 329
Query: 189 LR-DLVSWNCMVNGYRV 204
+ D+V W +++ R
Sbjct: 330 IEPDVVIWRSLLSSSRT 346
>AT3G50420.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:18710871-18713649 REVERSE
Length = 794
Score = 285 bits (728), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 182/627 (29%), Positives = 323/627 (51%), Gaps = 22/627 (3%)
Query: 70 FVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFS-NKGLFQEVIDFYHRMEYEGIGIDNFT 128
+V G+++ A +F+KM + +N + +S N M +E + ++ T
Sbjct: 142 YVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSST 201
Query: 129 FPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMP 188
F +++ C L + G ++ ++IK+G ++ V S++ MY G +E A ++F+ +
Sbjct: 202 FTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVN 261
Query: 189 LRDLVSWNCMVNGY---RVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRG 245
RD V+WN M+ G I DGL M F+ ML G P + + L GCS
Sbjct: 262 NRDAVAWNTMIVGSLKNDKIEDGL---MFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSL 318
Query: 246 GKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAI 305
GK IH ++I + D+ + +L+DMY CG + A VF + N+V+WN++I G +
Sbjct: 319 GKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSE 378
Query: 306 NGHFLESFTCLKRM-QEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLV 364
NG ++ +R+ + PD T + + ++ + GK +HG + + +
Sbjct: 379 NGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVF 438
Query: 365 LETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQT 424
+ T L+ MY K + + A+ VF + E+++V W +I + + G +E A++ F + +
Sbjct: 439 VGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREK 498
Query: 425 LKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTAR 484
+ D +++S++ A +++A + + + H + A+V MY K G +TA
Sbjct: 499 NRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAE 558
Query: 485 RYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISG 544
F S +L WN+M+ AY+ HG ++ F ++ +NG P+ T++SLL++CS G
Sbjct: 559 TIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRG 618
Query: 545 LVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVP---TARIW 601
+G L+N MK + I G +HY CMV+L+ + G +D A + IE+ P P A +W
Sbjct: 619 STLQGKFLWNQMK-EQGIKAGFKHYSCMVNLVSKAGLVDEALELIEQSP--PGNNQAELW 675
Query: 602 GSLLTASRNNNDIFFAEFAAKHILSHDNDNTGCYVLLANMYAEAGRWEDVEQIKLVMKKK 661
+LL+A N ++ +AA+ IL D ++T ++LL+N+YA GRWEDV +++ K +
Sbjct: 676 RTLLSACVNTRNLQIGLYAAEQILKLDPEDTATHILLSNLYAVNGRWEDVAEMR--RKIR 733
Query: 662 GLAKTVDCCTVESKGKSQKFINNNKSH 688
GLA + D G S +NNN +
Sbjct: 734 GLASSKD------PGLSWIEVNNNNTQ 754
Score = 229 bits (584), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 156/561 (27%), Positives = 275/561 (49%), Gaps = 37/561 (6%)
Query: 70 FVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTF 129
+V +++ A +F+KM Q + I+ F +F E + + + I + +F
Sbjct: 32 YVRCSSLEQARKVFDKMPQRN------IVTLFGLSAVF-EYVSMGSSLHSQIIKLGSFQM 84
Query: 130 PF-------------VIKACGRLLSFIEGKKVHGKLIKIGL---DRDIYVCNSLIDMYFK 173
F + + C + +++H ++ G Y N+LI MY +
Sbjct: 85 IFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVR 144
Query: 174 FGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGD------GLKSLMCFKEMLGLGEKPDR 227
G +E A KVF+ MP R++VS+N + + Y D L + M F+ + KP+
Sbjct: 145 CGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYV-----KPNS 199
Query: 228 LSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNE 287
+ S + C++ V G ++ Q+I+ G +++VQTS++ MY+ CG ++ A R+F+
Sbjct: 200 STFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDC 259
Query: 288 MTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEG 347
+ ++ VAWN MI G N + + M + P T +L CSK G+ G
Sbjct: 260 VNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLG 319
Query: 348 KCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQN 407
K IH I L L L+ AL+DMY CG ++ A VFGRI+ N+VSWN+II+ +N
Sbjct: 320 KLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSEN 379
Query: 408 GRNEEALELF-HCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFT 466
G E+A+ ++ LR T +PD T ++ + A AE K +H +TKL + F
Sbjct: 380 GFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFV 439
Query: 467 SNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGI 526
++ MY K + ++A++ FD M +++V W MI+ ++ G +++Q F M +
Sbjct: 440 GTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKN 499
Query: 527 EPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAK 586
+ + S++ +CS ++ +G E+F+ + + D + G +VD+ G+ G + A+
Sbjct: 500 RSDGFSLSSVIGACSDMAMLRQG-EVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAE 558
Query: 587 QFIEEMPLVPTARIWGSLLTA 607
I + P + W S+L A
Sbjct: 559 T-IFSLASNPDLKCWNSMLGA 578
Score = 180 bits (456), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 123/441 (27%), Positives = 218/441 (49%), Gaps = 14/441 (3%)
Query: 2 AVKLSHSYFFNSYKPDDASFK---QMGAPKRDLLVNPRIRKSNPTKKQMSETPKRGMIKP 58
A L+ F KP+ ++F Q+ A D+L+ + S+ K G
Sbjct: 183 AFPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDVLMGSSLN---------SQIIKLG-YSD 232
Query: 59 NSLSLTRSLCEFVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRME 118
N + T L + G +++A +F+ +N D WN +I G ++ + F+ M
Sbjct: 233 NVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNML 292
Query: 119 YEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVE 178
G+ FT+ V+ C +L S+ GK +H ++I D+ + N+L+DMY G +
Sbjct: 293 MSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMR 352
Query: 179 VAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLG-EKPDRLSMISSLGGC 237
A VF + +LVSWN +++G G G ++++ ++ +L + +PD + +++
Sbjct: 353 EAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISAT 412
Query: 238 SIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWN 297
+ GK +H QV + G E + V T+L+ MY K + + A++VF+ M +++V W
Sbjct: 413 AEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWT 472
Query: 298 AMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRK 357
MI G++ G+ + M + D ++ +++ +CS L +G+ H AIR
Sbjct: 473 EMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRT 532
Query: 358 MFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELF 417
F + + ALVDMYGK G+ + AE +F + ++ WN+++ AY Q+G E+AL F
Sbjct: 533 GFDCVMSVCGALVDMYGKNGKYETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFF 592
Query: 418 HCLRNQTLKPDAVTIASILPA 438
+ PDAVT S+L A
Sbjct: 593 EQILENGFMPDAVTYLSLLAA 613
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 107/391 (27%), Positives = 201/391 (51%), Gaps = 11/391 (2%)
Query: 162 YVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCM--VNGYRVIGDGLKS----LMCF 215
Y N+LI MY + +E A KVF+ MP R++V+ + V Y +G L S L F
Sbjct: 23 YANNNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGSF 82
Query: 216 KEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDI---MVQTSLIDMY 272
+ + + S++ C ++ ++IH V+ G +LI MY
Sbjct: 83 QMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMY 142
Query: 273 AKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLE-SFTCLKRMQEDNLIPDAITM 331
+CG ++ A +VF++M +N+V++NA+ Y+ N F +F M + + P++ T
Sbjct: 143 VRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTF 202
Query: 332 INLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINE 391
+L+ C+ +L G ++ I+ + ++V++T+++ MY CG L+ A +F +N
Sbjct: 203 TSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNN 262
Query: 392 KNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQI 451
++ V+WN +I ++N + E+ L F + + P T + +L ++L + S K I
Sbjct: 263 RDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLI 322
Query: 452 HAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFG 511
HA I + ++ NA++ MY CGD++ A F + NLVSWN++I + +GFG
Sbjct: 323 HARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFG 382
Query: 512 TISIQLFSR-MKQNGIEPNESTFVSLLSSCS 541
++ ++ R ++ + P+E TF + +S+ +
Sbjct: 383 EQAMLMYRRLLRMSTPRPDEYTFSAAISATA 413
>AT1G31430.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11254025-11255737 REVERSE
Length = 570
Score = 284 bits (727), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 170/511 (33%), Positives = 273/511 (53%), Gaps = 42/511 (8%)
Query: 210 KSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLI 269
K L F E+ G G PD ++ L V G+++H ++ GLE D V SL+
Sbjct: 29 KVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAVKAGLEFDSYVSNSLM 88
Query: 270 DMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRM-QEDNLIPDA 328
MYA GK++ +VF+EM +++V+WN +I Y NG F ++ KRM QE NL D
Sbjct: 89 GMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDE 148
Query: 329 ITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVF-- 386
T+++ L +CS L G+ I+ + + + F + + ALVDM+ KCG L A VF
Sbjct: 149 GTIVSTLSACSALKNLEIGERIYRFVVTE-FEMSVRIGNALVDMFCKCGCLDKARAVFDS 207
Query: 387 -------------------GRINE----------KNMVSWNAIIAAYVQNGRNEEALELF 417
GRI+E K++V W A++ YVQ R +EALELF
Sbjct: 208 MRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELF 267
Query: 418 HCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKC 477
C++ ++PD + S+L A+ + + K IH YI + ++ + A+V MYAKC
Sbjct: 268 RCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKC 327
Query: 478 GDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLL 537
G ++TA F + ++ SW ++I A++G ++ L+ M+ G+ + TFV++L
Sbjct: 328 GCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVL 387
Query: 538 SSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEM----- 592
++C+ G V EG ++F+SM +N+ EH C++DLL R G LD A++ I++M
Sbjct: 388 TACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKMRGESD 447
Query: 593 -PLVPTARIWGSLLTASRNNNDIFFAEFAAKHILSHDNDNTGCYVLLANMYAEAGRWEDV 651
LVP ++ SLL+A+RN ++ AE A+ + + ++ + LLA++YA A RWEDV
Sbjct: 448 ETLVP---VYCSLLSAARNYGNVKIAERVAEKLEKVEVSDSSAHTLLASVYASANRWEDV 504
Query: 652 EQIKLVMKKKGLAKTVDCCTVESKGKSQKFI 682
++ MK G+ K C ++E G +FI
Sbjct: 505 TNVRRKMKDLGIRKFPGCSSIEIDGVGHEFI 535
Score = 232 bits (592), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 155/525 (29%), Positives = 256/525 (48%), Gaps = 47/525 (8%)
Query: 86 MNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEG 145
+ P ++N +++ ++ F +V+ + + +G+ DNFT P V+K+ GRL IEG
Sbjct: 6 LQTPSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEG 65
Query: 146 KKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVI 205
+KVHG +K GL+ D YV NSL+ MY G +E+ KVF+ MP RD+VSWN +++ Y
Sbjct: 66 EKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGN 125
Query: 206 GDGLKSLMCFKEMLGLGE-KPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMV 264
G ++ FK M K D +++S+L CS + G+ I+ V+ E+ + +
Sbjct: 126 GRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTE-FEMSVRI 184
Query: 265 QTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAING----------------- 307
+L+DM+ KCG +D A VF+ M KN+ W +M+ GY G
Sbjct: 185 GNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDV 244
Query: 308 --------------HFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGY 353
F E+ + MQ + PD +++LL C++ G L +GK IHGY
Sbjct: 245 VLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGY 304
Query: 354 AIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEA 413
V+ TALVDMY KCG ++ A VF I E++ SW ++I NG + A
Sbjct: 305 INENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRA 364
Query: 414 LELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQI-HAYITKLELSSNTFTSNAIVY 472
L+L++ + N ++ DA+T ++L A V+E ++I H+ + + + + ++
Sbjct: 365 LDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLID 424
Query: 473 MYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAY-----AIHGFGTISIQLFSRMKQNGIE 527
+ + G L A D M + S T++ Y A +G + I K +E
Sbjct: 425 LLCRAGLLDEAEELIDKMRGE---SDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVE 481
Query: 528 PNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHY-GC 571
++S+ +LL+S S WE +++ D GI + GC
Sbjct: 482 VSDSSAHTLLASVYASA---NRWEDVTNVRRKMK-DLGIRKFPGC 522
Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 113/447 (25%), Positives = 198/447 (44%), Gaps = 67/447 (14%)
Query: 82 LFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEG-IGIDNFTFPFVIKACGRLL 140
+F++M Q D WN +I + G F++ I + RM E + D T + AC L
Sbjct: 103 VFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALK 162
Query: 141 SFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAM------------- 187
+ G++++ + + + + + N+L+DM+ K G ++ A VF++M
Sbjct: 163 NLEIGERIY-RFVVTEFEMSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVF 221
Query: 188 ------------------PLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLS 229
P++D+V W M+NGY ++L F+ M G +PD
Sbjct: 222 GYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFV 281
Query: 230 MISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMT 289
++S L GC+ + GK IH + N + +D +V T+L+DMYAKCG ++ A VF E+
Sbjct: 282 LVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIK 341
Query: 290 CKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKC 349
++ +W ++I G A+NG + M+ + DAIT + +L +C+ G + EG+
Sbjct: 342 ERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRK 401
Query: 350 I-HGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNG 408
I H R P + L+D+ + G L AE + ++ G
Sbjct: 402 IFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKM-----------------RG 444
Query: 409 RNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELS-SNTFTS 467
++E L +C S+L A V +++ + K+E+S S+ T
Sbjct: 445 ESDETLVPVYC--------------SLLSAARNYGNVKIAERVAEKLEKVEVSDSSAHTL 490
Query: 468 NAIVYMYA-KCGDLQTARRYFDSMSFK 493
A VY A + D+ RR + +
Sbjct: 491 LASVYASANRWEDVTNVRRKMKDLGIR 517
Score = 106 bits (265), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 113/220 (51%), Gaps = 1/220 (0%)
Query: 70 FVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTF 129
+V +G +D A LFE+ D +W ++ G+ F E ++ + M+ GI DNF
Sbjct: 223 YVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVL 282
Query: 130 PFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPL 189
++ C + + +GK +HG + + + D V +L+DMY K G +E A +VF +
Sbjct: 283 VSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKE 342
Query: 190 RDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEI 249
RD SW ++ G + G ++L + EM +G + D ++ ++ L C+ G V G++I
Sbjct: 343 RDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKI 402
Query: 250 -HCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEM 288
H R+ ++ + LID+ + G +D AE + ++M
Sbjct: 403 FHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKM 442
>AT2G46050.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:18939262-18941034 FORWARD
Length = 590
Score = 282 bits (722), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 168/524 (32%), Positives = 276/524 (52%), Gaps = 17/524 (3%)
Query: 146 KKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVI 205
K+ HG ++K G+ +++ N L+ Y K + A+K+F+ MPLR++V+WN +++G +
Sbjct: 56 KQEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGV-IQ 114
Query: 206 GDGLKSL-----MCF-KEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLE 259
DG + C+ +L D +S + + C+ ++ G ++HC +++ GLE
Sbjct: 115 RDGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLE 174
Query: 260 LDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRM 319
TSL+ Y KCG + A RVF + +++V WNA++ Y +NG E+F LK M
Sbjct: 175 SSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLM 234
Query: 320 QED--NLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCG 377
D D T +LL +C + +GK IH + + + + TAL++MY K
Sbjct: 235 GSDKNRFRGDYFTFSSLLSACR----IEQGKQIHAILFKVSYQFDIPVATALLNMYAKSN 290
Query: 378 QLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILP 437
L A F + +N+VSWNA+I + QNG EA+ LF + + L+PD +T AS+L
Sbjct: 291 HLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLS 350
Query: 438 AYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVS 497
+ A+ + + E KQ+ A +TK + +N+++ Y++ G+L A F S+ +LVS
Sbjct: 351 SCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLVS 410
Query: 498 WNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMK 557
W ++I A A HGF S+Q+F M Q ++P++ TF+ +LS+CS GLV EG F M
Sbjct: 411 WTSVIGALASHGFAEESLQMFESMLQK-LQPDKITFLEVLSACSHGGLVQEGLRCFKRMT 469
Query: 558 MDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTASRNNNDIFFA 617
Y I+ EHY C++DLLGR G +D A + MP P+ + +
Sbjct: 470 EFYKIEAEDEHYTCLIDLLGRAGFIDEASDVLNSMPTEPSTHALAAFTGGCNIHEKRESM 529
Query: 618 EFAAKHILSHDNDNTGCYVLLANMYAEAGRWEDVEQIKLVMKKK 661
++ AK +L + Y +L+N Y G W Q L+ K++
Sbjct: 530 KWGAKKLLEIEPTKPVNYSILSNAYVSEGHW---NQAALLRKRE 570
Score = 188 bits (477), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 130/449 (28%), Positives = 215/449 (47%), Gaps = 30/449 (6%)
Query: 59 NSLSLTRSLCE-FVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRM 117
NSL L L + + D+A LF++M + WN++I G + Q D HR
Sbjct: 69 NSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHG-----VIQRDGDTNHRA 123
Query: 118 E----------YEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSL 167
+ + +D+ +F +I+ C + G ++H ++K GL+ + SL
Sbjct: 124 HLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSL 183
Query: 168 IDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGE---K 224
+ Y K G + A +VFEA+ RDLV WN +V+ Y V+ + +++G + +
Sbjct: 184 VHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSY-VLNGMIDEAFGLLKLMGSDKNRFR 242
Query: 225 PDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERV 284
D + S L C I GK+IH + + + DI V T+L++MYAK + A
Sbjct: 243 GDYFTFSSLLSACRI----EQGKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDAREC 298
Query: 285 FNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTL 344
F M +N+V+WNAMI G+A NG E+ +M +NL PD +T ++L SC+KF +
Sbjct: 299 FESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAI 358
Query: 345 LEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAY 404
E K + +K L + +L+ Y + G L A F I E ++VSW ++I A
Sbjct: 359 WEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGAL 418
Query: 405 VQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSE---CKQIHAYITKLELS 461
+G EE+L++F + Q L+PD +T +L A + V E C + K+E
Sbjct: 419 ASHGFAEESLQMFESML-QKLQPDKITFLEVLSACSHGGLVQEGLRCFKRMTEFYKIEAE 477
Query: 462 SNTFTSNAIVYMYAKCGDLQTARRYFDSM 490
+T ++ + + G + A +SM
Sbjct: 478 DEHYT--CLIDLLGRAGFIDEASDVLNSM 504
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 104/231 (45%), Gaps = 18/231 (7%)
Query: 440 AELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWN 499
A L +S+ KQ H ++ K + ++ F N ++ Y K + A + FD M +N+V+WN
Sbjct: 47 ASLDHLSDVKQEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWN 106
Query: 500 TMIMAY----------AIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEG 549
+I A GF +S LF+ + + + +F+ L+ C+ S + G
Sbjct: 107 ILIHGVIQRDGDTNHRAHLGFCYLSRILFTDVSLDHV-----SFMGLIRLCTDSTNMKAG 161
Query: 550 WELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTASR 609
+L + + + ++ +V G+ G + A++ E + L +W +L+++
Sbjct: 162 IQL-HCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAV-LDRDLVLWNALVSSYV 219
Query: 610 NNNDIFFAEFAAKHILSHDNDNTGCYVLLANMYAEAGRWEDVEQIKLVMKK 660
N I A K + S N G Y +++ + A R E +QI ++ K
Sbjct: 220 LNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLS-ACRIEQGKQIHAILFK 269
>AT5G59600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:24011315-24012919 REVERSE
Length = 534
Score = 281 bits (719), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 180/527 (34%), Positives = 270/527 (51%), Gaps = 45/527 (8%)
Query: 132 VIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRD 191
+I+A GR F G+ +H L+ G+ R + L+ Y + G V A KVF+ MP RD
Sbjct: 22 LIEANGRDRLFCRGRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMPKRD 81
Query: 192 LVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRG-GKEIH 250
+ M+ G +SL F+EM G K D ++ SL S R GK IH
Sbjct: 82 ISGCVVMIGACARNGYYQESLDFFREMYKDGLKLDAF-IVPSLLKASRNLLDREFGKMIH 140
Query: 251 CQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFL 310
C V++ E D + +SLIDMY+K G+V A +VF+++ +++V +NAMI GYA N
Sbjct: 141 CLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQAD 200
Query: 311 ESFTCLKRMQEDNLIPDAITMINLLPSCS------KFGTLLEGKCIHGYAIRKMFLPHLV 364
E+ +K M+ + PD IT L+ S K +LE C+ GY
Sbjct: 201 EALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGY----------- 249
Query: 365 LETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQT 424
+ ++VSW +II+ V N +NE+A + F +
Sbjct: 250 --------------------------KPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHG 283
Query: 425 LKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTAR 484
L P++ TI ++LPA LA + K+IH Y L + F +A++ MY KCG + A
Sbjct: 284 LYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAM 343
Query: 485 RYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISG 544
F K V++N+MI YA HG +++LF +M+ G + + TF ++L++CS +G
Sbjct: 344 ILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAG 403
Query: 545 LVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSL 604
L + G LF M+ Y I +EHY CMVDLLGR G L A + I+ M + P +WG+L
Sbjct: 404 LTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRMEPDLFVWGAL 463
Query: 605 LTASRNNNDIFFAEFAAKHILSHDNDNTGCYVLLANMYAEAGRWEDV 651
L A RN+ ++ A AAKH+ + +N+G +LL ++YA AG WE V
Sbjct: 464 LAACRNHGNMELARIAAKHLAELEPENSGNGLLLTSLYANAGSWESV 510
Score = 175 bits (444), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 130/472 (27%), Positives = 226/472 (47%), Gaps = 35/472 (7%)
Query: 70 FVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTF 129
+V+ G + +A +F++M + D V+I + G +QE +DF+ M +G+ +D F
Sbjct: 61 YVECGKVLDARKVFDEMPKRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLDAFIV 120
Query: 130 PFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPL 189
P ++KA LL GK +H ++K + D ++ +SLIDMY KFG V A KVF +
Sbjct: 121 PSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGE 180
Query: 190 RDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEI 249
+DLV +N M++GY ++L K+M LG KPD ++ + + G S
Sbjct: 181 QDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFS----------- 229
Query: 250 HCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHF 309
H +RN ++ +++ +D Y ++V+W ++I G N
Sbjct: 230 H---MRNEEKVSEILELMCLDGYK-----------------PDVVSWTSIISGLVHNFQN 269
Query: 310 LESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETAL 369
++F K+M L P++ T+I LLP+C+ + GK IHGY++ H + +AL
Sbjct: 270 EKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSAL 329
Query: 370 VDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDA 429
+DMYGKCG + A +F + +K V++N++I Y +G ++A+ELF + K D
Sbjct: 330 LDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDH 389
Query: 430 VTIASILPAYAELATVSECKQIHAYI-TKLELSSNTFTSNAIVYMYAKCGDLQTARRYFD 488
+T +IL A + + + + K + +V + + G L A
Sbjct: 390 LTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIK 449
Query: 489 SMSFK-NLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSS 539
+M + +L W ++ A H G + + + +EP S LL+S
Sbjct: 450 AMRMEPDLFVWGALLAACRNH--GNMELARIAAKHLAELEPENSGNGLLLTS 499
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 111/229 (48%), Gaps = 6/229 (2%)
Query: 319 MQEDNLIPDAITM------INLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDM 372
M++ ++P + + + L+ + + G+ +H + + + LV
Sbjct: 1 MKKLTIVPSSFRLLSIGSYVELIEANGRDRLFCRGRVLHAHLVTSGIARLTRIAAKLVTF 60
Query: 373 YGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTI 432
Y +CG++ A VF + ++++ +I A +NG +E+L+ F + LK DA +
Sbjct: 61 YVECGKVLDARKVFDEMPKRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLDAFIV 120
Query: 433 ASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSF 492
S+L A L K IH + K S+ F ++++ MY+K G++ AR+ F +
Sbjct: 121 PSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGE 180
Query: 493 KNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCS 541
++LV +N MI YA + ++ L MK GI+P+ T+ +L+S S
Sbjct: 181 QDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFS 229
>AT1G22830.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:8076921-8079032 FORWARD
Length = 703
Score = 281 bits (718), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 187/693 (26%), Positives = 332/693 (47%), Gaps = 62/693 (8%)
Query: 47 MSETPKRGMIKPNSLSLTRSLCEFVDSGAMDNALYLFE-KMNQPDTYIWNVIIRGFSN-- 103
M +P R +++ ++S +C+F+ + E D + V+ F +
Sbjct: 1 MPSSPSRSILRGLTVS---EICKFIPQSWKQLPRPISETSKTHDDESVPQVLFNSFRHCI 57
Query: 104 -KGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLS-------FIEGKKVHGKLIKI 155
G E + + Y+ + + FV+ + LLS F+ G+++H I
Sbjct: 58 SHGQLYEAFRTFSLLRYQ-----SGSHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISS 112
Query: 156 GLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCF 215
GL+ D + L+ Y F ++ A+ + E + + WN ++ Y +S+ +
Sbjct: 113 GLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVY 172
Query: 216 KEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKC 275
K M+ G + D + S + C+ G+ +H + + ++ V +LI MY +
Sbjct: 173 KRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRF 232
Query: 276 GKVDYAERVFNEMTCKNIVAWNAMI----------------------------------- 300
GKVD A R+F+ M+ ++ V+WNA+I
Sbjct: 233 GKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIA 292
Query: 301 GGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFL 360
GG G+++ + C+ M+ N+ ++ MIN L +CS G L GK H IR
Sbjct: 293 GGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSF 352
Query: 361 PHLV--LETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFH 418
H + + +L+ MY +C L+ A VF ++ ++ +WN+II+ + N R+EE L
Sbjct: 353 SHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLK 412
Query: 419 CLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFT-SNAIVYMYAKC 477
+ P+ +T+ASILP +A + + K+ H YI + + + N++V MYAK
Sbjct: 413 EMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKS 472
Query: 478 GDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLL 537
G++ A+R FDSM ++ V++ ++I Y G G +++ F M ++GI+P+ T V++L
Sbjct: 473 GEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVL 532
Query: 538 SSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPT 597
S+CS S LV EG LF M+ + I +EHY CMVDL R G LD A+ +P P+
Sbjct: 533 SACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPS 592
Query: 598 ARIWGSLLTASRNNNDIFFAEFAA-KHILSHDNDNTGCYVLLANMYAEAGRWEDVEQIKL 656
+ + +LL A + + E+AA K +L ++ G Y+LLA+MYA G W + +K
Sbjct: 593 SAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWSKLVTVKT 652
Query: 657 VMKKKGLAKTVDCCTVES----KGKSQKFINNN 685
++ G+ K + +E+ G++ K +N++
Sbjct: 653 LLSDLGVQKAHEFALMETDSELDGENNKPMNDD 685
>AT1G22830.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:8076921-8079032 FORWARD
Length = 703
Score = 281 bits (718), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 187/693 (26%), Positives = 332/693 (47%), Gaps = 62/693 (8%)
Query: 47 MSETPKRGMIKPNSLSLTRSLCEFVDSGAMDNALYLFE-KMNQPDTYIWNVIIRGFSN-- 103
M +P R +++ ++S +C+F+ + E D + V+ F +
Sbjct: 1 MPSSPSRSILRGLTVS---EICKFIPQSWKQLPRPISETSKTHDDESVPQVLFNSFRHCI 57
Query: 104 -KGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLS-------FIEGKKVHGKLIKI 155
G E + + Y+ + + FV+ + LLS F+ G+++H I
Sbjct: 58 SHGQLYEAFRTFSLLRYQ-----SGSHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISS 112
Query: 156 GLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCF 215
GL+ D + L+ Y F ++ A+ + E + + WN ++ Y +S+ +
Sbjct: 113 GLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVY 172
Query: 216 KEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKC 275
K M+ G + D + S + C+ G+ +H + + ++ V +LI MY +
Sbjct: 173 KRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRF 232
Query: 276 GKVDYAERVFNEMTCKNIVAWNAMI----------------------------------- 300
GKVD A R+F+ M+ ++ V+WNA+I
Sbjct: 233 GKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIA 292
Query: 301 GGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFL 360
GG G+++ + C+ M+ N+ ++ MIN L +CS G L GK H IR
Sbjct: 293 GGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSF 352
Query: 361 PHLV--LETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFH 418
H + + +L+ MY +C L+ A VF ++ ++ +WN+II+ + N R+EE L
Sbjct: 353 SHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLK 412
Query: 419 CLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFT-SNAIVYMYAKC 477
+ P+ +T+ASILP +A + + K+ H YI + + + N++V MYAK
Sbjct: 413 EMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKS 472
Query: 478 GDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLL 537
G++ A+R FDSM ++ V++ ++I Y G G +++ F M ++GI+P+ T V++L
Sbjct: 473 GEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVL 532
Query: 538 SSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPT 597
S+CS S LV EG LF M+ + I +EHY CMVDL R G LD A+ +P P+
Sbjct: 533 SACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPS 592
Query: 598 ARIWGSLLTASRNNNDIFFAEFAA-KHILSHDNDNTGCYVLLANMYAEAGRWEDVEQIKL 656
+ + +LL A + + E+AA K +L ++ G Y+LLA+MYA G W + +K
Sbjct: 593 SAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWSKLVTVKT 652
Query: 657 VMKKKGLAKTVDCCTVES----KGKSQKFINNN 685
++ G+ K + +E+ G++ K +N++
Sbjct: 653 LLSDLGVQKAHEFALMETDSELDGENNKPMNDD 685
>AT3G26540.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:9744542-9746644 REVERSE
Length = 700
Score = 281 bits (718), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 170/601 (28%), Positives = 305/601 (50%), Gaps = 33/601 (5%)
Query: 58 PNSLSLTRSLCEFVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRM 117
P L R++ + G +D+A LFE+M + D WN +I + G+ EV + RM
Sbjct: 94 PPIFLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRM 153
Query: 118 EYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFV 177
+G+ +F V+K+CG +L +++H ++K G ++ + S++D+Y K +
Sbjct: 154 NRDGVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVM 213
Query: 178 EVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGC 237
A +VF+ + VSWN +V Y +G ++++ F +ML L +P ++ S + C
Sbjct: 214 SDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLAC 273
Query: 238 SIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNE---------- 287
S + GK IH ++ + D +V TS+ DMY KC +++ A RVF++
Sbjct: 274 SRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWT 333
Query: 288 ---------------------MTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIP 326
M +NIV+WNAM+GGY + E+ L M+++
Sbjct: 334 SAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENI 393
Query: 327 DAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVF 386
D +T++ +L CS + GK HG+ R + ++++ AL+DMYGKCG L+ A F
Sbjct: 394 DNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWF 453
Query: 387 GRINE-KNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATV 445
+++E ++ VSWNA++ + GR+E+AL F ++ + KP T+A++L A + +
Sbjct: 454 RQMSELRDEVSWNALLTGVARVGRSEQALSFFEGMQVEA-KPSKYTLATLLAGCANIPAL 512
Query: 446 SECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAY 505
+ K IH ++ + + A+V MY+KC A F + ++L+ WN++I
Sbjct: 513 NLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGC 572
Query: 506 AIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYG 565
+G +LF ++ G++P+ TF+ +L +C G V G++ F+SM Y+I
Sbjct: 573 CRNGRSKEVFELFMLLENEGVKPDHVTFLGILQACIREGHVELGFQYFSSMSTKYHISPQ 632
Query: 566 IEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTASRNNNDIFFAEFAAKHIL 625
+EHY CM++L + G L ++F+ MP P ++ + A + +AAK ++
Sbjct: 633 VEHYDCMIELYCKYGCLHQLEEFLLLMPFDPPMQMLTRINDACQRYRWSKLGAWAAKRLM 692
Query: 626 S 626
+
Sbjct: 693 N 693
Score = 205 bits (521), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 152/579 (26%), Positives = 263/579 (45%), Gaps = 70/579 (12%)
Query: 46 QMSETPKRGMIKPNSLSLTRSLCEFVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKG 105
+ +T KR + L++TR + E ++ G + A+ + +P +Y W
Sbjct: 15 KQDKTHKRVIGTGTKLTVTRQILEHLEGGNVSKAVSVLFASPEPVSY-W----------- 62
Query: 106 LFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCN 165
Y R+ ++C ++ +KV L+ I++ N
Sbjct: 63 -------LYERL---------------FRSCSSKALVVQARKVQSHLVTFSPLPPIFLLN 100
Query: 166 SLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKP 225
I+ Y K G V+ A ++FE MP RD SWN ++ G + F+ M G +
Sbjct: 101 RAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRA 160
Query: 226 DRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVF 285
S L C + +R +++HC V++ G ++ ++TS++D+Y KC + A RVF
Sbjct: 161 TETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVF 220
Query: 286 NEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLL 345
+E+ + V+WN ++ Y G E+ +M E N+ P T+ +++ +CS+ L
Sbjct: 221 DEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALE 280
Query: 346 EGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGR----------------- 388
GK IH A++ + V+ T++ DMY KC +L+ A VF +
Sbjct: 281 VGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYA 340
Query: 389 --------------INEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIAS 434
+ E+N+VSWNA++ YV +EAL+ +R + D VT+
Sbjct: 341 MSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVW 400
Query: 435 ILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMS-FK 493
IL + ++ V KQ H +I + +N +NA++ MY KCG LQ+A +F MS +
Sbjct: 401 ILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELR 460
Query: 494 NLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELF 553
+ VSWN ++ A G ++ F M+ +P++ T +LL+ C+ +N G +
Sbjct: 461 DEVSWNALLTGVARVGRSEQALSFFEGMQVEA-KPSKYTLATLLAGCANIPALNLGKAIH 519
Query: 554 NSMKMD-YNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEE 591
+ D Y ID I G MVD+ + D A + +E
Sbjct: 520 GFLIRDGYKIDVVIR--GAMVDMYSKCRCFDYAIEVFKE 556
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 109/402 (27%), Positives = 183/402 (45%), Gaps = 32/402 (7%)
Query: 237 CSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAW 296
CS V +++ ++ I + I+ Y KCG VD A +F EM ++ +W
Sbjct: 71 CSSKALVVQARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEEMPERDGGSW 130
Query: 297 NAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIR 356
NA+I A NG E F +RM D + + +L SC L + +H ++
Sbjct: 131 NAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLRQLHCAVVK 190
Query: 357 KMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALEL 416
+ ++ LET++VD+YGKC + A VF I + VSWN I+ Y++ G N+EA+ +
Sbjct: 191 YGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVM 250
Query: 417 FHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAK 476
F + ++P T++S++ A + + K IHA KL + ++T S ++ MY K
Sbjct: 251 FFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVK 310
Query: 477 CGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGI---------- 526
C L++ARR FD K+L SW + + YA+ G + +LF M + I
Sbjct: 311 CDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGY 370
Query: 527 ----EPNES-----------------TFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYG 565
E +E+ T V +L+ CS V G + + + D
Sbjct: 371 VHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQA-HGFIYRHGYDTN 429
Query: 566 IEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTA 607
+ ++D+ G+ G L +A + +M + W +LLT
Sbjct: 430 VIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTG 471
>AT2G44880.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:18505239-18506906 FORWARD
Length = 555
Score = 279 bits (713), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 176/543 (32%), Positives = 273/543 (50%), Gaps = 30/543 (5%)
Query: 180 AEKVFEAMPLRD--LVSWNCMVNGY---RVIGDG------LKSLMCFKEMLGLGEKPDRL 228
A K+F+ P RD +S N M+ Y R D L+ CF PD
Sbjct: 29 ARKLFDQRPQRDDSFLS-NSMIKAYLETRQYPDSFALYRDLRKETCFA--------PDNF 79
Query: 229 SMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEM 288
+ + CS+ CV G ++H Q+ R G D+ V T ++DMYAK GK+ A F+EM
Sbjct: 80 TFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEM 139
Query: 289 TCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGK 348
++ V+W A+I GY G + +M + D + ++ K G + +
Sbjct: 140 PHRSEVSWTALISGYIRCGELDLASKLFDQMPH---VKDVVIYNAMMDGFVKSGDMTSAR 196
Query: 349 CIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNG 408
+ K ++ T ++ Y + A +F + E+N+VSWN +I Y QN
Sbjct: 197 RLFDEMTHKT----VITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNK 252
Query: 409 RNEEALELFHCLRNQT-LKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTS 467
+ +E + LF ++ T L PD VTI S+LPA ++ +S + H ++ + +L
Sbjct: 253 QPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVC 312
Query: 468 NAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIE 527
AI+ MY+KCG+++ A+R FD M K + SWN MI YA++G ++ LF M +
Sbjct: 313 TAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTMMIEE-K 371
Query: 528 PNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQ 587
P+E T ++++++C+ GLV EG + F+ M+ + ++ IEHYGCMVDLLGR G+L A+
Sbjct: 372 PDEITMLAVITACNHGGLVEEGRKWFHVMR-EMGLNAKIEHYGCMVDLLGRAGSLKEAED 430
Query: 588 FIEEMPLVPTARIWGSLLTASRNNNDIFFAEFAAKHILSHDNDNTGCYVLLANMYAEAGR 647
I MP P I S L+A DI AE K + + N G YVLL N+YA R
Sbjct: 431 LITNMPFEPNGIILSSFLSACGQYKDIERAERILKKAVELEPQNDGNYVLLRNLYAADKR 490
Query: 648 WEDVEQIKLVMKKKGLAKTVDCCTVESKGKSQKFINNNKSHQQAYMIYDVLDIILKKIGE 707
W+D +K VM+K K V C +E +FI+ + +H I+ VL +L + E
Sbjct: 491 WDDFGMVKNVMRKNQAKKEVGCSLIEINYIVSEFISGDTTHPHRRSIHLVLGDLLMHMNE 550
Query: 708 DVY 710
+ Y
Sbjct: 551 EKY 553
Score = 183 bits (464), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 120/445 (26%), Positives = 218/445 (48%), Gaps = 13/445 (2%)
Query: 53 RGMIKPNSLSLTRSLCEFVDSGAMDNALYLFEKMNQ-PDTYIWNVIIRGFSNKGLFQEVI 111
R I+ N T+ L + + A LF++ Q D+++ N +I+ + + +
Sbjct: 3 RHAIETNVQIFTKFLVISASAVGIGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSF 62
Query: 112 DFYHRMEYEG-IGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDM 170
Y + E DNFTF + K+C + +G ++H ++ + G D+YV ++DM
Sbjct: 63 ALYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDM 122
Query: 171 YFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSM 230
Y KFG + A F+ MP R VSW +++GY G+ + F +M + + +M
Sbjct: 123 YAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVKDVVIYNAM 182
Query: 231 ISSLGGCSIGCCVRGGKEIHCQVIRNGL-ELDIMVQTSLIDMYAKCGKVDYAERVFNEMT 289
+ V+ G + + + + ++ T++I Y +D A ++F+ M
Sbjct: 183 MDGF--------VKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMP 234
Query: 290 CKNIVAWNAMIGGYAINGHFLESFTCLKRMQ-EDNLIPDAITMINLLPSCSKFGTLLEGK 348
+N+V+WN MIGGY N E + MQ +L PD +T++++LP+ S G L G+
Sbjct: 235 ERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGE 294
Query: 349 CIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNG 408
H + RK + + TA++DMY KCG+++ A+ +F + EK + SWNA+I Y NG
Sbjct: 295 WCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNG 354
Query: 409 RNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSN 468
AL+LF + + KPD +T+ +++ A V E ++ + ++ L++
Sbjct: 355 NARAALDLFVTMMIEE-KPDEITMLAVITACNHGGLVEEGRKWFHVMREMGLNAKIEHYG 413
Query: 469 AIVYMYAKCGDLQTARRYFDSMSFK 493
+V + + G L+ A +M F+
Sbjct: 414 CMVDLLGRAGSLKEAEDLITNMPFE 438
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 96/345 (27%), Positives = 159/345 (46%), Gaps = 51/345 (14%)
Query: 43 TKKQMSETPKRGMIKPNSLSLTRSLCEFVDSGAMDNALYLFEKMNQ-PDTYIWNVIIRGF 101
+ E P R + +S T + ++ G +D A LF++M D I+N ++ GF
Sbjct: 132 ARNAFDEMPHR-----SEVSWTALISGYIRCGELDLASKLFDQMPHVKDVVIYNAMMDGF 186
Query: 102 SNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDI 161
G + M + + +
Sbjct: 187 VKSGDMTSARRLFDEMTH---------------------------------------KTV 207
Query: 162 YVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGL 221
++I Y ++ A K+F+AMP R+LVSWN M+ GY + + F+EM
Sbjct: 208 ITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQAT 267
Query: 222 GE-KPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDY 280
PD ++++S L S + G+ HC V R L+ + V T+++DMY+KCG+++
Sbjct: 268 TSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEK 327
Query: 281 AERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSK 340
A+R+F+EM K + +WNAMI GYA+NG+ + M + PD ITM+ ++ +C+
Sbjct: 328 AKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTMMIEEK-PDEITMLAVITACNH 386
Query: 341 FGTLLEG-KCIHGYAIRKMFLPHLVLETA-LVDMYGKCGQLKFAE 383
G + EG K H +R+M L + +VD+ G+ G LK AE
Sbjct: 387 GGLVEEGRKWFH--VMREMGLNAKIEHYGCMVDLLGRAGSLKEAE 429
>AT5G59200.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:23888793-23890565 REVERSE
Length = 590
Score = 275 bits (704), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 160/499 (32%), Positives = 269/499 (53%), Gaps = 30/499 (6%)
Query: 227 RLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFN 286
R ++IS L C V IH ++IR + D V LI + + VDYA VF+
Sbjct: 75 RKTLISVLRSCKNIAHV---PSIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFS 131
Query: 287 EMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCS------- 339
++ N+ + AMI G+ +G + + RM ++++PD + ++L +C
Sbjct: 132 YVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKACDLKVCREI 191
Query: 340 -------KFGT-------LLE--GKCIHGYAIRKMF--LPHL--VLETALVDMYGKCGQL 379
FG+ ++E GK +KMF +P V T +++ Y +CG +
Sbjct: 192 HAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFI 251
Query: 380 KFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAY 439
K A +F + K+ V W A+I V+N +ALELF ++ + + + T +L A
Sbjct: 252 KEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSAC 311
Query: 440 AELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWN 499
++L + + +H+++ + + F NA++ MY++CGD+ ARR F M K+++S+N
Sbjct: 312 SDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYN 371
Query: 500 TMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMD 559
TMI A+HG +I F M G PN+ T V+LL++CS GL++ G E+FNSMK
Sbjct: 372 TMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRV 431
Query: 560 YNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTASRNNNDIFFAEF 619
+N++ IEHYGC+VDLLGR G L+ A +FIE +P+ P + G+LL+A + + ++ E
Sbjct: 432 FNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGEK 491
Query: 620 AAKHILSHDNDNTGCYVLLANMYAEAGRWEDVEQIKLVMKKKGLAKTVDCCTVESKGKSQ 679
AK + +N ++G YVLL+N+YA +G+W++ +I+ M+ G+ K C T+E +
Sbjct: 492 IAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEKEPGCSTIEVDNQIH 551
Query: 680 KFINNNKSHQQAYMIYDVL 698
+F+ + +H IY L
Sbjct: 552 EFLVGDIAHPHKEAIYQRL 570
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 90/349 (25%), Positives = 171/349 (48%), Gaps = 40/349 (11%)
Query: 67 LCEFVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDN 126
+C +DS +D A +F ++ P+ Y++ +I GF + G + + YHRM + + DN
Sbjct: 116 VCSTLDS--VDYAYDVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDN 173
Query: 127 FTFPFVIKACGRLLSFIEGKKVHGKLIKIGL----------------------------- 157
+ V+KAC + +++H +++K+G
Sbjct: 174 YVITSVLKACDLKVC----REIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDE 229
Query: 158 --DRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCF 215
DRD +I+ Y + GF++ A ++F+ + ++D V W M++G + K+L F
Sbjct: 230 MPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELF 289
Query: 216 KEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKC 275
+EM + + + L CS + G+ +H V +EL V +LI+MY++C
Sbjct: 290 REMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRC 349
Query: 276 GKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLL 335
G ++ A RVF M K+++++N MI G A++G +E+ + M P+ +T++ LL
Sbjct: 350 GDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALL 409
Query: 336 PSCSKFGTLLEGKCIHGYAIRKMF--LPHLVLETALVDMYGKCGQLKFA 382
+CS G L G + +++++F P + +VD+ G+ G+L+ A
Sbjct: 410 NACSHGGLLDIGLEVFN-SMKRVFNVEPQIEHYGCIVDLLGRVGRLEEA 457
Score = 138 bits (347), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 115/485 (23%), Positives = 219/485 (45%), Gaps = 61/485 (12%)
Query: 128 TFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAM 187
T V+++C + +H K+I+ D+D +V LI + V+ A VF +
Sbjct: 77 TLISVLRSCKNIAHV---PSIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYV 133
Query: 188 PLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGK 247
++ + M++G+ G + + M+ PD + S L C + C +
Sbjct: 134 SNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKACDLKVC----R 189
Query: 248 EIHCQVIRNGL-------------------------------ELDIMVQTSLIDMYAKCG 276
EIH QV++ G + D + T +I+ Y++CG
Sbjct: 190 EIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECG 249
Query: 277 KVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLP 336
+ A +F ++ K+ V W AMI G N ++ + MQ +N+ + T + +L
Sbjct: 250 FIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLS 309
Query: 337 SCSKFGTLLEGKCIHGYAI-RKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMV 395
+CS G L G+ +H + ++M L + V AL++MY +CG + A VF + +K+++
Sbjct: 310 ACSDLGALELGRWVHSFVENQRMELSNFV-GNALINMYSRCGDINEARRVFRVMRDKDVI 368
Query: 396 SWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAE-------LATVSEC 448
S+N +I+ +G + EA+ F + N+ +P+ VT+ ++L A + L +
Sbjct: 369 SYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSM 428
Query: 449 KQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFK-NLVSWNTMIMAYAI 507
K++ ++E IV + + G L+ A R+ +++ + + + T++ A I
Sbjct: 429 KRVFNVEPQIE------HYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKI 482
Query: 508 HGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIE 567
HG + ++ R+ ++ P+ T+V L + + SG E E+ SM+ D GIE
Sbjct: 483 HGNMELGEKIAKRLFESE-NPDSGTYVLLSNLYASSGKWKESTEIRESMR-----DSGIE 536
Query: 568 -HYGC 571
GC
Sbjct: 537 KEPGC 541
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 144/304 (47%), Gaps = 11/304 (3%)
Query: 43 TKKQMSETPKRGMIKPNSLSLTRSLCEFVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFS 102
KK E P R + + S C F+ AL LF+ + DT W +I G
Sbjct: 223 AKKMFDEMPDRDHVAATVMINCYSECGFIKE-----ALELFQDVKIKDTVCWTAMIDGLV 277
Query: 103 NKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIY 162
+ ++ + M+ E + + FT V+ AC L + G+ VH + ++ +
Sbjct: 278 RNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNF 337
Query: 163 VCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLG 222
V N+LI+MY + G + A +VF M +D++S+N M++G + G ++++ F++M+ G
Sbjct: 338 VGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRG 397
Query: 223 EKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRN-GLELDIMVQTSLIDMYAKCGKVDYA 281
+P+++++++ L CS G + G E+ + R +E I ++D+ + G+++ A
Sbjct: 398 FRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEA 457
Query: 282 ERVFNEMTCK-NIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMI---NLLPS 337
R + + + + ++ I+G+ KR+ E PD+ T + NL S
Sbjct: 458 YRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIAKRLFESE-NPDSGTYVLLSNLYAS 516
Query: 338 CSKF 341
K+
Sbjct: 517 SGKW 520
>AT2G45350.1 | Symbols: CRR4 | CRR4 (CHLORORESPIRATORY REDUCTION 4)
| chr2:18694816-18696636 REVERSE
Length = 606
Score = 274 bits (701), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 171/577 (29%), Positives = 299/577 (51%), Gaps = 46/577 (7%)
Query: 147 KVHGKLIKIGLDRDIYVCNSLIDMYF---KFGFVEVAEKVFEAM--------PLRDLVSW 195
++HG+LIK G+ ++ + ++ + + + A VF + D W
Sbjct: 23 QIHGRLIKTGIIKNSNLTTRIVLAFASSRRPYLADFARCVFHEYHVCSFSFGEVEDPFLW 82
Query: 196 NCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIR 255
N ++ + D ++L+ ML G D+ S+ L CS V+GG +IH + +
Sbjct: 83 NAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKGGMQIHGFLKK 142
Query: 256 NGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTC 315
GL D+ +Q LI +Y KCG + + ++F+ M ++ V++N+MI GY G + +
Sbjct: 143 TGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSAREL 202
Query: 316 --LKRMQEDNLIP----------------------------DAITMINLLPSCSKFGTLL 345
L M+ NLI D I+ +++ K G +
Sbjct: 203 FDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDLISWNSMIDGYVKHGRIE 262
Query: 346 EGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYV 405
+ K + R+ +V ++D Y K G + A+ +F ++ +++V++N+++A YV
Sbjct: 263 DAKGLFDVMPRR----DVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYV 318
Query: 406 QNGRNEEALELFHCLRNQT-LKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNT 464
QN + EALE+F + ++ L PD T+ +LPA A+L +S+ +H YI + +
Sbjct: 319 QNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGG 378
Query: 465 FTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQN 524
A++ MY+KCG +Q A F+ + K++ WN MI AIHG G + + ++++
Sbjct: 379 KLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERL 438
Query: 525 GIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDA 584
++P++ TFV +L++CS SGLV EG F M+ + I+ ++HYGCMVD+L R+G+++
Sbjct: 439 SLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIEL 498
Query: 585 AKQFIEEMPLVPTARIWGSLLTASRNNNDIFFAEFAAKHILSHDNDNTGCYVLLANMYAE 644
AK IEEMP+ P IW + LTA ++ + E AKH++ N YVLL+NMYA
Sbjct: 499 AKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGYNPSSYVLLSNMYAS 558
Query: 645 AGRWEDVEQIKLVMKKKGLAKTVDCCTVESKGKSQKF 681
G W+DV +++ +MK++ + K C +E G+ +F
Sbjct: 559 FGMWKDVRRVRTMMKERKIEKIPGCSWIELDGRVHEF 595
Score = 191 bits (484), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 134/478 (28%), Positives = 239/478 (50%), Gaps = 34/478 (7%)
Query: 90 DTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVH 149
D ++WN +I+ S+ ++ + M G+ +D F+ V+KAC RL G ++H
Sbjct: 78 DPFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKGGMQIH 137
Query: 150 GKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGY------- 202
G L K GL D+++ N LI +Y K G + ++ ++F+ MP RD VS+N M++GY
Sbjct: 138 GFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIV 197
Query: 203 --RVIGD----GLKSLMCFKEML-GLGEKPDRLSMISSL-----------GGCSIGCCVR 244
R + D +K+L+ + M+ G + D + + S L I V+
Sbjct: 198 SARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDLISWNSMIDGYVK 257
Query: 245 GGKEIHCQVIRNGL-ELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGY 303
G+ + + + + D++ ++ID YAK G V +A+ +F++M +++VA+N+M+ GY
Sbjct: 258 HGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGY 317
Query: 304 AINGHFLESFTCLKRMQ-EDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPH 362
N + +E+ M+ E +L+PD T++ +LP+ ++ G L + +H Y + K F
Sbjct: 318 VQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLG 377
Query: 363 LVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRN 422
L AL+DMY KCG ++ A VF I K++ WNA+I +G E A ++ +
Sbjct: 378 GKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIER 437
Query: 423 QTLKPDAVTIASILPAYAELATVSE---CKQIHAYITKLELSSNTFTSNAIVYMYAKCGD 479
+LKPD +T +L A + V E C ++ K+E + +V + ++ G
Sbjct: 438 LSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHY--GCMVDILSRSGS 495
Query: 480 LQTARRYFDSMSFK-NLVSWNTMIMAYAIHG-FGTISIQLFSRMKQNGIEPNESTFVS 535
++ A+ + M + N V W T + A + H F T + + Q G P+ +S
Sbjct: 496 IELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGYNPSSYVLLS 553
>AT1G17630.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:6064525-6066720 FORWARD
Length = 731
Score = 273 bits (698), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 196/674 (29%), Positives = 316/674 (46%), Gaps = 94/674 (13%)
Query: 125 DNFTFPFVIKACGRLLSFIEGKKVHGK-LIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKV 183
D F + G L+ + ++VH + L+ + R + +LI +Y + G + A V
Sbjct: 52 DQSLFHYFDHLLGLCLTAQQCRQVHAQVLLSDFIFRSGSLAANLISVYARLGLLLDARNV 111
Query: 184 FEAMPL---RDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCS-- 238
FE + L DL WN ++ G +L ++ M G D + L C
Sbjct: 112 FETVSLVLLSDLRLWNSILKANVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYL 171
Query: 239 --IGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAW 296
G C + H QVI+ GL+ ++ V L+ +Y K G++ A +F EM +N ++W
Sbjct: 172 GRFGLC----RAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSW 227
Query: 297 NAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLP---SCSKF------------ 341
N MI G++ + + MQ + PD +T ++L C KF
Sbjct: 228 NVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRM 287
Query: 342 -GTLLEGKC-------------------IHGYAIRKMFLPHLVLETALVDMYGKCGQLKF 381
G + G+ +HGY I+ F +L AL+ +YGK G++K
Sbjct: 288 SGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKD 347
Query: 382 AECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQT----------------- 424
AE +F +I K + SWN++I ++V G+ +EAL LF L
Sbjct: 348 AEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIK 407
Query: 425 ----------------------LKPDAVTIASILPAYAELATVSECKQIHAYITKLELSS 462
+ ++VTI IL AEL ++ ++IH ++ + +S
Sbjct: 408 GCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSE 467
Query: 463 NTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMK 522
N NA+V MYAKCG L F+++ K+L+SWN++I Y +HGF ++ +F RM
Sbjct: 468 NILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMI 527
Query: 523 QNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNL 582
+G P+ V++LS+CS +GLV +G E+F SM + ++ EHY C+VDLLGR G L
Sbjct: 528 SSGFHPDGIALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFL 587
Query: 583 DAAKQFIEEMPLVPTARIWGSLLTASRNNNDIFFAEFAAKHILSHDNDNTGCYVLLANMY 642
A + ++ MP+ P + G+LL + R + ++ AE A + + + TG Y+LL+N+Y
Sbjct: 588 KEASEIVKNMPMEPKVCVLGALLNSCRMHKNVDIAEGIASQLSVLEPERTGSYMLLSNIY 647
Query: 643 AEAGRWEDVEQIKLVMKKKGLAKTVDCCTVESKGKSQKFINNNKSHQQAYMIYDVLDIIL 702
+ GRWE+ ++ + KKK L K +E K K KF + + + IY VL
Sbjct: 648 SAGGRWEESANVRALAKKKDLKKVSGSSWIEVKKKKYKFSSGSIVQSEFETIYPVL---- 703
Query: 703 KKIGEDVYIHSLSK 716
ED+ H L K
Sbjct: 704 ----EDLVSHMLKK 713
Score = 175 bits (443), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 126/501 (25%), Positives = 226/501 (45%), Gaps = 84/501 (16%)
Query: 74 GAMDNALYLFEKMNQ---PDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFP 130
G + +A +FE ++ D +WN I++ + GL++ ++ Y M G+ D + P
Sbjct: 103 GLLLDARNVFETVSLVLLSDLRLWNSILKANVSHGLYENALELYRGMRQRGLTGDGYILP 162
Query: 131 FVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLR 190
+++AC L F + H ++I+IGL +++V N L+ +Y K G + A +F MP+R
Sbjct: 163 LILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVR 222
Query: 191 DLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGC--------- 241
+ +SWN M+ G+ D ++ F+ M KPD ++ S L C C
Sbjct: 223 NRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVL-SCHSQCGKFEDVLKY 281
Query: 242 ---------CVRG------------------GKEIHCQVIRNGLELDIMVQTSLIDMYAK 274
V G +++H VI+ G E + + +LI +Y K
Sbjct: 282 FHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGK 341
Query: 275 CGKVDYAERVFNEMTCK---------------------------------------NIVA 295
GKV AE +F ++ K N+V
Sbjct: 342 QGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVT 401
Query: 296 WNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAI 355
W ++I G + G +S ++MQ ++ +++T+ +L C++ L G+ IHG+ I
Sbjct: 402 WTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSICAELPALNLGREIHGHVI 461
Query: 356 RKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALE 415
R +++++ ALV+MY KCG L VF I +K+++SWN+II Y +G E+AL
Sbjct: 462 RTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALS 521
Query: 416 LFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITK---LELSSNTFTSNAIVY 472
+F + + PD + + ++L A + V + ++I ++K LE + IV
Sbjct: 522 MFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQEHYA--CIVD 579
Query: 473 MYAKCGDLQTARRYFDSMSFK 493
+ + G L+ A +M +
Sbjct: 580 LLGRVGFLKEASEIVKNMPME 600
Score = 119 bits (298), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 138/273 (50%), Gaps = 16/273 (5%)
Query: 27 PKRDLLVN--PRIRKSNPTKKQMSETPKRGMIKPNSLSLTRSLCEFVDSGAMDNALYLF- 83
P R+ L++ + K + + +G+ NSL + FVD+G +D AL LF
Sbjct: 330 PSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSL-----ITSFVDAGKLDEALSLFS 384
Query: 84 --EKMN-----QPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKAC 136
E+MN + + W +I+G + +G + ++++ +M++ + ++ T ++ C
Sbjct: 385 ELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSIC 444
Query: 137 GRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWN 196
L + G+++HG +I+ + +I V N+L++MY K G + VFEA+ +DL+SWN
Sbjct: 445 AELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLISWN 504
Query: 197 CMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEI-HCQVIR 255
++ GY + G K+L F M+ G PD +++++ L CS V G+EI + R
Sbjct: 505 SIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREIFYSMSKR 564
Query: 256 NGLELDIMVQTSLIDMYAKCGKVDYAERVFNEM 288
GLE ++D+ + G + A + M
Sbjct: 565 FGLEPQQEHYACIVDLLGRVGFLKEASEIVKNM 597
>AT5G56310.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:22802322-22803914 FORWARD
Length = 530
Score = 273 bits (697), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 156/489 (31%), Positives = 258/489 (52%), Gaps = 38/489 (7%)
Query: 247 KEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAI- 305
K+ HC +I GL D + I+ + G + YA VF C N N MI ++
Sbjct: 32 KQSHCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLHNTMIRALSLL 91
Query: 306 ---NGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPH 362
N H + + T +++ PD T +L + + G+ IHG + F
Sbjct: 92 DEPNAHSI-AITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSS 150
Query: 363 LVLETALVDMYGKCGQLKFAECVF------------------GRINE------------- 391
+ + T L+ MY CG L A +F G++ E
Sbjct: 151 VHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPC 210
Query: 392 --KNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECK 449
+N VSW +I+ Y ++GR EA+E+F + + ++PD VT+ ++L A A+L ++ +
Sbjct: 211 WVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGE 270
Query: 450 QIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHG 509
+I +Y+ ++ +NA++ MYAK G++ A F+ ++ +N+V+W T+I A HG
Sbjct: 271 RICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHG 330
Query: 510 FGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHY 569
G ++ +F+RM + G+ PN+ TF+++LS+CS G V+ G LFNSM+ Y I IEHY
Sbjct: 331 HGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHY 390
Query: 570 GCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTASRNNNDIFFAEFAAKHILSHDN 629
GCM+DLLGR G L A + I+ MP A IWGSLL AS ++D+ E A ++ +
Sbjct: 391 GCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERALSELIKLEP 450
Query: 630 DNTGCYVLLANMYAEAGRWEDVEQIKLVMKKKGLAKTVDCCTVESKGKSQKFINNNKSHQ 689
+N+G Y+LLAN+Y+ GRW++ ++ +MK G+ K ++E + + KFI+ + +H
Sbjct: 451 NNSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSIEVENRVYKFISGDLTHP 510
Query: 690 QAYMIYDVL 698
Q I+++L
Sbjct: 511 QVERIHEIL 519
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 114/432 (26%), Positives = 198/432 (45%), Gaps = 40/432 (9%)
Query: 146 KKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVI 205
K+ H +I GL+RD I+ G + A VF P + N M+ ++
Sbjct: 32 KQSHCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLHNTMIRALSLL 91
Query: 206 GDGLK---SLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDI 262
+ ++ ++++ L KPD + L V G++IH QV+ G + +
Sbjct: 92 DEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSV 151
Query: 263 MVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLE----------- 311
V T LI MY CG + A ++F+EM K++ WNA++ GY G E
Sbjct: 152 HVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCW 211
Query: 312 -----SFTCL-----------------KRMQEDNLIPDAITMINLLPSCSKFGTLLEGKC 349
S+TC+ +RM +N+ PD +T++ +L +C+ G+L G+
Sbjct: 212 VRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGER 271
Query: 350 IHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGR 409
I Y + + L A++DMY K G + A VF +NE+N+V+W IIA +G
Sbjct: 272 ICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGH 331
Query: 410 NEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQI-HAYITKLELSSNTFTSN 468
EAL +F+ + ++P+ VT +IL A + + V K++ ++ +K + N
Sbjct: 332 GAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYG 391
Query: 469 AIVYMYAKCGDLQTARRYFDSMSFK-NLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIE 527
++ + + G L+ A SM FK N W +++ A +H + + S + + +E
Sbjct: 392 CMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERALSELIK--LE 449
Query: 528 PNESTFVSLLSS 539
PN S LL++
Sbjct: 450 PNNSGNYMLLAN 461
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 118/242 (48%), Gaps = 5/242 (2%)
Query: 74 GAMDNALYLFEKMN--QPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPF 131
G MD A L E M + W +I G++ G E I+ + RM E + D T
Sbjct: 196 GEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLA 255
Query: 132 VIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRD 191
V+ AC L S G+++ + G++R + + N++IDMY K G + A VFE + R+
Sbjct: 256 VLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERN 315
Query: 192 LVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCS-IGCCVRGGKEIH 250
+V+W ++ G G G ++L F M+ G +P+ ++ I+ L CS +G G + +
Sbjct: 316 VVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFN 375
Query: 251 CQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCK-NIVAWNAMIGGYAINGHF 309
+ G+ +I +ID+ + GK+ A+ V M K N W +++ ++ H
Sbjct: 376 SMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVH-HD 434
Query: 310 LE 311
LE
Sbjct: 435 LE 436
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 74/145 (51%), Gaps = 4/145 (2%)
Query: 48 SETPKRGMIKPNSLSLTRSLCE-FVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGL 106
S RGM + ++SL ++ + + SG + AL +FE +N+ + W II G + G
Sbjct: 274 SYVDHRGMNR--AVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGH 331
Query: 107 FQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKL-IKIGLDRDIYVCN 165
E + ++RM G+ ++ TF ++ AC + GK++ + K G+ +I
Sbjct: 332 GAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYG 391
Query: 166 SLIDMYFKFGFVEVAEKVFEAMPLR 190
+ID+ + G + A++V ++MP +
Sbjct: 392 CMIDLLGRAGKLREADEVIKSMPFK 416
>AT4G22760.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:11958477-11962870 FORWARD
Length = 889
Score = 272 bits (695), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 180/611 (29%), Positives = 321/611 (52%), Gaps = 40/611 (6%)
Query: 82 LFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLS 141
L K+ + IWN++ + F + + V++F +M +D+ F ++ C +
Sbjct: 236 LIGKIMRRTRRIWNILWKVF-GRLVLVLVLEFVSQM------LDS-KLRFFLQRC---VV 284
Query: 142 FIEGKKVHGKLI--KIGLDRDIYVCNSL-IDMYFKFGFVEVAEKVFEAMPLRDLVSWNCM 198
+ K+VH +L+ + I V +L F V +++ + D SW C+
Sbjct: 285 LEQAKQVHAQLVVNRYNHLEPILVHQTLHFTKEFSRNIVTYVKRILKGFNGHDSFSWGCL 344
Query: 199 VNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGL 258
V +++ + +M G P ++ S L C + GK IH Q ++NGL
Sbjct: 345 VRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPIHAQALKNGL 404
Query: 259 ELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKR 318
+ VQT L+ +Y++ G ++ A++ F+++ KN V+WN+++ GY +G E+ +
Sbjct: 405 CGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEARRVFDK 464
Query: 319 MQEDNLIP---------------DAITMINLLP--SCSKFGTLLEG--KCIHGYAIRKMF 359
+ E + + +A ++ + +P S + + L+ G C R F
Sbjct: 465 IPEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASWNILIGGYVNCREMKLARTYF 524
Query: 360 --LPHL--VLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALE 415
+P V ++ Y K G ++ AE +F +++K+ + ++A+IA Y QNG+ ++AL+
Sbjct: 525 DAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQNGKPKDALK 584
Query: 416 LFHCL--RNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYM 473
LF + RN ++PD +T++S++ A ++L S + +YIT+ + + S +++ +
Sbjct: 585 LFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDL 644
Query: 474 YAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTF 533
Y K GD A + F +++ K+ VS++ MIM I+G T + LF+ M + I PN TF
Sbjct: 645 YMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTF 704
Query: 534 VSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMP 593
LLS+ S SGLV EG++ FNSMK D+N++ +HYG MVD+LGR G L+ A + I+ MP
Sbjct: 705 TGLLSAYSHSGLVQEGYKCFNSMK-DHNLEPSADHYGIMVDMLGRAGRLEEAYELIKSMP 763
Query: 594 LVPTARIWGSLLTASRNNNDIFFAEFAAKHILSHDNDNTGCYVLLANMYAEAGRWEDVEQ 653
+ P A +WG+LL AS +N++ F E A H + + D TG LA +Y+ GRW+D
Sbjct: 764 MQPNAGVWGALLLASGLHNNVEFGEIACSHCVKLETDPTGYLSHLAMIYSSVGRWDDART 823
Query: 654 IKLVMKKKGLA 664
++ +K+K L+
Sbjct: 824 VRDSIKEKKLS 834
>AT3G20730.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:7247095-7248878 FORWARD
Length = 564
Score = 270 bits (689), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 161/519 (31%), Positives = 284/519 (54%), Gaps = 4/519 (0%)
Query: 148 VHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGD 207
+HG I G ++ + + LID+Y K G V+ A K+F+ + RD+VSW M++ + G
Sbjct: 34 IHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGY 93
Query: 208 GLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTS 267
+L+ FKEM K ++ + S L C C++ G +IH V + +++V+++
Sbjct: 94 HPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSA 153
Query: 268 LIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPD 327
L+ +YA+CGK++ A F+ M +++V+WNAMI GY N SF+ + M + PD
Sbjct: 154 LLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPD 213
Query: 328 AITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFG 387
T +LL + L +HG AI+ F L +LV+ Y KCG L A +
Sbjct: 214 CFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHE 273
Query: 388 RINEKNMVSWNAIIAAYV-QNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVS 446
+++++S A+I + QN +A ++F + K D V ++S+L +A+V+
Sbjct: 274 GTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVT 333
Query: 447 ECKQIHAYITK-LELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAY 505
+QIH + K ++ + N+++ MYAK G+++ A F+ M K++ SW ++I Y
Sbjct: 334 IGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGY 393
Query: 506 AIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYG 565
HG +I L++RM+ I+PN+ TF+SLLS+CS +G GW+++++M + I+
Sbjct: 394 GRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAR 453
Query: 566 IEHYGCMVDLLGRTGNLDAAKQFI--EEMPLVPTARIWGSLLTASRNNNDIFFAEFAAKH 623
EH C++D+L R+G L+ A I +E + ++ WG+ L A R + ++ ++ AA
Sbjct: 454 EEHLSCIIDMLARSGYLEEAYALIRSKEGIVSLSSSTWGAFLDACRRHGNVQLSKVAATQ 513
Query: 624 ILSHDNDNTGCYVLLANMYAEAGRWEDVEQIKLVMKKKG 662
+LS + Y+ LA++YA G W++ + +MK+ G
Sbjct: 514 LLSMEPRKPVNYINLASVYAANGAWDNALNTRKLMKESG 552
Score = 179 bits (453), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 114/417 (27%), Positives = 215/417 (51%), Gaps = 3/417 (0%)
Query: 70 FVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTF 129
++ G + +A LF+++++ D W +I FS G + + + M E + + FT+
Sbjct: 57 YLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTY 116
Query: 130 PFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPL 189
V+K+C L EG ++HG + K ++ V ++L+ +Y + G +E A F++M
Sbjct: 117 GSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKE 176
Query: 190 RDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEI 249
RDLVSWN M++GY S F+ ML G+KPD + S L + C+ E+
Sbjct: 177 RDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSEL 236
Query: 250 HCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYA-INGH 308
H I+ G + SL++ Y KCG + A ++ +++++ A+I G++ N
Sbjct: 237 HGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNC 296
Query: 309 FLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLP-HLVLET 367
++F K M D + + ++L C+ ++ G+ IHG+A++ + + L
Sbjct: 297 TSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGN 356
Query: 368 ALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKP 427
+L+DMY K G+++ A F + EK++ SW ++IA Y ++G E+A++L++ + ++ +KP
Sbjct: 357 SLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKP 416
Query: 428 DAVTIASILPAYAELATVSECKQIH-AYITKLELSSNTFTSNAIVYMYAKCGDLQTA 483
+ VT S+L A + +I+ I K + + + I+ M A+ G L+ A
Sbjct: 417 NDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEA 473
Score = 138 bits (347), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 100/375 (26%), Positives = 179/375 (47%), Gaps = 18/375 (4%)
Query: 46 QMSETPKRGMIKPNSLSLTRSLCEFVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKG 105
Q+ + ++G N + + L + G M+ A F+ M + D WN +I G++
Sbjct: 134 QIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANA 193
Query: 106 LFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCN 165
+ M EG D FTF +++A + ++HG IK+G R +
Sbjct: 194 CADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIR 253
Query: 166 SLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLK-SLMCFKEMLGLGEK 224
SL++ Y K G + A K+ E RDL+S ++ G+ + + FK+M+ + K
Sbjct: 254 SLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTK 313
Query: 225 PDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNG-LELDIMVQTSLIDMYAKCGKVDYAER 283
D + + S L C+ V G++IH +++ + D+ + SLIDMYAK G+++ A
Sbjct: 314 MDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVL 373
Query: 284 VFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGT 343
F EM K++ +W ++I GY +G+F ++ RM+ + + P+ +T ++LL +CS G
Sbjct: 374 AFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQ 433
Query: 344 LLEGKCIHGYAIRKMFL----PHLVLETALVDMYGKCGQLKFAECVFGRINEKNMV---- 395
G I+ I K + HL + ++DM + G L+ A + I K +
Sbjct: 434 TELGWKIYDTMINKHGIEAREEHL---SCIIDMLARSGYLEEA---YALIRSKEGIVSLS 487
Query: 396 --SWNAIIAAYVQNG 408
+W A + A ++G
Sbjct: 488 SSTWGAFLDACRRHG 502
>AT2G36980.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15531161-15533038 FORWARD
Length = 625
Score = 268 bits (686), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 172/598 (28%), Positives = 276/598 (46%), Gaps = 69/598 (11%)
Query: 173 KFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMIS 232
K G + A +VF+ MP D V+WN M+ Y +G +++ F ++ KPD S +
Sbjct: 16 KSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSFTA 75
Query: 233 SLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTC-- 290
L C+ V+ G++I VIR+G + V SLIDMY KC A +VF +M C
Sbjct: 76 ILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCDS 135
Query: 291 KNIV-------------------------------AWNAMIGGYAINGHFLESFTCLKRM 319
+N V AWN MI G+A G + K M
Sbjct: 136 RNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEM 195
Query: 320 QEDNLIPDAITMINLLPSCSKFGT-LLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQ 378
E PD T +L+ +CS + ++ G+ +H ++ + + + +++ Y K G
Sbjct: 196 LESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGS 255
Query: 379 --------------------------LKFAEC-----VFGRINEKNMVSWNAIIAAYVQN 407
+K E VF EKN+V+W +I Y +N
Sbjct: 256 RDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRN 315
Query: 408 GRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTS 467
G E+AL F + + D ++L A + LA + K IH + +
Sbjct: 316 GDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVG 375
Query: 468 NAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIE 527
NA+V +YAKCGD++ A R F ++ K+LVSWNTM+ A+ +HG +++L+ M +GI+
Sbjct: 376 NALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIK 435
Query: 528 PNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQ 587
P+ TF+ LL++CS SGLV EG +F SM DY I ++H CM+D+ GR G+L AK
Sbjct: 436 PDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFGRGGHLAEAKD 495
Query: 588 FIEEMPLVPTA----RIWGSLLTASRNNNDIFFAEFAAKHILSHDNDNTGCYVLLANMYA 643
+ T W +LL A + +K + + +VLL+N+Y
Sbjct: 496 LATTYSSLVTDSSNNSSWETLLGACSTHWHTELGREVSKVLKIAEPSEEMSFVLLSNLYC 555
Query: 644 EAGRWEDVEQIKLVMKKKGLAKTVDCCTVESKGKSQKFINNNKSHQQAYMIYDVLDII 701
GRW++ E ++ M ++G+ KT C +E + F+ + SH + + + L+ +
Sbjct: 556 STGRWKEGEDVRREMVERGMKKTPGCSWIEVGNQVSTFVVGDSSHPRLEELSETLNCL 613
Score = 185 bits (470), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 152/567 (26%), Positives = 241/567 (42%), Gaps = 76/567 (13%)
Query: 63 LTRSLCEFVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGI 122
LT + SG + +A +F+ M + DT WN ++ +S GL QE I + ++ +
Sbjct: 7 LTSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDA 66
Query: 123 GIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFK--------- 173
D+++F ++ C L + G+K+ +I+ G + V NSLIDMY K
Sbjct: 67 KPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANK 126
Query: 174 -------------------FGFV-----EVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGL 209
F ++ E A VF MP R +WN M++G+ G
Sbjct: 127 VFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLE 186
Query: 210 KSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCC-VRGGKEIHCQVIRNGLELDIMVQTSL 268
L FKEML KPD + S + CS V G+ +H +++NG + + S+
Sbjct: 187 SCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSV 246
Query: 269 IDMYAKCGKVDYAER-------------------------------VFNEMTCKNIVAWN 297
+ Y K G D A R VF+ KNIV W
Sbjct: 247 LSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWT 306
Query: 298 AMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRK 357
MI GY NG ++ M + + D +L +CS L GK IHG I
Sbjct: 307 TMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHC 366
Query: 358 MFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELF 417
F + + ALV++Y KCG +K A+ FG I K++VSWN ++ A+ +G ++AL+L+
Sbjct: 367 GFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLY 426
Query: 418 HCLRNQTLKPDAVTIASILPAYAELATVSE-CKQIHAYITKLELSSNTFTSNAIVYMYAK 476
+ +KPD VT +L + V E C + + + ++ M+ +
Sbjct: 427 DNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFGR 486
Query: 477 CGDLQTARRYFDSMS-----FKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNES 531
G L A+ + S N SW T++ A + H + ++ +K EP+E
Sbjct: 487 GGHLAEAKDLATTYSSLVTDSSNNSSWETLLGACSTHWHTELGREVSKVLKI--AEPSEE 544
Query: 532 TFVSLLSS--CSISGLVNEGWELFNSM 556
LLS+ CS +G EG ++ M
Sbjct: 545 MSFVLLSNLYCS-TGRWKEGEDVRREM 570
Score = 143 bits (361), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 117/484 (24%), Positives = 203/484 (41%), Gaps = 64/484 (13%)
Query: 2 AVKLSHSYFFNSYKPDDASFK------------QMGAPKRDLLVNPRIRKSNPTKKQM-- 47
A+ L F+ KPDD SF + G + L++ S P +
Sbjct: 54 AIALFTQLRFSDAKPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLID 113
Query: 48 -----SETPKRGMI-------KPNSLSLTRSLCEFVDSGAMDNALYLFEKMNQPDTYIWN 95
S+T + N ++ L ++++ + AL +F +M + + WN
Sbjct: 114 MYGKCSDTLSANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWN 173
Query: 96 VIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLS-FIEGKKVHGKLIK 154
++I G ++ G + + + M D +TF ++ AC S + G+ VH ++K
Sbjct: 174 IMISGHAHCGKLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLK 233
Query: 155 IGLDRDIYV-------------------------------CNSLIDMYFKFGFVEVAEKV 183
G + NS+ID K G E A +V
Sbjct: 234 NGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEV 293
Query: 184 FEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCV 243
F P +++V+W M+ GY GDG ++L F EM+ G D + + L CS +
Sbjct: 294 FHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALL 353
Query: 244 RGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGY 303
GK IH +I G + V +L+++YAKCG + A+R F ++ K++V+WN M+ +
Sbjct: 354 GHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAF 413
Query: 304 AINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHL 363
++G ++ M + PD +T I LL +CS G + EG I ++ +P
Sbjct: 414 GVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLE 473
Query: 364 VLE-TALVDMYGKCGQLKFAECVFGR-----INEKNMVSWNAIIAAYVQNGRNEEALELF 417
V T ++DM+G+ G L A+ + + N SW ++ A + E E+
Sbjct: 474 VDHVTCMIDMFGRGGHLAEAKDLATTYSSLVTDSSNNSSWETLLGACSTHWHTELGREVS 533
Query: 418 HCLR 421
L+
Sbjct: 534 KVLK 537
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 87/356 (24%), Positives = 151/356 (42%), Gaps = 66/356 (18%)
Query: 260 LDIMVQ-TSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKR 318
+ ++V+ TS I AK G++ A +VF+ M + VAWN M+ Y+ G E+ +
Sbjct: 1 MSVLVRLTSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQ 60
Query: 319 MQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCG- 377
++ + PD + +L +C+ G + G+ I IR F L + +L+DMYGKC
Sbjct: 61 LRFSDAKPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSD 120
Query: 378 --------------------------------QLKFAECVFGRINEKNMVSWNAIIAAYV 405
Q + A VF + ++ +WN +I+ +
Sbjct: 121 TLSANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHA 180
Query: 406 QNGRNEEALELFHCLRNQTLKPDAVTIASILPA-YAELATVSECKQIHAYITKLELSSNT 464
G+ E L LF + KPD T +S++ A A+ + V + +HA + K SS
Sbjct: 181 HCGKLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAV 240
Query: 465 FTSNAIVYMYAKCGDLQTARRYFDSMSF-------------------------------K 493
N+++ Y K G A R +S+ K
Sbjct: 241 EAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEK 300
Query: 494 NLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEG 549
N+V+W TMI Y +G G +++ F M ++G++ + + ++L +CS L+ G
Sbjct: 301 NIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHG 356
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 73/137 (53%), Gaps = 2/137 (1%)
Query: 475 AKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFV 534
AK G + +AR+ FD M + V+WNTM+ +Y+ G +I LF++++ + +P++ +F
Sbjct: 15 AKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSFT 74
Query: 535 SLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPL 594
++LS+C+ G V G ++ S+ + + ++D+ G+ + +A + +M
Sbjct: 75 AILSTCASLGNVKFGRKI-QSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCC 133
Query: 595 VPTARI-WGSLLTASRN 610
+ W SLL A N
Sbjct: 134 DSRNEVTWCSLLFAYMN 150
>AT4G18520.1 | Symbols: | INVOLVED IN: biological_process unknown;
EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 9
growth stages; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT4G39530.1); Has
16698 Blast hits to 4567 proteins in 114 species: Archae
- 0; Bacteria - 4; Metazoa - 97; Fungi - 32; Plants -
16266; Viruses - 0; Other Eukaryotes - 299 (source: NCBI
BLink). | chr4:10215250-10217103 REVERSE
Length = 617
Score = 266 bits (680), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 149/468 (31%), Positives = 258/468 (55%), Gaps = 2/468 (0%)
Query: 74 GAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDN-FTFPFV 132
G + A +F+ M + +T W +I G+ GL E + GI N F +
Sbjct: 131 GDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVCL 190
Query: 133 IKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDL 192
+ C R F G++VHG ++K+G+ ++ V +SL+ Y + G + A + F+ M +D+
Sbjct: 191 LNLCSRRAEFELGRQVHGNMVKVGVG-NLIVESSLVYFYAQCGELTSALRAFDMMEEKDV 249
Query: 193 VSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQ 252
+SW +++ G G+K++ F ML P+ ++ S L CS +R G+++H
Sbjct: 250 ISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSL 309
Query: 253 VIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLES 312
V++ ++ D+ V TSL+DMYAKCG++ +VF+ M+ +N V W ++I +A G E+
Sbjct: 310 VVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEA 369
Query: 313 FTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDM 372
+ + M+ +LI + +T++++L +C G LL GK +H I+ ++ + + LV +
Sbjct: 370 ISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWL 429
Query: 373 YGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTI 432
Y KCG+ + A V ++ +++VSW A+I+ G EAL+ + + ++P+ T
Sbjct: 430 YCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTY 489
Query: 433 ASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSF 492
+S L A A ++ + IH+ K SN F +A+++MYAKCG + A R FDSM
Sbjct: 490 SSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPE 549
Query: 493 KNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSC 540
KNLVSW MIM YA +GF +++L RM+ G E ++ F ++LS+C
Sbjct: 550 KNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATILSTC 597
Score = 214 bits (545), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 124/452 (27%), Positives = 240/452 (53%), Gaps = 9/452 (1%)
Query: 146 KKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVI 205
K++H +K D+ IY N+LI + G + A KVF++MP ++ V+W M++GY
Sbjct: 102 KRIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKY 161
Query: 206 GDGLKSLMCFKEMLGLGEKPDRLSM-ISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMV 264
G ++ F++ + G + M + L CS G+++H +++ G+ +++V
Sbjct: 162 GLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVG-NLIV 220
Query: 265 QTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNL 324
++SL+ YA+CG++ A R F+ M K++++W A+I + GH +++ M
Sbjct: 221 ESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWF 280
Query: 325 IPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAEC 384
+P+ T+ ++L +CS+ L G+ +H +++M + + T+L+DMY KCG++
Sbjct: 281 LPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRK 340
Query: 385 VFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELAT 444
VF ++ +N V+W +IIAA+ + G EEA+ LF ++ + L + +T+ SIL A +
Sbjct: 341 VFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGA 400
Query: 445 VSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMA 504
+ K++HA I K + N + + +V++Y KCG+ + A + +++VSW MI
Sbjct: 401 LLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISG 460
Query: 505 YAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDY---N 561
+ G + ++ M Q G+EPN T+ S L +C+ S + G + + K ++ N
Sbjct: 461 CSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSN 520
Query: 562 IDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMP 593
+ G ++ + + G + A + + MP
Sbjct: 521 VFVG----SALIHMYAKCGFVSEAFRVFDSMP 548
Score = 196 bits (498), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 113/373 (30%), Positives = 197/373 (52%)
Query: 70 FVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTF 129
+ G + +AL F+ M + D W +I S KG + I + M + FT
Sbjct: 228 YAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTV 287
Query: 130 PFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPL 189
++KAC + G++VH ++K + D++V SL+DMY K G + KVF+ M
Sbjct: 288 CSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSN 347
Query: 190 RDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEI 249
R+ V+W ++ + G G +++ F+ M + L+++S L C + GKE+
Sbjct: 348 RNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKEL 407
Query: 250 HCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHF 309
H Q+I+N +E ++ + ++L+ +Y KCG+ A V ++ +++V+W AMI G + GH
Sbjct: 408 HAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHE 467
Query: 310 LESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETAL 369
E+ LK M ++ + P+ T + L +C+ +LL G+ IH A + L ++ + +AL
Sbjct: 468 SEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSAL 527
Query: 370 VDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDA 429
+ MY KCG + A VF + EKN+VSW A+I Y +NG EAL+L + + + + D
Sbjct: 528 IHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDD 587
Query: 430 VTIASILPAYAEL 442
A+IL ++
Sbjct: 588 YIFATILSTCGDI 600
Score = 159 bits (402), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 157/294 (53%)
Query: 45 KQMSETPKRGMIKPNSLSLTRSLCEFVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNK 104
+Q+ + MIK + T + + G + + +F+ M+ +T W II + +
Sbjct: 304 RQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHARE 363
Query: 105 GLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVC 164
G +E I + M+ + +N T +++ACG + + + GK++H ++IK +++++Y+
Sbjct: 364 GFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIG 423
Query: 165 NSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEK 224
++L+ +Y K G A V + +P RD+VSW M++G +G ++L KEM+ G +
Sbjct: 424 STLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVE 483
Query: 225 PDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERV 284
P+ + S+L C+ + G+ IH +N ++ V ++LI MYAKCG V A RV
Sbjct: 484 PNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRV 543
Query: 285 FNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSC 338
F+ M KN+V+W AMI GYA NG E+ + RM+ + D +L +C
Sbjct: 544 FDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATILSTC 597
>AT3G58590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:21666262-21668487 FORWARD
Length = 741
Score = 265 bits (678), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 172/587 (29%), Positives = 286/587 (48%), Gaps = 39/587 (6%)
Query: 52 KRGMIKPNSLSLTRSLCEFVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVI 111
K G+ ++ T LC + ++ A +FE M WN ++ ++G +E +
Sbjct: 141 KYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECM 200
Query: 112 DFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMY 171
F+ + G + +F V+K + K++H K GLD +I V NSLI Y
Sbjct: 201 FFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVVNSLISAY 260
Query: 172 FKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMI 231
K G +AE++F+ D+VSWN ++ + LK+L F M G P++ + +
Sbjct: 261 GKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYV 320
Query: 232 SSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCK 291
S LG S+ + G++IH +I+NG E I++ +LID YAKCG ++ + F+ + K
Sbjct: 321 SVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDK 380
Query: 292 NIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIH 351
NIV WNA++ GYA N + +M + P T L SC + E + +H
Sbjct: 381 NIVCWNALLSGYA-NKDGPICLSLFLQMLQMGFRPTEYTFSTALKSC----CVTELQQLH 435
Query: 352 GYAIR--------------KMFLPHLVLETALV------------------DMYGKCGQL 379
+R + + + ++ AL+ +Y + GQ
Sbjct: 436 SVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQY 495
Query: 380 KFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAY 439
+ + + + + VSWN IAA ++ +EE +ELF + ++PD T SIL
Sbjct: 496 HESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLC 555
Query: 440 AELATVSECKQIHAYITKLELS-SNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSW 498
++L ++ IH ITK + S ++TF N ++ MY KCG +++ + F+ KNL++W
Sbjct: 556 SKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLITW 615
Query: 499 NTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKM 558
+I IHG+G +++ F G +P+ +F+S+L++C G+V EG LF MK
Sbjct: 616 TALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEGMGLFQKMK- 674
Query: 559 DYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLL 605
DY ++ ++HY C VDLL R G L A+ I EMP A +W + L
Sbjct: 675 DYGVEPEMDHYRCAVDLLARNGYLKEAEHLIREMPFPADAPVWRTFL 721
Score = 197 bits (501), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 153/559 (27%), Positives = 262/559 (46%), Gaps = 56/559 (10%)
Query: 74 GAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVI 133
G + A +F++M + + +N II+G+S G + + M Y G + T ++
Sbjct: 63 GEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLL 122
Query: 134 KACGRLLSFIEGKKVHGKLIKIGL-DRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDL 192
L G ++HG +K GL D +V L+ +Y + +E+AE+VFE MP + L
Sbjct: 123 SCAS--LDVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSL 180
Query: 193 VSWNCMVN--GYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRG---GK 247
+WN M++ G+R G + + F+E++ +G S + L G S CV+ K
Sbjct: 181 ETWNHMMSLLGHR--GFLKECMFFFRELVRMGASLTESSFLGVLKGVS---CVKDLDISK 235
Query: 248 EIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAING 307
++HC + GL+ +I V SLI Y KCG AER+F + +IV+WNA+I A +
Sbjct: 236 QLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSE 295
Query: 308 HFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLET 367
+ L++ M E P+ T +++L S L G+ IHG I+ +VL
Sbjct: 296 NPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGN 355
Query: 368 ALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKP 427
AL+D Y KCG L+ + F I +KN+V WNA+++ Y N L LF + +P
Sbjct: 356 ALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYA-NKDGPICLSLFLQMLQMGFRP 414
Query: 428 DAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKC---------- 477
T ++ L + V+E +Q+H+ I ++ N + ++++ YAK
Sbjct: 415 TEYTFSTALKS----CCVTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLL 470
Query: 478 ----------------------GDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISI 515
G + + ++ + VSWN I A + + I
Sbjct: 471 DWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVI 530
Query: 516 QLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSM-KMDYNIDYGIEHYGC--M 572
+LF M Q+ I P++ TFVS+LS CS + G + + K D++ + + C +
Sbjct: 531 ELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSC---ADTFVCNVL 587
Query: 573 VDLLGRTGNLDAAKQFIEE 591
+D+ G+ G++ + + EE
Sbjct: 588 IDMYGKCGSIRSVMKVFEE 606
Score = 196 bits (498), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 132/417 (31%), Positives = 210/417 (50%), Gaps = 6/417 (1%)
Query: 132 VIKACGRLLSFIEGKKVHGKLIKIG--LDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPL 189
++ C + SF K +H I + L + +YVCN++I +Y K G V +A KVF+ MP
Sbjct: 18 LLNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIISLYEKLGEVSLAGKVFDQMPE 77
Query: 190 RDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEI 249
R+ VS+N ++ GY GD K+ F EM G P++ S +S L C+ VR G ++
Sbjct: 78 RNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQ-STVSGLLSCA-SLDVRAGTQL 135
Query: 250 HCQVIRNGLEL-DIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGH 308
H ++ GL + D V T L+ +Y + ++ AE+VF +M K++ WN M+ G
Sbjct: 136 HGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHRGF 195
Query: 309 FLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETA 368
E + + + + +L S L K +H A +K + + +
Sbjct: 196 LKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVVNS 255
Query: 369 LVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPD 428
L+ YGKCG AE +F ++VSWNAII A ++ +AL+LF + P+
Sbjct: 256 LISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFSPN 315
Query: 429 AVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFD 488
T S+L + + +S +QIH + K + NA++ YAKCG+L+ +R FD
Sbjct: 316 QGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFD 375
Query: 489 SMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGL 545
+ KN+V WN ++ YA + G I + LF +M Q G P E TF + L SC ++ L
Sbjct: 376 YIRDKNIVCWNALLSGYA-NKDGPICLSLFLQMLQMGFRPTEYTFSTALKSCCVTEL 431
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 88/178 (49%), Gaps = 7/178 (3%)
Query: 432 IASILPAYAELATVSECKQIHAYITKL--ELSSNTFTSNAIVYMYAKCGDLQTARRYFDS 489
+ S+L + + + K +HA L L + N I+ +Y K G++ A + FD
Sbjct: 15 VVSLLNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIISLYEKLGEVSLAGKVFDQ 74
Query: 490 MSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEG 549
M +N VS+NT+I Y+ +G + +FS M+ G PN+ST LLS S+ V G
Sbjct: 75 MPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLLSCASLD--VRAG 132
Query: 550 WELFNSMKMDYNIDYGIEHYG-CMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLT 606
+L + + + Y + G C++ L GR L+ A+Q E+MP + W +++
Sbjct: 133 TQL-HGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPF-KSLETWNHMMS 188
>AT1G28690.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:10080042-10081604 REVERSE
Length = 520
Score = 265 bits (677), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 154/462 (33%), Positives = 255/462 (55%), Gaps = 38/462 (8%)
Query: 244 RGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGY 303
+ GK+IH +I+ G + D+ + L+ ++ KCG + YA +VF+E+ + A+N MI GY
Sbjct: 51 KAGKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGY 110
Query: 304 AINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGT---LLEGKC--IHGYAIRKM 358
+G E ++RM D T+ +L + + G+ L C +H I+
Sbjct: 111 LKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCD 170
Query: 359 FLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFH 418
VL TALVD Y K G+L+ A VF + ++N+V ++I+ Y+ G E+A E+F+
Sbjct: 171 VELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFN 230
Query: 419 CLR-----------------NQTLK---------------PDAVTIASILPAYAELATVS 446
+ +T K P+ T AS++ A + L +
Sbjct: 231 TTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHE 290
Query: 447 ECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYA 506
+Q+HA I K + ++ ++++ MYAKCG + ARR FD M KN+ SW +MI Y
Sbjct: 291 VGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYG 350
Query: 507 IHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGI 566
+G +++LF+RMK+ IEPN TF+ LS+CS SGLV++G+E+F SM+ DY++ +
Sbjct: 351 KNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKM 410
Query: 567 EHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTASRNNNDIFFAEFAAKHILS 626
EHY C+VDL+GR G+L+ A +F MP P + IW +LL++ + ++ A AA +
Sbjct: 411 EHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVELASIAASELFK 470
Query: 627 HDND-NTGCYVLLANMYAEAGRWEDVEQIKLVMKKKGLAKTV 667
+ D G Y+ L+N+YA +W++V +I+ VMK++ ++KT+
Sbjct: 471 LNADKRPGAYLALSNVYASNDKWDNVSKIREVMKRRRISKTI 512
Score = 163 bits (412), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 115/425 (27%), Positives = 204/425 (48%), Gaps = 52/425 (12%)
Query: 74 GAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVI 133
G + A +F+++ +P +N +I G+ GL +E++ RM Y G D +T V+
Sbjct: 83 GCLSYARQVFDELPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTLSMVL 142
Query: 134 KACGR-----LLSFIEGKKVHGKLIKIGL------------------------------- 157
KA +L + VH ++IK +
Sbjct: 143 KASNSRGSTMILPRSLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETMK 202
Query: 158 DRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLK-SLMCFK 216
D ++ C S+I Y GFVE AE++F ++D+V +N MV G+ G+ K S+ +
Sbjct: 203 DENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYI 262
Query: 217 EMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCG 276
M G P+ + S +G CS+ G+++H Q++++G+ I + +SL+DMYAKCG
Sbjct: 263 SMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCG 322
Query: 277 KVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLP 336
++ A RVF++M KN+ +W +MI GY NG+ E+ RM+E + P+ +T + L
Sbjct: 323 GINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALS 382
Query: 337 SCSKFGTLLEGKCIHGYAIRKMFL-PHLVLETALVDMYGKCGQL----KFAECVFGRINE 391
+CS G + +G I R + P + +VD+ G+ G L +FA + R +
Sbjct: 383 ACSHSGLVDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPERPDS 442
Query: 392 KNMVSWNAIIAAYVQNGRNE----EALELFHCLRNQTLKPDA-VTIASILPAYAELATVS 446
W A++++ +G E A ELF N +P A + ++++ + + VS
Sbjct: 443 D---IWAALLSSCNLHGNVELASIAASELFKL--NADKRPGAYLALSNVYASNDKWDNVS 497
Query: 447 ECKQI 451
+ +++
Sbjct: 498 KIREV 502
Score = 152 bits (384), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 110/404 (27%), Positives = 194/404 (48%), Gaps = 39/404 (9%)
Query: 145 GKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRV 204
GKK+H +IK G D+ + L+ ++ K G + A +VF+ +P L ++N M++GY
Sbjct: 53 GKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGYLK 112
Query: 205 IGDGLKSLMCFKEMLGLGEKPD--RLSMI---SSLGGCSIGCCVRGGKEIHCQVIRNGLE 259
G + L+ + M GEK D LSM+ S+ G ++ + +H ++I+ +E
Sbjct: 113 HGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCDVE 172
Query: 260 LDIMVQTSLIDMYAKCGK-------------------------------VDYAERVFNEM 288
LD ++ T+L+D Y K GK V+ AE +FN
Sbjct: 173 LDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTT 232
Query: 289 TCKNIVAWNAMIGGYAINGHFLE-SFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEG 347
K+IV +NAM+ G++ +G + S MQ P+ T +++ +CS + G
Sbjct: 233 KVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVG 292
Query: 348 KCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQN 407
+ +H ++ H+ + ++L+DMY KCG + A VF ++ EKN+ SW ++I Y +N
Sbjct: 293 QQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKN 352
Query: 408 GRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITK-LELSSNTFT 466
G EEALELF ++ ++P+ VT L A + V + +I + + +
Sbjct: 353 GNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKMEH 412
Query: 467 SNAIVYMYAKCGDLQTARRYFDSMSFK-NLVSWNTMIMAYAIHG 509
IV + + GDL A + +M + + W ++ + +HG
Sbjct: 413 YACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHG 456
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 132/270 (48%), Gaps = 7/270 (2%)
Query: 44 KKQMSETPKRGMIKPNSLSLTRSLCEFVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSN 103
K + + T M N + T + +++ G +++A +F D ++N ++ GFS
Sbjct: 190 KLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSR 249
Query: 104 KG-LFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIY 162
G + +D Y M+ G + TF VI AC L S G++VH +++K G+ I
Sbjct: 250 SGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIK 309
Query: 163 VCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLG 222
+ +SL+DMY K G + A +VF+ M +++ SW M++GY G+ ++L F M
Sbjct: 310 MGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFR 369
Query: 223 EKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRN-GLELDIMVQTSLIDMYAKCGKVDYA 281
+P+ ++ + +L CS V G EI + R+ ++ + ++D+ + G ++ A
Sbjct: 370 IEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKA 429
Query: 282 ---ERVFNEMTCKNIVAWNAMIGGYAINGH 308
R E +I W A++ ++G+
Sbjct: 430 FEFARAMPERPDSDI--WAALLSSCNLHGN 457
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 75/173 (43%), Gaps = 5/173 (2%)
Query: 424 TLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTA 483
+L P A IA L + K+IHA I K + S ++ ++ KCG L A
Sbjct: 30 SLSP-AKYIAGALQEHINSPAPKAGKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYA 88
Query: 484 RRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSIS 543
R+ FD + L ++N MI Y HG + L RM +G + + T +L + +
Sbjct: 89 RQVFDELPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSR 148
Query: 544 G----LVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEM 592
G L L ++ + +++ +VD ++G L++A+ E M
Sbjct: 149 GSTMILPRSLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETM 201
>AT1G62260.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:22997826-22999796 REVERSE
Length = 656
Score = 264 bits (674), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 179/632 (28%), Positives = 305/632 (48%), Gaps = 44/632 (6%)
Query: 65 RSLCEFVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGI 124
+ L + + SG + A +FEK+ +T WN +I G+ + + + M +
Sbjct: 45 KELNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVVT 104
Query: 125 DNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVF 184
N + +CG + E +K+ ++ RD + N++I Y K + A +F
Sbjct: 105 WNTMISGYV-SCGGIRFLEEARKLFDEMPS----RDSFSWNTMISGYAKNRRIGEALLLF 159
Query: 185 EAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKP-----------DRLSMISS 233
E MP R+ VSW+ M+ G+ G+ +++ F++M P +RLS +
Sbjct: 160 EKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAW 219
Query: 234 LGGCSIGCCVRGGKEI----HCQVIRNGLELDIMVQTSLIDMYAK-CGKVDYAERVFNEM 288
+ G G V G +++ + ++ G + L D CG E F E
Sbjct: 220 VLG-QYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGE--FRER 276
Query: 289 TCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIP-----DAITMINLLPSCSKFGT 343
CKN+V+WN+MI Y G + + +M++ + I D ++ + +
Sbjct: 277 FCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFS 336
Query: 344 LLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAA 403
+ + H + + +V Y G ++ A F + EK+ VSWN+IIAA
Sbjct: 337 EMPNRDAHSWNM-------------MVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAA 383
Query: 404 YVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSN 463
Y +N +EA++LF + + KPD T+ S+L A L + Q+H + K + +
Sbjct: 384 YEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVIP-D 442
Query: 464 TFTSNAIVYMYAKCGDLQTARRYFDSMSFK-NLVSWNTMIMAYAIHGFGTISIQLFSRMK 522
NA++ MY++CG++ +RR FD M K +++WN MI YA HG + ++ LF MK
Sbjct: 443 VPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMK 502
Query: 523 QNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNL 582
NGI P+ TFVS+L++C+ +GLV+E F SM Y I+ +EHY +V++ G
Sbjct: 503 SNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQF 562
Query: 583 DAAKQFIEEMPLVPTARIWGSLLTASRNNNDIFFAEFAAKHILSHDNDNTGCYVLLANMY 642
+ A I MP P +WG+LL A R N++ A AA+ + + +++ YVLL NMY
Sbjct: 563 EEAMYIITSMPFEPDKTVWGALLDACRIYNNVGLAHVAAEAMSRLEPESSTPYVLLYNMY 622
Query: 643 AEAGRWEDVEQIKLVMKKKGLAKTVDCCTVES 674
A+ G W++ Q+++ M+ K + K V+S
Sbjct: 623 ADMGLWDEASQVRMNMESKRIKKERGSSWVDS 654
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 130/559 (23%), Positives = 243/559 (43%), Gaps = 75/559 (13%)
Query: 37 IRKSNPTKKQMSETPKRGMIKPNSLSLTRSLCEFVDSGAMDNALYLFEKMNQPDTYIWNV 96
IR +K E P R +S S + + + + AL LFEKM + + W+
Sbjct: 118 IRFLEEARKLFDEMPSR-----DSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSWSA 172
Query: 97 IIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKV-------- 148
+I GF G + + +M + + P C + I+ +++
Sbjct: 173 MITGFCQNGEVDSAVVLFRKMPVKD------SSPL----CALVAGLIKNERLSEAAWVLG 222
Query: 149 -HGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMP---------------LRDL 192
+G L+ G + +Y N+LI Y + G VE A +F+ +P +++
Sbjct: 223 QYGSLVS-GREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNV 281
Query: 193 VSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQ 252
VSWN M+ Y +GD + + + F +M + D +S + + G +H
Sbjct: 282 VSWNSMIKAYLKVGDVVSARLLFDQM----KDRDTISWNTMIDGY-----------VHVS 326
Query: 253 VIRNGLEL-------DIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAI 305
+ + L D ++ YA G V+ A F + K+ V+WN++I Y
Sbjct: 327 RMEDAFALFSEMPNRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEK 386
Query: 306 NGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVL 365
N + E+ RM + PD T+ +LL + + L G +H + K +P + +
Sbjct: 387 NKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVV-KTVIPDVPV 445
Query: 366 ETALVDMYGKCGQLKFAECVFGRIN-EKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQT 424
AL+ MY +CG++ + +F + ++ +++WNA+I Y +G EAL LF +++
Sbjct: 446 HNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNG 505
Query: 425 LKPDAVTIASILPAYAELATVSECK-QIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTA 483
+ P +T S+L A A V E K Q + ++ ++ +++V + + G + A
Sbjct: 506 IYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEA 565
Query: 484 RRYFDSMSFK-NLVSWNTMIMAYAIH---GFGTISIQLFSRMKQNGIEPNEST-FVSLLS 538
SM F+ + W ++ A I+ G ++ + SR+ EP ST +V L +
Sbjct: 566 MYIITSMPFEPDKTVWGALLDACRIYNNVGLAHVAAEAMSRL-----EPESSTPYVLLYN 620
Query: 539 SCSISGLVNEGWELFNSMK 557
+ GL +E ++ +M+
Sbjct: 621 MYADMGLWDEASQVRMNME 639
>AT1G64310.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23866053-23867711 FORWARD
Length = 552
Score = 263 bits (673), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 156/511 (30%), Positives = 266/511 (52%), Gaps = 1/511 (0%)
Query: 146 KKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVI 205
+K+H + K L RD Y L Y + A K+F+ P R + WN ++ Y
Sbjct: 25 QKLHSFVTKSKLARDPYFATQLARFYALNDDLISARKLFDVFPERSVFLWNSIIRAYAKA 84
Query: 206 GDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQ 265
L F ++L +PD + G S +G + IH I +GL D +
Sbjct: 85 HQFTTVLSLFSQILRSDTRPDNFTYACLARGFSESFDTKGLRCIHGIAIVSGLGFDQICG 144
Query: 266 TSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLI 325
++++ Y+K G + A ++F + ++ WN MI GY G + + MQ
Sbjct: 145 SAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQ 204
Query: 326 PDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECV 385
P+ TM+ L LL +H + ++ H + ALV+MY +C + A V
Sbjct: 205 PNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSV 264
Query: 386 FGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATV 445
F I+E ++V+ +++I Y + G ++EAL LF LR KPD V +A +L + AEL+
Sbjct: 265 FNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDS 324
Query: 446 SECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAY 505
K++H+Y+ +L L + +A++ MY+KCG L+ A F + KN+VS+N++I+
Sbjct: 325 VSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILGL 384
Query: 506 AIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYG 565
+HGF + + + F+ + + G+ P+E TF +LL +C SGL+N+G E+F MK ++ I+
Sbjct: 385 GLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEIFERMKSEFGIEPQ 444
Query: 566 IEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTASRNNNDIFFAEFAAKHIL 625
EHY MV L+G G L+ A +F+ + + I G+LL+ + + AE A++I
Sbjct: 445 TEHYVYMVKLMGMAGKLEEAFEFVMSLQKPIDSGILGALLSCCEVHENTHLAEVVAENIH 504
Query: 626 SHDNDNTGCY-VLLANMYAEAGRWEDVEQIK 655
+ + Y V+L+N+YA GRW++VE+++
Sbjct: 505 KNGEERRSVYKVMLSNVYARYGRWDEVERLR 535
Score = 156 bits (394), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 100/359 (27%), Positives = 176/359 (49%)
Query: 78 NALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACG 137
+A LF+ + ++WN IIR ++ F V+ + ++ DNFT+ + +
Sbjct: 58 SARKLFDVFPERSVFLWNSIIRAYAKAHQFTTVLSLFSQILRSDTRPDNFTYACLARGFS 117
Query: 138 RLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNC 197
+ +HG I GL D ++++ Y K G + A K+F ++P DL WN
Sbjct: 118 ESFDTKGLRCIHGIAIVSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNV 177
Query: 198 MVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNG 257
M+ GY G K + F M G +P+ +M++ G + +H ++
Sbjct: 178 MILGYGCCGFWDKGINLFNLMQHRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKIN 237
Query: 258 LELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLK 317
L+ V +L++MY++C + A VFN ++ ++VA +++I GY+ G+ E+
Sbjct: 238 LDSHSYVGCALVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFA 297
Query: 318 RMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCG 377
++ PD + + +L SC++ + GK +H Y IR + + +AL+DMY KCG
Sbjct: 298 ELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCG 357
Query: 378 QLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASIL 436
LK A +F I EKN+VS+N++I +G A E F + L PD +T +++L
Sbjct: 358 LLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALL 416
Score = 144 bits (362), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 92/279 (32%), Positives = 148/279 (53%)
Query: 70 FVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTF 129
+ +G + A LF + PD +WNV+I G+ G + + I+ ++ M++ G + +T
Sbjct: 151 YSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQPNCYTM 210
Query: 130 PFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPL 189
+ + VH +KI LD YV +L++MY + + A VF ++
Sbjct: 211 VALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSVFNSISE 270
Query: 190 RDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEI 249
DLV+ + ++ GY G+ ++L F E+ G+KPD + + LG C+ GKE+
Sbjct: 271 PDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEV 330
Query: 250 HCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHF 309
H VIR GLELDI V ++LIDMY+KCG + A +F + KNIV++N++I G ++G
Sbjct: 331 HSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFA 390
Query: 310 LESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGK 348
+F + E LIPD IT LL +C G L +G+
Sbjct: 391 STAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQ 429
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 92/172 (53%)
Query: 78 NALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACG 137
+A +F +++PD + +I G+S G +E + + + G D V+ +C
Sbjct: 260 SACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCA 319
Query: 138 RLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNC 197
L + GK+VH +I++GL+ DI VC++LIDMY K G ++ A +F +P +++VS+N
Sbjct: 320 ELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNS 379
Query: 198 MVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEI 249
++ G + G + F E+L +G PD ++ + L C + G+EI
Sbjct: 380 LILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEI 431
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 103/240 (42%), Gaps = 3/240 (1%)
Query: 340 KFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNA 399
K T L + +H + + T L Y L A +F E+++ WN+
Sbjct: 17 KIQTRLNTQKLHSFVTKSKLARDPYFATQLARFYALNDDLISARKLFDVFPERSVFLWNS 76
Query: 400 IIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLE 459
II AY + + L LF + +PD T A + ++E + IH
Sbjct: 77 IIRAYAKAHQFTTVLSLFSQILRSDTRPDNFTYACLARGFSESFDTKGLRCIHGIAIVSG 136
Query: 460 LSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFS 519
L + +AIV Y+K G + A + F S+ +L WN MI+ Y GF I LF+
Sbjct: 137 LGFDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFN 196
Query: 520 RMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGC-MVDLLGR 578
M+ G +PN T V+L S L+ W + ++ + N+D + GC +V++ R
Sbjct: 197 LMQHRGHQPNCYTMVALTSGLIDPSLLLVAWSV-HAFCLKINLD-SHSYVGCALVNMYSR 254
>AT5G15300.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:4968384-4970030 REVERSE
Length = 548
Score = 263 bits (673), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 165/535 (30%), Positives = 274/535 (51%), Gaps = 47/535 (8%)
Query: 146 KKVHGKLIKIGLDRDIYVCNSLI--DMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYR 203
K++H ++ GL ++ V LI G ++ A K+F+ +P D+ N ++ G
Sbjct: 29 KQIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFDEIPKPDVSICNHVLRGSA 88
Query: 204 VIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIM 263
K++ + EM G PDR + L CS G H +V+R+G L+
Sbjct: 89 QSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHGFVLNEY 148
Query: 264 VQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDN 323
V+ +LI +A CG + A +F++ + VAW++M GYA G E+ M +
Sbjct: 149 VKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPYKD 208
Query: 324 LIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAE 383
+ + ++ G C+ KC ++ A
Sbjct: 209 QVA--------------WNVMITG-CL------------------------KCKEMDSAR 229
Query: 384 CVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELA 443
+F R EK++V+WNA+I+ YV G +EAL +F +R+ PD VTI S+L A A L
Sbjct: 230 ELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLG 289
Query: 444 TVSECKQIHAYITKL-ELSSNTFTS----NAIVYMYAKCGDLQTARRYFDSMSFKNLVSW 498
+ K++H YI + +SS+ + NA++ MYAKCG + A F + ++L +W
Sbjct: 290 DLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTW 349
Query: 499 NTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKM 558
NT+I+ A+H SI++F M++ + PNE TF+ ++ +CS SG V+EG + F+ M+
Sbjct: 350 NTLIVGLALH-HAEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRD 408
Query: 559 DYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTASRNNNDIFFAE 618
YNI+ I+HYGCMVD+LGR G L+ A F+E M + P A +W +LL A + ++ +
Sbjct: 409 MYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGACKIYGNVELGK 468
Query: 619 FAAKHILSHDNDNTGCYVLLANMYAEAGRWEDVEQIKLVMKKKGLAKTVDCCTVE 673
+A + +LS D +G YVLL+N+YA G+W+ V++++ + + K +E
Sbjct: 469 YANEKLLSMRKDESGDYVLLSNIYASTGQWDGVQKVRKMFDDTRVKKPTGVSLIE 523
Score = 154 bits (390), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 110/400 (27%), Positives = 186/400 (46%), Gaps = 72/400 (18%)
Query: 74 GAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVI 133
GA+ A LF+++ +PD I N ++RG + ++ + Y ME G+ D +TF FV+
Sbjct: 60 GALKYAHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVL 119
Query: 134 KACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLI-------DM---------------- 170
KAC +L G HGK+++ G + YV N+LI D+
Sbjct: 120 KACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKV 179
Query: 171 --------YFKFGFVEVAEKVFEAMPL-------------------------------RD 191
Y K G ++ A ++F+ MP +D
Sbjct: 180 AWSSMTSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKD 239
Query: 192 LVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHC 251
+V+WN M++GY G ++L FKEM GE PD ++++S L C++ + GK +H
Sbjct: 240 VVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHI 299
Query: 252 QV-----IRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAIN 306
+ + + + + + +LIDMYAKCG +D A VF + +++ WN +I G A++
Sbjct: 300 YILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALH 359
Query: 307 GHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMF--LPHLV 364
H S + MQ + P+ +T I ++ +CS G + EG+ +R M+ P++
Sbjct: 360 -HAEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSL-MRDMYNIEPNIK 417
Query: 365 LETALVDMYGKCGQLKFAECVFGRIN-EKNMVSWNAIIAA 403
+VDM G+ GQL+ A + E N + W ++ A
Sbjct: 418 HYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGA 457
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 118/241 (48%), Gaps = 10/241 (4%)
Query: 76 MDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKA 135
MD+A LF++ + D WN +I G+ N G +E + + M G D T ++ A
Sbjct: 225 MDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSA 284
Query: 136 CGRLLSFIEGKKVHGKLIKIG-LDRDIYV----CNSLIDMYFKFGFVEVAEKVFEAMPLR 190
C L GK++H +++ + IYV N+LIDMY K G ++ A +VF + R
Sbjct: 285 CAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDR 344
Query: 191 DLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIH 250
DL +WN ++ G + S+ F+EM L P+ ++ I + CS V G++ +
Sbjct: 345 DLSTWNTLIVGL-ALHHAEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRK-Y 402
Query: 251 CQVIRN--GLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCK-NIVAWNAMIGGYAING 307
++R+ +E +I ++DM + G+++ A M + N + W ++G I G
Sbjct: 403 FSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGACKIYG 462
Query: 308 H 308
+
Sbjct: 463 N 463
>AT1G23450.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:8324698-8326697 FORWARD
Length = 666
Score = 263 bits (671), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 169/616 (27%), Positives = 317/616 (51%), Gaps = 6/616 (0%)
Query: 58 PNSLSLT--RSLCEFVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYH 115
P+ L T R + E + SG + +A F++M+ D +N++I G S G I+ Y
Sbjct: 42 PSDLVYTHNRRIDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYA 101
Query: 116 RMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFG 175
M G+ TFP V+ C L EG +VH ++I +G +++V ++L+ +Y
Sbjct: 102 EMVSCGLRESASTFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLR 161
Query: 176 FVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLG 235
V+VA K+F+ M R+L N ++ + G+ + + M G + L+ +
Sbjct: 162 LVDVALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIR 221
Query: 236 GCSIGCCVRGGKEIHCQVIRNGLEL-DIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIV 294
GCS V GK++H V+++G + +I V L+D Y+ CG + + R FN + K+++
Sbjct: 222 GCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVI 281
Query: 295 AWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYA 354
+WN+++ A G L+S +MQ P ++ L CS+ + GK IH Y
Sbjct: 282 SWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYV 341
Query: 355 IRKMF-LPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEA 413
++ F + L +++AL+DMYGKC ++ + ++ + N+ N+++ + + G ++
Sbjct: 342 LKMGFDVSSLHVQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDI 401
Query: 414 LELFHCLRNQTLKPDAVTIASILPAYAEL--ATVSECKQIHAYITKLELSSNTFTSNAIV 471
+E+F + ++ D VT++++L A + ++ C +H K +++ S +++
Sbjct: 402 IEMFGLMIDEGTGIDEVTLSTVLKALSLSLPESLHSCTLVHCCAIKSGYAADVAVSCSLI 461
Query: 472 YMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNES 531
Y K G + +R+ FD + N+ ++I YA +G GT +++ M + + P+E
Sbjct: 462 DAYTKSGQNEVSRKVFDELDTPNIFCLTSIINGYARNGMGTDCVKMLREMDRMNLIPDEV 521
Query: 532 TFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEE 591
T +S+LS CS SGLV EG +F+S++ Y I G + Y CMVDLLGR G ++ A++ + +
Sbjct: 522 TILSVLSGCSHSGLVEEGELIFDSLESKYGISPGRKLYACMVDLLGRAGLVEKAERLLLQ 581
Query: 592 MPLVPTARIWGSLLTASRNNNDIFFAEFAAKHILSHDNDNTGCYVLLANMYAEAGRWEDV 651
W SLL + R + + AA+ +++ + +N Y+ ++ Y E G +E
Sbjct: 582 ARGDADCVAWSSLLQSCRIHRNETIGRRAAEVLMNLEPENFAVYIQVSKFYFEIGDFEIS 641
Query: 652 EQIKLVMKKKGLAKTV 667
QI+ + + L + +
Sbjct: 642 RQIREIAASRELMREI 657
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD
Length = 761
Score = 262 bits (670), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 195/670 (29%), Positives = 319/670 (47%), Gaps = 69/670 (10%)
Query: 36 RIRKSNPTKKQMSETPKRGMIKPNSLSLTRSLCEFVDSGAMDNALYLFEKMNQPDTYIWN 95
+ R+ N E PK N +S T L D G ++A+ LF++M + + WN
Sbjct: 120 KCRRMNEAWTLFREMPK------NVVSWTVMLTALCDDGRSEDAVELFDEMPERNVVSWN 173
Query: 96 VIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKI 155
++ G G ++ + M D ++ +IK E K + G +
Sbjct: 174 TLVTGLIRNGDMEKAKQVFDAMPSR----DVVSWNAMIKGYIENDGMEEAKLLFGDMS-- 227
Query: 156 GLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCF 215
++++ S++ Y ++G V A ++F MP R++VSW M++G+ ++LM F
Sbjct: 228 --EKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLF 285
Query: 216 KEMLGLGE--KPDRLSMISSLGGCSIGCCV---RGGKEIHCQVIRNGLEL---DIMVQTS 267
EM + P+ ++IS C G V R G+++H QVI NG E D + S
Sbjct: 286 LEMKKDVDAVSPNGETLISLAYACG-GLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKS 344
Query: 268 LIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPD 327
L+ MYA G + A+ + NE ++ + N +I Y NG + T +R++ + D
Sbjct: 345 LVHMYASSGLIASAQSLLNESF--DLQSCNIIINRYLKNGDLERAETLFERVKS---LHD 399
Query: 328 AITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFG 387
++ T+++D Y + G + A +F
Sbjct: 400 KVSW-----------------------------------TSMIDGYLEAGDVSRAFGLFQ 424
Query: 388 RINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSE 447
++++K+ V+W +I+ VQN EA L + LKP T + +L + + + +
Sbjct: 425 KLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQ 484
Query: 448 CKQIHAYITKLE--LSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAY 505
K IH I K + N++V MYAKCG ++ A F M K+ VSWN+MIM
Sbjct: 485 GKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGL 544
Query: 506 AIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYG 565
+ HG ++ LF M +G +PN TF+ +LS+CS SGL+ G ELF +MK Y+I G
Sbjct: 545 SHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPG 604
Query: 566 IEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTAS----RNNNDIFFAEFAA 621
I+HY M+DLLGR G L A++FI +P P ++G+LL R+ + AE AA
Sbjct: 605 IDHYISMIDLLGRAGKLKEAEEFISALPFTPDHTVYGALLGLCGLNWRDKDAEGIAERAA 664
Query: 622 KHILSHDNDNTGCYVLLANMYAEAGRWEDVEQIKLVMKKKGLAKTVDCCTVESKGKSQKF 681
+L D N +V L N+YA GR + ++++ M KG+ KT C V G++ F
Sbjct: 665 MRLLELDPVNAPGHVALCNVYAGLGRHDMEKEMRKEMGIKGVKKTPGCSWVVVNGRANVF 724
Query: 682 INNNKSHQQA 691
++ +KS +A
Sbjct: 725 LSGDKSASEA 734
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 104/425 (24%), Positives = 181/425 (42%), Gaps = 90/425 (21%)
Query: 262 IMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQE 321
++ TSL+ YAK G +D A +F M +NIV NAM+ GY C +RM E
Sbjct: 77 VVYWTSLLSKYAKTGYLDEARVLFEVMPERNIVTCNAMLTGYV---------KC-RRMNE 126
Query: 322 DNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKF 381
A T+ +P K + V+ TAL D G+ +
Sbjct: 127 ------AWTLFREMP--------------------KNVVSWTVMLTALCDD----GRSED 156
Query: 382 AECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAE 441
A +F + E+N+VSWN ++ ++NG E+A ++F + ++ D V+ +++ Y E
Sbjct: 157 AVELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSR----DVVSWNAMIKGYIE 212
Query: 442 LATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTM 501
+ E K + +++ N T ++VY Y + GD++ A R F M +N+VSW M
Sbjct: 213 NDGMEEAKLLFGDMSE----KNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAM 268
Query: 502 IMAYAIHGFGTISIQLFSRMKQ--NGIEPNESTFVSLLSSCSISG-------------LV 546
I +A + ++ LF MK+ + + PN T +SL +C G ++
Sbjct: 269 ISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVI 328
Query: 547 NEGWE--------------------LFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAK 586
+ GWE L S + N + ++ +++ + G+L+ A+
Sbjct: 329 SNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESFDLQSCNIIINRYLKNGDLERAE 388
Query: 587 QFIEEMPLVPTARIWGSLLTASRNNNDIFFAEFAAKHILSHDNDNTGCYVLLA-----NM 641
E + + W S++ D+ A F L HD D V+++ +
Sbjct: 389 TLFERVKSLHDKVSWTSMIDGYLEAGDVSRA-FGLFQKL-HDKDGVTWTVMISGLVQNEL 446
Query: 642 YAEAG 646
+AEA
Sbjct: 447 FAEAA 451
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 134/549 (24%), Positives = 238/549 (43%), Gaps = 104/549 (18%)
Query: 144 EGKKVHGK--LIKI----GLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNC 197
EG VH + L KI ++R +Y SL+ Y K G+++ A +FE MP R++V+ N
Sbjct: 55 EGGLVHARHLLDKIPQRGSINRVVY-WTSLLSKYAKTGYLDEARVLFEVMPERNIVTCNA 113
Query: 198 MVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLS----MISSLGGCSIGCCVRGGKEIHCQV 253
M+ GY ++ F+EM P + M+++L C G E ++
Sbjct: 114 MLTGYVKCRRMNEAWTLFREM------PKNVVSWTVMLTAL-------CDDGRSEDAVEL 160
Query: 254 IRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESF 313
E +++ +L+ + G ++ A++VF+ M +++V+WNAMI GY N E+
Sbjct: 161 FDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGMEEAK 220
Query: 314 TCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMY 373
M E N +V T++V Y
Sbjct: 221 LLFGDMSEKN---------------------------------------VVTWTSMVYGY 241
Query: 374 GKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRN--QTLKPDAVT 431
+ G ++ A +F + E+N+VSW A+I+ + N EAL LF ++ + P+ T
Sbjct: 242 CRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGET 301
Query: 432 IASILPAYA------ELATVSECKQIHAYITK---LELSSNTFTSNAIVYMYAKCGDLQT 482
+ S+ AYA E + E Q+HA + + + + ++V+MYA G + +
Sbjct: 302 LISL--AYACGGLGVEFRRLGE--QLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIAS 357
Query: 483 ARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSI 542
A+ + SF +L S N +I Y +G + LF R+K ++ ++ S++
Sbjct: 358 AQSLLNE-SF-DLQSCNIIINRYLKNGDLERAETLFERVKS---LHDKVSWTSMIDGYLE 412
Query: 543 SGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEM---PLVPTAR 599
+G V+ + LF + + + + M+ L + A + +M L P
Sbjct: 413 AGDVSRAFGLFQKLHDKDGVTWTV-----MISGLVQNELFAEAASLLSDMVRCGLKPLNS 467
Query: 600 IWGSLLTASRNNNDIFFAEFAAKHILSHDNDNTGCY---VLLAN----MYAEAGRWEDVE 652
+ LL+++ +++ KHI T CY ++L N MYA+ G ED
Sbjct: 468 TYSVLLSSAGATSNL----DQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAY 523
Query: 653 QI--KLVMK 659
+I K+V K
Sbjct: 524 EIFAKMVQK 532
>AT2G21090.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9045695-9047488 REVERSE
Length = 597
Score = 261 bits (667), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 159/506 (31%), Positives = 260/506 (51%), Gaps = 35/506 (6%)
Query: 239 IGCCVRGGKEIH-CQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWN 297
IG ++ GK I C+V ++ +++ Y K G + A VF+ M +++V+WN
Sbjct: 89 IGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWN 148
Query: 298 AMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRK 357
M+ GYA +G+ E+ K + + + + LL +C K L + HG +
Sbjct: 149 TMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVA 208
Query: 358 MFLPHLVLETALVDMYGKCGQLK-------------------------------FAECVF 386
FL ++VL +++D Y KCGQ++ AE +F
Sbjct: 209 GFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLF 268
Query: 387 GRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVS 446
+ EKN VSW A+IA YV+ G AL+LF + +KP+ T +S L A A +A++
Sbjct: 269 CEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLR 328
Query: 447 ECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFK-NLVSWNTMIMAY 505
K+IH Y+ + + N ++++ MY+K G L+ + R F K + V WNTMI A
Sbjct: 329 HGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISAL 388
Query: 506 AIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYG 565
A HG G ++++ M + ++PN +T V +L++CS SGLV EG F SM + + I
Sbjct: 389 AQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPD 448
Query: 566 IEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTASRNNNDIFFAEFAAKHIL 625
EHY C++DLLGR G + IEEMP P IW ++L R + + + AA ++
Sbjct: 449 QEHYACLIDLLGRAGCFKELMRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELI 508
Query: 626 SHDNDNTGCYVLLANMYAEAGRWEDVEQIKLVMKKKGLAKTVDCCTVESKGKSQKFINNN 685
D +++ Y+LL+++YA+ G+WE VE+++ VMKK+ + K +E + K + F ++
Sbjct: 509 KLDPESSAPYILLSSIYADHGKWELVEKLRGVMKKRRVNKEKAVSWIEIEKKVEAFTVSD 568
Query: 686 KSHQQAYM--IYDVLDIILKKIGEDV 709
SH A IY +L + I E+
Sbjct: 569 GSHAHARKEEIYFILHNLAAVIEEEA 594
Score = 160 bits (405), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 116/433 (26%), Positives = 203/433 (46%), Gaps = 39/433 (9%)
Query: 159 RDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEM 218
R++Y N+++ Y K G + A VF++MP RD+VSWN MV GY G+ ++L +KE
Sbjct: 111 RNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEF 170
Query: 219 LGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKV 278
G K + S L C ++ ++ H QV+ G ++++ S+ID YAKCG++
Sbjct: 171 RRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQM 230
Query: 279 DYAERVFNEMTCKNI-------------------------------VAWNAMIGGYAING 307
+ A+R F+EMT K+I V+W A+I GY G
Sbjct: 231 ESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQG 290
Query: 308 HFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLET 367
+ ++M + P+ T + L + + +L GK IHGY IR P+ ++ +
Sbjct: 291 SGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVIS 350
Query: 368 ALVDMYGKCGQLKFAECVFGRINEK-NMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLK 426
+L+DMY K G L+ +E VF ++K + V WN +I+A Q+G +AL + + ++
Sbjct: 351 SLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQ 410
Query: 427 PDAVTIASILPAYAELATVSE-CKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARR 485
P+ T+ IL A + V E + + + + + ++ + + G + R
Sbjct: 411 PNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMR 470
Query: 486 YFDSMSFK-NLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISG 544
+ M F+ + WN ++ IHG + + + + ++P S LLSS
Sbjct: 471 KIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELIK--LDPESSAPYILLSSIYAD- 527
Query: 545 LVNEGWELFNSMK 557
+ WEL ++
Sbjct: 528 --HGKWELVEKLR 538
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 103/380 (27%), Positives = 179/380 (47%), Gaps = 42/380 (11%)
Query: 70 FVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTF 129
+V SG + A +F+ M + D WN ++ G++ G E + FY GI + F+F
Sbjct: 123 YVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSF 182
Query: 130 PFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPL 189
++ AC + ++ HG+++ G ++ + S+ID Y K G +E A++ F+ M +
Sbjct: 183 AGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTV 242
Query: 190 RDLVSWNCMVNGYRVIGD-------------------------------GLKSLMCFKEM 218
+D+ W +++GY +GD G ++L F++M
Sbjct: 243 KDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKM 302
Query: 219 LGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKV 278
+ LG KP++ + S L + +R GKEIH +IR + + +V +SLIDMY+K G +
Sbjct: 303 IALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSL 362
Query: 279 DYAERVFNEMTCK-NIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPS 337
+ +ERVF K + V WN MI A +G ++ L M + + P+ T++ +L +
Sbjct: 363 EASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNA 422
Query: 338 CSKFGTLLEG-KCIHGYAIRKMFLPHLVLETALVDMYGKCG-----QLKFAECVFGRINE 391
CS G + EG + ++ +P L+D+ G+ G K E F E
Sbjct: 423 CSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPF----E 478
Query: 392 KNMVSWNAIIAAYVQNGRNE 411
+ WNAI+ +G E
Sbjct: 479 PDKHIWNAILGVCRIHGNEE 498
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 107/255 (41%), Gaps = 38/255 (14%)
Query: 398 NAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAY--I 455
+ ++ + +A+ L Q ++ +AS+L + ++ + K IH + I
Sbjct: 15 QSFLSKHATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKWIHRHLKI 74
Query: 456 TKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVS------------------ 497
T + NT SN ++ MY KCG A + FD M +NL S
Sbjct: 75 TGFK-RPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRAR 133
Query: 498 -------------WNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISG 544
WNTM++ YA G ++ + +++GI+ NE +F LL++C S
Sbjct: 134 VVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSR 193
Query: 545 LVNEGWELFNSMKMDYNIDYGIEHYGC-MVDLLGRTGNLDAAKQFIEEMPLVPTARIWGS 603
+ + + + + + C ++D + G +++AK+ +EM V IW +
Sbjct: 194 QLQLNRQAHGQVLVAGFLSNVV--LSCSIIDAYAKCGQMESAKRCFDEMT-VKDIHIWTT 250
Query: 604 LLTASRNNNDIFFAE 618
L++ D+ AE
Sbjct: 251 LISGYAKLGDMEAAE 265
>AT5G37570.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:14924494-14926146 REVERSE
Length = 550
Score = 260 bits (664), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 159/528 (30%), Positives = 267/528 (50%), Gaps = 11/528 (2%)
Query: 141 SFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEK-VFEAMPLRDLVSWNCMV 199
S I ++H ++I+ GL++D + + I VFE +P WN ++
Sbjct: 22 SEIHLNQIHARIIRKGLEQDQNLISIFISSSSSSSSSLSYSSSVFERVPSPGTYLWNHLI 81
Query: 200 NGYRVIGDGLKSLMCFKEMLGLG-EKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGL 258
GY +++ M+ G +PD + + CS VR G +H V+R G
Sbjct: 82 KGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQVRVGSSVHGLVLRIGF 141
Query: 259 ELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKR 318
+ D++V TS +D Y KC + A +VF EM +N V+W A++ Y +G E+ +
Sbjct: 142 DKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYVKSGELEEAKSMFDL 201
Query: 319 MQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQ 378
M E NL + L+ K G L+ K + ++ + + T+++D Y K G
Sbjct: 202 MPERNLG----SWNALVDGLVKSGDLVNAKKLFDEMPKRDIISY----TSMIDGYAKGGD 253
Query: 379 LKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPA 438
+ A +F ++ +W+A+I Y QNG+ EA ++F + + +KPD + ++ A
Sbjct: 254 MVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSA 313
Query: 439 YAELATVSECKQIHAYI-TKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVS 497
+++ C+++ +Y+ ++ S+ + A++ M AKCG + A + F+ M ++LVS
Sbjct: 314 CSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMDRAAKLFEEMPQRDLVS 373
Query: 498 WNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMK 557
+ +M+ AIHG G+ +I+LF +M GI P+E F +L C S LV EG F M+
Sbjct: 374 YCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSRLVEEGLRYFELMR 433
Query: 558 MDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTASRNNNDIFFA 617
Y+I +HY C+V+LL RTG L A + I+ MP A WGSLL + + A
Sbjct: 434 KKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASAWGSLLGGCSLHGNTEIA 493
Query: 618 EFAAKHILSHDNDNTGCYVLLANMYAEAGRWEDVEQIKLVMKKKGLAK 665
E A+H+ + + G YVLL+N+YA RW DV ++ M + G+ K
Sbjct: 494 EVVARHLFELEPQSAGSYVLLSNIYAALDRWTDVAHLRDKMNENGITK 541
Score = 198 bits (503), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 139/466 (29%), Positives = 234/466 (50%), Gaps = 22/466 (4%)
Query: 82 LFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIG-IDNFTFPFVIKACGRLL 140
+FE++ P TY+WN +I+G+SNK LF E + RM G+ D +TFP V+K C
Sbjct: 65 VFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNG 124
Query: 141 SFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVN 200
G VHG +++IG D+D+ V S +D Y K + A KVF MP R+ VSW +V
Sbjct: 125 QVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVV 184
Query: 201 GYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCS--IGCCVRGGKEIHCQVIRNGL 258
Y G+ ++ F M P+R +LG + + V+ G ++ + + + +
Sbjct: 185 AYVKSGELEEAKSMFDLM------PER-----NLGSWNALVDGLVKSGDLVNAKKLFDEM 233
Query: 259 -ELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLK 317
+ DI+ TS+ID YAK G + A +F E ++ AW+A+I GYA NG E+F
Sbjct: 234 PKRDIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFS 293
Query: 318 RMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKM--FLPHLVLETALVDMYGK 375
M N+ PD M+ L+ +CS+ G + + Y ++M F H V+ AL+DM K
Sbjct: 294 EMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVV-PALIDMNAK 352
Query: 376 CGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASI 435
CG + A +F + ++++VS+ +++ +G EA+ LF + ++ + PD V I
Sbjct: 353 CGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVI 412
Query: 436 LPAYAELATVSE-CKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKN 494
L + V E + K + ++ + IV + ++ G L+ A SM F+
Sbjct: 413 LKVCGQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEA 472
Query: 495 LVS-WNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSS 539
S W +++ ++HG I+ + + + +EP + LLS+
Sbjct: 473 HASAWGSLLGGCSLHGNTEIAEVVARHLFE--LEPQSAGSYVLLSN 516
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 143/298 (47%), Gaps = 27/298 (9%)
Query: 27 PKRDL-----LVNPRIRKSN--PTKKQMSETPKRGMIKPNSLSLTRSLCEFVDSGAMDNA 79
P+R+L LV+ ++ + KK E PKR +I S T + + G M +A
Sbjct: 203 PERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDII-----SYTSMIDGYAKGGDMVSA 257
Query: 80 LYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRL 139
LFE+ D W+ +I G++ G E + M + + D F ++ AC ++
Sbjct: 258 RDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQM 317
Query: 140 LSFIEGKKV----HGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSW 195
F +KV H ++ K YV +LIDM K G ++ A K+FE MP RDLVS+
Sbjct: 318 GCFELCEKVDSYLHQRMNKFS---SHYVVPALIDMNAKCGHMDRAAKLFEEMPQRDLVSY 374
Query: 196 NCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIR 255
M+ G + G G +++ F++M+ G PD ++ L C V G + +++R
Sbjct: 375 CSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSRLVEEGLR-YFELMR 433
Query: 256 NGLELDIMVQ----TSLIDMYAKCGKVDYAERVFNEMTCK-NIVAWNAMIGGYAINGH 308
+ I+ + ++++ ++ GK+ A + M + + AW +++GG +++G+
Sbjct: 434 K--KYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASAWGSLLGGCSLHGN 489
>AT1G06145.1 | Symbols: EMB1444 | EMB1444 (EMBRYO DEFECTIVE 1444) |
chr1:1867129-1868862 REVERSE
Length = 577
Score = 259 bits (662), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 156/564 (27%), Positives = 274/564 (48%), Gaps = 42/564 (7%)
Query: 150 GKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGL 209
+IK L++D + N I F +++A M ++ +N + G+ +
Sbjct: 49 AAMIKTSLNQDCRLMNQFITACTSFKRLDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPI 108
Query: 210 KSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLI 269
+SL + ML P + S + S R G+ + + + G + +QT+LI
Sbjct: 109 RSLELYVRMLRDSVSPSSYTYSSLVKASSFAS--RFGESLQAHIWKFGFGFHVKIQTTLI 166
Query: 270 DMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAI 329
D Y+ G++ A +VF+EM ++ +AW M+ Y + + +M E N
Sbjct: 167 DFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKN------ 220
Query: 330 TMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRI 389
+C L++ Y G L+ AE +F ++
Sbjct: 221 ---EATSNC------------------------------LINGYMGLGNLEQAESLFNQM 247
Query: 390 NEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECK 449
K+++SW +I Y QN R EA+ +F+ + + + PD VT+++++ A A L + K
Sbjct: 248 PVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGK 307
Query: 450 QIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHG 509
++H Y + + + +A+V MY+KCG L+ A F ++ KNL WN++I A HG
Sbjct: 308 EVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHG 367
Query: 510 FGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHY 569
F ++++F++M+ ++PN TFVS+ ++C+ +GLV+EG ++ SM DY+I +EHY
Sbjct: 368 FAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHY 427
Query: 570 GCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTASRNNNDIFFAEFAAKHILSHDN 629
G MV L + G + A + I M P A IWG+LL R + ++ AE A ++ +
Sbjct: 428 GGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRIHKNLVIAEIAFNKLMVLEP 487
Query: 630 DNTGCYVLLANMYAEAGRWEDVEQIKLVMKKKGLAKTVD-CCTVESKGKSQKFINNNKSH 688
N+G Y LL +MYAE RW DV +I+ M++ G+ K ++ + F +KSH
Sbjct: 488 MNSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEKICPGTSSIRIDKRDHLFAAADKSH 547
Query: 689 QQAYMIYDVLDIILKKIGEDVYIH 712
+ + +LD I ++G Y+
Sbjct: 548 SASDEVCLLLDEIYDQMGLAGYVQ 571
Score = 137 bits (344), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 103/442 (23%), Positives = 198/442 (44%), Gaps = 76/442 (17%)
Query: 32 LVNPRIRK--SNPTKKQMSETPKRGMIKPNSLSLTRSLCEFVDS----GAMDNALYLFEK 85
L P ++K + ++ E+ MIK + R + +F+ + +D A+ +
Sbjct: 26 LAPPNLKKIIKQCSTPKLLESALAAMIKTSLNQDCRLMNQFITACTSFKRLDLAVSTMTQ 85
Query: 86 MNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFT----------------- 128
M +P+ +++N + +GF ++ Y RM + + ++T
Sbjct: 86 MQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASSFASRFGES 145
Query: 129 ---------FPFVIKACGRLLSFI-------EGKKVHGKL--------------IKIGLD 158
F F +K L+ F E +KV ++ + LD
Sbjct: 146 LQAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLD 205
Query: 159 RDIY-------------VCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVI 205
D N LI+ Y G +E AE +F MP++D++SW M+ GY
Sbjct: 206 MDSANSLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQN 265
Query: 206 GDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQ 265
+++ F +M+ G PD ++M + + C+ + GKE+H ++NG LD+ +
Sbjct: 266 KRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIG 325
Query: 266 TSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLI 325
++L+DMY+KCG ++ A VF + KN+ WN++I G A +G E+ +M+ +++
Sbjct: 326 SALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVK 385
Query: 326 PDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLET-----ALVDMYGKCGQLK 380
P+A+T +++ +C+ G + EG+ I+ R M + ++ +V ++ K G +
Sbjct: 386 PNAVTFVSVFTACTHAGLVDEGRRIY----RSMIDDYSIVSNVEHYGGMVHLFSKAGLIY 441
Query: 381 FAECVFGRIN-EKNMVSWNAII 401
A + G + E N V W A++
Sbjct: 442 EALELIGNMEFEPNAVIWGALL 463
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 141/296 (47%), Gaps = 13/296 (4%)
Query: 17 DDASFKQMGAPKRDLLVNPRIRKSNPTKKQMSETPKRGMIKPNSLSLTRSLCEFVDSGAM 76
DD ++ M + R +L + +N QMSE N + + ++ G +
Sbjct: 189 DDIAWTTMVSAYRRVL---DMDSANSLANQMSEK--------NEATSNCLINGYMGLGNL 237
Query: 77 DNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKAC 136
+ A LF +M D W +I+G+S ++E I +++M EGI D T VI AC
Sbjct: 238 EQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISAC 297
Query: 137 GRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWN 196
L GK+VH ++ G D+Y+ ++L+DMY K G +E A VF +P ++L WN
Sbjct: 298 AHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWN 357
Query: 197 CMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRN 256
++ G G ++L F +M KP+ ++ +S C+ V G+ I+ +I +
Sbjct: 358 SIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDD 417
Query: 257 -GLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCK-NIVAWNAMIGGYAINGHFL 310
+ ++ ++ +++K G + A + M + N V W A++ G I+ + +
Sbjct: 418 YSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRIHKNLV 473
>AT4G18840.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:10338719-10340356 REVERSE
Length = 545
Score = 253 bits (645), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 154/537 (28%), Positives = 268/537 (49%), Gaps = 43/537 (8%)
Query: 138 RLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYF---KFGFVEVAEKVFEAMPLRDLVS 194
R S E ++ H ++K GL D + + L+ + V A + + + +
Sbjct: 48 RAKSLTEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIGSPNGFT 107
Query: 195 WNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVI 254
N ++ Y +L F+EML PD+ S L C+ C G++IH I
Sbjct: 108 HNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFI 167
Query: 255 RNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFT 314
++GL D+ V+ +L+++Y + G + A +V + M ++ V+WN+++ Y G E+
Sbjct: 168 KSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARA 227
Query: 315 CLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYG 374
M+E N + N + I GYA
Sbjct: 228 LFDEMEERN-----VESWNFM--------------ISGYA-------------------- 248
Query: 375 KCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFH-CLRNQTLKPDAVTIA 433
G +K A+ VF + +++VSWNA++ AY G E LE+F+ L + T KPD T+
Sbjct: 249 AAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLV 308
Query: 434 SILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFK 493
S+L A A L ++S+ + +H YI K + F + A+V MY+KCG + A F + S +
Sbjct: 309 SVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKR 368
Query: 494 NLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELF 553
++ +WN++I ++HG G ++++FS M G +PN TF+ +LS+C+ G++++ +LF
Sbjct: 369 DVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLF 428
Query: 554 NSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTASRNNND 613
M Y ++ IEHYGCMVDLLGR G ++ A++ + E+P + + SLL A +
Sbjct: 429 EMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPADEASILLESLLGACKRFGQ 488
Query: 614 IFFAEFAAKHILSHDNDNTGCYVLLANMYAEAGRWEDVEQIKLVMKKKGLAKTVDCC 670
+ AE A +L + ++ Y ++N+YA GRWE V + M+ + + +++D
Sbjct: 489 LEQAERIANRLLELNLRDSSGYAQMSNLYASDGRWEKVIDGRRNMRAERVNRSLDVA 545
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 159/344 (46%), Gaps = 45/344 (13%)
Query: 43 TKKQMSETPKRGMIKPNSLSLTRSLCEFVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFS 102
+K + P R + NSL L +++ G +D A LF++M + + WN +I G++
Sbjct: 194 ARKVLDRMPVRDAVSWNSL-----LSAYLEKGLVDEARALFDEMEERNVESWNFMISGYA 248
Query: 103 NKGL-------------------------------FQEVIDFYHRMEYEGI-GIDNFTFP 130
GL + EV++ +++M + D FT
Sbjct: 249 AAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLV 308
Query: 131 FVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLR 190
V+ AC L S +G+ VH + K G++ + ++ +L+DMY K G ++ A +VF A R
Sbjct: 309 SVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKR 368
Query: 191 DLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCS-IGCCVRGGK-- 247
D+ +WN +++ V G G +L F EM+ G KP+ ++ I L C+ +G + K
Sbjct: 369 DVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLF 428
Query: 248 EIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNI-VAWNAMIGGYAIN 306
E+ V R +E I ++D+ + GK++ AE + NE+ + +++G
Sbjct: 429 EMMSSVYR--VEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPADEASILLESLLGACKRF 486
Query: 307 GHFLESFTCLKRMQEDNLIPDA--ITMINLLPSCSKFGTLLEGK 348
G ++ R+ E NL + M NL S ++ +++G+
Sbjct: 487 GQLEQAERIANRLLELNLRDSSGYAQMSNLYASDGRWEKVIDGR 530
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/361 (22%), Positives = 160/361 (44%), Gaps = 22/361 (6%)
Query: 316 LKRMQEDNLIPDAI---TMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDM 372
L+ +Q++NL ++ T + +L + +L E + H + ++ + LV
Sbjct: 21 LRLLQKENLKKMSVCSSTPVPILSFTERAKSLTEIQQAHAFMLKTGLFHDTFSASKLVAF 80
Query: 373 YGKCGQLK---FAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDA 429
+ K +A + RI N + N++I AY + E AL +F + + PD
Sbjct: 81 AATNPEPKTVSYAHSILNRIGSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDK 140
Query: 430 VTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDS 489
+ +L A A E +QIH K L ++ F N +V +Y + G + AR+ D
Sbjct: 141 YSFTFVLKACAAFCGFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDR 200
Query: 490 MSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEG 549
M ++ VSWN+++ AY G + LF M++ +E ++ ++S + +GLV E
Sbjct: 201 MPVRDAVSWNSLLSAYLEKGLVDEARALFDEMEERNVE----SWNFMISGYAAAGLVKEA 256
Query: 550 WELFNSMKMDYNIDY-----GIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSL 604
E+F+SM + + + H GC ++ L+ + +++ P S+
Sbjct: 257 KEVFDSMPVRDVVSWNAMVTAYAHVGCYNEV------LEVFNKMLDDSTEKPDGFTLVSV 310
Query: 605 LTASRNNNDIFFAEFAAKHILSHDNDNTG-CYVLLANMYAEAGRWEDVEQIKLVMKKKGL 663
L+A + + E+ +I H + G L +MY++ G+ + ++ K+ +
Sbjct: 311 LSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDV 370
Query: 664 A 664
+
Sbjct: 371 S 371
>AT5G43790.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:17592099-17593481 REVERSE
Length = 460
Score = 252 bits (643), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 145/441 (32%), Positives = 246/441 (55%), Gaps = 22/441 (4%)
Query: 247 KEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAIN 306
K+IH Q+I GL + L+ + + + YA + ++ ++ +N +I N
Sbjct: 26 KQIHAQIITIGLSHHTYPLSKLLHLSSTVC-LSYALSILRQIPNPSVFLYNTLISSIVSN 84
Query: 307 GHFLESFTCLKRMQE-----DNLI-PDAITMINLLPSCSKFGTLLE--GKCIHGYAIRKM 358
+ ++ + N + P+ T +L + S F G+ +H + ++
Sbjct: 85 HNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKA-SGFDAQWHRHGRALHAHVLK-- 141
Query: 359 FLPHL----VLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQN---GRNE 411
FL + ++ ALV Y CG+L+ A +F RI E ++ +WN ++AAY + +E
Sbjct: 142 FLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAAYANSEEIDSDE 201
Query: 412 EALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIV 471
E L LF +R Q ++P+ +++ +++ + A L H Y+ K L+ N F +++
Sbjct: 202 EVLLLF--MRMQ-VRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLI 258
Query: 472 YMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNES 531
+Y+KCG L AR+ FD MS +++ +N MI A+HGFG I+L+ + G+ P+ +
Sbjct: 259 DLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSA 318
Query: 532 TFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEE 591
TFV +S+CS SGLV+EG ++FNSMK Y I+ +EHYGC+VDLLGR+G L+ A++ I++
Sbjct: 319 TFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKK 378
Query: 592 MPLVPTARIWGSLLTASRNNNDIFFAEFAAKHILSHDNDNTGCYVLLANMYAEAGRWEDV 651
MP+ P A +W S L +S+ + D E A KH+L + +N+G YVLL+N+YA RW DV
Sbjct: 379 MPVKPNATLWRSFLGSSQTHGDFERGEIALKHLLGLEFENSGNYVLLSNIYAGVNRWTDV 438
Query: 652 EQIKLVMKKKGLAKTVDCCTV 672
E+ + +MK + K+ T+
Sbjct: 439 EKTRELMKDHRVNKSPGISTL 459
Score = 130 bits (326), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 104/379 (27%), Positives = 185/379 (48%), Gaps = 41/379 (10%)
Query: 61 LSLTRSLCEFVDSGAMDNALYLFEKMNQPDTYIWNVIIRGF-SNKGLFQEVIDF--YHRM 117
L L+ ++C + AL + ++ P +++N +I SN Q + F Y ++
Sbjct: 48 LHLSSTVC-------LSYALSILRQIPNPSVFLYNTLISSIVSNHNSTQTHLAFSLYDQI 100
Query: 118 ---EYEGIGIDNFTFPFVIKACGRLLSF-IEGKKVHGKLIKI--GLDRDIYVCNSLIDMY 171
+ + FT+P + KA G + G+ +H ++K ++ D +V +L+ Y
Sbjct: 101 LSSRSNFVRPNEFTYPSLFKASGFDAQWHRHGRALHAHVLKFLEPVNHDRFVQAALVGFY 160
Query: 172 FKFGFVEVAEKVFEAMPLRDLVSWNCMVNGY---RVIGDGLKSLMCFKEMLGLGEKPDRL 228
G + A +FE + DL +WN ++ Y I + L+ F M +P+ L
Sbjct: 161 ANCGKLREARSLFERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRM---QVRPNEL 217
Query: 229 SMISSLGGCS-IGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNE 287
S+++ + C+ +G VR G H V++N L L+ V TSLID+Y+KCG + +A +VF+E
Sbjct: 218 SLVALIKSCANLGEFVR-GVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDE 276
Query: 288 MTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEG 347
M+ +++ +NAMI G A++G E K + L+PD+ T + + +CS G + EG
Sbjct: 277 MSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVDEG 336
Query: 348 -------KCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFA-ECVFGRINEKNMVSWNA 399
K ++G P + LVD+ G+ G+L+ A EC+ + N W +
Sbjct: 337 LQIFNSMKAVYGIE------PKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRS 390
Query: 400 IIAAYVQNG---RNEEALE 415
+ + +G R E AL+
Sbjct: 391 FLGSSQTHGDFERGEIALK 409
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 123/255 (48%), Gaps = 8/255 (3%)
Query: 70 FVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLF---QEVIDFYHRMEYEGIGIDN 126
+ + G + A LFE++ +PD WN ++ ++N +EV+ + RM+ + +
Sbjct: 160 YANCGKLREARSLFERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQ---VRPNE 216
Query: 127 FTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEA 186
+ +IK+C L F+ G H ++K L + +V SLID+Y K G + A KVF+
Sbjct: 217 LSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDE 276
Query: 187 MPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGG 246
M RD+ +N M+ G V G G + + +K ++ G PD + + ++ CS V G
Sbjct: 277 MSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVDEG 336
Query: 247 KEI-HCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCK-NIVAWNAMIGGYA 304
+I + G+E + L+D+ + G+++ AE +M K N W + +G
Sbjct: 337 LQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGSSQ 396
Query: 305 INGHFLESFTCLKRM 319
+G F LK +
Sbjct: 397 THGDFERGEIALKHL 411
>AT1G34160.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:12441393-12443256 FORWARD
Length = 558
Score = 251 bits (640), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 153/477 (32%), Positives = 256/477 (53%), Gaps = 14/477 (2%)
Query: 276 GKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLL 335
G + +A ++F + WNA+I G+A + H +F+ + M + + AI ++ L
Sbjct: 51 GDLSFAVQIFRYIPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDAL 110
Query: 336 PSCSKFGTLLEGKC------IHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRI 389
C +H R+ +L T L+D Y K G L A +F +
Sbjct: 111 TCSFTLKACARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEM 170
Query: 390 NEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECK 449
+++ SWNA+IA V R EA+EL+ + + ++ VT+ + L A + L V E +
Sbjct: 171 PVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGE 230
Query: 450 QI-HAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFK-NLVSWNTMIMAYAI 507
I H Y + N SNA + MY+KCG + A + F+ + K ++V+WNTMI +A+
Sbjct: 231 NIFHGYS-----NDNVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAV 285
Query: 508 HGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIE 567
HG ++++F +++ NGI+P++ ++++ L++C +GLV G +FN+M ++ ++
Sbjct: 286 HGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACK-GVERNMK 344
Query: 568 HYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTASRNNNDIFFAEFAAKHILSH 627
HYGC+VDLL R G L A I M ++P +W SLL AS +D+ AE A++ I
Sbjct: 345 HYGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSLLGASEIYSDVEMAEIASREIKEM 404
Query: 628 DNDNTGCYVLLANMYAEAGRWEDVEQIKLVMKKKGLAKTVDCCTVESKGKSQKFINNNKS 687
+N G +VLL+N+YA GRW+DV +++ M+ K + K +E+KG +F N++KS
Sbjct: 405 GVNNDGDFVLLSNVYAAQGRWKDVGRVRDDMESKQVKKIPGLSYIEAKGTIHEFYNSDKS 464
Query: 688 HQQAYMIYDVLDIILKKIGEDVYIHSLSKFRPADVIKKKMKSPQNHSVKLAICFGLI 744
H+Q IY+ +D I KI ED Y+ ++K + HS KLA+ +GL+
Sbjct: 465 HEQWREIYEKIDEIRFKIREDGYVAQTGLVLHDIGEEEKENALCYHSEKLAVAYGLM 521
Score = 144 bits (364), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 96/347 (27%), Positives = 170/347 (48%), Gaps = 18/347 (5%)
Query: 68 CEFVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIG---- 123
C G + A+ +F + +P T WN IIRGF+ +Y M +
Sbjct: 45 CAISPFGDLSFAVQIFRYIPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAI 104
Query: 124 --IDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAE 181
+D T F +KAC R L ++H ++ + GL D +C +L+D Y K G + A
Sbjct: 105 CRVDALTCSFTLKACARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAY 164
Query: 182 KVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGC 241
K+F+ MP+RD+ SWN ++ G +++ +K M G + ++++++LG CS
Sbjct: 165 KLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLG 224
Query: 242 CVRGGKEIHCQVIRNGLELD-IMVQTSLIDMYAKCGKVDYAERVFNEMTC-KNIVAWNAM 299
V+ G+ I +G D ++V + IDMY+KCG VD A +VF + T K++V WN M
Sbjct: 225 DVKEGENIF-----HGYSNDNVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTM 279
Query: 300 IGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMF 359
I G+A++G + +++++ + PD ++ + L +C G + G + K
Sbjct: 280 ITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACKGV 339
Query: 360 LPHLVLETALVDMYGKCGQLKFAE---CVFGRINEKNMVSWNAIIAA 403
++ +VD+ + G+L+ A C I + V W +++ A
Sbjct: 340 ERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDP--VLWQSLLGA 384
Score = 142 bits (358), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 103/410 (25%), Positives = 195/410 (47%), Gaps = 17/410 (4%)
Query: 138 RLLSFIEGKKVHGKLIKIGLDRDIYVCNSLID--MYFKFGFVEVAEKVFEAMPLRDLVSW 195
+ +SF + K++ + G + ++ + L++ FG + A ++F +P W
Sbjct: 12 KCVSFSQIKQLQSHFLTAGHFQSSFLRSRLLERCAISPFGDLSFAVQIFRYIPKPLTNDW 71
Query: 196 NCMVNGYRVIGDGLKSLMCFKEMLGLGE------KPDRLSMISSLGGCSIGCCVRGGKEI 249
N ++ G+ + ++ ML + D L+ +L C+ C ++
Sbjct: 72 NAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALCSSAMDQL 131
Query: 250 HCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHF 309
HCQ+ R GL D ++ T+L+D Y+K G + A ++F+EM +++ +WNA+I G
Sbjct: 132 HCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRA 191
Query: 310 LESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCI-HGYAIRKMFLPHLVLETA 368
E+ KRM+ + + +T++ L +CS G + EG+ I HGY+ ++++ A
Sbjct: 192 SEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYSN-----DNVIVSNA 246
Query: 369 LVDMYGKCGQLKFAECVFGRIN-EKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKP 427
+DMY KCG + A VF + +K++V+WN +I + +G ALE+F L + +KP
Sbjct: 247 AIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKP 306
Query: 428 DAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYF 487
D V+ + L A V + + + N +V + ++ G L+ A
Sbjct: 307 DDVSYLAALTACRHAGLVEYGLSVFNNMACKGVERNMKHYGCVVDLLSRAGRLREAHDII 366
Query: 488 DSMSF-KNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSL 536
SMS + V W +++ A I+ ++ +K+ G+ N+ FV L
Sbjct: 367 CSMSMIPDPVLWQSLLGASEIYSDVEMAEIASREIKEMGVN-NDGDFVLL 415
Score = 109 bits (272), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 128/257 (49%), Gaps = 9/257 (3%)
Query: 52 KRGMIKPNSLSLTRSLCEFVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVI 111
+RG+ +SL T L + +G + +A LF++M D WN +I G + E +
Sbjct: 137 RRGL-SADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAM 195
Query: 112 DFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKV-HGKLIKIGLDRDIYVCNSLIDM 170
+ Y RME EGI T + AC L EG+ + HG + ++ V N+ IDM
Sbjct: 196 ELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFHGY-----SNDNVIVSNAAIDM 250
Query: 171 YFKFGFVEVAEKVFEAMP-LRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLS 229
Y K GFV+ A +VFE + +V+WN M+ G+ V G+ ++L F ++ G KPD +S
Sbjct: 251 YSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVS 310
Query: 230 MISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMT 289
+++L C V G + + G+E ++ ++D+ ++ G++ A + M+
Sbjct: 311 YLAALTACRHAGLVEYGLSVFNNMACKGVERNMKHYGCVVDLLSRAGRLREAHDIICSMS 370
Query: 290 -CKNIVAWNAMIGGYAI 305
+ V W +++G I
Sbjct: 371 MIPDPVLWQSLLGASEI 387
>AT2G42920.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:17858705-17860384 FORWARD
Length = 559
Score = 250 bits (639), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 148/493 (30%), Positives = 259/493 (52%), Gaps = 34/493 (6%)
Query: 243 VRGGKEIHCQVIRNGLELDIMVQTSLIDMY-AKCGKVDYAERVFNEMTCKNIVAWNAMIG 301
+R K+IH +I+ GL D + + ++ A ++YA VF + KN WN +I
Sbjct: 38 MRELKQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFVWNTIIR 97
Query: 302 GYAINGHFLESFTCLKRM--QEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMF 359
G++ + + + M ++ P +T ++ + + G +G+ +HG I++
Sbjct: 98 GFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGL 157
Query: 360 LPHLVLETALVDMYGKCGQL-----------------------KFAEC--------VFGR 388
+ ++ MY CG L FA+C +F
Sbjct: 158 EDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDE 217
Query: 389 INEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSEC 448
+ ++N VSWN++I+ +V+NGR ++AL++F ++ + +KPD T+ S+L A A L +
Sbjct: 218 MPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQG 277
Query: 449 KQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIH 508
+ IH YI + N+ A++ MY KCG ++ F+ K L WN+MI+ A +
Sbjct: 278 RWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANN 337
Query: 509 GFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEH 568
GF ++ LFS ++++G+EP+ +F+ +L++C+ SG V+ E F MK Y I+ I+H
Sbjct: 338 GFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKH 397
Query: 569 YGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTASRNNNDIFFAEFAAKHILSHD 628
Y MV++LG G L+ A+ I+ MP+ IW SLL+A R ++ A+ AAK + D
Sbjct: 398 YTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMAKRAAKCLKKLD 457
Query: 629 NDNTGCYVLLANMYAEAGRWEDVEQIKLVMKKKGLAKTVDCCTVESKGKSQKFINNNKSH 688
D T YVLL+N YA G +E+ + +L+MK++ + K V C ++E + +FI+ +H
Sbjct: 458 PDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSIEVDFEVHEFISCGGTH 517
Query: 689 QQAYMIYDVLDII 701
++ IY +LDI+
Sbjct: 518 PKSAEIYSLLDIL 530
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 127/465 (27%), Positives = 216/465 (46%), Gaps = 44/465 (9%)
Query: 76 MDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRM--EYEGIGIDNFTFPFVI 133
M+ A +F ++N + ++WN IIRGFS + I + M + T+P V
Sbjct: 74 MNYAYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVF 133
Query: 134 KACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYF--------------------- 172
KA GRL +G+++HG +IK GL+ D ++ N+++ MY
Sbjct: 134 KAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVV 193
Query: 173 ----------KFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLG 222
K G ++ A+ +F+ MP R+ VSWN M++G+ G +L F+EM
Sbjct: 194 AWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKD 253
Query: 223 EKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAE 282
KPD +M+S L C+ G+ IH ++RN EL+ +V T+LIDMY KCG ++
Sbjct: 254 VKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGL 313
Query: 283 RVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFG 342
VF K + WN+MI G A NG + ++ L PD+++ I +L +C+ G
Sbjct: 314 NVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSG 373
Query: 343 TLLEGKCIHGYAIRK-MFLPHLVLETALVDMYGKCGQLKFAECVFGRIN-EKNMVSWNAI 400
+ K M P + T +V++ G G L+ AE + + E++ V W+++
Sbjct: 374 EVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSL 433
Query: 401 IAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILP-AYAELATVSECKQIHAYITKL- 458
++A + G E A CL+ L PD +L AYA E + + +
Sbjct: 434 LSACRKIGNVEMAKRAAKCLKK--LDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQ 491
Query: 459 ---ELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNT 500
E+ ++ + V+ + CG T + + S ++++W+
Sbjct: 492 MEKEVGCSSIEVDFEVHEFISCGG--THPKSAEIYSLLDILNWDV 534
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 125/454 (27%), Positives = 208/454 (45%), Gaps = 57/454 (12%)
Query: 144 EGKKVHGKLIKIGLDRDI--------YVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSW 195
E K++H LIK GL D + C S DM + + VF + ++ W
Sbjct: 40 ELKQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAY-------LVFTRINHKNPFVW 92
Query: 196 NCMVNGYRVIGDGLKSLMCFKEML--GLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQV 253
N ++ G+ ++ F +ML KP RL+ S R G+++H V
Sbjct: 93 NTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMV 152
Query: 254 IRNGLELDIMVQTSLIDMY-------------------------------AKCGKVDYAE 282
I+ GLE D ++ +++ MY AKCG +D A+
Sbjct: 153 IKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQ 212
Query: 283 RVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFG 342
+F+EM +N V+WN+MI G+ NG F ++ + MQE ++ PD TM++LL +C+ G
Sbjct: 213 NLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLG 272
Query: 343 TLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIA 402
+G+ IH Y +R F + ++ TAL+DMY KCG ++ VF +K + WN++I
Sbjct: 273 ASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMIL 332
Query: 403 AYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITK---LE 459
NG E A++LF L L+PD+V+ +L A A V + + + +E
Sbjct: 333 GLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIE 392
Query: 460 LSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSF-KNLVSWNTMIMAYAIHGFGTISIQLF 518
S +T +V + G L+ A +M ++ V W++++ A G + +
Sbjct: 393 PSIKHYT--LMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLL--SACRKIGNVEMAKR 448
Query: 519 SRMKQNGIEPNESTFVSLLSSCSIS-GLVNEGWE 551
+ ++P+E+ LLS+ S GL E E
Sbjct: 449 AAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVE 482
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 130/274 (47%), Gaps = 5/274 (1%)
Query: 54 GMIKPNSLSLTRSLCEFVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDF 113
GMI + ++ + F G +D A LF++M Q + WN +I GF G F++ +D
Sbjct: 186 GMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDM 245
Query: 114 YHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFK 173
+ M+ + + D FT ++ AC L + +G+ +H +++ + + V +LIDMY K
Sbjct: 246 FREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCK 305
Query: 174 FGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISS 233
G +E VFE P + L WN M+ G G +++ F E+ G +PD +S I
Sbjct: 306 CGCIEEGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGV 365
Query: 234 LGGCS-IGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTC-K 291
L C+ G R + + +E I T ++++ G ++ AE + M +
Sbjct: 366 LTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEE 425
Query: 292 NIVAWNAMIGGYAINGHF---LESFTCLKRMQED 322
+ V W++++ G+ + CLK++ D
Sbjct: 426 DTVIWSSLLSACRKIGNVEMAKRAAKCLKKLDPD 459
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 72/163 (44%), Gaps = 14/163 (8%)
Query: 53 RGMIKPNSLSLTRSLCEFVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVID 112
R + NS+ +T + + G ++ L +FE + WN +I G +N G + +D
Sbjct: 286 RNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANNGFEERAMD 345
Query: 113 FYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYF 172
+ +E G+ D+ +F V+ AC +VH L ++ Y+ I Y
Sbjct: 346 LFSELERSGLEPDSVSFIGVLTACAH------SGEVHRADEFFRLMKEKYMIEPSIKHYT 399
Query: 173 KF-------GFVEVAEKVFEAMPL-RDLVSWNCMVNGYRVIGD 207
G +E AE + + MP+ D V W+ +++ R IG+
Sbjct: 400 LMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGN 442
>AT1G26900.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:9319756-9321474 REVERSE
Length = 572
Score = 249 bits (635), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 152/512 (29%), Positives = 259/512 (50%), Gaps = 8/512 (1%)
Query: 143 IEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGY 202
+E ++HG ++K GLD+D + + L+ + + A +FE + +L +N M+ GY
Sbjct: 42 VEVSRIHGYMVKTGLDKDDFAVSKLL-AFSSVLDIRYASSIFEHVSNTNLFMFNTMIRGY 100
Query: 203 RVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDI 262
+ + ++ F ++ G DR S I++L CS CV G+ +H +R+G +
Sbjct: 101 SISDEPERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSIGEGLHGIALRSGFMVFT 160
Query: 263 MVQTSLIDMYAKCGKVDYAERVFNEM-TCKNIVAWNAMIGGYAINGHFLESFTCLKRMQE 321
++ +LI Y CGK+ A +VF+EM + V ++ ++ GY + + M++
Sbjct: 161 DLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRK 220
Query: 322 DNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKF 381
++ + T+++ L + S G L + H I+ L L TAL+ MYGK G +
Sbjct: 221 SEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISS 280
Query: 382 AECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILP--AY 439
A +F K++V+WN +I Y + G EE + L ++ + +KP++ T +L AY
Sbjct: 281 ARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAY 340
Query: 440 AELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWN 499
+E A V + + + + ++ + A+V MYAK G L+ A F+ M K++ SW
Sbjct: 341 SEAAFVG--RTVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWT 398
Query: 500 TMIMAYAIHGFGTISIQLFSRMKQNG--IEPNESTFVSLLSSCSISGLVNEGWELFNSMK 557
MI Y HG ++ LF++M++ + PNE TF+ +L++CS GLV EG F M
Sbjct: 399 AMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACSHGGLVMEGIRCFKRMV 458
Query: 558 MDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTASRNNNDIFFA 617
Y+ +EHYGC+VDLLGR G L+ A + I +P+ + W +LL A R +
Sbjct: 459 EAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPITSDSTAWRALLAACRVYGNADLG 518
Query: 618 EFAAKHILSHDNDNTGCYVLLANMYAEAGRWE 649
E + + +LLA +A AG E
Sbjct: 519 ESVMMRLAEMGETHPADAILLAGTHAVAGNPE 550
Score = 179 bits (454), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 127/478 (26%), Positives = 234/478 (48%), Gaps = 26/478 (5%)
Query: 82 LFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLS 141
+FE ++ + +++N +IRG+S + ++++ +G+ +D F+F +K+C R L
Sbjct: 81 IFEHVSNTNLFMFNTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELC 140
Query: 142 FIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLR-DLVSWNCMVN 200
G+ +HG ++ G + N+LI Y G + A KVF+ MP D V+++ ++N
Sbjct: 141 VSIGEGLHGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMN 200
Query: 201 GYRVIGDGLKSLMCFKEM------LGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVI 254
GY + +L F+ M + + LS IS LG S G + H I
Sbjct: 201 GYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLS------GAESAHVLCI 254
Query: 255 RNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFT 314
+ GL+LD+ + T+LI MY K G + A R+F+ K++V WN MI YA G E
Sbjct: 255 KIGLDLDLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVW 314
Query: 315 CLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYG 374
L++M+ + + P++ T + LL SC+ G+ + + +L TALVDMY
Sbjct: 315 LLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYA 374
Query: 375 KCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQT--LKPDAVTI 432
K G L+ A +F R+ +K++ SW A+I+ Y +G EA+ LF+ + + ++P+ +T
Sbjct: 375 KVGLLEKAVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITF 434
Query: 433 ASILPAYAELATVSE---C--KQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYF 487
+L A + V E C + + AY + +V + + G L+ A
Sbjct: 435 LVVLNACSHGGLVMEGIRCFKRMVEAY----SFTPKVEHYGCVVDLLGRAGQLEEAYELI 490
Query: 488 DSMSF-KNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISG 544
++ + +W ++ A ++G + + R+ + G E + + + L + +++G
Sbjct: 491 RNLPITSDSTAWRALLAACRVYGNADLGESVMMRLAEMG-ETHPADAILLAGTHAVAG 547
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 119/255 (46%), Gaps = 8/255 (3%)
Query: 73 SGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFV 132
+G + +A +F+ + D WN +I ++ GL +E + +M+YE + ++ TF +
Sbjct: 275 TGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGL 334
Query: 133 IKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDL 192
+ +C + G+ V L + + D + +L+DMY K G +E A ++F M +D+
Sbjct: 335 LSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDV 394
Query: 193 VSWNCMVNGYRVIGDGLKSLMCFKEM--LGLGEKPDRLSMISSLGGCSIGCCVRGGKEIH 250
SW M++GY G +++ F +M +P+ ++ + L CS G V G I
Sbjct: 395 KSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACSHGGLVMEG--IR 452
Query: 251 C---QVIRNGLELDIMVQTSLIDMYAKCGKVDYA-ERVFNEMTCKNIVAWNAMIGGYAIN 306
C V + ++D+ + G+++ A E + N + AW A++ +
Sbjct: 453 CFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPITSDSTAWRALLAACRVY 512
Query: 307 GHFLESFTCLKRMQE 321
G+ + + R+ E
Sbjct: 513 GNADLGESVMMRLAE 527
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 126/271 (46%), Gaps = 6/271 (2%)
Query: 321 EDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLK 380
E L P +IN L SC +E IHGY + K L + + + ++
Sbjct: 21 ESLLSPQCQKLINDLRSCRD---TVEVSRIHGYMV-KTGLDKDDFAVSKLLAFSSVLDIR 76
Query: 381 FAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYA 440
+A +F ++ N+ +N +I Y + E A +F+ LR + L D + + L + +
Sbjct: 77 YASSIFEHVSNTNLFMFNTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLKSCS 136
Query: 441 ELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFK-NLVSWN 499
VS + +H + T NA+++ Y CG + AR+ FD M + V+++
Sbjct: 137 RELCVSIGEGLHGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFS 196
Query: 500 TMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMD 559
T++ Y +++ LF M+++ + N ST +S LS+ S G ++ G E + + +
Sbjct: 197 TLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLS-GAESAHVLCIK 255
Query: 560 YNIDYGIEHYGCMVDLLGRTGNLDAAKQFIE 590
+D + ++ + G+TG + +A++ +
Sbjct: 256 IGLDLDLHLITALIGMYGKTGGISSARRIFD 286
>AT4G25270.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:12937253-12938836 REVERSE
Length = 527
Score = 246 bits (629), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 138/421 (32%), Positives = 235/421 (55%), Gaps = 9/421 (2%)
Query: 246 GKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKN--IVAWNAMIGGY 303
G +H + L ++ + + L+ +YA CG + A VF+ M+ ++ AWN++I GY
Sbjct: 111 GVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGY 170
Query: 304 AINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHL 363
A G + ++ +M ED + PD T +L +C G++ G+ IH +++ F +
Sbjct: 171 AELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDV 230
Query: 364 VLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQ 423
+ ALV MY KCG + A VF I K+ VSWN+++ Y+ +G EAL++F +
Sbjct: 231 YVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQN 290
Query: 424 TLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTA 483
++PD V I+S+L A + + +Q+H ++ + + +NA++ +Y+K G L A
Sbjct: 291 GIEPDKVAISSVL---ARVLSFKHGRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQA 347
Query: 484 RRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSIS 543
FD M ++ VSWN +I A++ + G ++ F +M + +P+ TFVS+LS C+ +
Sbjct: 348 CFIFDQMLERDTVSWNAIISAHSKNSNG---LKYFEQMHRANAKPDGITFVSVLSLCANT 404
Query: 544 GLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFI-EEMPLVPTARIWG 602
G+V +G LF+ M +Y ID +EHY CMV+L GR G ++ A I +EM L +WG
Sbjct: 405 GMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEAYSMIVQEMGLEAGPTVWG 464
Query: 603 SLLTASRNNNDIFFAEFAAKHILSHDNDNTGCYVLLANMYAEAGRWEDVEQIKLVMKKKG 662
+LL A + + E AA+ + + DN + LL +Y++A R EDVE+++ +M +G
Sbjct: 465 ALLYACYLHGNTDIGEVAAQRLFELEPDNEHNFELLIRIYSKAKRAEDVERVRQMMVDRG 524
Query: 663 L 663
L
Sbjct: 525 L 525
Score = 180 bits (457), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 103/328 (31%), Positives = 189/328 (57%), Gaps = 10/328 (3%)
Query: 59 NSLSLTRSLCEFVDS-GAMDNALYLFEKMNQPDT--YIWNVIIRGFSNKGLFQEVIDFYH 115
N+L ++ L S G + A +F++M++ D+ + WN +I G++ G +++ + Y
Sbjct: 125 NNLGISSKLVRLYASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYF 184
Query: 116 RMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFG 175
+M +G+ D FTFP V+KACG + S G+ +H L+K G D+YV N+L+ MY K G
Sbjct: 185 QMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCG 244
Query: 176 FVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLG 235
+ A VF+ +P +D VSWN M+ GY G ++L F+ M+ G +PD++++ S L
Sbjct: 245 DIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVLA 304
Query: 236 GCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVA 295
+ G+++H VIR G+E ++ V +LI +Y+K G++ A +F++M ++ V+
Sbjct: 305 RV---LSFKHGRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVS 361
Query: 296 WNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAI 355
WNA+I ++ N + L+ F ++M N PD IT +++L C+ G + +G+ +
Sbjct: 362 WNAIISAHSKNSNGLKYF---EQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMS 418
Query: 356 RKMFL-PHLVLETALVDMYGKCGQLKFA 382
++ + P + +V++YG+ G ++ A
Sbjct: 419 KEYGIDPKMEHYACMVNLYGRAGMMEEA 446
Score = 173 bits (438), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 116/419 (27%), Positives = 207/419 (49%), Gaps = 22/419 (5%)
Query: 129 FPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMP 188
F +++ C L + G +VH + L ++ + + L+ +Y G+ EVA +VF+ M
Sbjct: 95 FASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMS 154
Query: 189 LRD--LVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGG 246
RD +WN +++GY +G ++ + +M G KPDR + L C V+ G
Sbjct: 155 KRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIG 214
Query: 247 KEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAIN 306
+ IH +++ G D+ V +L+ MYAKCG + A VF+ + K+ V+WN+M+ GY +
Sbjct: 215 EAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHH 274
Query: 307 GHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLE 366
G E+ + M ++ + PD + + ++L F G+ +HG+ IR+ L +
Sbjct: 275 GLLHEALDIFRLMVQNGIEPDKVAISSVLARVLSFK---HGRQLHGWVIRRGMEWELSVA 331
Query: 367 TALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLK 426
AL+ +Y K GQL A +F ++ E++ VSWNAII+A+ +N L+ F + K
Sbjct: 332 NALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAH---SKNSNGLKYFEQMHRANAK 388
Query: 427 PDAVTIASILPAYAELATVSECKQIHAYITK-LELSSNTFTSNAIVYMYAKCGDLQTARR 485
PD +T S+L A V + +++ + ++K + +V +Y + G ++ A
Sbjct: 389 PDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEAY- 447
Query: 486 YFDSMSFKNL------VSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEP-NESTFVSLL 537
SM + + W ++ A +HG I R+ + +EP NE F L+
Sbjct: 448 ---SMIVQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQRLFE--LEPDNEHNFELLI 501
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 174/354 (49%), Gaps = 18/354 (5%)
Query: 333 NLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEK 392
+LL +C + G +H + +L + + LV +Y CG + A VF R++++
Sbjct: 97 SLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMSKR 156
Query: 393 NM--VSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQ 450
+ +WN++I+ Y + G+ E+A+ L+ + +KPD T +L A + +V +
Sbjct: 157 DSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEA 216
Query: 451 IHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGF 510
IH + K + + NA+V MYAKCGD+ AR FD + K+ VSWN+M+ Y HG
Sbjct: 217 IHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGL 276
Query: 511 GTISIQLFSRMKQNGIEPNESTFVSLLSSCSI--SGLVNEGWELFNSMKMDYNIDYGIEH 568
++ +F M QNGIEP++ S+L+ G GW + M+ + ++
Sbjct: 277 LHEALDIFRLMVQNGIEPDKVAISSVLARVLSFKHGRQLHGWVIRRGMEWELSVA----- 331
Query: 569 YGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTA-SRNNNDIFFAEFAAKHILSH 627
++ L + G L A ++M T W ++++A S+N+N + + F H +
Sbjct: 332 -NALIVLYSKRGQLGQACFIFDQMLERDTVS-WNAIISAHSKNSNGLKY--FEQMHRANA 387
Query: 628 DNDNTGCYVLLANMYAEAGRWEDVEQI-KLVMKKKGLAKTVD--CCTVESKGKS 678
D +V + ++ A G ED E++ L+ K+ G+ ++ C V G++
Sbjct: 388 KPDGI-TFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRA 440
>AT1G77170.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28998133-28999536 REVERSE
Length = 467
Score = 244 bits (624), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 127/372 (34%), Positives = 208/372 (55%), Gaps = 2/372 (0%)
Query: 296 WNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAI 355
WN ++ Y + L++ M ++PD ++ ++ + + GK +H A+
Sbjct: 85 WNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVAV 144
Query: 356 RKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALE 415
R F+ E+ + +Y K G+ + A VF E+ + SWNAII GR EA+E
Sbjct: 145 RLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVE 204
Query: 416 LFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYI--TKLELSSNTFTSNAIVYM 473
+F ++ L+PD T+ S+ + L +S Q+H + K E S+ N+++ M
Sbjct: 205 MFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDM 264
Query: 474 YAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTF 533
Y KCG + A F+ M +N+VSW++MI+ YA +G +++ F +M++ G+ PN+ TF
Sbjct: 265 YGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITF 324
Query: 534 VSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMP 593
V +LS+C GLV EG F MK ++ ++ G+ HYGC+VDLL R G L AK+ +EEMP
Sbjct: 325 VGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMP 384
Query: 594 LVPTARIWGSLLTASRNNNDIFFAEFAAKHILSHDNDNTGCYVLLANMYAEAGRWEDVEQ 653
+ P +WG L+ D+ AE+ A +++ + N G YV+LAN+YA G W+DVE+
Sbjct: 385 MKPNVMVWGCLMGGCEKFGDVEMAEWVAPYMVELEPWNDGVYVVLANVYALRGMWKDVER 444
Query: 654 IKLVMKKKGLAK 665
++ +MK K +AK
Sbjct: 445 VRKLMKTKKVAK 456
Score = 169 bits (428), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 106/329 (32%), Positives = 170/329 (51%), Gaps = 4/329 (1%)
Query: 89 PDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKV 148
P ++WN I+R + + I Y M + D ++ P VIKA ++ F GK++
Sbjct: 80 PIAFLWNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKEL 139
Query: 149 HGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDG 208
H +++G D + + I +Y K G E A KVF+ P R L SWN ++ G G
Sbjct: 140 HSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRA 199
Query: 209 LKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLE--LDIMVQT 266
+++ F +M G +PD +M+S C + ++H V++ E DIM+
Sbjct: 200 NEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLN 259
Query: 267 SLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIP 326
SLIDMY KCG++D A +F EM +N+V+W++MI GYA NG+ LE+ C ++M+E + P
Sbjct: 260 SLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRP 319
Query: 327 DAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFL-PHLVLETALVDMYGKCGQLKFAECV 385
+ IT + +L +C G + EGK + L P L +VD+ + GQLK A+ V
Sbjct: 320 NKITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKV 379
Query: 386 FGRINEK-NMVSWNAIIAAYVQNGRNEEA 413
+ K N++ W ++ + G E A
Sbjct: 380 VEEMPMKPNVMVWGCLMGGCEKFGDVEMA 408
Score = 122 bits (306), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 132/238 (55%), Gaps = 6/238 (2%)
Query: 70 FVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTF 129
+ +G +NA +F++ + WN II G ++ G E ++ + M+ G+ D+FT
Sbjct: 162 YCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTM 221
Query: 130 PFVIKACGRLLSFIEGKKVHGKLIKIGLDR--DIYVCNSLIDMYFKFGFVEVAEKVFEAM 187
V +CG L ++H +++ + DI + NSLIDMY K G +++A +FE M
Sbjct: 222 VSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEM 281
Query: 188 PLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGK 247
R++VSW+ M+ GY G+ L++L CF++M G +P++++ + L C G V GK
Sbjct: 282 RQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGK 341
Query: 248 EIHCQVIRNGLELDIMVQ--TSLIDMYAKCGKVDYAERVFNEMTCK-NIVAWNAMIGG 302
+ ++++ EL+ + ++D+ ++ G++ A++V EM K N++ W ++GG
Sbjct: 342 -TYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGG 398
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 72/147 (48%), Gaps = 24/147 (16%)
Query: 74 GAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVI 133
G MD A ++FE+M Q + W+ +I G++ G E ++ + +M G+ + TF V+
Sbjct: 269 GRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVL 328
Query: 134 KACGRLLSFIEGKKVHGKLIKIG------------LDRDIYVCNSLIDMYFKFGFVEVAE 181
AC VHG L++ G L+ + ++D+ + G ++ A+
Sbjct: 329 SAC-----------VHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAK 377
Query: 182 KVFEAMPLR-DLVSWNCMVNGYRVIGD 207
KV E MP++ +++ W C++ G GD
Sbjct: 378 KVVEEMPMKPNVMVWGCLMGGCEKFGD 404
>AT1G05750.1 | Symbols: PDE247, CLB19 | PDE247 (pigment defective
247) | chr1:1721523-1723025 FORWARD
Length = 500
Score = 244 bits (623), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 146/451 (32%), Positives = 231/451 (51%), Gaps = 35/451 (7%)
Query: 286 NEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKF--GT 343
N+ T + V+W + I NG E+ M + P+ IT I LL C F G+
Sbjct: 29 NQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGS 88
Query: 344 LLEGKCIHGYAIR-KMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIA 402
G +HGYA + + H+++ TA++ MY K G+ K A VF + +KN V+WN +I
Sbjct: 89 EALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMID 148
Query: 403 AYVQNGR-------------------------------NEEALELFHCLRNQTLKPDAVT 431
Y+++G+ EEAL F ++ +KPD V
Sbjct: 149 GYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVA 208
Query: 432 IASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMS 491
I + L A L +S +H Y+ + +N SN+++ +Y +CG ++ AR+ F +M
Sbjct: 209 IIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNME 268
Query: 492 FKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWE 551
+ +VSWN++I+ +A +G S+ F +M++ G +P+ TF L++CS GLV EG
Sbjct: 269 KRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLR 328
Query: 552 LFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTASRNN 611
F MK DY I IEHYGC+VDL R G L+ A + ++ MP+ P + GSLL A N+
Sbjct: 329 YFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNH 388
Query: 612 -NDIFFAEFAAKHILSHDNDNTGCYVLLANMYAEAGRWEDVEQIKLVMKKKGLAKTVDCC 670
N+I AE KH+ + + YV+L+NMYA G+WE +++ MK GL K
Sbjct: 389 GNNIVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFS 448
Query: 671 TVESKGKSQKFINNNKSHQQAYMIYDVLDII 701
++E F+ + +H + I +VL++I
Sbjct: 449 SIEIDDCMHVFMAGDNAHVETTYIREVLELI 479
Score = 164 bits (414), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 126/463 (27%), Positives = 212/463 (45%), Gaps = 82/463 (17%)
Query: 91 TYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIE--GKKV 148
T W I + G E + M G+ ++ TF ++ CG S E G +
Sbjct: 36 TVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLL 95
Query: 149 HGKLIKIGLDRDIYVC--------------------------------NSLIDMYFKFGF 176
HG K+GLDR+ + N++ID Y + G
Sbjct: 96 HGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQ 155
Query: 177 VEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGG 236
V+ A K+F+ MP RDL+SW M+NG+ G ++L+ F+EM G KPD +++I++L
Sbjct: 156 VDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNA 215
Query: 237 CSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAW 296
C+ + G +H V+ + ++ V SLID+Y +CG V++A +VF M + +V+W
Sbjct: 216 CTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSW 275
Query: 297 NAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIR 356
N++I G+A NG+ ES ++MQE PDA+T L +CS G + EG + + I
Sbjct: 276 NSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEG--LRYFQIM 333
Query: 357 K---MFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEA 413
K P + LVD+Y + G+L E+A
Sbjct: 334 KCDYRISPRIEHYGCLVDLYSRAGRL-------------------------------EDA 362
Query: 414 LELFHCLRNQTLKPDAVTIASILPAYAELA-TVSECKQIHAYITKLELSSNTFTSNAIVY 472
L+L +++ +KP+ V I S+L A + + +++ ++T L + S+ SN ++
Sbjct: 363 LKL---VQSMPMKPNEVVIGSLLAACSNHGNNIVLAERLMKHLTDLNVKSH---SNYVIL 416
Query: 473 --MYAKCGDLQTA---RRYFDSMSFKNLVSWNTMIMAYAIHGF 510
MYA G + A RR + K ++++ + +H F
Sbjct: 417 SNMYAADGKWEGASKMRRKMKGLGLKKQPGFSSIEIDDCMHVF 459
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 125/240 (52%), Gaps = 5/240 (2%)
Query: 55 MIKPNSLSLTRSLCEFVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFY 114
M NS++ + ++ SG +DNA +F+KM + D W +I GF KG +E + ++
Sbjct: 135 MEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWF 194
Query: 115 HRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKF 174
M+ G+ D + AC L + G VH ++ ++ V NSLID+Y +
Sbjct: 195 REMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRC 254
Query: 175 GFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSL 234
G VE A +VF M R +VSWN ++ G+ G+ +SL+ F++M G KPD ++ +L
Sbjct: 255 GCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGAL 314
Query: 235 GGCS-IGCCVRGGKEIHCQVIRNGLELDIMVQ--TSLIDMYAKCGKVDYAERVFNEMTCK 291
CS +G G + + Q+++ + ++ L+D+Y++ G+++ A ++ M K
Sbjct: 315 TACSHVGLVEEGLR--YFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMK 372
>AT1G43980.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:16685832-16689502 REVERSE
Length = 633
Score = 242 bits (617), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 157/552 (28%), Positives = 281/552 (50%), Gaps = 37/552 (6%)
Query: 145 GKKVHGKLIKIGLDRDIYVCNSLIDMYFKFG--------FVEVAEK-------------- 182
K VH +L++ G R Y N + +YFK G F ++ +K
Sbjct: 23 AKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDIPDKNTITWNVCLKGLFK 82
Query: 183 ---------VFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISS 233
+F+ MP RD+VSWN M++G G + F +M +P + S
Sbjct: 83 NGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFT-FSI 141
Query: 234 LGGCSIGCCVRGGKEIHCQVIRNGL-ELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKN 292
L S+ CVR G++IH I +G+ +++V S++DMY + G DYA VF M ++
Sbjct: 142 LA--SLVTCVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRD 199
Query: 293 IVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHG 352
+V+WN +I + +G+ + M+E + PD T+ ++ CS L +GK
Sbjct: 200 VVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALA 259
Query: 353 YAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEE 412
I+ FL + ++ A +DM+ KC +L + +F + + + V N++I +Y + E+
Sbjct: 260 LCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCCGED 319
Query: 413 ALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVY 472
AL LF Q+++PD T +S+L + + + +H+ + KL +T + +++
Sbjct: 320 ALRLFILAMTQSVRPDKFTFSSVLSSMNAV-MLDHGADVHSLVIKLGFDLDTAVATSLME 378
Query: 473 MYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQN-GIEPNES 531
MY K G + A F K+L+ WNT+IM A + S+ +F+++ N ++P+
Sbjct: 379 MYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIFNQLLMNQSLKPDRV 438
Query: 532 TFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEE 591
T + +L +C +G VNEG ++F+SM+ + ++ G EHY C+++LL R G ++ AK ++
Sbjct: 439 TLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEHYACIIELLCRVGMINEAKDIADK 498
Query: 592 MPLVPTARIWGSLLTASRNNNDIFFAEFAAKHILSHDNDNTGCYVLLANMYAEAGRWEDV 651
+P P++ IW +L AS + D AE AK +L + ++ Y++L +Y RWE+
Sbjct: 499 IPFEPSSHIWEPILCASLDLGDTRLAETVAKTMLESEPKSSFPYLVLIKIYEMTWRWENS 558
Query: 652 EQIKLVMKKKGL 663
+++ M + L
Sbjct: 559 VKLRYAMNEHKL 570
Score = 165 bits (417), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 125/443 (28%), Positives = 218/443 (49%), Gaps = 13/443 (2%)
Query: 58 PNSLSLTRSLC--EFVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYH 115
P+ ++T ++C +G ++NAL LF++M + D WN +I G + G + I +
Sbjct: 66 PDKNTITWNVCLKGLFKNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFF 125
Query: 116 RMEYEGIGIDNFTFPFV--IKACGRLLSFIEGKKVHGKLIKIGLDR-DIYVCNSLIDMYF 172
M+ I FTF + + C R G+++HG I G+ R ++ V NS++DMY
Sbjct: 126 DMQRWEIRPTEFTFSILASLVTCVR-----HGEQIHGNAICSGVSRYNLVVWNSVMDMYR 180
Query: 173 KFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMIS 232
+ G + A VF M RD+VSWNC++ G+ +L F M + +PD ++
Sbjct: 181 RLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSM 240
Query: 233 SLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKN 292
+ CS + GK+ I+ G + +V + IDM++KC ++D + ++F E+ +
Sbjct: 241 VVSICSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWD 300
Query: 293 IVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHG 352
V N+MIG Y+ + ++ ++ PD T ++L S + L G +H
Sbjct: 301 SVLCNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSSMNAV-MLDHGADVHS 359
Query: 353 YAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEE 412
I+ F + T+L++MY K G + A VF + + K+++ WN +I +N R E
Sbjct: 360 LVIKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVE 419
Query: 413 ALELF-HCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLE-LSSNTFTSNAI 470
+L +F L NQ+LKPD VT+ IL A V+E QI + + K ++ I
Sbjct: 420 SLAIFNQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEHYACI 479
Query: 471 VYMYAKCGDLQTARRYFDSMSFK 493
+ + + G + A+ D + F+
Sbjct: 480 IELLCRVGMINEAKDIADKIPFE 502
>AT3G21470.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:7563746-7565074 FORWARD
Length = 442
Score = 241 bits (615), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 143/438 (32%), Positives = 243/438 (55%), Gaps = 39/438 (8%)
Query: 263 MVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQED 322
MV +SLI MY KCG V A +VF+EM +N+ WNAMIGGY NG ++ +E
Sbjct: 1 MVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNG---DAVLASGLFEEI 57
Query: 323 NLIPDAITMINLLPSCSK----------FGTL-LEGKCIHGYAI--------RKM----- 358
++ + +T I ++ K F + E K + +++ RKM
Sbjct: 58 SVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWSVMLGVYVNNRKMEDARK 117
Query: 359 FLPHLVLETALV-----DMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEA 413
F + + A V Y + G + A +F R+ +++V WN +IA Y QNG +++A
Sbjct: 118 FFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDA 177
Query: 414 LELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYM 473
++ F ++ + +PDAVT++SIL A A+ + +++H+ I + N F SNA++ M
Sbjct: 178 IDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDM 237
Query: 474 YAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTF 533
YAKCGDL+ A F+S+S +++ N+MI AIHG G ++++FS M+ ++P+E TF
Sbjct: 238 YAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITF 297
Query: 534 VSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMP 593
+++L++C G + EG ++F+ MK ++ ++H+GC++ LLGR+G L A + ++EM
Sbjct: 298 IAVLTACVHGGFLMEGLKIFSEMKTQ-DVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMH 356
Query: 594 LVPTARIWGSLLTASRNNNDIFFAEFAAKHILSHDNDNTGCY-----VLLANMYAEAGRW 648
+ P + G+LL A + + D AE K I+ T Y ++N+YA RW
Sbjct: 357 VKPNDTVLGALLGACKVHMDTEMAEQVMK-IIETAGSITNSYSENHLASISNLYAHTERW 415
Query: 649 EDVEQIKLVMKKKGLAKT 666
+ E +++ M+K+GL K+
Sbjct: 416 QTAEALRVEMEKRGLEKS 433
Score = 142 bits (359), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 97/357 (27%), Positives = 168/357 (47%), Gaps = 26/357 (7%)
Query: 163 VCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLG 222
V +SLI MY K G V A KVF+ MP R++ +WN M+ GY GD + + F+E+
Sbjct: 2 VGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGLFEEISVCR 61
Query: 223 EKPDRLSMISSLG-------------------------GCSIGCCVRGGK-EIHCQVIRN 256
+ MI G +G V K E + +
Sbjct: 62 NTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWSVMLGVYVNNRKMEDARKFFED 121
Query: 257 GLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCL 316
E + V + ++ Y + G V A +F + +++V WN +I GYA NG+ ++
Sbjct: 122 IPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAF 181
Query: 317 KRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKC 376
MQ + PDA+T+ ++L +C++ G L G+ +H + + + AL+DMY KC
Sbjct: 182 FNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKC 241
Query: 377 GQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASIL 436
G L+ A VF I+ +++ N++I+ +G+ +EALE+F + + LKPD +T ++L
Sbjct: 242 GDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVL 301
Query: 437 PAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFK 493
A + E +I + + ++ N ++++ + G L+ A R M K
Sbjct: 302 TACVHGGFLMEGLKIFSEMKTQDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMHVK 358
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 128/266 (48%), Gaps = 6/266 (2%)
Query: 38 RKSNPTKKQMSETPKRGMIKPNSLSLTRSLCEFVDSGAMDNALYLFEKMNQPDTYIWNVI 97
RK +K + P++ N+ + + + G + A +F ++ D IWN +
Sbjct: 110 RKMEDARKFFEDIPEK-----NAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTL 164
Query: 98 IRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGL 157
I G++ G + ID + M+ EG D T ++ AC + G++VH + G+
Sbjct: 165 IAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGI 224
Query: 158 DRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKE 217
+ + +V N+LIDMY K G +E A VFE++ +R + N M++ + G G ++L F
Sbjct: 225 ELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFST 284
Query: 218 MLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGK 277
M L KPD ++ I+ L C G + G +I ++ ++ ++ LI + + GK
Sbjct: 285 MESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQDVKPNVKHFGCLIHLLGRSGK 344
Query: 278 VDYAERVFNEMTCK-NIVAWNAMIGG 302
+ A R+ EM K N A++G
Sbjct: 345 LKEAYRLVKEMHVKPNDTVLGALLGA 370
>AT5G08310.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:2670134-2675254 REVERSE
Length = 1280
Score = 240 bits (612), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 173/649 (26%), Positives = 305/649 (46%), Gaps = 75/649 (11%)
Query: 125 DNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVA---- 180
D + +IKA + +E + +++ GL + NS+ID + K G ++
Sbjct: 613 DVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCI 672
Query: 181 EKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGG-CSI 239
+++E D++++ +++G G +++ + EM G P+R++ ++ + G C
Sbjct: 673 VRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKC 732
Query: 240 GCC----------------------------------VRGGKEIHCQVIRNGLELDIMVQ 265
G + G I +++ G + V
Sbjct: 733 GWSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKG-RFPVSVD 791
Query: 266 TSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLI 325
+ + VDYA + ++++ WN +I G++ + + +S + +M L+
Sbjct: 792 RNYMLAVNVTSDVDYAYKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLL 851
Query: 326 PDAITMINLLPSCSKFGTLLEGKCIHGYAI---------------------------RKM 358
PD +T L+ S S+ G +H + RK+
Sbjct: 852 PDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKL 911
Query: 359 F--LPH--LVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEAL 414
F +PH LV +++D Y K G + A VF ++E+++V+W+++I YV+ G +AL
Sbjct: 912 FDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKAL 971
Query: 415 ELF-HCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYM 473
E+F +R + K + VT+ S++ A A L ++ K +H YI + L +++ M
Sbjct: 972 EIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDM 1031
Query: 474 YAKCGDLQTARRYFDSMSFK--NLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNES 531
YAKCG + A F S K + + WN +I A HGF S+QLF +M+++ I+P+E
Sbjct: 1032 YAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEI 1091
Query: 532 TFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEE 591
TF+ LL++CS GLV E W F S+K + + EHY CMVD+L R G + A FI E
Sbjct: 1092 TFLCLLAACSHGGLVKEAWHFFKSLK-ESGAEPKSEHYACMVDVLSRAGLVKDAHDFISE 1150
Query: 592 MPLVPTARIWGSLLTASRNNNDIFFAEFAAKHILSHDNDNTGCYVLLANMYAEAGRWEDV 651
MP+ PT + G+LL N+ ++ AE K ++ N G YV LAN+YA ++
Sbjct: 1151 MPIKPTGSMLGALLNGCINHGNLELAETVGKKLIELQPHNDGRYVGLANVYAINKQFRAA 1210
Query: 652 EQIKLVMKKKGLAKTVDCCTVESKGKSQKFINNNKSHQQAYMIYDVLDI 700
++ M+KKG+ K ++ G +FI ++K+H + IY VL +
Sbjct: 1211 RSMREAMEKKGVKKIAGHSILDLDGTRHRFIAHDKTHFHSDKIYAVLQL 1259
Score = 171 bits (433), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 103/306 (33%), Positives = 160/306 (52%), Gaps = 34/306 (11%)
Query: 76 MDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKA 135
+D A K++ P Y WN +IRGFSN ++ I Y +M G+ D+ T+PF++K+
Sbjct: 804 VDYAYKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKS 863
Query: 136 CGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPL------ 189
RL + G +H ++K GL+ D+++CN+LI MY F A K+F+ MP
Sbjct: 864 SSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTW 923
Query: 190 -------------------------RDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLG-E 223
RD+V+W+ M++GY G+ K+L F +M+ +G
Sbjct: 924 NSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSS 983
Query: 224 KPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAER 283
K + ++M+S + C+ + GK +H ++ L L +++QTSLIDMYAKCG + A
Sbjct: 984 KANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWS 1043
Query: 284 VFNEMTCKNIVA--WNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKF 341
VF + K A WNA+IGG A +G ES +M+E + PD IT + LL +CS
Sbjct: 1044 VFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHG 1103
Query: 342 GTLLEG 347
G + E
Sbjct: 1104 GLVKEA 1109
>AT1G13410.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 17 plant
structures; EXPRESSED DURING: 8 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT4G02750.1); Has 13539 Blast hits to 4793
proteins in 111 species: Archae - 0; Bacteria - 0;
Metazoa - 25; Fungi - 35; Plants - 13298; Viruses - 0;
Other Eukaryotes - 181 (source: NCBI BLink). |
chr1:4601526-4603174 FORWARD
Length = 474
Score = 239 bits (609), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 140/436 (32%), Positives = 229/436 (52%), Gaps = 10/436 (2%)
Query: 265 QTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNL 324
Q L M G + A +VF EM KN+V W +MI GY +N + + +R + +
Sbjct: 31 QMFLFGMLCLMGVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSA----RRYFDLSP 86
Query: 325 IPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAEC 384
D + ++ + G +LE + + +M ++ +++ Y G ++ E
Sbjct: 87 ERDIVLWNTMISGYIEMGNMLEARSL----FDQMPCRDVMSWNTVLEGYANIGDMEACER 142
Query: 385 VFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQ-TLKPDAVTIASILPAYAELA 443
VF + E+N+ SWN +I Y QNGR E L F + ++ ++ P+ T+ +L A A+L
Sbjct: 143 VFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLG 202
Query: 444 TVSECKQIHAYITKLELSS-NTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMI 502
K +H Y L + + NA++ MY KCG ++ A F + ++L+SWNTMI
Sbjct: 203 AFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMI 262
Query: 503 MAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNI 562
A HG GT ++ LF MK +GI P++ TFV +L +C GLV +G FNSM D++I
Sbjct: 263 NGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSI 322
Query: 563 DYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTASRNNNDIFFAEFAAK 622
IEH GC+VDLL R G L A +FI +MP+ A IW +LL AS+ + E A +
Sbjct: 323 MPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVALE 382
Query: 623 HILSHDNDNTGCYVLLANMYAEAGRWEDVEQIKLVMKKKGLAKTVDCCTVESKGKSQKFI 682
++ + N +V+L+N+Y +AGR++D ++K+ M+ G K +E+ KF
Sbjct: 383 ELIKLEPRNPANFVMLSNIYGDAGRFDDAARLKVAMRDTGFKKEAGVSWIETDDGLVKFY 442
Query: 683 NNNKSHQQAYMIYDVL 698
++ + H + + +L
Sbjct: 443 SSGEKHPRTEELQRIL 458
Score = 150 bits (378), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 110/400 (27%), Positives = 192/400 (48%), Gaps = 23/400 (5%)
Query: 167 LIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPD 226
L M G + A KVF M +++V W M+NGY + K L+ + L + D
Sbjct: 34 LFGMLCLMGVIASANKVFCEMVEKNVVLWTSMINGYLLN----KDLVSARRYFDLSPERD 89
Query: 227 RLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLEL-DIMVQTSLIDMYAKCGKVDYAERVF 285
+ L I + G + + + + + D+M ++++ YA G ++ ERVF
Sbjct: 90 IV-----LWNTMISGYIEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVF 144
Query: 286 NEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRM-QEDNLIPDAITMINLLPSCSKFGTL 344
++M +N+ +WN +I GYA NG E KRM E +++P+ TM +L +C+K G
Sbjct: 145 DDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAF 204
Query: 345 LEGKCIHGYAIRKMFLPHLV-LETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAA 403
GK +H Y + V ++ AL+DMYGKCG ++ A VF I ++++SWN +I
Sbjct: 205 DFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMING 264
Query: 404 YVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSE-CKQIHAYITKLELSS 462
+G EAL LFH ++N + PD VT +L A + V + ++ T +
Sbjct: 265 LAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMP 324
Query: 463 NTFTSNAIVYMYAKCGDLQTARRYFDSMSFK-NLVSWNTMIMAYAIH---GFGTISIQLF 518
+V + ++ G L A + + M K + V W T++ A ++ G ++++
Sbjct: 325 EIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVALEEL 384
Query: 519 SRMKQNGIEP-NESTFVSLLSSCSISGLVNEGWELFNSMK 557
++ EP N + FV L + +G ++ L +M+
Sbjct: 385 IKL-----EPRNPANFVMLSNIYGDAGRFDDAARLKVAMR 419
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 148/302 (49%), Gaps = 38/302 (12%)
Query: 26 APKRDL-----LVNPRIRKSN--PTKKQMSETPKRGMIKPNSLSLTRSLCEFVDSGAMDN 78
+P+RD+ +++ I N + + P R ++ N++ L + + G M+
Sbjct: 85 SPERDIVLWNTMISGYIEMGNMLEARSLFDQMPCRDVMSWNTV-----LEGYANIGDMEA 139
Query: 79 ALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDN-FTFPFVIKACG 137
+F+ M + + + WN +I+G++ G EV+ + RM EG + N T V+ AC
Sbjct: 140 CERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACA 199
Query: 138 RLLSFIEGKKVHGKLIKIGLDR-DIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWN 196
+L +F GK VH +G ++ D+ V N+LIDMY K G +E+A +VF+ + RDL+SWN
Sbjct: 200 KLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWN 259
Query: 197 CMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRN 256
M+NG G G ++L F EM G PD+++ + L C H ++ +
Sbjct: 260 TMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACK-----------HMGLVED 308
Query: 257 GL--------ELDIMVQTS----LIDMYAKCGKVDYAERVFNEMTCK-NIVAWNAMIGGY 303
GL + IM + ++D+ ++ G + A N+M K + V W ++G
Sbjct: 309 GLAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGAS 368
Query: 304 AI 305
+
Sbjct: 369 KV 370
Score = 112 bits (280), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 122/249 (48%), Gaps = 4/249 (1%)
Query: 159 RDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEM 218
RD+ N++++ Y G +E E+VF+ MP R++ SWN ++ GY G + L FK M
Sbjct: 119 RDVMSWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRM 178
Query: 219 LGLGEK-PDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGL-ELDIMVQTSLIDMYAKCG 276
+ G P+ +M L C+ GK +H G ++D+ V+ +LIDMY KCG
Sbjct: 179 VDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCG 238
Query: 277 KVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLP 336
++ A VF + +++++WN MI G A +GH E+ M+ + PD +T + +L
Sbjct: 239 AIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLC 298
Query: 337 SCSKFGTLLEGKCIHGYAIRKM-FLPHLVLETALVDMYGKCGQLKFAECVFGRINEK-NM 394
+C G + +G +P + +VD+ + G L A ++ K +
Sbjct: 299 ACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADA 358
Query: 395 VSWNAIIAA 403
V W ++ A
Sbjct: 359 VIWATLLGA 367
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 78/166 (46%), Gaps = 3/166 (1%)
Query: 74 GAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVI 133
GA++ A+ +F+ + + D WN +I G + G E ++ +H M+ GI D TF V+
Sbjct: 238 GAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVL 297
Query: 134 KACGRLLSFIEGKKVHGKLI-KIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLR-D 191
AC + +G + + +I C ++D+ + GF+ A + MP++ D
Sbjct: 298 CACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKAD 357
Query: 192 LVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEK-PDRLSMISSLGG 236
V W ++ +V + +E++ L + P M+S++ G
Sbjct: 358 AVIWATLLGASKVYKKVDIGEVALEELIKLEPRNPANFVMLSNIYG 403
>AT5G08510.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:2753099-2754731 FORWARD
Length = 511
Score = 238 bits (607), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 148/501 (29%), Positives = 254/501 (50%), Gaps = 50/501 (9%)
Query: 245 GGKEIHCQVIRNGLE--LDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGG 302
G K++H +R G++ D++ + LI + YA ++F+ +N +I
Sbjct: 3 GIKQLHAHCLRTGVDETKDLLQRLLLIP------NLVYARKLFDHHQNSCTFLYNKLIQA 56
Query: 303 YAINGHFLESFTCLKRMQEDNLIP-----------------------------------D 327
Y ++ ES + D L P D
Sbjct: 57 YYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGFESD 116
Query: 328 AITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFG 387
+ L+ + +K G L C +M + + A++ Y + G +K A +F
Sbjct: 117 SFCCTTLITAYAKLGAL----CCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFD 172
Query: 388 RINEKNMVSWNAIIAAYVQNGRNEEALELFHCL-RNQTLKPDAVTIASILPAYAELATVS 446
+ KN+ SW +I+ + QNG EAL++F C+ +++++KP+ +T+ S+LPA A L +
Sbjct: 173 SMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELE 232
Query: 447 ECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSM-SFKNLVSWNTMIMAY 505
+++ Y + N + NA + MY+KCG + A+R F+ + + +NL SWN+MI +
Sbjct: 233 IGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSL 292
Query: 506 AIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYG 565
A HG ++ LF++M + G +P+ TFV LL +C G+V +G ELF SM+ + I
Sbjct: 293 ATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPK 352
Query: 566 IEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTASRNNNDIFFAEFAAKHIL 625
+EHYGCM+DLLGR G L A I+ MP+ P A +WG+LL A + ++ AE A++ +
Sbjct: 353 LEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEIASEALF 412
Query: 626 SHDNDNTGCYVLLANMYAEAGRWEDVEQIKLVMKKKGLAKTVDCCT-VESKGKSQKFINN 684
+ N G V+++N+YA +W+ V +++ +MKK+ + K VE KF
Sbjct: 413 KLEPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSYFVEVGVDVHKFTVE 472
Query: 685 NKSHQQAYMIYDVLDIILKKI 705
+KSH ++Y IY VL+ I +++
Sbjct: 473 DKSHPRSYEIYQVLEEIFRRM 493
Score = 140 bits (352), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 108/441 (24%), Positives = 202/441 (45%), Gaps = 44/441 (9%)
Query: 146 KKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVI 205
K++H ++ G+D L+ + A K+F+ +N ++ Y V
Sbjct: 5 KQLHAHCLRTGVDET----KDLLQRLLLIPNLVYARKLFDHHQNSCTFLYNKLIQAYYVH 60
Query: 206 GDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQ 265
+S++ + + G +P + + R + +H Q R+G E D
Sbjct: 61 HQPHESIVLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGFESDSFCC 120
Query: 266 TSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGY---------------------- 303
T+LI YAK G + A RVF+EM+ +++ WNAMI GY
Sbjct: 121 TTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKNVT 180
Query: 304 ---------AINGHFLESFTCLKRMQEDNLI-PDAITMINLLPSCSKFGTLLEGKCIHGY 353
+ NG++ E+ M++D + P+ IT++++LP+C+ G L G+ + GY
Sbjct: 181 SWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEGY 240
Query: 354 AIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRI-NEKNMVSWNAIIAAYVQNGRNEE 412
A F ++ + A ++MY KCG + A+ +F + N++N+ SWN++I + +G+++E
Sbjct: 241 ARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKHDE 300
Query: 413 ALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKL-ELSSNTFTSNAIV 471
AL LF + + KPDAVT +L A V + +++ + ++ ++S ++
Sbjct: 301 ALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHYGCMI 360
Query: 472 YMYAKCGDLQTARRYFDSMSFK-NLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNE 530
+ + G LQ A +M K + V W T++ A + H G + I + +EP
Sbjct: 361 DLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFH--GNVEIAEIASEALFKLEPTN 418
Query: 531 STFVSLLSSCSISGLVNEGWE 551
++S+ + NE W+
Sbjct: 419 PGNCVIMSNIYAA---NEKWD 436
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 96/373 (25%), Positives = 174/373 (46%), Gaps = 41/373 (10%)
Query: 79 ALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGR 138
A LF+ T+++N +I+ + E I Y+ + ++G+ + TF F+ A
Sbjct: 35 ARKLFDHHQNSCTFLYNKLIQAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASAS 94
Query: 139 LLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCM 198
S + +H + + G + D + C +LI Y K G + A +VF+ M RD+ WN M
Sbjct: 95 FSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAM 154
Query: 199 VNGYRVIGD----------------------------------GLKSLMCFKEMLGLGEK 224
+ GY+ GD LK +C ++ + K
Sbjct: 155 ITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSV--K 212
Query: 225 PDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERV 284
P+ ++++S L C+ + G+ + NG +I V + I+MY+KCG +D A+R+
Sbjct: 213 PNHITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRL 272
Query: 285 FNEM-TCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGT 343
F E+ +N+ +WN+MIG A +G E+ T +M + PDA+T + LL +C G
Sbjct: 273 FEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGM 332
Query: 344 LLEGKCIHGY--AIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEK-NMVSWNAI 400
+++G+ + + K+ P L ++D+ G+ G+L+ A + + K + V W +
Sbjct: 333 VVKGQELFKSMEEVHKIS-PKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTL 391
Query: 401 IAAYVQNGRNEEA 413
+ A +G E A
Sbjct: 392 LGACSFHGNVEIA 404
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 120/238 (50%), Gaps = 4/238 (1%)
Query: 74 GAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYE-GIGIDNFTFPFV 132
G M A+ LF+ M + + W +I GFS G + E + + ME + + ++ T V
Sbjct: 162 GDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSV 221
Query: 133 IKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMP-LRD 191
+ AC L G+++ G + G +IYVCN+ I+MY K G ++VA+++FE + R+
Sbjct: 222 LPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRN 281
Query: 192 LVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHC 251
L SWN M+ G ++L F +ML GEKPD ++ + L C G V G+E+
Sbjct: 282 LCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFK 341
Query: 252 QVIR-NGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCK-NIVAWNAMIGGYAING 307
+ + + + +ID+ + GK+ A + M K + V W ++G + +G
Sbjct: 342 SMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHG 399
>AT5G66500.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:26548076-26549674 REVERSE
Length = 532
Score = 236 bits (602), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 155/529 (29%), Positives = 277/529 (52%), Gaps = 23/529 (4%)
Query: 150 GKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGL 209
G+ I++G + + N ++ F F A+ +F+ +P RDL S N ++ + G+
Sbjct: 8 GRFIRLG-NVTVKSTNLVLRCVFIRNFATHADHLFDELPQRDLSSLNSQLSSHLRSGNPN 66
Query: 210 KSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLI 269
+L F ++ + LG CS+ G+++H +I+ G E + +T+LI
Sbjct: 67 DTLALFLQIHRASPDLSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGTISKTALI 126
Query: 270 DMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAI 329
DMY+K G + + RVF + K++V+WNA++ G+ NG E+ M + +
Sbjct: 127 DMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEISEF 186
Query: 330 TMINLLPSCSKFGTLLEGKCIHGYAI---RKMFLPHLVLETALVDMYGKCGQLKFAECVF 386
T+ +++ +C+ L +GK +H + R + +VL TA++ Y G + A V+
Sbjct: 187 TLSSVVKTCASLKILQQGKQVHAMVVVTGRDL----VVLGTAMISFYSSVGLINEAMKVY 242
Query: 387 GRIN-EKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATV 445
+N + V N++I+ ++N +EA L R P+ ++S L ++ + +
Sbjct: 243 NSLNVHTDEVMLNSLISGCIRNRNYKEAFLLMSRQR-----PNVRVLSSSLAGCSDNSDL 297
Query: 446 SECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAY 505
KQIH + S++ N ++ MY KCG + AR F ++ K++VSW +MI AY
Sbjct: 298 WIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAY 357
Query: 506 AIHGFGTISIQLFSRM--KQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNID 563
A++G G ++++F M + +G+ PN TF+ ++S+C+ +GLV EG E F MK Y +
Sbjct: 358 AVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMMKEKYRLV 417
Query: 564 YGIEHYGCMVDLLGRTGNLDAAKQFIEEM-----PLVPTARIWGSLLTASRNNNDIFFAE 618
G EHY C +D+L + G + + +E M +P A IW ++L+A N D+ E
Sbjct: 418 PGTEHYVCFIDILSKAGETEEIWRLVERMMENDNQSIPCA-IWVAVLSACSLNMDLTRGE 476
Query: 619 FAAKHILSHDN-DNTGCYVLLANMYAEAGRWEDVEQIKLVMKKKGLAKT 666
+ A+ ++ +N YVL++N YA G+W+ VE+++ +K KGL KT
Sbjct: 477 YVARRLMEETGPENASIYVLVSNFYAAMGKWDVVEELRGKLKNKGLVKT 525
Score = 169 bits (428), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 124/428 (28%), Positives = 216/428 (50%), Gaps = 13/428 (3%)
Query: 68 CEFVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNF 127
C F+ + A +A +LF+++ Q D N + G + + + ++ + +
Sbjct: 27 CVFIRNFA-THADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPDLSSH 85
Query: 128 TFPFVIKACGRLLSFIE-GKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEA 186
TF V+ AC LLS+ E G++VH +IK G + +LIDMY K+G + + +VFE+
Sbjct: 86 TFTPVLGACS-LLSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFES 144
Query: 187 MPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGG 246
+ +DLVSWN +++G+ G G ++L F M + ++ S + C+ ++ G
Sbjct: 145 VEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQG 204
Query: 247 KEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTC-KNIVAWNAMIGGYAI 305
K++H V+ G +L +++ T++I Y+ G ++ A +V+N + + V N++I G
Sbjct: 205 KQVHAMVVVTGRDL-VVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIR 263
Query: 306 NGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVL 365
N ++ E+F + R + P+ + + L CS L GK IH A+R F+ L
Sbjct: 264 NRNYKEAFLLMSRQR-----PNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKL 318
Query: 366 ETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFH--CLRNQ 423
L+DMYGKCGQ+ A +F I K++VSW ++I AY NG +ALE+F C
Sbjct: 319 CNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGS 378
Query: 424 TLKPDAVTIASILPAYAELATVSECKQIHAYI-TKLELSSNTFTSNAIVYMYAKCGDLQT 482
+ P++VT ++ A A V E K+ + K L T + + +K G+ +
Sbjct: 379 GVLPNSVTFLVVISACAHAGLVKEGKECFGMMKEKYRLVPGTEHYVCFIDILSKAGETEE 438
Query: 483 ARRYFDSM 490
R + M
Sbjct: 439 IWRLVERM 446
Score = 145 bits (366), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 110/417 (26%), Positives = 195/417 (46%), Gaps = 52/417 (12%)
Query: 25 GAPKRDLLVNPRIRKSNPTKKQMSETPKRG-----------------MIKPNSLSLTRSL 67
G P L + +I +++P + TP G MIK + + T S
Sbjct: 63 GNPNDTLALFLQIHRASPDLSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGTISK 122
Query: 68 CEFVDS----GAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIG 123
+D G + +++ +FE + + D WN ++ GF G +E + + M E +
Sbjct: 123 TALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVE 182
Query: 124 IDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVC-NSLIDMYFKFGFVEVAEK 182
I FT V+K C L +GK+VH ++ G RD+ V ++I Y G + A K
Sbjct: 183 ISEFTLSSVVKTCASLKILQQGKQVHAMVVVTG--RDLVVLGTAMISFYSSVGLINEAMK 240
Query: 183 VFEAMPLR-DLVSWNCMVNGYRVIGDGLKSLMC-----FKE--MLGLGEKPDRLSMISSL 234
V+ ++ + D V N +++G C +KE +L ++P+ + SSL
Sbjct: 241 VYNSLNVHTDEVMLNSLISG------------CIRNRNYKEAFLLMSRQRPNVRVLSSSL 288
Query: 235 GGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIV 294
GCS + GK+IHC +RNG D + L+DMY KCG++ A +F + K++V
Sbjct: 289 AGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVV 348
Query: 295 AWNAMIGGYAINGHFLESFTCLKRMQED--NLIPDAITMINLLPSCSKFGTLLEGKCIHG 352
+W +MI YA+NG +++ + M E+ ++P+++T + ++ +C+ G + EGK G
Sbjct: 349 SWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFG 408
Query: 353 YAIRK-MFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVS-----WNAIIAA 403
K +P +D+ K G+ + + R+ E + S W A+++A
Sbjct: 409 MMKEKYRLVPGTEHYVCFIDILSKAGETEEIWRLVERMMENDNQSIPCAIWVAVLSA 465
>AT2G36730.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15405068-15406573 REVERSE
Length = 501
Score = 233 bits (594), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 140/459 (30%), Positives = 240/459 (52%), Gaps = 8/459 (1%)
Query: 248 EIHCQVIRNGLELDIMVQTSLIDMYAKCGKVD--YAERVFNEMTCKNIVAWNAMIGGYAI 305
+IH Q+ + L+ D + + L+ + + D +A + + WN + GY+
Sbjct: 31 QIHGQIHLSSLQNDSFIISELVRVSSLSLAKDLAFARTLLLHSSDSTPSTWNMLSRGYSS 90
Query: 306 NGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVL 365
+ +ES M+ + P+ +T LL +C+ F L G+ I ++ F + +
Sbjct: 91 SDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEVLKHGFDFDVYV 150
Query: 366 ETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTL 425
L+ +YG C + A VF + E+N+VSWN+I+ A V+NG+ E F + +
Sbjct: 151 GNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEMIGKRF 210
Query: 426 KPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARR 485
PD T+ +L A +S K +H+ + EL N A+V MYAK G L+ AR
Sbjct: 211 CPDETTMVVLLSACG--GNLSLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLEYARL 268
Query: 486 YFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRM-KQNGIEPNESTFVSLLSSCSISG 544
F+ M KN+ +W+ MI+ A +GF ++QLFS+M K++ + PN TF+ +L +CS +G
Sbjct: 269 VFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCACSHTG 328
Query: 545 LVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSL 604
LV++G++ F+ M+ + I + HYG MVD+LGR G L+ A FI++MP P A +W +L
Sbjct: 329 LVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAVVWRTL 388
Query: 605 LTA---SRNNNDIFFAEFAAKHILSHDNDNTGCYVLLANMYAEAGRWEDVEQIKLVMKKK 661
L+A + +D E K ++ + +G V++AN +AEA W + +++ VMK+
Sbjct: 389 LSACSIHHDEDDEGIGEKVKKRLIELEPKRSGNLVIVANRFAEARMWAEAAEVRRVMKET 448
Query: 662 GLAKTVDCCTVESKGKSQKFINNNKSHQQAYMIYDVLDI 700
+ K +E G +F + + IY++LD+
Sbjct: 449 KMKKIAGESCLELGGSFHRFFSGYDPRSEYVSIYELLDL 487
Score = 178 bits (451), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 118/354 (33%), Positives = 188/354 (53%), Gaps = 18/354 (5%)
Query: 55 MIKPNSLSLTRSLCEFVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFY 114
+++ +SLSL + L A L L + P T WN++ RG+S+ E I Y
Sbjct: 51 LVRVSSLSLAKDL-------AFARTLLLHSSDSTPST--WNMLSRGYSSSDSPVESIWVY 101
Query: 115 HRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKF 174
M+ GI + TFPF++KAC L G+++ +++K G D D+YV N+LI +Y
Sbjct: 102 SEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEVLKHGFDFDVYVGNNLIHLYGTC 161
Query: 175 GFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLM--CFKEMLGLGEKPDRLSMIS 232
A KVF+ M R++VSWN ++ ++ +G +L+ CF EM+G PD +M+
Sbjct: 162 KKTSDARKVFDEMTERNVVSWNSIMTA--LVENGKLNLVFECFCEMIGKRFCPDETTMVV 219
Query: 233 SLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKN 292
L C G + GK +H QV+ LEL+ + T+L+DMYAK G ++YA VF M KN
Sbjct: 220 LLSAC--GGNLSLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLEYARLVFERMVDKN 277
Query: 293 IVAWNAMIGGYAINGHFLESFTCL-KRMQEDNLIPDAITMINLLPSCSKFGTLLEG-KCI 350
+ W+AMI G A G E+ K M+E ++ P+ +T + +L +CS G + +G K
Sbjct: 278 VWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCACSHTGLVDDGYKYF 337
Query: 351 HGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRIN-EKNMVSWNAIIAA 403
H P ++ A+VD+ G+ G+L A ++ E + V W +++A
Sbjct: 338 HEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAVVWRTLLSA 391
Score = 168 bits (425), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 99/318 (31%), Positives = 166/318 (52%), Gaps = 5/318 (1%)
Query: 194 SWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQV 253
+WN + GY ++S+ + EM G KP++L+ L C+ + G++I +V
Sbjct: 80 TWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEV 139
Query: 254 IRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESF 313
+++G + D+ V +LI +Y C K A +VF+EMT +N+V+WN+++ NG F
Sbjct: 140 LKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVF 199
Query: 314 TCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMY 373
C M PD TM+ LL +C G L GK +H + + + L TALVDMY
Sbjct: 200 ECFCEMIGKRFCPDETTMVVLLSACG--GNLSLGKLVHSQVMVRELELNCRLGTALVDMY 257
Query: 374 GKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELF-HCLRNQTLKPDAVTI 432
K G L++A VF R+ +KN+ +W+A+I Q G EEAL+LF ++ +++P+ VT
Sbjct: 258 AKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTF 317
Query: 433 ASILPAYAELATVSECKQIHAYITKL-ELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMS 491
+L A + V + + + K+ ++ A+V + + G L A + M
Sbjct: 318 LGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMP 377
Query: 492 FK-NLVSWNTMIMAYAIH 508
F+ + V W T++ A +IH
Sbjct: 378 FEPDAVVWRTLLSACSIH 395
>AT1G33350.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:12090071-12091687 REVERSE
Length = 538
Score = 230 bits (587), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 121/341 (35%), Positives = 202/341 (59%), Gaps = 4/341 (1%)
Query: 367 TALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQ-TL 425
TA++ Y + G + A +F + E+++ SWNAI+AA QNG EA+ LF + N+ ++
Sbjct: 197 TAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSI 256
Query: 426 KPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARR 485
+P+ VT+ +L A A+ T+ K IHA+ + +LSS+ F SN++V +Y KCG+L+ A
Sbjct: 257 RPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASS 316
Query: 486 YFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQ---NGIEPNESTFVSLLSSCSI 542
F S K+L +WN+MI +A+HG +I +F M + N I+P+ TF+ LL++C+
Sbjct: 317 VFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTH 376
Query: 543 SGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWG 602
GLV++G F+ M + I+ IEHYGC++DLLGR G D A + + M + IWG
Sbjct: 377 GGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWG 436
Query: 603 SLLTASRNNNDIFFAEFAAKHILSHDNDNTGCYVLLANMYAEAGRWEDVEQIKLVMKKKG 662
SLL A + + + AE A K++++ + +N G ++AN+Y E G WE+ + + ++K +
Sbjct: 437 SLLNACKIHGHLDLAEVAVKNLVALNPNNGGYVAMMANLYGEMGNWEEARRARKMIKHQN 496
Query: 663 LAKTVDCCTVESKGKSQKFINNNKSHQQAYMIYDVLDIILK 703
K +E + +F + +KSH + IY +LD ++
Sbjct: 497 AYKPPGWSRIEIDNEVHQFYSLDKSHPETEEIYMILDSLIS 537
Score = 130 bits (327), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 161/329 (48%), Gaps = 40/329 (12%)
Query: 249 IHCQVIRNGLELDIMVQTSLIDMYAK-CGKVDYAERVFNEMTCKNIVAWNAMIGGYA--- 304
+H + ++G L ++VQT+L+ YA + A ++F+EM+ +N+V+W AM+ GYA
Sbjct: 148 VHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSG 207
Query: 305 ----------------------------INGHFLESFTCLKRM-QEDNLIPDAITMINLL 335
NG FLE+ + +RM E ++ P+ +T++ +L
Sbjct: 208 DISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVL 267
Query: 336 PSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMV 395
+C++ GTL K IH +A R+ + + +LVD+YGKCG L+ A VF ++K++
Sbjct: 268 SACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLT 327
Query: 396 SWNAIIAAYVQNGRNEEALELFH---CLRNQTLKPDAVTIASILPAYAELATVSECKQIH 452
+WN++I + +GR+EEA+ +F L +KPD +T +L A VS+ +
Sbjct: 328 AWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYF 387
Query: 453 AYIT-KLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFK-NLVSWNTMIMAYAIHGF 510
+T + + ++ + + G A +M K + W +++ A IHG
Sbjct: 388 DLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNACKIHGH 447
Query: 511 GTISIQLFSRMKQNGIEPNESTFVSLLSS 539
+ + + + PN +V+++++
Sbjct: 448 --LDLAEVAVKNLVALNPNNGGYVAMMAN 474
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 127/261 (48%), Gaps = 6/261 (2%)
Query: 55 MIKPNSLSLTRSLCEFVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFY 114
M + N +S T L + SG + NA+ LFE M + D WN I+ + GLF E + +
Sbjct: 188 MSERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLF 247
Query: 115 HRMEYE-GIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFK 173
RM E I + T V+ AC + + K +H + L D++V NSL+D+Y K
Sbjct: 248 RRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGK 307
Query: 174 FGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLG---EKPDRLSM 230
G +E A VF+ + L +WN M+N + + G +++ F+EM+ L KPD ++
Sbjct: 308 CGNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITF 367
Query: 231 ISSLGGCSIGCCVRGGK-EIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMT 289
I L C+ G V G+ R G+E I LID+ + G+ D A V + M
Sbjct: 368 IGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMK 427
Query: 290 CKNIVA-WNAMIGGYAINGHF 309
K A W +++ I+GH
Sbjct: 428 MKADEAIWGSLLNACKIHGHL 448
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 87/366 (23%), Positives = 166/366 (45%), Gaps = 41/366 (11%)
Query: 79 ALYLFEKMNQPDTYIWNVIIRGFSNKGLFQ--EVIDFYHRMEYEGIGIDN-FTFPFVIKA 135
A ++F++ + P+T+++ ++ +S+ F+ M + N F +P V+K+
Sbjct: 76 ARFIFDRFSFPNTHLYAAVLTAYSSSLPLHASSAFSFFRLMVNRSVPRPNHFIYPLVLKS 135
Query: 136 CGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFK-FGFVEVAEKVFEAMPLRDLVS 194
L S VH L K G + V +L+ Y + +A ++F+ M R++VS
Sbjct: 136 TPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVS 195
Query: 195 WNCMVNGYRVIGD-------------------------------GLKSLMCFKEMLGLGE 223
W M++GY GD L+++ F+ M+
Sbjct: 196 WTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPS 255
Query: 224 -KPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAE 282
+P+ ++++ L C+ ++ K IH R L D+ V SL+D+Y KCG ++ A
Sbjct: 256 IRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEAS 315
Query: 283 RVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQE---DNLIPDAITMINLLPSCS 339
VF + K++ AWN+MI +A++G E+ + M + +++ PD IT I LL +C+
Sbjct: 316 SVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACT 375
Query: 340 KFGTLLEGKCIHGYAIRKMFL-PHLVLETALVDMYGKCGQLKFAECVFGRINEK-NMVSW 397
G + +G+ + + P + L+D+ G+ G+ A V + K + W
Sbjct: 376 HGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIW 435
Query: 398 NAIIAA 403
+++ A
Sbjct: 436 GSLLNA 441
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 113/265 (42%), Gaps = 42/265 (15%)
Query: 379 LKFAECVFGRINEKNMVSWNAIIAAYVQNG--RNEEALELFHCLRNQTL-KPDAVTIASI 435
L +A +F R + N + A++ AY + A F + N+++ +P+ +
Sbjct: 73 LSYARFIFDRFSFPNTHLYAAVLTAYSSSLPLHASSAFSFFRLMVNRSVPRPNHFIYPLV 132
Query: 436 LPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAK-CGDLQTARRYFDSMSFKN 494
L + L++ +H ++ K A+++ YA + AR+ FD MS +N
Sbjct: 133 LKSTPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERN 192
Query: 495 LVSWNTMIMAYAIHGFGTISIQLFSRMK---------------QNG-------------- 525
+VSW M+ YA G + ++ LF M QNG
Sbjct: 193 VVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMIN 252
Query: 526 ---IEPNESTFVSLLSSCSISGLVN--EGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTG 580
I PNE T V +LS+C+ +G + +G F + + D + D + +VDL G+ G
Sbjct: 253 EPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAF-AYRRDLSSDVFVS--NSLVDLYGKCG 309
Query: 581 NLDAAKQFIEEMPLVPTARIWGSLL 605
NL+ A + +M + W S++
Sbjct: 310 NLEEASS-VFKMASKKSLTAWNSMI 333
>AT2G37320.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15667223-15668725 FORWARD
Length = 500
Score = 228 bits (580), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 125/356 (35%), Positives = 198/356 (55%), Gaps = 2/356 (0%)
Query: 319 MQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQ 378
++ D DA + + + SC G H A++ F+ + L ++LV +Y G+
Sbjct: 111 VKRDGWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGE 170
Query: 379 LKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPA 438
++ A VF + E+N+VSW A+I+ + Q R + L+L+ +R T P+ T ++L A
Sbjct: 171 VENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSA 230
Query: 439 YAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSW 498
+ + + +H + L S SN+++ MY KCGDL+ A R FD S K++VSW
Sbjct: 231 CTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSW 290
Query: 499 NTMIMAYAIHGFGTISIQLFS-RMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMK 557
N+MI YA HG +I+LF M ++G +P+ T++ +LSSC +GLV EG + FN M
Sbjct: 291 NSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMA 350
Query: 558 MDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTASRNNNDIFFA 617
++ + + HY C+VDLLGR G L A + IE MP+ P + IWGSLL + R + D++
Sbjct: 351 -EHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDVWTG 409
Query: 618 EFAAKHILSHDNDNTGCYVLLANMYAEAGRWEDVEQIKLVMKKKGLAKTVDCCTVE 673
AA+ L + D +V LAN+YA G W++ ++ +MK KGL C +E
Sbjct: 410 IRAAEERLMLEPDCAATHVQLANLYASVGYWKEAATVRKLMKDKGLKTNPGCSWIE 465
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 105/378 (27%), Positives = 178/378 (47%), Gaps = 11/378 (2%)
Query: 106 LFQEVI--DFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYV 163
+ +EV+ D ++ +G D + +++CG F G H +K G D+Y+
Sbjct: 98 VLEEVMLEDSSSSVKRDGWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYL 157
Query: 164 CNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGE 223
+SL+ +Y G VE A KVFE MP R++VSW M++G+ L + +M
Sbjct: 158 GSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTS 217
Query: 224 KPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAER 283
P+ + + L C+ + G+ +HCQ + GL+ + + SLI MY KCG + A R
Sbjct: 218 DPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFR 277
Query: 284 VFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLK-RMQEDNLIPDAITMINLLPSCSKFG 342
+F++ + K++V+WN+MI GYA +G +++ + M + PDAIT + +L SC G
Sbjct: 278 IFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAG 337
Query: 343 TLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFA-ECVFGRINEKNMVSWNAII 401
+ EG+ P L + LVD+ G+ G L+ A E + + N V W +++
Sbjct: 338 LVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLL 397
Query: 402 AAYVQNGRNEEALELFHCLRNQTLKPD-AVTIASILPAYAELATVSECKQIHAYITKLEL 460
+ +G + L+PD A T + YA + E + + L
Sbjct: 398 FSCRVHGDVWTGIRAAE--ERLMLEPDCAATHVQLANLYASVGYWKEAATVRKLMKDKGL 455
Query: 461 SSNTFTS----NAIVYMY 474
+N S N V+M+
Sbjct: 456 KTNPGCSWIEINNYVFMF 473
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 147/290 (50%), Gaps = 2/290 (0%)
Query: 222 GEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYA 281
G D + S++ C + R G HC ++ G D+ + +SL+ +Y G+V+ A
Sbjct: 115 GWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENA 174
Query: 282 ERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKF 341
+VF EM +N+V+W AMI G+A +M++ P+ T LL +C+
Sbjct: 175 YKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGS 234
Query: 342 GTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAII 401
G L +G+ +H + +L + +L+ MY KCG LK A +F + + K++VSWN++I
Sbjct: 235 GALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMI 294
Query: 402 AAYVQNGRNEEALELFHCLRNQT-LKPDAVTIASILPAYAELATVSECKQIHAYITKLEL 460
A Y Q+G +A+ELF + ++ KPDA+T +L + V E ++ + + L
Sbjct: 295 AGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGL 354
Query: 461 SSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFK-NLVSWNTMIMAYAIHG 509
+ +V + + G LQ A ++M K N V W +++ + +HG
Sbjct: 355 KPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHG 404
Score = 112 bits (281), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 141/269 (52%), Gaps = 7/269 (2%)
Query: 70 FVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTF 129
+ DSG ++NA +FE+M + + W +I GF+ + + Y +M +++TF
Sbjct: 165 YRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTF 224
Query: 130 PFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPL 189
++ AC + +G+ VH + + +GL +++ NSLI MY K G ++ A ++F+
Sbjct: 225 TALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSN 284
Query: 190 RDLVSWNCMVNGYRVIGDGLKSLMCFKEML-GLGEKPDRLSMISSLGGCSIGCCVRGGKE 248
+D+VSWN M+ GY G ++++ F+ M+ G KPD ++ + L C V+ G++
Sbjct: 285 KDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRK 344
Query: 249 IHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCK-NIVAWNAMIGGYAING 307
+ +GL+ ++ + L+D+ + G + A + M K N V W +++ ++G
Sbjct: 345 FFNLMAEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHG 404
Query: 308 HFLESFTCLKRMQEDNLI-PD-AITMINL 334
+ +T ++ +E ++ PD A T + L
Sbjct: 405 ---DVWTGIRAAEERLMLEPDCAATHVQL 430
>AT1G14470.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:4954080-4955702 FORWARD
Length = 540
Score = 227 bits (578), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 153/528 (28%), Positives = 255/528 (48%), Gaps = 83/528 (15%)
Query: 82 LFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLS 141
+F+ + P+ ++ N + + FS + +V+ Y + GI D F+FP VIK+ GR
Sbjct: 62 IFDSVTFPNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAGRF-- 119
Query: 142 FIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNG 201
G + K+G +D YV N ++DMY K VE A KVF+ + R WN M++G
Sbjct: 120 ---GILFQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISG 176
Query: 202 YRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELD 261
Y G+ KE C++ E D
Sbjct: 177 YWKWGN---------------------------------------KEEACKLFDMMPEND 197
Query: 262 IMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQE 321
++ T +I +AK ++ A + F+ M K++V+WNAM+ GYA NG ++ M
Sbjct: 198 VVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLR 257
Query: 322 DNLIPDAITMINLLPSCS--------------------------KFGTL-LEGKCIHGYA 354
+ P+ T + ++ +CS K L + KC +
Sbjct: 258 LGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQS 317
Query: 355 IRKMF-----LPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGR 409
R++F +LV A++ Y + G + A +F + ++N+VSWN++IA Y NG+
Sbjct: 318 ARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQ 377
Query: 410 NEEALELFHCLRNQ-TLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSN 468
A+E F + + KPD VT+ S+L A +A + I YI K ++ N
Sbjct: 378 AALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYR 437
Query: 469 AIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEP 528
++++MYA+ G+L A+R FD M +++VS+NT+ A+A +G G ++ L S+MK GIEP
Sbjct: 438 SLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEP 497
Query: 529 NESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLL 576
+ T+ S+L++C+ +GL+ EG +F S++ + +HY CM DLL
Sbjct: 498 DRVTYTSVLTACNRAGLLKEGQRIFKSIR-----NPLADHYACM-DLL 539
Score = 144 bits (364), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/341 (26%), Positives = 171/341 (50%), Gaps = 34/341 (9%)
Query: 55 MIKPNSLSLTRSLCEFVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFY 114
M + + +S T + F ++NA F++M + WN ++ G++ G ++ + +
Sbjct: 193 MPENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLF 252
Query: 115 HRMEYEGIGIDNFTFPFVIKACG---------RLLSFIEGKKV-------------HGK- 151
+ M G+ + T+ VI AC L+ I+ K+V H K
Sbjct: 253 NDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKC 312
Query: 152 ---------LIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGY 202
++G R++ N++I Y + G + A ++F+ MP R++VSWN ++ GY
Sbjct: 313 RDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGY 372
Query: 203 RVIGDGLKSLMCFKEMLGLGE-KPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELD 261
G ++ F++M+ G+ KPD ++MIS L C + G I + +N ++L+
Sbjct: 373 AHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLN 432
Query: 262 IMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQE 321
SLI MYA+ G + A+RVF+EM +++V++N + +A NG +E+ L +M++
Sbjct: 433 DSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKD 492
Query: 322 DNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPH 362
+ + PD +T ++L +C++ G L EG+ I +IR H
Sbjct: 493 EGIEPDRVTYTSVLTACNRAGLLKEGQRIFK-SIRNPLADH 532
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 123/512 (24%), Positives = 216/512 (42%), Gaps = 87/512 (16%)
Query: 140 LSFIEGKKVHGKLIKI-GLDRDIYVCNSLIDMYFKFGFVEVAEK-VFEAMPLRDLVSWNC 197
L+F + ++H +LI L R Y + +I + + +F+++ ++ N
Sbjct: 17 LTFPQLNQIHAQLIVFNSLPRQSYWASRIISCCTRLRAPSYYTRLIFDSVTFPNVFVVNS 76
Query: 198 MVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLS---MISSLGGCSIGCCVRGGKEIHCQVI 254
M + + L +++ G PD S +I S G R G V
Sbjct: 77 MFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAG--------RFGILFQALVE 128
Query: 255 RNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFT 314
+ G D V+ ++DMY K V+ A +VF++++ + WN MI GY G+ E+
Sbjct: 129 KLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACK 188
Query: 315 CLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYG 374
M E++++ T ++ +
Sbjct: 189 LFDMMPENDVVS---------------------------------------WTVMITGFA 209
Query: 375 KCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIAS 434
K L+ A F R+ EK++VSWNA+++ Y QNG E+AL LF+ + ++P+ T
Sbjct: 210 KVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVI 269
Query: 435 ILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARR--------- 485
++ A + A S + + I + + N F A++ M+AKC D+Q+ARR
Sbjct: 270 VISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQR 329
Query: 486 -----------------------YFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMK 522
FD+M +N+VSWN++I YA +G ++I+ F M
Sbjct: 330 NLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMI 389
Query: 523 QNG-IEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGN 581
G +P+E T +S+LS+C + G + + ++ + I Y ++ + R GN
Sbjct: 390 DYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKN-QIKLNDSGYRSLIFMYARGGN 448
Query: 582 LDAAKQFIEEMPLVPTARIWGSLLTASRNNND 613
L AK+ +EM + +L TA N D
Sbjct: 449 LWEAKRVFDEMKERDVVS-YNTLFTAFAANGD 479
>AT1G03510.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:876258-877547 REVERSE
Length = 429
Score = 222 bits (566), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 119/409 (29%), Positives = 213/409 (52%), Gaps = 34/409 (8%)
Query: 289 TCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIP-DAITMINLLPSCSKFGTLLEG 347
+C +++ + YA G+ ++ +M +P DA L SC+ + G
Sbjct: 8 SCTKLISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLG 67
Query: 348 KCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQN 407
+H ++++ FL + + AL+DMYGKC + A +F I ++N V WNA+I+ Y
Sbjct: 68 GSVHAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHC 127
Query: 408 GRNEEALELFHCL---RNQT------------------------------LKPDAVTIAS 434
G+ +EA+EL+ + N++ KP+ +T+ +
Sbjct: 128 GKVKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLA 187
Query: 435 ILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKN 494
++ A + + K+IH+Y + + + + +V Y +CG + + FDSM ++
Sbjct: 188 LVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRD 247
Query: 495 LVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFN 554
+V+W+++I AYA+HG +++ F M+ + P++ F+++L +CS +GL +E F
Sbjct: 248 VVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFK 307
Query: 555 SMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTASRNNNDI 614
M+ DY + +HY C+VD+L R G + A + I+ MP PTA+ WG+LL A RN +I
Sbjct: 308 RMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEI 367
Query: 615 FFAEFAAKHILSHDNDNTGCYVLLANMYAEAGRWEDVEQIKLVMKKKGL 663
AE AA+ +L + +N YVLL +Y GR E+ E+++L MK+ G+
Sbjct: 368 ELAEIAARELLMVEPENPANYVLLGKIYMSVGRQEEAERLRLKMKESGV 416
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/356 (24%), Positives = 165/356 (46%), Gaps = 44/356 (12%)
Query: 98 IRGFSNKGLFQEVIDFYHRMEYE-GIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIG 156
+ ++N+G ++ ++ + +M + +D F +K+C + G VH +K
Sbjct: 19 LSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVHAHSVKSN 78
Query: 157 LDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIG---------- 206
+ +V +L+DMY K V A K+F+ +P R+ V WN M++ Y G
Sbjct: 79 FLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYE 138
Query: 207 ----------------------DG-LKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCV 243
DG +++ +++M+ KP+ +++++ + CS
Sbjct: 139 AMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIGAF 198
Query: 244 RGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGY 303
R KEIH RN +E +++ L++ Y +CG + Y + VF+ M +++VAW+++I Y
Sbjct: 199 RLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAY 258
Query: 304 AINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFG----TLLEGKCIHG-YAIRKM 358
A++G + + M+ + PD I +N+L +CS G L+ K + G Y +R
Sbjct: 259 ALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRMQGDYGLRAS 318
Query: 359 FLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMV-SWNAIIAAYVQNGRNEEA 413
+ + LVD+ + G+ + A V + EK +W A++ A G E A
Sbjct: 319 KDHY----SCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEIELA 370
Score = 122 bits (307), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 93/385 (24%), Positives = 173/385 (44%), Gaps = 45/385 (11%)
Query: 192 LVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMIS-SLGGCSIGCCVRGGKEIH 250
L+S ++ Y G+ ++L F +M P + S +L C+ G +H
Sbjct: 12 LISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVH 71
Query: 251 CQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFL 310
+++ + V +L+DMY KC V +A ++F+E+ +N V WNAMI Y G
Sbjct: 72 AHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVK 131
Query: 311 E---------------SFTCL------------------KRMQEDNLIPDAITMINLLPS 337
E SF + ++M E P+ IT++ L+ +
Sbjct: 132 EAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSA 191
Query: 338 CSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSW 397
CS G K IH YA R + PH L++ LV+ YG+CG + + + VF + ++++V+W
Sbjct: 192 CSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAW 251
Query: 398 NAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITK 457
+++I+AY +G E AL+ F + + PD + ++L A + E Y +
Sbjct: 252 SSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEAL---VYFKR 308
Query: 458 LE----LSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLV-SWNTMIMAYAIHGFGT 512
++ L ++ + +V + ++ G + A + +M K +W ++ A +G
Sbjct: 309 MQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLG--ACRNYGE 366
Query: 513 ISIQLFSRMKQNGIEP-NESTFVSL 536
I + + + +EP N + +V L
Sbjct: 367 IELAEIAARELLMVEPENPANYVLL 391
>AT4G16470.1 | Symbols: | INVOLVED IN: biological_process unknown;
LOCATED IN: cellular_component unknown; EXPRESSED IN: 14
plant structures; EXPRESSED DURING: 4 anthesis, C
globular stage, petal differentiation and expansion
stage, D bilateral stage, E expanded cotyledon stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: CRR22 (CHLORORESPIRATORY REDUCTION22);
endonuclease (TAIR:AT1G11290.1); Has 12729 Blast hits to
4676 proteins in 132 species: Archae - 0; Bacteria - 0;
Metazoa - 31; Fungi - 25; Plants - 12474; Viruses - 0;
Other Eukaryotes - 199 (source: NCBI BLink). |
chr4:9287862-9289541 REVERSE
Length = 485
Score = 219 bits (558), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 120/366 (32%), Positives = 188/366 (51%), Gaps = 16/366 (4%)
Query: 330 TMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRI 389
T LL C + +GK IH F + L+ L+ +Y
Sbjct: 110 TYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYAL-------------- 155
Query: 390 NEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECK 449
+++ WNA+I+ YVQ G +E L +++ +R + PD T AS+ A + L + K
Sbjct: 156 --SDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGK 213
Query: 450 QIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHG 509
+ HA + K + SN +A+V MY KC R FD +S +N+++W ++I Y HG
Sbjct: 214 RAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHG 273
Query: 510 FGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHY 569
+ ++ F +MK+ G PN TF+ +L++C+ GLV++GWE F SMK DY I+ +HY
Sbjct: 274 KVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDYGIEPEGQHY 333
Query: 570 GCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTASRNNNDIFFAEFAAKHILSHDN 629
MVD LGR G L A +F+ + P +WGSLL A R + ++ E AA L D
Sbjct: 334 AAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHGNVKLLELAATKFLELDP 393
Query: 630 DNTGCYVLLANMYAEAGRWEDVEQIKLVMKKKGLAKTVDCCTVESKGKSQKFINNNKSHQ 689
N G YV+ AN YA G E +++ M+ G+ K +E +G+ +F+ ++ SH+
Sbjct: 394 TNGGNYVVFANGYASCGLREAASKVRRKMENAGVKKDPGYSQIELQGEVHRFMKDDTSHR 453
Query: 690 QAYMIY 695
+ IY
Sbjct: 454 LSEKIY 459
Score = 129 bits (325), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 166/337 (49%), Gaps = 24/337 (7%)
Query: 83 FEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLSF 142
F+ NQ T + ++G G +E + + G+ ++ T+ +++ C + +
Sbjct: 68 FQVENQRKTEKLDKTLKGLCVTGRLKEAVGL---LWSSGLQVEPETYAVLLQECKQRKEY 124
Query: 143 IEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGY 202
+GK++H ++ +G + Y+ L+ +Y L DL+ WN M++GY
Sbjct: 125 TKGKRIHAQMFVVGFALNEYLKVKLLILY----------------ALSDLIPWNAMISGY 168
Query: 203 RVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDI 262
G + L + +M PD+ + S CS + GK H +I+ ++ +I
Sbjct: 169 VQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNI 228
Query: 263 MVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQED 322
+V ++L+DMY KC RVF++++ +N++ W ++I GY +G E C ++M+E+
Sbjct: 229 IVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEE 288
Query: 323 NLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMF--LPHLVLETALVDMYGKCGQLK 380
P+ +T + +L +C+ G L++ H Y++++ + P A+VD G+ G+L+
Sbjct: 289 GCRPNPVTFLVVLTACNH-GGLVDKGWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQ 347
Query: 381 FA-ECVFGRINEKNMVSWNAIIAAYVQNGRNEEALEL 416
A E V +++ W +++ A +G N + LEL
Sbjct: 348 EAYEFVMKSPCKEHPPVWGSLLGACRIHG-NVKLLEL 383
Score = 106 bits (264), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 125/267 (46%), Gaps = 20/267 (7%)
Query: 246 GKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAI 305
GK IH Q+ G L+ ++ L+ +YA +++ WNAMI GY
Sbjct: 127 GKRIHAQMFVVGFALNEYLKVKLLILYA----------------LSDLIPWNAMISGYVQ 170
Query: 306 NGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVL 365
G E M+++ ++PD T ++ +CS L GK H I++ ++++
Sbjct: 171 KGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIV 230
Query: 366 ETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTL 425
++ALVDMY KC VF +++ +N+++W ++I+ Y +G+ E L+ F ++ +
Sbjct: 231 DSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGC 290
Query: 426 KPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSN--AIVYMYAKCGDLQTA 483
+P+ VT +L A V + + H Y K + + A+V + G LQ A
Sbjct: 291 RPNPVTFLVVLTACNHGGLVDKGWE-HFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEA 349
Query: 484 RRY-FDSMSFKNLVSWNTMIMAYAIHG 509
+ S ++ W +++ A IHG
Sbjct: 350 YEFVMKSPCKEHPPVWGSLLGACRIHG 376
>AT3G28660.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:10739400-10740914 REVERSE
Length = 504
Score = 213 bits (543), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 127/473 (26%), Positives = 245/473 (51%), Gaps = 14/473 (2%)
Query: 243 VRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVD----YAERVFNEMTCKNIVAWNA 298
V+ K H I +GL + + L+ + ++ YA +F+ + N ++
Sbjct: 24 VKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFVYDT 83
Query: 299 MIG--GYAINGHF-LESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAI 355
MI + H L F + + +E+++ P +T L+ +C K GK IH + +
Sbjct: 84 MIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLKACFFSVGKQIHCWVV 143
Query: 356 RK-MFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEAL 414
+ +FL ++T ++ +Y + L A VF I + ++V W+ ++ YV+ G E L
Sbjct: 144 KNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGL 203
Query: 415 ELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLE-LSSNTFTSNAIVYM 473
E+F + + ++PD ++ + L A A++ +++ K IH ++ K + S+ F A+V M
Sbjct: 204 EVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDM 263
Query: 474 YAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRM-KQNGIEPNEST 532
YAKCG ++TA F+ ++ +N+ SW +I YA +G+ + R+ +++GI+P+
Sbjct: 264 YAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVV 323
Query: 533 FVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEM 592
+ +L++C+ G + EG + +M+ Y I EHY C+VDL+ R G LD A IE+M
Sbjct: 324 LLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKM 383
Query: 593 PLVPTARIWGSLLTASRNNNDIFFAEFAAKHILSHDNDNT----GCYVLLANMYAEAGRW 648
P+ P A +WG+LL R + ++ E A +++L + N V L+N+Y R
Sbjct: 384 PMKPLASVWGALLNGCRTHKNVELGELAVQNLLDLEKGNVEEEEAALVQLSNIYFSVQRN 443
Query: 649 EDVEQIKLVMKKKGLAKTVDCCTVESKGKSQKFINNNKSHQQAYMIYDVLDII 701
+ +++ +++++G+ KT +E G KF++ + SH I+ ++ ++
Sbjct: 444 PEAFKVRGMIEQRGIRKTPGWSLLEVDGIVTKFVSGDVSHPNLLQIHTLIHLL 496
Score = 164 bits (416), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 112/374 (29%), Positives = 201/374 (53%), Gaps = 15/374 (4%)
Query: 43 TKKQMSETPKRGMIK---PNSLSLTRSLCEFVDSGAMDNALY----LFEKMNQPDTYIWN 95
T KQ+ T +I N+ ++++ L F+ ++ + +F+ + P++++++
Sbjct: 23 TVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFVYD 82
Query: 96 VIIRGFSNKGLFQEVIDFYHRM---EYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKL 152
+IR S + ++ M E E I TF F+I AC + F GK++H +
Sbjct: 83 TMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLKACFFSVGKQIHCWV 142
Query: 153 IKIGL-DRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKS 211
+K G+ D +V ++ +Y + + A KVF+ +P D+V W+ ++NGY G G +
Sbjct: 143 VKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEG 202
Query: 212 LMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQV-IRNGLELDIMVQTSLID 270
L FKEML G +PD S+ ++L C+ + GK IH V + +E D+ V T+L+D
Sbjct: 203 LEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVD 262
Query: 271 MYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQ-EDNLIPDAI 329
MYAKCG ++ A VF ++T +N+ +W A+IGGYA G+ ++ TCL R++ ED + PD++
Sbjct: 263 MYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSV 322
Query: 330 TMINLLPSCSKFGTLLEGKC-IHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGR 388
++ +L +C+ G L EG+ + R P + +VD+ + G+L A + +
Sbjct: 323 VLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEK 382
Query: 389 INEKNMVS-WNAII 401
+ K + S W A++
Sbjct: 383 MPMKPLASVWGALL 396
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 128/255 (50%), Gaps = 4/255 (1%)
Query: 52 KRGMIKPNSLSLTRSLCEFVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVI 111
K G+ + T L +V+ + +A +F+++ QPD W+V++ G+ GL E +
Sbjct: 144 KNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGL 203
Query: 112 DFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKI-GLDRDIYVCNSLIDM 170
+ + M GI D F+ + AC ++ + +GK +H + K ++ D++V +L+DM
Sbjct: 204 EVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDM 263
Query: 171 YFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEM-LGLGEKPDRLS 229
Y K G +E A +VFE + R++ SW ++ GY G K+ C + G KPD +
Sbjct: 264 YAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVV 323
Query: 230 MISSLGGCSIGCCVRGGKE-IHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEM 288
++ L C+ G + G+ + R G+ + ++D+ + G++D A + +M
Sbjct: 324 LLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKM 383
Query: 289 TCKNIVA-WNAMIGG 302
K + + W A++ G
Sbjct: 384 PMKPLASVWGALLNG 398
>AT3G28640.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:10731518-10732723 REVERSE
Length = 401
Score = 213 bits (542), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 114/391 (29%), Positives = 214/391 (54%), Gaps = 7/391 (1%)
Query: 318 RMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRK-MFLPHLVLETALVDMYGKC 376
+ +E+++ P +T L+ +C K GK IH + ++ +FL ++T ++ +Y +
Sbjct: 3 KEEEEDIAPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVED 62
Query: 377 GQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASIL 436
L A VF I + ++V W+ ++ YV+ G E LE+F + + L+PD ++ + L
Sbjct: 63 KLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTAL 122
Query: 437 PAYAELATVSECKQIHAYITKLE-LSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNL 495
A A++ +++ K IH ++ K + S+ F A+V MYAKCG ++TA F ++ +N+
Sbjct: 123 TACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNV 182
Query: 496 VSWNTMIMAYAIHGFGTISIQLFSRM-KQNGIEPNESTFVSLLSSCSISGLVNEGWELFN 554
SW +I YA +G+ ++ R+ +++GI+P+ + +L++C+ G + EG +
Sbjct: 183 FSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLE 242
Query: 555 SMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTASRNNNDI 614
+M+ Y I EHY C+VDL+ R G LD A IE+MP+ P A +WG+LL R + ++
Sbjct: 243 NMEARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCRTHKNV 302
Query: 615 FFAEFAAKHILSHDNDNT----GCYVLLANMYAEAGRWEDVEQIKLVMKKKGLAKTVDCC 670
E A K++L + N V L+N+Y R + +++ +++++G+ KT
Sbjct: 303 ELGELAVKNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEASKVRGMIEQRGVRKTPGWS 362
Query: 671 TVESKGKSQKFINNNKSHQQAYMIYDVLDII 701
+E G KF++ + SH I+ V+ ++
Sbjct: 363 VLEVDGNVTKFVSGDVSHPNLLQIHTVIHLL 393
Score = 159 bits (402), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 97/291 (33%), Positives = 165/291 (56%), Gaps = 5/291 (1%)
Query: 116 RMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGL-DRDIYVCNSLIDMYFKF 174
+ E E I TF F+I AC + F GK++H ++K G+ D +V ++ +Y +
Sbjct: 3 KEEEEDIAPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVED 62
Query: 175 GFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSL 234
+ A KVF+ +P D+V W+ ++NGY G G + L F+EML G +PD S+ ++L
Sbjct: 63 KLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTAL 122
Query: 235 GGCSIGCCVRGGKEIHCQVIRNG-LELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNI 293
C+ + GK IH V + +E D+ V T+L+DMYAKCG ++ A VF ++T +N+
Sbjct: 123 TACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNV 182
Query: 294 VAWNAMIGGYAINGHFLESFTCLKRMQ-EDNLIPDAITMINLLPSCSKFGTLLEGKC-IH 351
+W A+IGGYA G+ ++ TCL+R++ ED + PD++ ++ +L +C+ G L EG+ +
Sbjct: 183 FSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLE 242
Query: 352 GYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVS-WNAII 401
R P + +VD+ + G+L A + ++ K + S W A++
Sbjct: 243 NMEARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALL 293
Score = 105 bits (263), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 131/255 (51%), Gaps = 4/255 (1%)
Query: 52 KRGMIKPNSLSLTRSLCEFVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVI 111
K G+ +S T L +V+ + +A +F+++ QPD W+V++ G+ GL E +
Sbjct: 41 KNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGL 100
Query: 112 DFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIG-LDRDIYVCNSLIDM 170
+ + M +G+ D F+ + AC ++ + +GK +H + K ++ D++V +L+DM
Sbjct: 101 EVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDM 160
Query: 171 YFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEM-LGLGEKPDRLS 229
Y K G +E A +VF+ + R++ SW ++ GY G K++ C + + G KPD +
Sbjct: 161 YAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVV 220
Query: 230 MISSLGGCSIGCCVRGGKE-IHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEM 288
++ L C+ G + G+ + R + + ++D+ + G++D A + +M
Sbjct: 221 LLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKM 280
Query: 289 TCKNIVA-WNAMIGG 302
K + + W A++ G
Sbjct: 281 PMKPLASVWGALLNG 295
>AT4G14170.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:8176709-8178085 REVERSE
Length = 458
Score = 211 bits (537), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 122/414 (29%), Positives = 217/414 (52%), Gaps = 3/414 (0%)
Query: 261 DIMVQTSLIDMYAKCGKV-DYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRM 319
++++ + L+ Y+K + + VF M +NI +WN +IG ++ +G +S RM
Sbjct: 46 NVVLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRM 105
Query: 320 QEDNLI-PDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQ 378
++ + PD T+ +L +CS G IH ++ F L + +ALV MY G+
Sbjct: 106 WRESCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGK 165
Query: 379 LKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPA 438
L A +F + ++ V + A+ YVQ G L +F + D+V + S+L A
Sbjct: 166 LLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMA 225
Query: 439 YAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSW 498
+L + K +H + + NAI MY KC L A F +MS ++++SW
Sbjct: 226 CGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISW 285
Query: 499 NTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKM 558
+++I+ Y + G +S +LF M + GIEPN TF+ +LS+C+ GLV + W F M+
Sbjct: 286 SSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLVEKSWLYFRLMQ- 344
Query: 559 DYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTASRNNNDIFFAE 618
+YNI ++HY + D + R G L+ A++F+E+MP+ P + G++L+ + ++ E
Sbjct: 345 EYNIVPELKHYASVADCMSRAGLLEEAEKFLEDMPVKPDEAVMGAVLSGCKVYGNVEVGE 404
Query: 619 FAAKHILSHDNDNTGCYVLLANMYAEAGRWEDVEQIKLVMKKKGLAKTVDCCTV 672
A+ ++ YV LA +Y+ AGR+++ E ++ MK+K ++K C ++
Sbjct: 405 RVARELIQLKPRKASYYVTLAGLYSAAGRFDEAESLRQWMKEKQISKVPGCSSI 458
Score = 159 bits (402), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 92/308 (29%), Positives = 162/308 (52%), Gaps = 3/308 (0%)
Query: 78 NALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEG-IGIDNFTFPFVIKAC 136
+L +F M + + WN+II FS G + ID + RM E + D+FT P +++AC
Sbjct: 66 TSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRAC 125
Query: 137 GRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWN 196
G +H +K+G ++V ++L+ MY G + A K+F+ MP+RD V +
Sbjct: 126 SASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSVLYT 185
Query: 197 CMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRN 256
M GY G+ + L F+EM G D + M+S L C ++ GK +H IR
Sbjct: 186 AMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRR 245
Query: 257 GLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCL 316
L + + ++ DMY KC +DYA VF M+ +++++W+++I GY ++G + SF
Sbjct: 246 CSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLF 305
Query: 317 KRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKM-FLPHLVLETALVDMYGK 375
M ++ + P+A+T + +L +C+ G L+E ++ +++ +P L ++ D +
Sbjct: 306 DEMLKEGIEPNAVTFLGVLSACAH-GGLVEKSWLYFRLMQEYNIVPELKHYASVADCMSR 364
Query: 376 CGQLKFAE 383
G L+ AE
Sbjct: 365 AGLLEEAE 372
Score = 145 bits (367), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 96/380 (25%), Positives = 180/380 (47%), Gaps = 9/380 (2%)
Query: 183 VFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLG-EKPDRLSMISSLGGCSIGC 241
VF MP R++ SWN ++ + G KS+ F M +PD ++ L CS
Sbjct: 70 VFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRACSASR 129
Query: 242 CVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIG 301
+ G IH ++ G + V ++L+ MY GK+ +A ++F++M ++ V + AM G
Sbjct: 130 EAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMFG 189
Query: 302 GYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLP 361
GY G + + M D++ M++LL +C + G L GK +HG+ IR+
Sbjct: 190 GYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCL 249
Query: 362 HLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLR 421
L L A+ DMY KC L +A VF ++ ++++SW+++I Y +G + +LF +
Sbjct: 250 GLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEML 309
Query: 422 NQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQ 481
+ ++P+AVT +L A A V + + + + ++ ++ G L+
Sbjct: 310 KEGIEPNAVTFLGVLSACAHGGLVEKSWLYFRLMQEYNIVPELKHYASVADCMSRAGLLE 369
Query: 482 TARRYFDSMSFKNLVSWNTMIMAYAIHG---FGTISIQLFSRMKQNGIEPNEST-FVSLL 537
A ++ + M K + +M + G +G + + + ++P +++ +V+L
Sbjct: 370 EAEKFLEDMPVKP----DEAVMGAVLSGCKVYGNVEVGERVARELIQLKPRKASYYVTLA 425
Query: 538 SSCSISGLVNEGWELFNSMK 557
S +G +E L MK
Sbjct: 426 GLYSAAGRFDEAESLRQWMK 445
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 114/230 (49%), Gaps = 16/230 (6%)
Query: 70 FVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTF 129
+VD G + +A LF+ M D+ ++ + G+ +G + + M Y G +D+
Sbjct: 160 YVDMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVM 219
Query: 130 PFVIKACGRLLSFIEGKKVHGKLIK----IGLDRDIYVCNSLIDMYFKFGFVEVAEKVFE 185
++ ACG+L + GK VHG I+ +GL+ + N++ DMY K ++ A VF
Sbjct: 220 VSLLMACGQLGALKHGKSVHGWCIRRCSCLGLN----LGNAITDMYVKCSILDYAHTVFV 275
Query: 186 AMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRG 245
M RD++SW+ ++ GY + GD + S F EML G +P+ ++ + L C+ G V
Sbjct: 276 NMSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLV-- 333
Query: 246 GKEIHCQVIRNGLELDIMVQ----TSLIDMYAKCGKVDYAERVFNEMTCK 291
E R E +I+ + S+ D ++ G ++ AE+ +M K
Sbjct: 334 --EKSWLYFRLMQEYNIVPELKHYASVADCMSRAGLLEEAEKFLEDMPVK 381
>AT1G74400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:27963953-27965341 FORWARD
Length = 462
Score = 209 bits (533), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 115/336 (34%), Positives = 190/336 (56%), Gaps = 9/336 (2%)
Query: 337 SCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEK-NMV 395
S ++ + L+G+ IH + F + ++T+LV Y G + +A VF EK N+V
Sbjct: 74 SSAQKASSLDGRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIV 133
Query: 396 SWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYI 455
W A+I+AY +N + EA+ELF + + ++ D V + L A A+L V ++I++
Sbjct: 134 LWTAMISAYTENENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRS 193
Query: 456 TKLE--LSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTI 513
K + L+ + N+++ MY K G+ + AR+ FD K++ ++ +MI YA++G
Sbjct: 194 IKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQE 253
Query: 514 SIQLFSRMK------QNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIE 567
S++LF +MK I PN+ TF+ +L +CS SGLV EG F SM MDYN+
Sbjct: 254 SLELFKKMKTIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREA 313
Query: 568 HYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTASRNNNDIFFAEFAAKHILSH 627
H+GCMVDL R+G+L A +FI +MP+ P IW +LL A + ++ E + I
Sbjct: 314 HFGCMVDLFCRSGHLKDAHEFINQMPIKPNTVIWRTLLGACSLHGNVELGEEVQRRIFEL 373
Query: 628 DNDNTGCYVLLANMYAEAGRWEDVEQIKLVMKKKGL 663
D D+ G YV L+N+YA G W++ +++ ++K+ +
Sbjct: 374 DRDHVGDYVALSNIYASKGMWDEKSKMRDRVRKRRM 409
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 164/318 (51%), Gaps = 20/318 (6%)
Query: 110 VIDFYHRMEYEGIGIDNFTFPFVIK-ACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLI 168
++DF HR +D+F+ F IK + + S ++G+++H + K+G + I + SL+
Sbjct: 48 LLDFRHRFRQSPSFVDSFSVLFAIKVSSAQKASSLDGRQIHALVRKLGFNAVIQIQTSLV 107
Query: 169 DMYFKFGFVEVAEKVFEAMPLR-DLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDR 227
Y G V+ A +VF+ P + ++V W M++ Y + ++++ FK M + D
Sbjct: 108 GFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIELDG 167
Query: 228 LSMISSLGGCSIGCCVRGGKEIHCQVIRNG--LELDIMVQTSLIDMYAKCGKVDYAERVF 285
+ + +L C+ V+ G+EI+ + I+ L +D+ ++ SL++MY K G+ + A ++F
Sbjct: 168 VIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLF 227
Query: 286 NEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRM------QEDNLIPDAITMINLLPSCS 339
+E K++ + +MI GYA+NG ES K+M Q+ + P+ +T I +L +CS
Sbjct: 228 DESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACS 287
Query: 340 KFGTLLEGK-----CIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEK-N 393
G + EGK I Y ++ P +VD++ + G LK A ++ K N
Sbjct: 288 HSGLVEEGKRHFKSMIMDYNLK----PREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPN 343
Query: 394 MVSWNAIIAAYVQNGRNE 411
V W ++ A +G E
Sbjct: 344 TVIWRTLLGACSLHGNVE 361
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 127/263 (48%), Gaps = 18/263 (6%)
Query: 61 LSLTRSLCEFVDS-GAMDNALYLF-EKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRME 118
+ + SL F S G +D A +F E + + +W +I ++ E I+ + RME
Sbjct: 100 IQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRME 159
Query: 119 YEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIG--LDRDIYVCNSLIDMYFKFGF 176
E I +D + AC L + G++++ + IK L D+ + NSL++MY K G
Sbjct: 160 AEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGE 219
Query: 177 VEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEK------PDRLSM 230
E A K+F+ +D+ ++ M+ GY + G +SL FK+M + + P+ ++
Sbjct: 220 TEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTF 279
Query: 231 ISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTS----LIDMYAKCGKVDYAERVFN 286
I L CS V GK +I ++ ++ + + ++D++ + G + A N
Sbjct: 280 IGVLMACSHSGLVEEGKRHFKSMI---MDYNLKPREAHFGCMVDLFCRSGHLKDAHEFIN 336
Query: 287 EMTCK-NIVAWNAMIGGYAINGH 308
+M K N V W ++G +++G+
Sbjct: 337 QMPIKPNTVIWRTLLGACSLHGN 359
>AT3G18840.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:6496198-6498940 FORWARD
Length = 698
Score = 209 bits (532), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 162/577 (28%), Positives = 268/577 (46%), Gaps = 79/577 (13%)
Query: 157 LDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPL-RDLVSWNCMVNGYRVIGDGLKSLMCF 215
L+R++Y N++I Y KF V+ A ++FE+ RDL+++N +++G+ DG +S
Sbjct: 50 LERNVYSWNAVIAAYVKFNNVKEARELFESDNCERDLITYNTLLSGFAKT-DGCESEAI- 107
Query: 216 KEMLGLGEKP-------DRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSL 268
EM G + D ++ + + + V G+++H +++ G + +SL
Sbjct: 108 -EMFGEMHRKEKDDIWIDDFTVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSL 166
Query: 269 IDMYAKCGKVDYAERVFN----------------EMTCK------------------NIV 294
I MY+KCGK +FN C+ + +
Sbjct: 167 IHMYSKCGKFKEVCNIFNGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTI 226
Query: 295 AWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYA 354
+WN +I GYA NG+ E+ M+E+ L D + +L S +L GK +H
Sbjct: 227 SWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARV 286
Query: 355 IRKMFLPHLVLETALVDMYGKCGQLKFAEC------------------------------ 384
++ + + + +VD+Y KCG +K+AE
Sbjct: 287 LKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAK 346
Query: 385 -VFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHC-LRNQTLKPDAVTIASILPAYAEL 442
+F ++EKN+V W A+ Y+ + + LEL + N+T PD++ + S+L A +
Sbjct: 347 RLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQ 406
Query: 443 ATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMI 502
A + K+IH + + + + A V MY+KCG+++ A R FDS ++ V +N MI
Sbjct: 407 AYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERIFDSSFERDTVMYNAMI 466
Query: 503 MAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNI 562
A HG S Q F M + G +P+E TF++LLS+C GLV EG + F SM YNI
Sbjct: 467 AGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNI 526
Query: 563 DYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPT-ARIWGSLLTASRNNNDIFFAEFAA 621
HY CM+DL G+ LD A + +E + V A I G+ L A N + +
Sbjct: 527 SPETGHYTCMIDLYGKAYRLDKAIELMEGIDQVEKDAVILGAFLNACSWNKNTELVKEVE 586
Query: 622 KHILSHDNDNTGCYVLLANMYAEAGRWE-DVEQIKLV 657
+ +L + N Y+ +AN YA + R + D+ I V
Sbjct: 587 EKLLVIEGSNGSRYIQIANAYASSARSKLDITDIDTV 623
Score = 175 bits (444), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 148/529 (27%), Positives = 233/529 (44%), Gaps = 85/529 (16%)
Query: 55 MIKPNSLSLTRSLCEFVDSGAMDNALYLFEKMN-QPDTYIWNVIIRGFS-NKGLFQEVID 112
M++ N S + +V + A LFE N + D +N ++ GF+ G E I+
Sbjct: 49 MLERNVYSWNAVIAAYVKFNNVKEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIE 108
Query: 113 FY---HRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLID 169
+ HR E + I ID+FT ++K +L + G+++HG L+K G D + +SLI
Sbjct: 109 MFGEMHRKEKDDIWIDDFTVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIH 168
Query: 170 MYFKFG-FVEV--------------------------------AEKVFEAMP-LRDLVSW 195
MY K G F EV A VF P L D +SW
Sbjct: 169 MYSKCGKFKEVCNIFNGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISW 228
Query: 196 NCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIR 255
N ++ GY G ++L M G K D S + L S ++ GKE+H +V++
Sbjct: 229 NTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLK 288
Query: 256 NGLELDIMVQTSLIDMYAKCGKVDYAE-------------------------------RV 284
NG + V + ++D+Y KCG + YAE R+
Sbjct: 289 NGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRL 348
Query: 285 FNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKR--MQEDNLIPDAITMINLLPSCSKFG 342
F+ ++ KN+V W AM GY +N +S L R + + PD++ M+++L +CS
Sbjct: 349 FDSLSEKNLVVWTAMFLGY-LNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQA 407
Query: 343 TLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIA 402
+ GK IHG+++R L L TA VDMY KCG +++AE +F E++ V +NA+IA
Sbjct: 408 YMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERIFDSSFERDTVMYNAMIA 467
Query: 403 AYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSEC-KQIHAYITKLELS 461
+G ++ + F + KPD +T ++L A V E K + I +S
Sbjct: 468 GCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNIS 527
Query: 462 SNTFTSNAIVYMYAKCGDLQTARRYFDSM-----------SFKNLVSWN 499
T ++ +Y K L A + + +F N SWN
Sbjct: 528 PETGHYTCMIDLYGKAYRLDKAIELMEGIDQVEKDAVILGAFLNACSWN 576
Score = 122 bits (306), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 104/452 (23%), Positives = 184/452 (40%), Gaps = 105/452 (23%)
Query: 242 CVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIG 301
C++ G H + I++G L + L+++Y+K G + A VF+EM +N+ +WNA+I
Sbjct: 3 CLKDGFLHHIRSIKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIA 62
Query: 302 GY------------------------------------AINGHFLESFTCLKRMQEDNLI 325
Y +E F + R ++D++
Sbjct: 63 AYVKFNNVKEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIW 122
Query: 326 PDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLK----- 380
D T+ ++ +K + G+ +HG ++ ++L+ MY KCG+ K
Sbjct: 123 IDDFTVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNI 182
Query: 381 ------------------FAECVFGRINE-----------KNMVSWNAIIAAYVQNGRNE 411
A C G I++ + +SWN +IA Y QNG E
Sbjct: 183 FNGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEE 242
Query: 412 EALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIV 471
EAL++ + LK D + ++L + L ++ K++HA + K SN F S+ IV
Sbjct: 243 EALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIV 302
Query: 472 YMYAKCGDLQ-------------------------------TARRYFDSMSFKNLVSWNT 500
+Y KCG+++ A+R FDS+S KNLV W
Sbjct: 303 DVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTA 362
Query: 501 MIMAYAIHGFGTISIQLFSRMKQNGIE-PNESTFVSLLSSCSISGLVNEGWELF-NSMKM 558
M + Y ++L N P+ VS+L +CS+ + G E+ +S++
Sbjct: 363 MFLGYLNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRT 422
Query: 559 DYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIE 590
+D + VD+ + GN++ A++ +
Sbjct: 423 GILMDKKL--VTAFVDMYSKCGNVEYAERIFD 452
>AT5G47460.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:19252463-19254193 REVERSE
Length = 576
Score = 208 bits (529), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 154/557 (27%), Positives = 258/557 (46%), Gaps = 72/557 (12%)
Query: 194 SWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQV 253
SW+ +V G + L E++ GEKPD ++ L V +++H V
Sbjct: 23 SWSTIVPALARFGS-IGVLRAAVELINDGEKPDASPLVHLLRVSGNYGYVSLCRQLHGYV 81
Query: 254 IRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESF 313
++G + + SL+ Y ++ A +VF+EM ++++WN+++ GY +G F E
Sbjct: 82 TKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGI 141
Query: 314 TCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIR-KMFLPHLVLETALVDM 372
+ ++ P+ + L +C++ G CIH ++ + ++V+ L+DM
Sbjct: 142 CLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDM 201
Query: 373 YGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRN---------- 422
YGKCG + A VF + EK+ VSWNAI+A+ +NG+ E L FH + N
Sbjct: 202 YGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMPNPDTVTYNELI 261
Query: 423 -------------QTLK----PDAVTIASILPAYAELATVSECKQ--------------- 450
Q L P++ + +IL Y E +
Sbjct: 262 DAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEY 321
Query: 451 --------------------IHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSM 490
IHA KL L S ++A++ MY+KCG L+ A F +M
Sbjct: 322 SLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTM 381
Query: 491 SFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNG-IEPNESTFVSLLSSCS---ISGLV 546
KNL+ WN MI YA +G +I+LF+++KQ ++P+ TF++LL+ CS + V
Sbjct: 382 PRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCSHCEVPMEV 441
Query: 547 NEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLT 606
G+ F M +Y I +EH ++ +G+ G + AKQ I+E W +LL
Sbjct: 442 MLGY--FEMMINEYRIKPSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDGVAWRALLG 499
Query: 607 ASRNNNDIFFAE-FAAKHILSHDND-NTGCYVLLANMYAEAGRWEDVEQIKLVMKKKGLA 664
A D+ A+ AAK I D D + Y++++N+YA RW +V QI+ +M++ G+
Sbjct: 500 ACSARKDLKAAKTVAAKMIELGDADKDEYLYIVMSNLYAYHERWREVGQIRKIMRESGVL 559
Query: 665 KTVDCCTVESKGKSQKF 681
K V ++S+ K +
Sbjct: 560 KEVGSSWIDSRTKCSSY 576
Score = 162 bits (409), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 111/378 (29%), Positives = 180/378 (47%), Gaps = 44/378 (11%)
Query: 63 LTRSLCEFVD-SGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEG 121
L+ SL F S ++++A +F++M PD WN ++ G+ G FQE I + +
Sbjct: 92 LSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSD 151
Query: 122 IGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDR-DIYVCNSLIDMYFKFGFVEVA 180
+ + F+F + AC RL G +H KL+K+GL++ ++ V N LIDMY K GF++ A
Sbjct: 152 VFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDA 211
Query: 181 EKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIG 240
VF+ M +D VSWN +V
Sbjct: 212 VLVFQHMEEKDTVSWNAIV----------------------------------------A 231
Query: 241 CCVRGGK-EIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAM 299
C R GK E+ D + LID + K G + A +V ++M N +WN +
Sbjct: 232 SCSRNGKLELGLWFFHQMPNPDTVTYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTI 291
Query: 300 IGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMF 359
+ GY + E+ +M + D ++ +L + + + G IH A +
Sbjct: 292 LTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGL 351
Query: 360 LPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHC 419
+V+ +AL+DMY KCG LK AE +F + KN++ WN +I+ Y +NG + EA++LF+
Sbjct: 352 DSRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQ 411
Query: 420 LRNQT-LKPDAVTIASIL 436
L+ + LKPD T ++L
Sbjct: 412 LKQERFLKPDRFTFLNLL 429
Score = 108 bits (270), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 133/282 (47%), Gaps = 26/282 (9%)
Query: 55 MIKPNSLSLTRSLCEFVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFY 114
M P++++ + FV SG +NA + M P++ WN I+ G+ N E +F+
Sbjct: 249 MPNPDTVTYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFF 308
Query: 115 HRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKF 174
+M G+ D ++ V+ A L G +H K+GLD + V ++LIDMY K
Sbjct: 309 TKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKC 368
Query: 175 GFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEM-LGLGEKPDRLSMISS 233
G ++ AE +F MP ++L+ WN M++GY GD ++++ F ++ KPDR + ++
Sbjct: 369 GMLKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNL 428
Query: 234 LGGCSIGCCVRGGKEIHCQVIRNGL--ELDIMVQT-----------SLIDMYAKCGKVDY 280
L CS HC+V + ++M+ SLI + G+V
Sbjct: 429 LAVCS-----------HCEVPMEVMLGYFEMMINEYRIKPSVEHCCSLIRAMGQRGEVWQ 477
Query: 281 AERVFNEMTCK-NIVAWNAMIGGYAINGHFLESFTCLKRMQE 321
A++V E + VAW A++G + + T +M E
Sbjct: 478 AKQVIQEFGFGYDGVAWRALLGACSARKDLKAAKTVAAKMIE 519
>AT5G61800.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:24830054-24831553 REVERSE
Length = 499
Score = 204 bits (518), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 136/446 (30%), Positives = 218/446 (48%), Gaps = 40/446 (8%)
Query: 255 RNGLELDIMVQTSLIDMYAKCGK--VDYAERVFNEMTCKNIVAWNAMIGGYAIN-GHFLE 311
+N + +++ + I A K V YA VF +T + +N +I ++ L
Sbjct: 39 QNSVFANVLFAITSISPSASASKEVVSYATSVFRFITNPSTFCFNTIIRICTLHEPSSLS 98
Query: 312 SFTCLKRMQEDNLIPDAITMINLLPSCS--KFGTLLEGKCIHGYAIRKMFLPHLVLETAL 369
S M+ ++ PD T + +C+ K G L K +H A+R L L L
Sbjct: 99 SKRFFVEMRRRSVPPDFHTFPFVFKACAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTL 158
Query: 370 VDMYG-------------------------------KCGQLKFAECVFGRINEKNMVSWN 398
+ +Y K ++ A +F + +++VSWN
Sbjct: 159 IRVYSLIAPIDSALQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWN 218
Query: 399 AIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKL 458
++I+ Y Q EA++LF + LKPD V I S L A A+ + K IH Y +
Sbjct: 219 SLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRK 278
Query: 459 ELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLF 518
L ++F + +V YAKCG + TA F+ S K L +WN MI A+HG G +++ F
Sbjct: 279 RLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYF 338
Query: 519 SRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGR 578
+M +GI+P+ TF+S+L CS SGLV+E LF+ M+ Y+++ ++HYGCM DLLGR
Sbjct: 339 RKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGR 398
Query: 579 TGNLDAAKQFIEEMPLVPTAR----IWGSLLTASRNNNDIFFAEFAAKHILSHDNDNTGC 634
G ++ A + IE+MP R W LL R + +I AE AA + + ++ G
Sbjct: 399 AGLIEEAAEMIEQMPKDGGNREKLLAWSGLLGGCRIHGNIEIAEKAANRVKALSPEDGGV 458
Query: 635 YVLLANMYAEAGRWEDVEQIKLVMKK 660
Y ++ MYA A RWE+V +++ ++ +
Sbjct: 459 YKVMVEMYANAERWEEVVKVREIIDR 484
Score = 150 bits (380), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 106/385 (27%), Positives = 184/385 (47%), Gaps = 60/385 (15%)
Query: 79 ALYLFEKMNQPDTYIWNVIIR--------GFSNKGLFQEVIDFYHRMEYEGIGIDNFTFP 130
A +F + P T+ +N IIR S+K F E M + D TFP
Sbjct: 67 ATSVFRFITNPSTFCFNTIIRICTLHEPSSLSSKRFFVE-------MRRRSVPPDFHTFP 119
Query: 131 FVIKACGRL----LSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKF------------ 174
FV KAC L+ + K +H + ++ GL D++ N+LI +Y
Sbjct: 120 FVFKACAAKKNGDLTLV--KTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDE 177
Query: 175 --------------GFVEV-----AEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCF 215
G V+ A ++F++MPLRDLVSWN +++GY + +++ F
Sbjct: 178 NPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLF 237
Query: 216 KEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKC 275
EM+ LG KPD ++++S+L C+ + GK IH R L +D + T L+D YAKC
Sbjct: 238 DEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKC 297
Query: 276 GKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLL 335
G +D A +F + K + WNAMI G A++G+ + ++M + PD +T I++L
Sbjct: 298 GFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVL 357
Query: 336 PSCSKFGTLLEGKCIHGYAIRKMFLPHLVLE--TALVDMYGKCGQLKFAECVFGRI---- 389
CS G + E + + +R ++ + ++ + D+ G+ G ++ A + ++
Sbjct: 358 VGCSHSGLVDEARNLFD-QMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDG 416
Query: 390 -NEKNMVSWNAIIAAYVQNGRNEEA 413
N + +++W+ ++ +G E A
Sbjct: 417 GNREKLLAWSGLLGGCRIHGNIEIA 441
Score = 103 bits (256), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 131/267 (49%), Gaps = 13/267 (4%)
Query: 49 ETPKRGMIKPNSLSLTRSLCEFVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQ 108
E P+R ++ N L + V + + A LF+ M D WN +I G++ +
Sbjct: 177 ENPQRDVVTYNVL-----IDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCR 231
Query: 109 EVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLI 168
E I + M G+ DN + AC + + +GK +H + L D ++ L+
Sbjct: 232 EAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLV 291
Query: 169 DMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRL 228
D Y K GF++ A ++FE + L +WN M+ G + G+G ++ F++M+ G KPD +
Sbjct: 292 DFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGV 351
Query: 229 SMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQ--TSLIDMYAKCGKVDYAERVFN 286
+ IS L GCS V + + Q +R+ +++ ++ + D+ + G ++ A +
Sbjct: 352 TFISVLVGCSHSGLVDEARNLFDQ-MRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIE 410
Query: 287 EM-----TCKNIVAWNAMIGGYAINGH 308
+M + ++AW+ ++GG I+G+
Sbjct: 411 QMPKDGGNREKLLAWSGLLGGCRIHGN 437
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 79/169 (46%), Gaps = 6/169 (3%)
Query: 45 KQMSETPKRGMIKPNSLSLTRSLCEFVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNK 104
K + + KR + +S T + + G +D A+ +FE + + WN +I G +
Sbjct: 269 KAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMH 328
Query: 105 GLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKI-GLDRDIYV 163
G + +D++ +M GI D TF V+ C E + + ++ + ++R++
Sbjct: 329 GNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKH 388
Query: 164 CNSLIDMYFKFGFVEVAEKVFEAMP-----LRDLVSWNCMVNGYRVIGD 207
+ D+ + G +E A ++ E MP L++W+ ++ G R+ G+
Sbjct: 389 YGCMADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAWSGLLGGCRIHGN 437
>AT5G42450.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:16977660-16978850 FORWARD
Length = 396
Score = 201 bits (511), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 114/355 (32%), Positives = 198/355 (55%), Gaps = 7/355 (1%)
Query: 361 PHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELF-HC 419
P++V T L+ Y K + + A +F + E+++V+WNA+I + Q GRNEEA+ F
Sbjct: 36 PNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDM 95
Query: 420 LRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITK-LELSSNTFTSNAIVYMYAKCG 478
LR + P+ T + A + +A+ K IHA K L N F N+++ Y+KCG
Sbjct: 96 LREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCG 155
Query: 479 DLQTARRYFDSMS--FKNLVSWNTMIMAYAIHGFGTISIQLFSRM-KQNGIEPNESTFVS 535
+++ + F+ + +N+VSWN+MI YA +G G ++ +F +M K + PN T +
Sbjct: 156 NMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILG 215
Query: 536 LLSSCSISGLVNEGWELFNSMKMDYNID--YGIEHYGCMVDLLGRTGNLDAAKQFIEEMP 593
+L +C+ +GL+ EG+ FN DY+ +EHY CMVD+L R+G A++ I+ MP
Sbjct: 216 VLFACNHAGLIQEGYMYFNKAVNDYDDPNLLELEHYACMVDMLSRSGRFKEAEELIKSMP 275
Query: 594 LVPTARIWGSLLTASRNNNDIFFAEFAAKHILSHDNDNTGCYVLLANMYAEAGRWEDVEQ 653
L P W +LL + +++ A+ AA IL D + YV+L+N Y+ W++V
Sbjct: 276 LDPGIGFWKALLGGCQIHSNKRLAKLAASKILELDPRDVSSYVMLSNAYSAMENWQNVSL 335
Query: 654 IKLVMKKKGLAKTVDCCTVESKGKSQKFINNNKSHQQAYMIYDVLDIILKKIGED 708
I+ MK+ GL + C +E + + + F+N +K+++ +Y +L ++ + + E+
Sbjct: 336 IRRKMKETGLKRFTGCSWIEVRDQIRVFVNADKNNELKDEVYRMLALVSQHLEEN 390
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/234 (32%), Positives = 121/234 (51%), Gaps = 8/234 (3%)
Query: 158 DRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKE 217
D ++ +LI Y K E A +F AMP R +V+WN ++ G+ G +++ F +
Sbjct: 35 DPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVD 94
Query: 218 MLGLGEK-PDRLSMISSLGGCSIGCCVRGGKEIH-CQVIRNGLELDIMVQTSLIDMYAKC 275
ML G P+ + ++ S GK IH C + G ++ V SLI Y+KC
Sbjct: 95 MLREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKC 154
Query: 276 GKVDYAERVFN--EMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQED-NLIPDAITMI 332
G ++ + FN E +NIV+WN+MI GYA NG E+ ++M +D NL P+ +T++
Sbjct: 155 GNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTIL 214
Query: 333 NLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLV-LE--TALVDMYGKCGQLKFAE 383
+L +C+ G + EG A+ P+L+ LE +VDM + G+ K AE
Sbjct: 215 GVLFACNHAGLIQEGYMYFNKAVNDYDDPNLLELEHYACMVDMLSRSGRFKEAE 268
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 130/262 (49%), Gaps = 13/262 (4%)
Query: 58 PNSLSLTRSLCEFVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRM 117
PN +S+T + ++ + AL LF M + WN +I GFS G +E ++ + M
Sbjct: 36 PNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDM 95
Query: 118 EYEGIGIDN-FTFPFVIKACGRLLSFIEGKKVHGKLIK-IGLDRDIYVCNSLIDMYFKFG 175
EG+ I N TFP I A + S GK +H IK +G +++V NSLI Y K G
Sbjct: 96 LREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCG 155
Query: 176 FVEVAEKVFEAM--PLRDLVSWNCMVNGYRVIGDGLKSLMCFKEML-GLGEKPDRLSMIS 232
+E + F + R++VSWN M+ GY G G +++ F++M+ +P+ ++++
Sbjct: 156 NMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILG 215
Query: 233 SLGGCSIGCCVRGG-----KEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNE 287
L C+ ++ G K ++ N LEL+ ++DM ++ G+ AE +
Sbjct: 216 VLFACNHAGLIQEGYMYFNKAVNDYDDPNLLELEHY--ACMVDMLSRSGRFKEAEELIKS 273
Query: 288 MTCK-NIVAWNAMIGGYAINGH 308
M I W A++GG I+ +
Sbjct: 274 MPLDPGIGFWKALLGGCQIHSN 295
>AT3G26630.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:9791572-9792939 REVERSE
Length = 455
Score = 199 bits (506), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 119/383 (31%), Positives = 192/383 (50%), Gaps = 33/383 (8%)
Query: 247 KEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAIN 306
K+IH ++I++ L D ++ LI + + G+ YA VFN++ + WN MI ++N
Sbjct: 37 KQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPSTFTWNLMIRSLSVN 96
Query: 307 GHFLESFTCLKRMQEDNLIP-DAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVL 365
E+ M + D T ++ +C ++ G +HG AI+ F +
Sbjct: 97 HKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFFNDVFF 156
Query: 366 ETALVDMYGKCG-------------------------------QLKFAECVFGRINEKNM 394
+ L+D+Y KCG QL AE VF ++ +N+
Sbjct: 157 QNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNV 216
Query: 395 VSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAY 454
VSW A+I AYV+N R +EA +LF ++ +KP+ TI ++L A +L ++S + +H Y
Sbjct: 217 VSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDY 276
Query: 455 ITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTIS 514
K + F A++ MY+KCG LQ AR+ FD M K+L +WN+MI + +HG G +
Sbjct: 277 AHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCGEEA 336
Query: 515 IQLFSRMKQNG-IEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMV 573
+ LF M++ +EP+ TFV +LS+C+ +G V +G F M Y I EH CM+
Sbjct: 337 LSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQVYGISPIREHNACMI 396
Query: 574 DLLGRTGNLDAAKQFIEEMPLVP 596
LL + ++ A +E M P
Sbjct: 397 QLLEQALEVEKASNLVESMDSDP 419
Score = 175 bits (444), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 105/350 (30%), Positives = 173/350 (49%), Gaps = 36/350 (10%)
Query: 131 FVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLR 190
+ ++ C +F + K++H K+IK L D + LI + FG + A VF +
Sbjct: 25 YFLRTCS---NFSQLKQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSP 81
Query: 191 DLVSWNCMVNGYRVIGDGLKSLMCF-KEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEI 249
+WN M+ V ++L+ F M+ + D+ + + C +R G ++
Sbjct: 82 STFTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQV 141
Query: 250 HCQVIRNGLELDIMVQTSLIDMYAKCGK-------------------------------V 278
H I+ G D+ Q +L+D+Y KCGK +
Sbjct: 142 HGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQL 201
Query: 279 DYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSC 338
D AE VFN+M +N+V+W AMI Y N E+F +RMQ D++ P+ T++NLL +
Sbjct: 202 DSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQAS 261
Query: 339 SKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWN 398
++ G+L G+ +H YA + F+ L TAL+DMY KCG L+ A VF + K++ +WN
Sbjct: 262 TQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWN 321
Query: 399 AIIAAYVQNGRNEEALELFHCLRNQ-TLKPDAVTIASILPAYAELATVSE 447
++I + +G EEAL LF + + +++PDA+T +L A A V +
Sbjct: 322 SMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKD 371
Score = 152 bits (383), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 100/323 (30%), Positives = 157/323 (48%), Gaps = 34/323 (10%)
Query: 59 NSLSLTRSLCEFVDS-GAMDNALYLFEKMNQPDTYIWNVIIRGFS-NKGLFQEVIDFYHR 116
N L R L S G A +F ++ P T+ WN++IR S N + ++ F
Sbjct: 50 NDQLLVRQLISVSSSFGETQYASLVFNQLQSPSTFTWNLMIRSLSVNHKPREALLLFILM 109
Query: 117 MEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFK--- 173
M D FTFPFVIKAC S G +VHG IK G D++ N+L+D+YFK
Sbjct: 110 MISHQSQFDKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGK 169
Query: 174 -----------------------FGFV-----EVAEKVFEAMPLRDLVSWNCMVNGYRVI 205
+G V + AE VF MP+R++VSW M+ Y
Sbjct: 170 PDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKN 229
Query: 206 GDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQ 265
++ F+ M KP+ ++++ L + + G+ +H +NG LD +
Sbjct: 230 RRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLG 289
Query: 266 TSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLI 325
T+LIDMY+KCG + A +VF+ M K++ WN+MI ++G E+ + + M+E+ +
Sbjct: 290 TALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCGEEALSLFEEMEEEASV 349
Query: 326 -PDAITMINLLPSCSKFGTLLEG 347
PDAIT + +L +C+ G + +G
Sbjct: 350 EPDAITFVGVLSACANTGNVKDG 372
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 102/218 (46%), Gaps = 6/218 (2%)
Query: 39 KSNPTKKQMSETPKRGMIKPNSLSLTRSLCEFVDSGAMDNALYLFEKMNQPDTYIWNVII 98
K + +K + P R ++ S T L V + +D+A +F +M + W +I
Sbjct: 169 KPDSGRKVFDKMPGRSIV-----SWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMI 223
Query: 99 RGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLD 158
+ E + RM+ + + + FT +++A +L S G+ VH K G
Sbjct: 224 TAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFV 283
Query: 159 RDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEM 218
D ++ +LIDMY K G ++ A KVF+ M + L +WN M+ V G G ++L F+EM
Sbjct: 284 LDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCGEEALSLFEEM 343
Query: 219 LGLGE-KPDRLSMISSLGGCSIGCCVRGGKEIHCQVIR 255
+PD ++ + L C+ V+ G ++I+
Sbjct: 344 EEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQ 381
>AT3G51320.1 | Symbols: | INVOLVED IN: biological_process unknown;
EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 6
growth stages; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: binding
(TAIR:AT3G62890.1); Has 12158 Blast hits to 4373
proteins in 95 species: Archae - 0; Bacteria - 0;
Metazoa - 23; Fungi - 18; Plants - 12009; Viruses - 0;
Other Eukaryotes - 108 (source: NCBI BLink). |
chr3:19049853-19051445 REVERSE
Length = 530
Score = 195 bits (496), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 122/462 (26%), Positives = 225/462 (48%), Gaps = 36/462 (7%)
Query: 248 EIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAING 307
++H ++I +G D L+ ++ G Y ++ + + N + Y ++
Sbjct: 40 QVHARLITSGNFWDSSWAIRLLKSSSRFGDSSYTVSIYRSI--GKLYCANPVFKAYLVSS 97
Query: 308 HFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLET 367
++ + +PD+ T ++L+ K + GK HG AI+ L ++
Sbjct: 98 SPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHGCDQVLPVQN 157
Query: 368 ALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTL-- 425
+L+ MY CG L A+ +F I ++++VSWN+IIA V+NG A +LF + ++ +
Sbjct: 158 SLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIIS 217
Query: 426 -----------------------------KPDAVTIASILPAYAELATVSECKQIHAYIT 456
+ + T+ +L A A + E + +HA +
Sbjct: 218 WNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLI 277
Query: 457 KLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQ 516
+ L+S+ A++ MY KC ++ ARR FDS+S +N V+WN MI+A+ +HG ++
Sbjct: 278 RTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLE 337
Query: 517 LFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLL 576
LF M + P+E TFV +L C+ +GLV++G ++ M ++ I H CM +L
Sbjct: 338 LFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCMANLY 397
Query: 577 GRTGNLDAAKQFIEEMP---LVPTARIWGSLLTASRNNNDIFFAEFAAKHILSHDNDNTG 633
G + A++ ++ +P + P + W +LL++SR + E AK ++ D N
Sbjct: 398 SSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGESIAKSLIETDPLNYK 457
Query: 634 CYVLLANMYAEAGRWEDVEQIKLVMKKKGLAKTVDCCTVESK 675
Y LL N+Y+ GRWEDV +++ ++K++ + + C V+ K
Sbjct: 458 YYHLLMNIYSVTGRWEDVNRVREMVKERKIGRIPGCGLVDLK 499
Score = 156 bits (394), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 120/487 (24%), Positives = 207/487 (42%), Gaps = 65/487 (13%)
Query: 147 KVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIG 206
+VH +LI G D L+ +FG ++ + + L N + Y V
Sbjct: 40 QVHARLITSGNFWDSSWAIRLLKSSSRFGDSSYTVSIYRS--IGKLYCANPVFKAYLVSS 97
Query: 207 DGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQT 266
++L + ++L G PD + +S + CCV GK H Q I++G + + VQ
Sbjct: 98 SPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHGCDQVLPVQN 157
Query: 267 SLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIP 326
SL+ MY CG +D A+++F E+ ++IV+WN++I G NG L + M + N+I
Sbjct: 158 SLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIIS 217
Query: 327 DAI-------------------------------TMINLLPSCSKFGTLLEGKCIHGYAI 355
I T++ LL +C + L EG+ +H I
Sbjct: 218 WNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLI 277
Query: 356 RKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALE 415
R +V++TAL+DMYGKC ++ A +F ++ +N V+WN +I A+ +GR E LE
Sbjct: 278 RTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLE 337
Query: 416 LFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYA 475
LF + N L+PD VT +L A VS+ + ++ +
Sbjct: 338 LFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVD------------------ 379
Query: 476 KCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVS 535
+ Q + NL Y+ GF + + + + P + + +
Sbjct: 380 ---EFQIKPNFGHQWCMANL---------YSSAGFPEEAEEALKNLPDEDVTPESTKWAN 427
Query: 536 LLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLV 595
LLSS +G G + S+ ++Y ++Y ++++ TG + + E +
Sbjct: 428 LLSSSRFTGNPTLGESIAKSLIETDPLNY--KYYHLLMNIYSVTGRWEDVNRVREMVKER 485
Query: 596 PTARIWG 602
RI G
Sbjct: 486 KIGRIPG 492
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 152/324 (46%), Gaps = 32/324 (9%)
Query: 92 YIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGK 151
Y N + + + ++ + FY + G D++TF +I + GK HG+
Sbjct: 84 YCANPVFKAYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQ 143
Query: 152 LIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLK- 210
IK G D+ + V NSL+ MY G +++A+K+F +P RD+VSWN ++ G GD L
Sbjct: 144 AIKHGCDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAA 203
Query: 211 ------------------------------SLMCFKEMLGLGEKPDRLSMISSLGGCSIG 240
S+ F+EM+ G + + +++ L C
Sbjct: 204 HKLFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRS 263
Query: 241 CCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMI 300
++ G+ +H +IR L +++ T+LIDMY KC +V A R+F+ ++ +N V WN MI
Sbjct: 264 ARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMI 323
Query: 301 GGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFL 360
+ ++G + M L PD +T + +L C++ G + +G+ + + + +
Sbjct: 324 LAHCLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQI 383
Query: 361 -PHLVLETALVDMYGKCGQLKFAE 383
P+ + + ++Y G + AE
Sbjct: 384 KPNFGHQWCMANLYSSAGFPEEAE 407
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 119/253 (47%), Gaps = 6/253 (2%)
Query: 43 TKKQMSETPKRGMIKPNSLSLTRSLCEFVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFS 102
KK E PKR ++ NS+ + V +G + A LF++M + WN++I +
Sbjct: 172 AKKLFVEIPKRDIVSWNSI-----IAGMVRNGDVLAAHKLFDEMPDKNIISWNIMISAYL 226
Query: 103 NKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIY 162
I + M G + T ++ ACGR EG+ VH LI+ L+ +
Sbjct: 227 GANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTFLNSSVV 286
Query: 163 VCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLG 222
+ +LIDMY K V +A ++F+++ +R+ V+WN M+ + + G L F+ M+
Sbjct: 287 IDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLELFEAMINGM 346
Query: 223 EKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRN-GLELDIMVQTSLIDMYAKCGKVDYA 281
+PD ++ + L GC+ V G+ + ++ ++ + Q + ++Y+ G + A
Sbjct: 347 LRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCMANLYSSAGFPEEA 406
Query: 282 ERVFNEMTCKNIV 294
E + +++
Sbjct: 407 EEALKNLPDEDVT 419
>AT1G09220.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:2977952-2978968 REVERSE
Length = 338
Score = 194 bits (493), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 103/294 (35%), Positives = 172/294 (58%), Gaps = 5/294 (1%)
Query: 377 GQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELF-HCLRNQTLKPDAVTIASI 435
G + A C ++ + +VSW II Y + + +EA+ LF + +KP+ +TI +I
Sbjct: 37 GDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAI 96
Query: 436 LPAYAELATVSECKQIHAYITKLE-LSSNTFTSNAIVYMYAKCGDLQTARRYFDSM--SF 492
LPA L + C +HAY+ K + + +N+++ YAKCG +Q+A ++F +
Sbjct: 97 LPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGR 156
Query: 493 KNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGW-E 551
KNLVSW TMI A+AIHG G ++ +F M++ G++PN T +S+L++CS GL E + E
Sbjct: 157 KNLVSWTTMISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLE 216
Query: 552 LFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTASRNN 611
FN+M +Y I ++HYGC+VD+L R G L+ A++ E+P+ A +W LL A
Sbjct: 217 FFNTMVNEYKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVY 276
Query: 612 NDIFFAEFAAKHILSHDNDNTGCYVLLANMYAEAGRWEDVEQIKLVMKKKGLAK 665
+D AE + ++ + + G YVL++N++ GR+ D ++ + M +G+AK
Sbjct: 277 DDAELAERVTRKLMELERSHGGDYVLMSNIFCGTGRFLDAQRFRKQMDVRGVAK 330
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 125/257 (48%), Gaps = 15/257 (5%)
Query: 158 DRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKE 217
+R+ N +I G E A E MP R +VSW +++GY + ++++ F
Sbjct: 20 ERNPVTWNVMITGLTNLGDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSR 79
Query: 218 MLGLGE-KPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNG-LELDIMVQTSLIDMYAKC 275
M+ KP+ +++++ L ++ +H V + G + DI V SLID YAKC
Sbjct: 80 MVACDAIKPNEITILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKC 139
Query: 276 GKVDYAERVFNEMTC--KNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMIN 333
G + A + F E+ KN+V+W MI +AI+G E+ + K M+ L P+ +TMI+
Sbjct: 140 GCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMIS 199
Query: 334 LLPSCSKFGTLLE------GKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFG 387
+L +CS G E ++ Y I P + LVDM + G+L+ AE +
Sbjct: 200 VLNACSHGGLAEEEFLEFFNTMVNEYKI----TPDVKHYGCLVDMLRRKGRLEEAEKIAL 255
Query: 388 RIN-EKNMVSWNAIIAA 403
I E+ V W ++ A
Sbjct: 256 EIPIEEKAVVWRMLLGA 272
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 125/268 (46%), Gaps = 12/268 (4%)
Query: 45 KQMSETPKRGMIKPNSLSLTRSLCEFVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNK 104
K E P+R N ++ + + G + AL EKM W II G++
Sbjct: 13 KVFDEMPER-----NPVTWNVMITGLTNLGDFEKALCFLEKMPNRTVVSWTTIIDGYARV 67
Query: 105 GLFQEVIDFYHRM-EYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIG-LDRDIY 162
+E I + RM + I + T ++ A L VH + K G + DI
Sbjct: 68 DKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIR 127
Query: 163 VCNSLIDMYFKFGFVEVAEKVFEAMP--LRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLG 220
V NSLID Y K G ++ A K F +P ++LVSW M++ + + G G +++ FK+M
Sbjct: 128 VTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDMER 187
Query: 221 LGEKPDRLSMISSLGGCSIGCCVRGG--KEIHCQVIRNGLELDIMVQTSLIDMYAKCGKV 278
LG KP+R++MIS L CS G + + V + D+ L+DM + G++
Sbjct: 188 LGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKITPDVKHYGCLVDMLRRKGRL 247
Query: 279 DYAERVFNEMTCKN-IVAWNAMIGGYAI 305
+ AE++ E+ + V W ++G ++
Sbjct: 248 EEAEKIALEIPIEEKAVVWRMLLGACSV 275
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 125/276 (45%), Gaps = 38/276 (13%)
Query: 271 MYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQE--------- 321
MY G + A +VF+EM +N V WN MI G G F ++ L++M
Sbjct: 1 MYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKMPNRTVVSWTTI 60
Query: 322 -----------------------DNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKM 358
D + P+ IT++ +LP+ G L +H Y ++
Sbjct: 61 IDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGSVHAYVGKRG 120
Query: 359 FLP-HLVLETALVDMYGKCGQLKFAECVFGRI--NEKNMVSWNAIIAAYVQNGRNEEALE 415
F+P + + +L+D Y KCG ++ A F I KN+VSW +I+A+ +G +EA+
Sbjct: 121 FVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAVS 180
Query: 416 LFHCLRNQTLKPDAVTIASILPA--YAELATVSECKQIHAYITKLELSSNTFTSNAIVYM 473
+F + LKP+ VT+ S+L A + LA + + + + +++ + +V M
Sbjct: 181 MFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKITPDVKHYGCLVDM 240
Query: 474 YAKCGDLQTARRYFDSMSFKN-LVSWNTMIMAYAIH 508
+ G L+ A + + + V W ++ A +++
Sbjct: 241 LRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVY 276
>AT3G18970.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:6543699-6545117 REVERSE
Length = 472
Score = 192 bits (488), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 116/332 (34%), Positives = 176/332 (53%), Gaps = 17/332 (5%)
Query: 347 GKCIHGYAIRKMFL-PHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYV 405
G+ +HG + FL ++ T L+ Y K G L++A VF + E+ V+WNA+I Y
Sbjct: 130 GRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYC 189
Query: 406 Q-----NGRNEEALELFHCLR--NQTLKPDAVTIASILPAYAELATVSECKQIHAYITKL 458
N +A+ LF ++P T+ +L A ++ + +H YI KL
Sbjct: 190 SHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKL 249
Query: 459 ELSS--NTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQ 516
+ + F A+V MY+KCG L A F+ M KN+ +W +M A++G G +
Sbjct: 250 GFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPN 309
Query: 517 LFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLL 576
L +RM ++GI+PNE TF SLLS+ GLV EG ELF SMK + + IEHYGC+VDLL
Sbjct: 310 LLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLL 369
Query: 577 GRTGNLDAAKQFIEEMPLVPTARIWGSLLTASRNNNDIFFAEFAAKHILSHDNDN----- 631
G+ G + A QFI MP+ P A + SL A + E K +L + ++
Sbjct: 370 GKAGRIQEAYQFILAMPIKPDAILLRSLCNACSIYGETVMGEEIGKALLEIEREDEKLSG 429
Query: 632 TGC--YVLLANMYAEAGRWEDVEQIKLVMKKK 661
+ C YV L+N+ A G+W +VE+++ MK++
Sbjct: 430 SECEDYVALSNVLAHKGKWVEVEKLRKEMKER 461
Score = 120 bits (300), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 92/317 (29%), Positives = 154/317 (48%), Gaps = 16/317 (5%)
Query: 80 LYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRL 139
L +F + PD +++N +++ + + ++ + + ++ TF FV+ AC R
Sbjct: 64 LLVFPRFGHPDKFLFNTLLKCSKPEDSIRIFANYASKSSL--LYLNERTFVFVLGACARS 121
Query: 140 LSFIE---GKKVHGKLIKIG-LDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSW 195
S G+ VHG + K+G L + +L+ Y K G + A KVF+ MP R V+W
Sbjct: 122 ASSSALRVGRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTW 181
Query: 196 NCMVNGYRVIGD-----GLKSLMCFKEM--LGLGEKPDRLSMISSLGGCSIGCCVRGGKE 248
N M+ GY D K+++ F+ G G +P +M+ L S + G
Sbjct: 182 NAMIGGYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSL 241
Query: 249 IHCQVIRNGL--ELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAIN 306
+H + + G E+D+ + T+L+DMY+KCG ++ A VF M KN+ W +M G A+N
Sbjct: 242 VHGYIEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALN 301
Query: 307 GHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEG-KCIHGYAIRKMFLPHLVL 365
G E+ L RM E + P+ IT +LL + G + EG + R P +
Sbjct: 302 GRGNETPNLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEH 361
Query: 366 ETALVDMYGKCGQLKFA 382
+VD+ GK G+++ A
Sbjct: 362 YGCIVDLLGKAGRIQEA 378
>AT1G20230.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:7009570-7011852 FORWARD
Length = 760
Score = 187 bits (474), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 136/554 (24%), Positives = 247/554 (44%), Gaps = 75/554 (13%)
Query: 77 DNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKAC 136
++A + + + P Y ++ +I + LF + I + RM G+ D+ P + K C
Sbjct: 67 NDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVC 126
Query: 137 GRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRD----- 191
L +F GK++H GLD D +V S+ MY + G + A KVF+ M +D
Sbjct: 127 AELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCS 186
Query: 192 ------------------------------LVSWNCMVNGYRVIGDGLKSLMCFKEMLGL 221
+VSWN +++G+ G ++++ F+++ L
Sbjct: 187 ALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHL 246
Query: 222 GEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYA 281
G PD++++ S L + G+ IH VI+ GL D V +++IDMY K G V
Sbjct: 247 GFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGI 306
Query: 282 ERVFNEM------TCK-----------------------------NIVAWNAMIGGYAIN 306
+FN+ C N+V+W ++I G A N
Sbjct: 307 ISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQN 366
Query: 307 GHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLE 366
G +E+ + MQ + P+ +T+ ++LP+C L G+ HG+A+R L ++ +
Sbjct: 367 GKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVG 426
Query: 367 TALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLK 426
+AL+DMY KCG++ ++ VF + KN+V WN+++ + +G+ +E + +F L LK
Sbjct: 427 SALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLK 486
Query: 427 PDAVTIASILPAYAELATVSE-CKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARR 485
PD ++ S+L A ++ E K + + + +V + + G LQ A
Sbjct: 487 PDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYD 546
Query: 486 YFDSMSFK-NLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEP-NESTFVSLLSSCSIS 543
M F+ + W ++ + + + + + K +EP N T+V L + +
Sbjct: 547 LIKEMPFEPDSCVWGALLNSCRLQ--NNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAK 604
Query: 544 GLVNEGWELFNSMK 557
G+ E + N M+
Sbjct: 605 GMWTEVDSIRNKME 618
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 77/346 (22%), Positives = 154/346 (44%), Gaps = 35/346 (10%)
Query: 248 EIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAING 307
+ H +++++G + D + LI Y+ + A+ V + I +++++I
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95
Query: 308 HFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLET 367
F +S RM LIPD+ + NL C++ GK IH + ++
Sbjct: 96 LFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQG 155
Query: 368 ALVDMYGKCGQLKFAECVFGRINEK----------------------------------- 392
++ MY +CG++ A VF R+++K
Sbjct: 156 SMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEA 215
Query: 393 NMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIH 452
N+VSWN I++ + ++G ++EA+ +F + + PD VT++S+LP+ + ++ + IH
Sbjct: 216 NIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIH 275
Query: 453 AYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGT 512
Y+ K L + +A++ MY K G + F+ N I + +G
Sbjct: 276 GYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVD 335
Query: 513 ISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKM 558
++++F K+ +E N ++ S+++ C+ +G E ELF M++
Sbjct: 336 KALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQV 381
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 119/234 (50%), Gaps = 6/234 (2%)
Query: 73 SGAMDNALYLFEKMNQPDTYI----WNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFT 128
+G +D AL +FE + + W II G + G E ++ + M+ G+ ++ T
Sbjct: 331 NGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVT 390
Query: 129 FPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMP 188
P ++ ACG + + G+ HG +++ L +++V ++LIDMY K G + +++ VF MP
Sbjct: 391 IPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMP 450
Query: 189 LRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGC-SIGCCVRGGK 247
++LV WN ++NG+ + G + + F+ ++ KPD +S S L C +G G K
Sbjct: 451 TKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWK 510
Query: 248 EIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCK-NIVAWNAMI 300
G++ + + ++++ + GK+ A + EM + + W A++
Sbjct: 511 YFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALL 564
>AT2G15690.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:6831855-6833594 REVERSE
Length = 579
Score = 183 bits (464), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 115/395 (29%), Positives = 203/395 (51%), Gaps = 41/395 (10%)
Query: 411 EEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAI 470
++A+EL ++ PD + + A L ++ K++H + + + + +N +
Sbjct: 222 KDAIELL----DKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMV 277
Query: 471 VYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNE 530
+ M+ +C + A+R FD M K++ SW+ M+ AY+ +G G ++ LF M ++G++PNE
Sbjct: 278 ISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNE 337
Query: 531 STFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIE 590
TF+++ +C+ G + E + F+SMK ++ I EHY ++ +LG+ G+L A+Q+I
Sbjct: 338 ETFLTVFLACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIR 397
Query: 591 EMPLVPTARIWGSLLTASRNNNDIFFAEFAAKHILSHDNDNTGCYVLLANMYAEAGRWED 650
++P PTA W ++ +R + DI ++ + ++ D
Sbjct: 398 DLPFEPTADFWEAMRNYARLHGDIDLEDYMEELMV------------------------D 433
Query: 651 VEQIKLVMKKKGLAKT---VDCCTVESKGKSQKFINNNKSHQQAYMIYDVLDIILKKIGE 707
V+ K V+ K + V SK + +F N D + K G
Sbjct: 434 VDPSKAVINKIPTPPPKSFKETNMVTSKSRILEFRN-------LTFYKDEAKEMAAKKGV 486
Query: 708 DVYIHSLSKFRPADVIKK-KMKSPQNHSVKLAICFGLISTAIGKPIIIRKNTRICKDCHI 766
VY+ ++F D+ ++ K ++ HS +LAI +G+I T K + I KN R+C DCH
Sbjct: 487 -VYVPD-TRFVLHDIDQEAKEQALLYHSERLAIAYGIICTPPRKTLTIIKNLRVCGDCHN 544
Query: 767 AAKKISRVTKREIIVGDSKIFHHFEDGRCSCGDYW 801
K +S++ R +IV D+K FHHF+DG+CSCGDYW
Sbjct: 545 FIKIMSKIIGRVLIVRDNKRFHHFKDGKCSCGDYW 579
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 95/205 (46%), Gaps = 11/205 (5%)
Query: 315 CLKRMQEDNL-------IPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLET 367
C +R+ +D + +PD + L SC+ +L K +H + ++ F L
Sbjct: 216 CQRRLYKDAIELLDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNN 275
Query: 368 ALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKP 427
++ M+G+C + A+ VF + +K+M SW+ ++ AY NG ++AL LF + LKP
Sbjct: 276 MVISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKP 335
Query: 428 DAVTIASILPAYAELATVSECKQIHAYITKLE--LSSNTFTSNAIVYMYAKCGDLQTARR 485
+ T ++ A A + + E +H K E +S T ++ + KCG L A +
Sbjct: 336 NEETFLTVFLACATVGGIEEAF-LHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQ 394
Query: 486 YFDSMSFKNLVS-WNTMIMAYAIHG 509
Y + F+ W M +HG
Sbjct: 395 YIRDLPFEPTADFWEAMRNYARLHG 419
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 78/174 (44%), Gaps = 13/174 (7%)
Query: 217 EMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCG 276
E+L G PDR + C+ + K++H +++ D + +I M+ +C
Sbjct: 226 ELLDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECS 285
Query: 277 KVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLP 336
+ A+RVF+ M K++ +W+ M+ Y+ NG ++ + M + L P+ T + +
Sbjct: 286 SITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFL 345
Query: 337 SCSKFGTLLEG-------KCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAE 383
+C+ G + E K HG + P ++ + GKCG L AE
Sbjct: 346 ACATVGGIEEAFLHFDSMKNEHGIS------PKTEHYLGVLGVLGKCGHLVEAE 393
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 91/203 (44%), Gaps = 14/203 (6%)
Query: 103 NKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIY 162
+ L+++ I+ + G D F + ++C L S KKVH ++ D
Sbjct: 217 QRRLYKDAIELLDK----GAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPK 272
Query: 163 VCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLG 222
+ N +I M+ + + A++VF+ M +D+ SW+ M+ Y G G +L F+EM G
Sbjct: 273 LNNMVISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHG 332
Query: 223 EKPDRLSMISSLGGCSIGCCVRGGKE---IHCQVIRN--GLELDIMVQTSLIDMYAKCGK 277
KP+ + ++ + C GG E +H ++N G+ ++ + KCG
Sbjct: 333 LKPNEETFLTVF----LACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGH 388
Query: 278 VDYAERVFNEMTCKNIVA-WNAM 299
+ AE+ ++ + W AM
Sbjct: 389 LVEAEQYIRDLPFEPTADFWEAM 411
>AT1G10330.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3388747-3390150 FORWARD
Length = 467
Score = 176 bits (446), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 117/412 (28%), Positives = 202/412 (49%), Gaps = 38/412 (9%)
Query: 291 KNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLL-PSCSKFGTLLEGKC 349
K +N +I Y G + S M ++ P+ +T +L+ +CS F ++ G
Sbjct: 49 KTKCVYNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSF-SVSYGVA 107
Query: 350 IHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAE---------CV--------------- 385
+HG A+++ FL ++T+ V YG+ G L+ + CV
Sbjct: 108 LHGQALKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGE 167
Query: 386 -------FGRINEKNMVSWNAIIAAYVQNGRNEEALELF-HCLRNQ--TLKPDAVTIASI 435
F R+ ++VSW +I + + G + +AL +F ++N+ + P+ T S+
Sbjct: 168 MDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSV 227
Query: 436 LPAYAEL--ATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFK 493
L + A + KQIH Y+ E+ T A++ MY K GDL+ A FD + K
Sbjct: 228 LSSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDK 287
Query: 494 NLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELF 553
+ +WN +I A A +G ++++F MK + + PN T +++L++C+ S LV+ G +LF
Sbjct: 288 KVCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLF 347
Query: 554 NSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTASRNNND 613
+S+ +Y I EHYGC+VDL+GR G L A FI+ +P P A + G+LL A + + +
Sbjct: 348 SSICSEYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGACKIHEN 407
Query: 614 IFFAEFAAKHILSHDNDNTGCYVLLANMYAEAGRWEDVEQIKLVMKKKGLAK 665
K ++ + G YV L+ A W + E+++ M + G+ K
Sbjct: 408 TELGNTVGKQLIGLQPQHCGQYVALSTFNALDSNWSEAEKMRKAMIEAGIRK 459
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 157/336 (46%), Gaps = 37/336 (11%)
Query: 195 WNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVI 254
+N ++ Y G+ SL F ML +P+ L+ S + V G +H Q +
Sbjct: 54 YNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQAL 113
Query: 255 RNGLELDIMVQTSLIDMYAKC-------------------------------GKVDYAER 283
+ G D VQTS + Y + G++DYA
Sbjct: 114 KRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFE 173
Query: 284 VFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDN---LIPDAITMINLLPSCSK 340
F M ++V+W +I G++ G ++ M ++ + P+ T +++L SC+
Sbjct: 174 YFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCAN 233
Query: 341 F--GTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWN 398
F G + GK IHGY + K + L TAL+DMYGK G L+ A +F +I +K + +WN
Sbjct: 234 FDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWN 293
Query: 399 AIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYI-TK 457
AII+A NGR ++ALE+F +++ + P+ +T+ +IL A A V Q+ + I ++
Sbjct: 294 AIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSICSE 353
Query: 458 LELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFK 493
++ + +V + + G L A + S+ F+
Sbjct: 354 YKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFE 389
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 89/329 (27%), Positives = 153/329 (46%), Gaps = 47/329 (14%)
Query: 93 IWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKL 152
++N +IR + G ++ + + M + +N TFP +IKA S G +HG+
Sbjct: 53 VYNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQA 112
Query: 153 IKIGLDRDIYV-------------------------------CNSLIDMYFKFGFVEVAE 181
+K G D +V CNSL+D + G ++ A
Sbjct: 113 LKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAF 172
Query: 182 KVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEK----PDRLSMISSLGGC 237
+ F+ MP+ D+VSW ++NG+ G K+LM F EM+ E+ P+ + +S L C
Sbjct: 173 EYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQ-NERAVITPNEATFVSVLSSC 231
Query: 238 S--IGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVA 295
+ +R GK+IH V+ + L + T+L+DMY K G ++ A +F+++ K + A
Sbjct: 232 ANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCA 291
Query: 296 WNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSK-----FGTLLEGKCI 350
WNA+I A NG ++ + M+ + P+ IT++ +L +C++ G L
Sbjct: 292 WNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSIC 351
Query: 351 HGYAIRKMFLPHLVLETALVDMYGKCGQL 379
Y I +P +VD+ G+ G L
Sbjct: 352 SEYKI----IPTSEHYGCVVDLIGRAGLL 376
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 83/171 (48%), Gaps = 5/171 (2%)
Query: 73 SGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRM---EYEGIGIDNFTF 129
+G MD A F++M D W +I GFS KGL + + + M E I + TF
Sbjct: 165 NGEMDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATF 224
Query: 130 PFVIKACGRLLS--FIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAM 187
V+ +C GK++HG ++ + + +L+DMY K G +E+A +F+ +
Sbjct: 225 VSVLSSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQI 284
Query: 188 PLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCS 238
+ + +WN +++ G ++L F+ M P+ +++++ L C+
Sbjct: 285 RDKKVCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACA 335
>AT2G25580.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 21 plant
structures; EXPRESSED DURING: 12 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT4G32450.1); Has 7881 Blast hits to 3723
proteins in 97 species: Archae - 0; Bacteria - 6;
Metazoa - 6; Fungi - 16; Plants - 7829; Viruses - 0;
Other Eukaryotes - 24 (source: NCBI BLink). |
chr2:10888102-10889949 FORWARD
Length = 615
Score = 166 bits (421), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 115/408 (28%), Positives = 199/408 (48%), Gaps = 29/408 (7%)
Query: 403 AYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIH----AYITKL 458
A+ ++G+ ++AL L + D + + E + E K +H A ++ L
Sbjct: 228 AFCKHGKVKKALYTIDILASMNYVVDLSRLLRLAKICGEAEGLQEAKTVHGKISASVSHL 287
Query: 459 ELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLF 518
+LSSN + ++ MY+ CG A F+ MS KNL +W +I +A +GFG +I +F
Sbjct: 288 DLSSN----HVLLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMF 343
Query: 519 SRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGR 578
SR K+ G P+ F + +C + G V+EG F SM DY I IE Y +V++
Sbjct: 344 SRFKEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESMSRDYGIAPSIEDYVSLVEMYAL 403
Query: 579 TGNLDAAKQFIEEMPLVPTARIWGSLLTASRNNNDIFFAEFAAKHILSHDNDNTGCYVLL 638
G LD A +F+E MP+ P +W +L+ SR + ++ ++ A+ + D
Sbjct: 404 PGFLDEALEFVERMPMEPNVDVWETLMNLSRVHGNLELGDYCAEVVEFLDPTRL------ 457
Query: 639 ANMYAEAG----RWEDVEQIKLVMKKKGLAKTVDCCTVESKGKSQKFINNNKSHQQAYMI 694
N + G + DVE+ L K+ G+ V E + N+ + + +
Sbjct: 458 -NKQSREGFIPVKASDVEKESL-KKRSGILHGVKSSMQEFRAGDTNLPEND----ELFQL 511
Query: 695 YDVLDIILKKIGEDVYIHSLSKFRPADVIKKKMKS-PQNHSVKLAICFGLISTAIGKPII 753
L + + ++G Y+ + ++ D+ ++ ++ HS ++A ++++A KP
Sbjct: 512 LRNLKMHMVEVG---YV-AETRMALHDIDQESKETLLLGHSERIAFARAVLNSAPRKPFT 567
Query: 754 IRKNTRICKDCHIAAKKISRVTKREIIVGDSKIFHHFEDGRCSCGDYW 801
+ KN R+C DCH A K +S + RE+I D K FH ++G C+C DYW
Sbjct: 568 VIKNLRVCVDCHNALKIMSDIVGREVITRDIKRFHQMKNGACTCKDYW 615
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 69/140 (49%), Gaps = 2/140 (1%)
Query: 70 FVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTF 129
+ + G + A +FEKM++ + W +IIR F+ G ++ ID + R + EG D F
Sbjct: 299 YSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLF 358
Query: 130 PFVIKACGRLLSFIEGKKVHGKLIK-IGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMP 188
+ ACG L EG + + G+ I SL++MY GF++ A + E MP
Sbjct: 359 RGIFYACGMLGDVDEGLLHFESMSRDYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMP 418
Query: 189 LRDLVS-WNCMVNGYRVIGD 207
+ V W ++N RV G+
Sbjct: 419 MEPNVDVWETLMNLSRVHGN 438
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 78/168 (46%), Gaps = 4/168 (2%)
Query: 237 CSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAW 296
C ++ K +H ++ + LD+ L++MY+ CG + A VF +M+ KN+ W
Sbjct: 264 CGEAEGLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLETW 323
Query: 297 NAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIR 356
+I +A NG ++ R +E+ IPD + +C G + EG +H ++
Sbjct: 324 CIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDEG-LLHFESMS 382
Query: 357 KMF--LPHLVLETALVDMYGKCGQLKFA-ECVFGRINEKNMVSWNAII 401
+ + P + +LV+MY G L A E V E N+ W ++
Sbjct: 383 RDYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLM 430
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 73/179 (40%), Gaps = 4/179 (2%)
Query: 134 KACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLV 193
K CG E K VHGK+ D+ + L++MY G A VFE M ++L
Sbjct: 262 KICGEAEGLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLE 321
Query: 194 SWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQV 253
+W ++ + G G ++ F G PD C + V G +H +
Sbjct: 322 TWCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGL-LHFES 380
Query: 254 IRN--GLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCK-NIVAWNAMIGGYAINGHF 309
+ G+ I SL++MYA G +D A M + N+ W ++ ++G+
Sbjct: 381 MSRDYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLMNLSRVHGNL 439
>AT4G32450.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:15661092-15662705 FORWARD
Length = 537
Score = 165 bits (417), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 118/401 (29%), Positives = 192/401 (47%), Gaps = 26/401 (6%)
Query: 406 QNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTF 465
+ G+ ++A+E+ RN+ D + I + + E K +H +IT S+
Sbjct: 158 REGKVKKAVEIIKSWRNEGYVVDLPRLFWIAQLCGDAQALQEAKVVHEFITSSVGISDIS 217
Query: 466 TSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNG 525
N+I+ MY+ CG ++ A F+SM +NL +W +I +A +G G +I FSR KQ G
Sbjct: 218 AYNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFKQEG 277
Query: 526 IEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAA 585
+P+ F + +C + G +NEG F SM +Y I +EHY +V +L G LD A
Sbjct: 278 NKPDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVSLVKMLAEPGYLDEA 337
Query: 586 KQFIEEMPLVPTARIWGSLLTASRNNNDIFFAEFAAKHILSHDNDNTGCYVLLANMYAEA 645
+F+E M P +W +L+ SR + D+ + + D N ++A
Sbjct: 338 LRFVESME--PNVDLWETLMNLSRVHGDLILGDRCQDMVEQLDASRL-------NKESKA 388
Query: 646 G----RWEDVEQIKLVMKKKGLAKTVDCCTVESKGKSQKFINNNKSHQQAYMIYDVLDII 701
G + D+ + KL KG + + + +++ YM L
Sbjct: 389 GLVPVKSSDLVKEKLQRMAKGPNYGIRYMAAGDISRPE--------NRELYMALKSLKEH 440
Query: 702 LKKIGEDVYIHSLSKFRPADVIKK-KMKSPQNHSVKLAICFGLISTAIGKPIIIRKNTRI 760
+ +IG Y+ LSK DV ++ K ++ NH+ + A + T I + KN R+
Sbjct: 441 MIEIG---YV-PLSKLALHDVDQESKDENLFNHNERFAFISTFLDTPARSLIRVMKNLRV 496
Query: 761 CKDCHIAAKKISRVTKREIIVGDSKIFHHFEDGRCSCGDYW 801
C DCH A K +S++ RE+I D+K FHH +DG CSC +YW
Sbjct: 497 CADCHNALKLMSKIVGRELISRDAKRFHHMKDGVCSCREYW 537
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 91/204 (44%), Gaps = 2/204 (0%)
Query: 307 GHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLE 366
G ++ +K + + + D + + C L E K +H + + + +
Sbjct: 160 GKVKKAVEIIKSWRNEGYVVDLPRLFWIAQLCGDAQALQEAKVVHEFITSSVGISDISAY 219
Query: 367 TALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLK 426
++++MY CG ++ A VF + E+N+ +W +I + +NG+ E+A++ F + + K
Sbjct: 220 NSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFKQEGNK 279
Query: 427 PDAVTIASILPAYAELATVSE-CKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARR 485
PD I A L ++E + + + ++V M A+ G L A R
Sbjct: 280 PDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVSLVKMLAEPGYLDEALR 339
Query: 486 YFDSMSFKNLVSWNTMIMAYAIHG 509
+ +SM N+ W T++ +HG
Sbjct: 340 FVESME-PNVDLWETLMNLSRVHG 362
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 88/219 (40%), Gaps = 2/219 (0%)
Query: 104 KGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYV 163
+G ++ ++ EG +D ++ + CG + E K VH + DI
Sbjct: 159 EGKVKKAVEIIKSWRNEGYVVDLPRLFWIAQLCGDAQALQEAKVVHEFITSSVGISDISA 218
Query: 164 CNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGE 223
NS+I+MY G VE A VF +MP R+L +W ++ + G G ++ F G
Sbjct: 219 YNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFKQEGN 278
Query: 224 KPDRLSMISSLGGCSI-GCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAE 282
KPD C + G G G+ + SL+ M A+ G +D A
Sbjct: 279 KPDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVSLVKMLAEPGYLDEAL 338
Query: 283 RVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQE 321
R M N+ W ++ ++G + C +++
Sbjct: 339 RFVESME-PNVDLWETLMNLSRVHGDLILGDRCQDMVEQ 376
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 69/147 (46%), Gaps = 12/147 (8%)
Query: 261 DIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQ 320
DI S+I+MY+ CG V+ A VFN M +N+ W +I +A NG ++ R +
Sbjct: 215 DISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFK 274
Query: 321 EDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMF--LPHLVLETALVDMYGKCG- 377
++ PD + +C G + EG +H ++ K + +P + +LV M + G
Sbjct: 275 QEGNKPDGEMFKEIFFACGVLGDMNEG-LLHFESMYKEYGIIPCMEHYVSLVKMLAEPGY 333
Query: 378 ---QLKFAECVFGRINEKNMVSWNAII 401
L+F E + E N+ W ++
Sbjct: 334 LDEALRFVESM-----EPNVDLWETLM 355
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 67/139 (48%), Gaps = 10/139 (7%)
Query: 74 GAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVI 133
G++++AL +F M + + W +IR F+ G ++ ID + R + EG D F +
Sbjct: 230 GSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFKQEGNKPDGEMFKEIF 289
Query: 134 KACGRLLSFIEGKKVHGKLIKIGLDRDIYVCN----SLIDMYFKFGFVEVAEKVFEAM-P 188
ACG L EG + K + I C SL+ M + G+++ A + E+M P
Sbjct: 290 FACGVLGDMNEGLLHFESMYK---EYGIIPCMEHYVSLVKMLAEPGYLDEALRFVESMEP 346
Query: 189 LRDLVSWNCMVNGYRVIGD 207
DL W ++N RV GD
Sbjct: 347 NVDL--WETLMNLSRVHGD 363
>AT1G29710.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:10387673-10389100 FORWARD
Length = 475
Score = 158 bits (400), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 103/400 (25%), Positives = 183/400 (45%), Gaps = 26/400 (6%)
Query: 407 NGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFT 466
G EA+E+ L N+ D + + + + + + +H I L +
Sbjct: 97 QGNWREAVEVLDYLENKGYAMDLIRLLGLAKLCGKPEALEAARVVHECIIALVSPCDVGA 156
Query: 467 SNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGI 526
NAI+ MY+ C + A + F+ M N + M+ + +G+G +I LF+R K+ G
Sbjct: 157 RNAIIEMYSGCCSVDDALKVFEEMPEWNSGTLCVMMRCFVNNGYGEEAIDLFTRFKEEGN 216
Query: 527 EPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAK 586
+PN F + S+C+++G V EG F +M +Y I +EHY + +L +G+LD A
Sbjct: 217 KPNGEIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYHSVTKMLATSGHLDEAL 276
Query: 587 QFIEEMPLVPTARIWGSLLTASRNNNDIFFAEFAAKHILSHDNDNTGCYVLLANMYAEAG 646
F+E MP+ P+ +W +L+ SR + D+ + A+ + D A
Sbjct: 277 NFVERMPMEPSVDVWETLMNLSRVHGDVELGDRCAELVEKLD----------------AT 320
Query: 647 RWEDVEQIKLVMKKKGLAKTVDCCTVESKGKSQKFINN-----NKSHQQAYMIYDVLDII 701
R + V LV K D E +S+ + + + SH Q +IY+ L +
Sbjct: 321 RLDKVSSAGLVATKAS-----DFVKKEPSTRSEPYFYSTFRPVDSSHPQMNIIYETLMSL 375
Query: 702 LKKIGEDVYIHSLSKFRPADVIKKKMKSPQNHSVKLAICFGLISTAIGKPIIIRKNTRIC 761
++ E Y+ +R + + + + ++A+ L+ + I + N RI
Sbjct: 376 RSQLKEMGYVPDTRYYRSLIMAMENKEQIFGYREEIAVVESLLKSKPRSAITLLTNIRIV 435
Query: 762 KDCHIAAKKISRVTKREIIVGDSKIFHHFEDGRCSCGDYW 801
DCH K +S +T R++I D+KI+H F++G C C + W
Sbjct: 436 GDCHDMMKLMSVITGRDMIKRDAKIYHLFKNGVCRCNNLW 475
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 75/334 (22%), Positives = 131/334 (39%), Gaps = 22/334 (6%)
Query: 294 VAWNAMIGGY---AINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCI 350
VA N I + I G++ E+ L ++ D I ++ L C K L + +
Sbjct: 82 VAQNVTIETFDSLCIQGNWREAVEVLDYLENKGYAMDLIRLLGLAKLCGKPEALEAARVV 141
Query: 351 HGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRN 410
H I + + A+++MY C + A VF + E N + ++ +V NG
Sbjct: 142 HECIIALVSPCDVGARNAIIEMYSGCCSVDDALKVFEEMPEWNSGTLCVMMRCFVNNGYG 201
Query: 411 EEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECK-QIHAYITKLELSSNTFTSNA 469
EEA++LF + + KP+ + V E Q A + + + ++
Sbjct: 202 EEAIDLFTRFKEEGNKPNGEIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYHS 261
Query: 470 IVYMYAKCGDLQTARRYFDSMSFKNLVS-WNTMIMAYAIHGFGTISIQLFSRMKQNGIEP 528
+ M A G L A + + M + V W T++ +HG ++L R E
Sbjct: 262 VTKMLATSGHLDEALNFVERMPMEPSVDVWETLMNLSRVHG----DVELGDRCA----EL 313
Query: 529 NESTFVSLLSSCSISGLVNEGWELF-------NSMKMDYNIDYGIEHYGCMVDLLGRTGN 581
E + L S +GLV F S Y+ ++ ++++ T
Sbjct: 314 VEKLDATRLDKVSSAGLVATKASDFVKKEPSTRSEPYFYSTFRPVDSSHPQMNIIYET-- 371
Query: 582 LDAAKQFIEEMPLVPTARIWGSLLTASRNNNDIF 615
L + + ++EM VP R + SL+ A N IF
Sbjct: 372 LMSLRSQLKEMGYVPDTRYYRSLIMAMENKEQIF 405
>AT5G02860.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:654102-656561 FORWARD
Length = 819
Score = 135 bits (339), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 124/588 (21%), Positives = 243/588 (41%), Gaps = 59/588 (10%)
Query: 62 SLTRSLCEFVDSGAMDNALYLFEKMNQ----PDTYIWNVIIRGFSNKGL-FQEVIDFYHR 116
S T + F +SG A+ +F+KM + P +NVI+ F G + ++ +
Sbjct: 210 SYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEK 269
Query: 117 MEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGF 176
M+ +GI D +T+ +I C R E +V ++ G D N+L+D+Y K
Sbjct: 270 MKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHR 329
Query: 177 VEVAEKVFEAMPLR----DLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMIS 232
+ A KV M L +V++N +++ Y G +++ +M G KPD + +
Sbjct: 330 PKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTT 389
Query: 233 SLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMT--- 289
L G V I ++ G + +I + I MY GK ++F+E+
Sbjct: 390 LLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCG 449
Query: 290 -CKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGK 348
+IV WN ++ + NG E K M+ +P+ T L+ + S+ G+ +
Sbjct: 450 LSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAM 509
Query: 349 CIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINE----KNMVSWNAIIAAY 404
++ + P L ++ + G + +E V + + N +++ +++ AY
Sbjct: 510 TVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAY 569
Query: 405 VQNGRN------------------------------------EEALELFHCLRNQTLKPD 428
NG+ EA F L+ + PD
Sbjct: 570 A-NGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPD 628
Query: 429 AVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFD 488
T+ S++ Y V++ + Y+ + + + T N+++YM+++ D +
Sbjct: 629 ITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILR 688
Query: 489 SMSFK----NLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISG 544
+ K +++S+NT+I AY + + ++FS M+ +GI P+ T+ + + S +
Sbjct: 689 EILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADS 748
Query: 545 LVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEM 592
+ E + M + + Y +VD + D AK F+E++
Sbjct: 749 MFEEAIGVVRYM-IKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDL 795
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 117/526 (22%), Positives = 220/526 (41%), Gaps = 30/526 (5%)
Query: 90 DTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRL-------LSF 142
D Y + +I F+N G ++E ++ + +ME +G T+ ++ G++ S
Sbjct: 207 DVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSL 266
Query: 143 IEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLR----DLVSWNCM 198
+E K+ G+ D Y N+LI + + A +VFE M D V++N +
Sbjct: 267 VE------KMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNAL 320
Query: 199 VNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGL 258
++ Y +++ EM+ G P ++ S + + + E+ Q+ G
Sbjct: 321 LDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGT 380
Query: 259 ELDIMVQTSLIDMYAKCGKVDYAERVFNEMT---CK-NIVAWNAMIGGYAINGHFLESFT 314
+ D+ T+L+ + + GKV+ A +F EM CK NI +NA I Y G F E
Sbjct: 381 KPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMK 440
Query: 315 CLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYG 374
+ L PD +T LL + G E + R F+P L+ Y
Sbjct: 441 IFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYS 500
Query: 375 KCGQLKFAECVFGRINE----KNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAV 430
+CG + A V+ R+ + ++ ++N ++AA + G E++ ++ + + KP+ +
Sbjct: 501 RCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNEL 560
Query: 431 TIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSM 490
T S+L AYA + + + + +V + +KC L A R F +
Sbjct: 561 TYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSEL 620
Query: 491 SFK----NLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLV 546
+ ++ + N+M+ Y + + MK+ G P+ +T+ SL+ S S
Sbjct: 621 KERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADF 680
Query: 547 NEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEM 592
+ E+ + + I I Y ++ R + A + EM
Sbjct: 681 GKSEEILREI-LAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEM 725
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 102/388 (26%), Positives = 176/388 (45%), Gaps = 19/388 (4%)
Query: 256 NGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMT---CK-NIVAWNAMIGGYAINGHFLE 311
+G LD+ TSLI +A G+ A VF +M CK ++ +N ++ + G
Sbjct: 202 DGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWN 261
Query: 312 SFTCL-KRMQEDNLIPDAITMINLLPSCSKFGTL-LEGKCIHGYAIRKMFLPHLVLETAL 369
T L ++M+ D + PDA T N L +C K G+L E + F V AL
Sbjct: 262 KITSLVEKMKSDGIAPDAYT-YNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNAL 320
Query: 370 VDMYGKCGQLKFAECVFGRIN----EKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTL 425
+D+YGK + K A V + ++V++N++I+AY ++G +EA+EL + + +
Sbjct: 321 LDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGT 380
Query: 426 KPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARR 485
KPD T ++L + V I + N T NA + MY G +
Sbjct: 381 KPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMK 440
Query: 486 YFDSMSF----KNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCS 541
FD ++ ++V+WNT++ + +G + +F MK+ G P TF +L+S+ S
Sbjct: 441 IFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYS 500
Query: 542 ISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMP---LVPTA 598
G + ++ M +D + + Y ++ L R G + +++ + EM P
Sbjct: 501 RCGSFEQAMTVYRRM-LDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNE 559
Query: 599 RIWGSLLTASRNNNDIFFAEFAAKHILS 626
+ SLL A N +I A+ + S
Sbjct: 560 LTYCSLLHAYANGKEIGLMHSLAEEVYS 587
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 91/449 (20%), Positives = 187/449 (41%), Gaps = 16/449 (3%)
Query: 58 PNSLSLTRSLCEFVDSGAMDNALYL----FEKMNQPDTYIWNVIIRGFSNKGLFQEVIDF 113
P+ ++ + + G +D A+ L EK +PD + + ++ GF G + +
Sbjct: 347 PSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSI 406
Query: 114 YHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFK 173
+ M G + TF IK G F E K+ ++ GL DI N+L+ ++ +
Sbjct: 407 FEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQ 466
Query: 174 FGFVEVAEKVFEAMPLRDLV----SWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLS 229
G VF+ M V ++N +++ Y G +++ ++ ML G PD +
Sbjct: 467 NGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLST 526
Query: 230 MISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKV----DYAERVF 285
+ L + G +++ ++ + + + SL+ YA ++ AE V+
Sbjct: 527 YNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVY 586
Query: 286 NEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLL 345
+ + V ++ + E+ ++E PD T+ +++ + +
Sbjct: 587 SGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVA 646
Query: 346 EGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEK----NMVSWNAII 401
+ + Y + F P + +L+ M+ + +E + I K +++S+N +I
Sbjct: 647 KANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVI 706
Query: 402 AAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELS 461
AY +N R +A +F +RN + PD +T + + +YA + E + Y+ K
Sbjct: 707 YAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCR 766
Query: 462 SNTFTSNAIVYMYAKCGDLQTARRYFDSM 490
N T N+IV Y K A+ + + +
Sbjct: 767 PNQNTYNSIVDGYCKLNRKDEAKLFVEDL 795
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 102/484 (21%), Positives = 195/484 (40%), Gaps = 70/484 (14%)
Query: 2 AVKLSHSYFFNSYKPDDASFKQM-GAPKRDLLVNPRIRKSNPTKKQMSETPKRGMIKPNS 60
A+K+ + N + P ++ + A RD +++ + K QM+E +G KP+
Sbjct: 333 AMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAME----LKNQMAE---KG-TKPDV 384
Query: 61 LSLTRSLCEFVDSGAMDNALYLFEKMN----QPDTYIWNVIIRGFSNKGLFQEVIDFYHR 116
+ T L F +G +++A+ +FE+M +P+ +N I+ + N+G F E++ +
Sbjct: 385 FTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDE 444
Query: 117 MEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGF 176
+ G+ D T+ ++ G+ E V ++ + G + N+LI Y + G
Sbjct: 445 INVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGS 504
Query: 177 VEVAEKVFEAM----PLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMIS 232
E A V+ M DL ++N ++ G +S EM KP+ L+ S
Sbjct: 505 FEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCS 564
Query: 233 SL----GGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEM 288
L G IG +E++ VI E ++ +L+ + +KC + AER F+E+
Sbjct: 565 LLHAYANGKEIGLMHSLAEEVYSGVI----EPRAVLLKTLVLVCSKCDLLPEAERAFSEL 620
Query: 289 TCK----NIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTL 344
+ +I N+M+ Y ++ L M+E P T +L+ S+
Sbjct: 621 KERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADF 680
Query: 345 LEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMV--------- 395
+ + I + K P ++ ++ Y + +++ A +F + +V
Sbjct: 681 GKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTF 740
Query: 396 ------------------------------SWNAIIAAYVQNGRNEEALELFHCLRNQTL 425
++N+I+ Y + R +EA LRN L
Sbjct: 741 IGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLRN--L 798
Query: 426 KPDA 429
P A
Sbjct: 799 DPHA 802
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/267 (20%), Positives = 99/267 (37%), Gaps = 35/267 (13%)
Query: 400 IIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLE 459
II+ + GR A +F+ L+ D + S++ A+A E + + +
Sbjct: 179 IISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDG 238
Query: 460 LSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFS 519
T N I+ ++ K G WN + L
Sbjct: 239 CKPTLITYNVILNVFGKMG-----------------TPWNKI-------------TSLVE 268
Query: 520 RMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRT 579
+MK +GI P+ T+ +L++ C L E ++F MK Y Y ++D+ G++
Sbjct: 269 KMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKA-AGFSYDKVTYNALLDVYGKS 327
Query: 580 GNLDAAKQFIEEMPL---VPTARIWGSLLTASRNNNDIFFA-EFAAKHILSHDNDNTGCY 635
A + + EM L P+ + SL++A + + A E + + Y
Sbjct: 328 HRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTY 387
Query: 636 VLLANMYAEAGRWEDVEQIKLVMKKKG 662
L + + AG+ E I M+ G
Sbjct: 388 TTLLSGFERAGKVESAMSIFEEMRNAG 414
>AT2G34370.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:14510482-14511891 FORWARD
Length = 469
Score = 132 bits (332), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 103/401 (25%), Positives = 180/401 (44%), Gaps = 37/401 (9%)
Query: 412 EALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIV 471
EALE+ L ++ D + + E+ + E + +H IT L+ S + ++
Sbjct: 95 EALEVIDILEDKGYIVDFPRLLGLAKLCGEVEALEEARVVHDCITPLDARS----YHTVI 150
Query: 472 YMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNES 531
MY+ C A F+ M +N +W TMI A +G G +I +F+R + G +P++
Sbjct: 151 EMYSGCRSTDDALNVFNEMPKRNSETWGTMIRCLAKNGEGERAIDMFTRFIEEGNKPDKE 210
Query: 532 TFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEE 591
F ++ +C G +NEG F SM DY + +E Y ++++L G+LD A F+E
Sbjct: 211 IFKAVFFACVSIGDINEGLLHFESMYRDYGMVLSMEDYVNVIEMLAACGHLDEALDFVER 270
Query: 592 MPLVPTARIWGSLLTASRNNNDI----FFAEFAAKHILSHDNDNTGCYVLLANMYAEAGR 647
M + P+ +W +L+ + FAE K S + + ++ A A
Sbjct: 271 MTVEPSVEMWETLMNLCWVQGYLELGDRFAELIKKLDASRMSKESNAGLVAAK--ASDSA 328
Query: 648 WEDVEQIKLVMKKKGLAKTVDCCTVESKGKSQKFINNNKSHQQAYMIYDVLDIILKKIGE 707
E +++++ + + K + +F + SH + L + + IG
Sbjct: 329 MEKLKELRYCQMIRD----------DPKKRMHEFRAGDTSHLGTVSAFRSLKVQMLDIG- 377
Query: 708 DVYIHSLSKFRPAD-----VIKKKMKSPQ--NHSVKLAICFGLISTAIGKPIIIRKNTRI 760
F PA ++++ K Q S KLA +I++ +P+ + +N R
Sbjct: 378 ---------FVPATRVCFVTVEEEEKEEQLLFRSNKLAFAHAIINSEARRPLTVLQNMRT 428
Query: 761 CKDCHIAAKKISRVTKREIIVGDSKIFHHFEDGRCSCGDYW 801
C D H K IS +T R +I D K +H +++G CSC DYW
Sbjct: 429 CIDGHNTFKMISLITGRALIQRDKKKYHFYKNGVCSCKDYW 469
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 90/206 (43%), Gaps = 15/206 (7%)
Query: 109 EVIDFYHRMEYEGIGIDNFTFPFVI---KACGRLLSFIEGKKVHGKLIKIGLDRDIYVCN 165
EVID +E +G +D FP ++ K CG + + E + VH + + D +
Sbjct: 98 EVIDI---LEDKGYIVD---FPRLLGLAKLCGEVEALEEARVVHDCITPL----DARSYH 147
Query: 166 SLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKP 225
++I+MY + A VF MP R+ +W M+ G+G +++ F + G KP
Sbjct: 148 TVIEMYSGCRSTDDALNVFNEMPKRNSETWGTMIRCLAKNGEGERAIDMFTRFIEEGNKP 207
Query: 226 DRLSMISSLGGC-SIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERV 284
D+ + C SIG G G+ L + ++I+M A CG +D A
Sbjct: 208 DKEIFKAVFFACVSIGDINEGLLHFESMYRDYGMVLSMEDYVNVIEMLAACGHLDEALDF 267
Query: 285 FNEMTCK-NIVAWNAMIGGYAINGHF 309
MT + ++ W ++ + G+
Sbjct: 268 VERMTVEPSVEMWETLMNLCWVQGYL 293
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/249 (20%), Positives = 99/249 (39%), Gaps = 26/249 (10%)
Query: 272 YAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITM 331
+ +C +V ++ N I ++A+ I E+ + +++ I D +
Sbjct: 60 FVQCRRVSSYAQMVNNHQSVTIETFDALCKQVKIR----EALEVIDILEDKGYIVDFPRL 115
Query: 332 INLLPSCSKFGTLLEGKCIHGYAIRKMFLP------HLVLETALVDMYGKCGQLKFAECV 385
+ L C + L E + +H P H V+E MY C A V
Sbjct: 116 LGLAKLCGEVEALEEARVVHD-----CITPLDARSYHTVIE-----MYSGCRSTDDALNV 165
Query: 386 FGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATV 445
F + ++N +W +I +NG E A+++F + KPD ++ A + +
Sbjct: 166 FNEMPKRNSETWGTMIRCLAKNGEGERAIDMFTRFIEEGNKPDKEIFKAVFFACVSIGDI 225
Query: 446 SECKQIHAYITK---LELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVS-WNTM 501
+E + + + LS + + ++ M A CG L A + + M+ + V W T+
Sbjct: 226 NEGLLHFESMYRDYGMVLSMEDYVN--VIEMLAACGHLDEALDFVERMTVEPSVEMWETL 283
Query: 502 IMAYAIHGF 510
+ + G+
Sbjct: 284 MNLCWVQGY 292
>AT1G62910.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23299060-23303162 FORWARD
Length = 1133
Score = 124 bits (311), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 110/558 (19%), Positives = 248/558 (44%), Gaps = 53/558 (9%)
Query: 76 MDNALYLFEKMNQ----PDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPF 131
+D+A+ LF M + P +N ++ + F+ VI +M+ GI D +T+
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 132 VIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRD 191
I R V K++K+G + DI +SL++ Y ++++ +A+ L D
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCH------SKRISDAVALVD 177
Query: 192 LVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHC 251
+M+ +G KPD + + + G + +
Sbjct: 178 -------------------------QMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVD 212
Query: 252 QVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTC----KNIVAWNAMIGGYAING 307
Q+++ G + D++ ++++ K G +D A + +M ++V +N +I G
Sbjct: 213 QMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYK 272
Query: 308 HFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLET 367
H ++ M + PD T +L+ +G + + I + P++V +
Sbjct: 273 HMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFS 332
Query: 368 ALVDMYGKCGQLKFAECVFG----RINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQ 423
AL+D + K G+L AE ++ R + ++ +++++I + + R +EA +F + ++
Sbjct: 333 ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK 392
Query: 424 TLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTA 483
P+ VT ++++ + + V E ++ +++ L NT T +++ + + D A
Sbjct: 393 DCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNA 452
Query: 484 RRYFDSM----SFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSS 539
+ F M N++++N ++ +G ++ +F ++++ +EP+ T+ ++
Sbjct: 453 QMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEG 512
Query: 540 CSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEM----PLV 595
+G V +GWELF ++ + + + Y M+ R G+ + A +++M PL
Sbjct: 513 MCKAGKVEDGWELFCNLSLK-GVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPL- 570
Query: 596 PTARIWGSLLTASRNNND 613
P + + +L+ A + D
Sbjct: 571 PNSGTYNTLIRARLRDGD 588
Score = 99.4 bits (246), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 93/474 (19%), Positives = 207/474 (43%), Gaps = 47/474 (9%)
Query: 76 MDNALYLFEKMNQ----PDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPF 131
+D+A+ LF M Q P ++ ++ + F VI F +ME GI + +T+
Sbjct: 664 LDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNI 723
Query: 132 VIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRD 191
+I R + GK++K+G + DI NSL++ GF ++ +A+ L D
Sbjct: 724 LINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLN-----GFCH-GNRISDAVALVD 777
Query: 192 LVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHC 251
+M+ +G KPD ++ + + G + +
Sbjct: 778 -------------------------QMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALID 812
Query: 252 QVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTC----KNIVAWNAMIGGYAING 307
++++ G + D++ ++++ K G D A + N+M N+V ++ +I
Sbjct: 813 RMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYR 872
Query: 308 HFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLET 367
H ++ M+ + P+ IT +L+ +G + + I + P+LV +
Sbjct: 873 HEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFS 932
Query: 368 ALVDMYGKCGQL----KFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQ 423
AL+D + K G+L K E + R + N+ +++++I + R EA ++ + +
Sbjct: 933 ALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRK 992
Query: 424 TLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTA 483
P+ VT +++ + + V + ++ +++ L NT T +++ + + D A
Sbjct: 993 DCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNA 1052
Query: 484 RRYFDSM----SFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTF 533
+ F M N++++N ++ +G ++ +F ++++ +EP+ T+
Sbjct: 1053 QMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTY 1106
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 96/448 (21%), Positives = 201/448 (44%), Gaps = 23/448 (5%)
Query: 2 AVKLSHSYFFNSYKPDDASFKQMGAPKRDLLVNPRIRKSNPTKKQMSETPKRGMIKPNSL 61
AV L YKPD +F + L ++ + ++ QM + RG +P+ +
Sbjct: 172 AVALVDQMVEMGYKPDTFTFTTL---IHGLFLHNKASEAVALVDQMVQ---RG-CQPDLV 224
Query: 62 SLTRSLCEFVDSGAMDNALYLFEKMN----QPDTYIWNVIIRGFSNKGLFQEVIDFYHRM 117
+ + G +D AL L +KM + D I+N II G + ++ + M
Sbjct: 225 TYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEM 284
Query: 118 EYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFV 177
+ +GI D FT+ +I + + ++ +I+ ++ ++ ++LID + K G +
Sbjct: 285 DNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKL 344
Query: 178 EVAEKVFEAMPLR----DLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISS 233
AEK+++ M R D+ +++ ++NG+ + ++ F+ M+ P+ ++ +
Sbjct: 345 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTL 404
Query: 234 LGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTC--- 290
+ G V G E+ ++ + GL + + T+LI + + D A+ VF +M
Sbjct: 405 IKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGV 464
Query: 291 -KNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKC 349
NI+ +N ++ G NG ++ + +Q + PD T ++ K G + +G
Sbjct: 465 HPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWE 524
Query: 350 IHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEK----NMVSWNAIIAAYV 405
+ K P+++ ++ + + G + A+ + ++ E N ++N +I A +
Sbjct: 525 LFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARL 584
Query: 406 QNGRNEEALELFHCLRNQTLKPDAVTIA 433
++G E + EL +R+ DA TI
Sbjct: 585 RDGDREASAELIKEMRSCGFAGDASTIG 612
>AT1G62930.1 | Symbols: | INVOLVED IN: biological_process unknown;
EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14
growth stages; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT1G63130.1); Has
29147 Blast hits to 6292 proteins in 192 species: Archae
- 8; Bacteria - 22; Metazoa - 1258; Fungi - 858; Plants
- 25291; Viruses - 0; Other Eukaryotes - 1710 (source:
NCBI BLink). | chr1:23306534-23308423 FORWARD
Length = 629
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 119/547 (21%), Positives = 235/547 (42%), Gaps = 75/547 (13%)
Query: 76 MDNALYLFEKMNQ----PDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPF 131
+D+A+ LF +M Q P +N ++ + F VI RM+ I D +++
Sbjct: 61 LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 120
Query: 132 VIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRD 191
+I R V GK++K+G + DI +SL++ Y +++ EA+ L D
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCH------GKRISEAVALVD 174
Query: 192 ----------LVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGC 241
V++N +++G + +++ M+ G +PD + + G G
Sbjct: 175 QMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPD----LFTYGTVVNGL 230
Query: 242 CVRGGKEIHCQVIRN----GLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCK----NI 293
C RG ++ +++ +E D+++ T++ID V+ A +F EM K N+
Sbjct: 231 CKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNV 290
Query: 294 VAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGY 353
V +N++I G + ++ L M E + P+ +T L+ + K G L+E + ++
Sbjct: 291 VTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 350
Query: 354 AIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEK----NMVSWNAIIAAYVQNGR 409
I++ P + ++L++ + +L A+ +F + K N+V++N +I + + R
Sbjct: 351 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR 410
Query: 410 NEEALELFHCLRNQTL-----------------------------------KPDAVTIAS 434
EE +ELF + + L PD +T +
Sbjct: 411 VEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSI 470
Query: 435 ILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFK- 493
+L + + + + Y+ K ++ + +T N ++ K G ++ F S+S K
Sbjct: 471 LLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG 530
Query: 494 ---NLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGW 550
N++ + TMI + G + LF MK++G PN T+ +L+ + G
Sbjct: 531 VKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASA 590
Query: 551 ELFNSMK 557
EL M+
Sbjct: 591 ELIKEMR 597
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/401 (20%), Positives = 178/401 (44%), Gaps = 51/401 (12%)
Query: 52 KRGMIKPNSLSLTRSLCEFVDSGAMDNALYLFEKMN----QPDTYIWNVIIRGFSNKGLF 107
++G I+ + + T + + +++AL LF +M+ +P+ +N +IR N G +
Sbjct: 247 EKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRW 306
Query: 108 QEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSL 167
+ M I + TF +I A + +E +K++ ++IK +D DI+ +SL
Sbjct: 307 SDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 366
Query: 168 IDMYFKFGFVEVAEKVFEAMPLRD----LVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGE 223
I+ + ++ A+ +FE M +D +V++N ++ G+ C
Sbjct: 367 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGF-----------C--------- 406
Query: 224 KPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAER 283
K R V G E+ ++ + GL + + +LI + G D A++
Sbjct: 407 KAKR---------------VEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQK 451
Query: 284 VFNEMTCK----NIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCS 339
+F +M +I+ ++ ++ G G ++ + +Q+ + PD T ++
Sbjct: 452 IFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMC 511
Query: 340 KFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEK----NMV 395
K G + +G + K P++++ T ++ + + G + A+ +F + E N
Sbjct: 512 KAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSG 571
Query: 396 SWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASIL 436
++N +I A +++G + EL +R+ DA TI+ ++
Sbjct: 572 TYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVI 612
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 89/473 (18%), Positives = 192/473 (40%), Gaps = 51/473 (10%)
Query: 191 DLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIH 250
DL S+N ++N + +L +M+ LG +PD +++ S L G G + +
Sbjct: 114 DLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALV 173
Query: 251 CQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCK----NIVAWNAMIGGYAIN 306
Q+ + + + +LI K A + + M + ++ + ++ G
Sbjct: 174 DQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKR 233
Query: 307 GHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLE 366
G + + LK+M++ + D + ++ + + + + + K P++V
Sbjct: 234 GDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTY 293
Query: 367 TALVDMYGKCGQLKFAECVFGRINEK----NMVSWNAIIAAYVQNGRNEEALELFHCLRN 422
+L+ G+ A + + E+ N+V+++A+I A+V+ G+ EA +L+ +
Sbjct: 294 NSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 353
Query: 423 QTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQT 482
+++ PD T +S++ + + E K + + + N T N ++ + K ++
Sbjct: 354 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEE 413
Query: 483 ARRYFDSMSFK----NLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLS 538
F MS + N V++NT+I G ++ ++F +M +G+ P+ T+ LL
Sbjct: 414 GMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLD 473
Query: 539 S-CSI----------------------------------SGLVNEGWELFNSMKMDYNID 563
C +G V +GW+LF S+ + +
Sbjct: 474 GLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK-GVK 532
Query: 564 YGIEHYGCMVDLLGRTGNLDAAKQFIEEMP---LVPTARIWGSLLTASRNNND 613
+ Y M+ R G + A EM +P + + +L+ A + D
Sbjct: 533 PNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGD 585
>AT1G12300.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:4184163-4186076 REVERSE
Length = 637
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 125/545 (22%), Positives = 242/545 (44%), Gaps = 39/545 (7%)
Query: 77 DNALYLFEKMNQ----PDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFV 132
D+A+ LF M P ++ + + + V+ +ME +GI + +T +
Sbjct: 70 DDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIM 129
Query: 133 IKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFV----EVAEKVFEAMP 188
I R GK+IK+G + + ++LI+ G V E+ +++ E
Sbjct: 130 INCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGH 189
Query: 189 LRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKE 248
DL++ N +VNG + G ++++ +M+ G +P+ ++ L C G
Sbjct: 190 KPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVM----CKSGQTA 245
Query: 249 IHCQVIR----NGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCK----NIVAWNAMI 300
+ +++R ++LD + + +ID K G +D A +FNEM K NI+ +N +I
Sbjct: 246 LAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILI 305
Query: 301 GGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFL 360
GG+ G + + L+ M + + P+ +T L+ S K G L E + +H I +
Sbjct: 306 GGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIA 365
Query: 361 PHLVLETALVDMYGKCGQL----KFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALEL 416
P + T+L+D + K L + + + + + N+ ++N +I Y + R ++ LEL
Sbjct: 366 PDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLEL 425
Query: 417 FHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAK 476
F + + + D VT +++ + EL ++ K++ + ++ N T ++
Sbjct: 426 FRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCD 485
Query: 477 CGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISI-----QLFSRMKQNGIEPNES 531
G+ + A F+ + K+ + + I IHG S LF + G++P
Sbjct: 486 NGESEKALEIFEKIE-KSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVK 544
Query: 532 TFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRT--GNLDAAK--Q 587
T+ ++ G ++E LF M+ D G G ++L R G+ DA K +
Sbjct: 545 TYNIMIGGLCKKGPLSEAELLFRKMEED-----GHAPDGWTYNILIRAHLGDGDATKSVK 599
Query: 588 FIEEM 592
IEE+
Sbjct: 600 LIEEL 604
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 82/404 (20%), Positives = 175/404 (43%), Gaps = 22/404 (5%)
Query: 57 KPNSLSLTRSLCEFVDSGAMDNALYLFEKMNQP----DTYIWNVIIRGFSNKGLFQEVID 112
+PN+++ L SG A+ L KM + D +++II G G +
Sbjct: 225 QPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFN 284
Query: 113 FYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYF 172
++ ME +GI + T+ +I + +G K+ +IK ++ ++ + LID +
Sbjct: 285 LFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFV 344
Query: 173 KFGFVEVAEKVFEAMPLR----DLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRL 228
K G + AE++ + M R D +++ +++G+ K+ M+ G P+
Sbjct: 345 KEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIR 404
Query: 229 SMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEM 288
+ + G + G E+ ++ G+ D + +LI + + GK++ A+ +F EM
Sbjct: 405 TFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEM 464
Query: 289 TCK----NIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDA---ITMINLLPSCSKF 341
+ NIV + ++ G NG ++ +++++ + D +I+ + + SK
Sbjct: 465 VSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKV 524
Query: 342 GTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMV----SW 397
+ C K P + ++ K G L AE +F ++ E ++
Sbjct: 525 DDAWDLFCSLPL---KGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTY 581
Query: 398 NAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAE 441
N +I A++ +G ++++L L+ DA TI ++ ++
Sbjct: 582 NILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSD 625
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 91/221 (41%), Gaps = 15/221 (6%)
Query: 455 ITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSM----SFKNLVSWNTMIMAYAIHGF 510
I KL NT T + ++ G + A D M +L++ NT++ + G
Sbjct: 149 IIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGK 208
Query: 511 GTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYG 570
++ L +M + G +PN T+ +L+ SG EL M+ + NI Y
Sbjct: 209 EAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKME-ERNIKLDAVKYS 267
Query: 571 CMVDLLGRTGNLDAAKQFIEEMPL-------VPTARIWGSLLTASRNNNDIFFAEFAAKH 623
++D L + G+LD A EM + + + G A R ++ A+
Sbjct: 268 IIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDG---AKLLRDM 324
Query: 624 ILSHDNDNTGCYVLLANMYAEAGRWEDVEQIKLVMKKKGLA 664
I N N + +L + + + G+ + E++ M +G+A
Sbjct: 325 IKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIA 365
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/301 (19%), Positives = 133/301 (44%), Gaps = 32/301 (10%)
Query: 386 FGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELA-- 443
F +++N+ S+ + + + + + ++A++LF + + P + + + A A+
Sbjct: 46 FSAFSDRNL-SYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQY 104
Query: 444 --TVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMS-------FKN 494
++ CKQ+ ++ N +T + ++ + +C L A F +M N
Sbjct: 105 DLVLALCKQMELK----GIAHNLYTLSIMINCFCRCRKLCLA---FSAMGKIIKLGYEPN 157
Query: 495 LVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFN 554
++++T+I + G + +++L RM + G +P+ T +L++ +SG E L +
Sbjct: 158 TITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLID 217
Query: 555 SMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEM--------PLVPTARIWGSLLT 606
M ++Y YG +++++ ++G A + + +M + + I G
Sbjct: 218 KM-VEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKH 276
Query: 607 ASRNNNDIFFAEFAAKHILSHDNDNTGCYVLLANMYAEAGRWEDVEQIKLVMKKKGLAKT 666
S +N F E K I + N Y +L + AGRW+D ++ M K+ +
Sbjct: 277 GSLDNAFNLFNEMEMKGITT----NIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPN 332
Query: 667 V 667
V
Sbjct: 333 V 333
>AT1G62670.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23204773-23206665 REVERSE
Length = 630
Score = 122 bits (306), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 114/567 (20%), Positives = 252/567 (44%), Gaps = 71/567 (12%)
Query: 76 MDNALYLFEKMNQ----PDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPF 131
+D+A+ LF +M + P ++ ++ + F VI +M+ GI +++T+
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121
Query: 132 VIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRD 191
+I R V GK++K+G + +I +SL++ Y ++++ EA+ L D
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCH------SKRISEAVALVD 175
Query: 192 ----------LVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGC 241
V++N +++G + +++ M+ G +PD + + G G
Sbjct: 176 QMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPD----LVTYGVVVNGL 231
Query: 242 CVRGGKEIHCQVI----RNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCK----NI 293
C RG ++ ++ + LE +++ ++ID K +D A +F EM K N+
Sbjct: 232 CKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNV 291
Query: 294 VAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGY 353
V ++++I G + ++ L M E + PD T L+ + K G L+E + ++
Sbjct: 292 VTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDE 351
Query: 354 AIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEA 413
+++ P ++V+++++I + + R +EA
Sbjct: 352 MVKRSIDP-------------------------------SIVTYSSLINGFCMHDRLDEA 380
Query: 414 LELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYM 473
++F + ++ PD VT +++ + + V E ++ +++ L NT T N ++
Sbjct: 381 KQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQG 440
Query: 474 YAKCGDLQTARRYFDSMSF----KNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPN 529
+ GD A+ F M N++++NT++ +G ++ +F ++++ +EP
Sbjct: 441 LFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPT 500
Query: 530 ESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFI 589
T+ ++ +G V +GW+LF ++ + + + Y M+ R G+ + A
Sbjct: 501 IYTYNIMIEGMCKAGKVEDGWDLFCNLSLK-GVKPDVVAYNTMISGFCRKGSKEEADALF 559
Query: 590 EEMP---LVPTARIWGSLLTASRNNND 613
+EM +P + + +L+ A + D
Sbjct: 560 KEMKEDGTLPNSGCYNTLIRARLRDGD 586
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 94/450 (20%), Positives = 193/450 (42%), Gaps = 23/450 (5%)
Query: 2 AVKLSHSYFFNSYKPDDASFKQMGAPKRDLLVNPRIRKSNPTKKQMSETPKRGMIKPNSL 61
AV L F Y+P+ +F + L ++ K++ + +G +P+ +
Sbjct: 170 AVALVDQMFVTGYQPNTVTFNTL---IHGLFLH---NKASEAMALIDRMVAKG-CQPDLV 222
Query: 62 SLTRSLCEFVDSGAMDNALYLFEKMNQ----PDTYIWNVIIRGFSNKGLFQEVIDFYHRM 117
+ + G D A L KM Q P I+N II G + ++ + M
Sbjct: 223 TYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEM 282
Query: 118 EYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFV 177
E +GI + T+ +I + + ++ +I+ ++ D++ ++LID + K G +
Sbjct: 283 ETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKL 342
Query: 178 EVAEKVFEAMPLR----DLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISS 233
AEK+++ M R +V+++ ++NG+ + ++ F+ M+ PD ++ +
Sbjct: 343 VEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTL 402
Query: 234 LGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTC--- 290
+ G V G E+ ++ + GL + + LI + G D A+ +F EM
Sbjct: 403 IKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGV 462
Query: 291 -KNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKC 349
NI+ +N ++ G NG ++ + +Q + P T ++ K G + +G
Sbjct: 463 PPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWD 522
Query: 350 IHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVS----WNAIIAAYV 405
+ K P +V ++ + + G + A+ +F + E + +N +I A +
Sbjct: 523 LFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARL 582
Query: 406 QNGRNEEALELFHCLRNQTLKPDAVTIASI 435
++G E + EL +R+ DA TI +
Sbjct: 583 RDGDREASAELIKEMRSCGFAGDASTIGLV 612
>AT1G31840.1 | Symbols: | LOCATED IN: endomembrane system;
EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11
growth stages; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT3G22470.1); Has
23098 Blast hits to 5773 proteins in 180 species: Archae
- 3; Bacteria - 16; Metazoa - 407; Fungi - 450; Plants -
21304; Viruses - 0; Other Eukaryotes - 918 (source: NCBI
BLink). | chr1:11424006-11426528 FORWARD
Length = 840
Score = 122 bits (306), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 118/540 (21%), Positives = 234/540 (43%), Gaps = 90/540 (16%)
Query: 177 VEVAEK----VFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMIS 232
+EVA + V + P ++V++ ++NG+ G+ ++ FK M G +PD ++ +
Sbjct: 267 IEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYST 326
Query: 233 SLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCK- 291
+ G + G ++ Q + G++LD++V +S ID+Y K G + A V+ M C+
Sbjct: 327 LIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQG 386
Query: 292 ---NIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGK 348
N+V + +I G +G E+F ++ + + P +T +L+ K G L G
Sbjct: 387 ISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGF 446
Query: 349 CIHGYAIRKMFLPHLVLETALVDMYGKCG----QLKFAECVFGRINEKNMVSWNAIIAAY 404
++ I+ + P +V+ LVD K G ++F+ + G+ N+V +N++I +
Sbjct: 447 ALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGW 506
Query: 405 -----------------------------------VQNGRNEEALELFHCLRNQTLKPDA 429
+ GR EEAL LF + L+PDA
Sbjct: 507 CRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDA 566
Query: 430 VTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDS 489
+ +++ A+ + + Q+ + + ++S++ N ++++ KC ++ A ++F++
Sbjct: 567 LAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNN 626
Query: 490 M----SFKNLVSWNTMIMAYA----------------IHGFG------TI---------- 513
+ ++V++NTMI Y + FG TI
Sbjct: 627 LIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNND 686
Query: 514 ---SIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYG 570
+I++FS M + G +PN T+ L+ S S + ++LF M+ + I I Y
Sbjct: 687 MDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQ-EKGISPSIVSYS 745
Query: 571 CMVDLLGRTGNLDAAKQFIEE---MPLVPTARIWGSLLTASRNNNDIFFAEFAAKHILSH 627
++D L + G +D A + L+P + L+ + A +H+L +
Sbjct: 746 IIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRN 805
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 91/431 (21%), Positives = 178/431 (41%), Gaps = 44/431 (10%)
Query: 52 KRGMIKPNSLSLTRSLCEFVDSGAMDNALYLFEKMNQ----PDTYIWNVIIRGFSNKGLF 107
KRGM +P+ ++ + + F G + + L+E M + PD I+ V++ G S +GL
Sbjct: 419 KRGM-EPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLM 477
Query: 108 QEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSL 167
+ F +M + I ++ F +I RL F E KV + G+ D+ ++
Sbjct: 478 LHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTV 537
Query: 168 IDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDR 227
+ + G +E ++L F M +G +PD
Sbjct: 538 MRVSIMEGRLE-------------------------------EALFLFFRMFKMGLEPDA 566
Query: 228 LSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNE 287
L+ + + G ++ + RN + DI V +I + KC +++ A + FN
Sbjct: 567 LAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNN 626
Query: 288 MTC----KNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGT 343
+ +IV +N MI GY E+ + ++ P+ +T+ L+ K
Sbjct: 627 LIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNND 686
Query: 344 LLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEK----NMVSWNA 399
+ + K P+ V L+D + K ++ + +F + EK ++VS++
Sbjct: 687 MDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSI 746
Query: 400 IIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLE 459
II + GR +EA +FH + L PD V A ++ Y ++ + E ++ ++ +
Sbjct: 747 IIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNG 806
Query: 460 LSSNTFTSNAI 470
+ + A+
Sbjct: 807 VKPDDLLQRAL 817
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 102/529 (19%), Positives = 210/529 (39%), Gaps = 88/529 (16%)
Query: 89 PDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKV 148
P+ + +I GF +G D + ME GI D + +I + G K+
Sbjct: 284 PNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKL 343
Query: 149 HGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLR----DLVSWNCMVNGYRV 204
+ + G+ D+ V +S ID+Y K G + A V++ M + ++V++ ++ G
Sbjct: 344 FSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQ 403
Query: 205 IGDGLKSLMCFKEMLGLGEKPDRLSMISSLGG-CSIGCCVRGGKEIHCQVIRNGLELDIM 263
G ++ + ++L G +P ++ S + G C G +R G ++ +I+ G D++
Sbjct: 404 DGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGN-LRSGFALYEDMIKMGYPPDVV 462
Query: 264 VQTSLIDMYAKCGKVDYAERVFNEMTCK----NIVAWNAMIGGYAINGHFLESFTCLKRM 319
+ L+D +K G + +A R +M + N+V +N++I G+ F E+ + M
Sbjct: 463 IYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLM 522
Query: 320 QEDNLIPDAITMINLL-------------------------PSCSKFGTLLEGKCIH--- 351
+ PD T ++ P + TL++ C H
Sbjct: 523 GIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKP 582
Query: 352 --GYAI-----RKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNM----VSWNAI 400
G + R + + ++ + KC +++ A F + E M V++N +
Sbjct: 583 TIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTM 642
Query: 401 IAAYVQNGRNEEALELFHCLR-----------------------------------NQTL 425
I Y R +EA +F L+ +
Sbjct: 643 ICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGS 702
Query: 426 KPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARR 485
KP+AVT ++ +++ + ++ + + +S + + + I+ K G + A
Sbjct: 703 KPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATN 762
Query: 486 YF----DSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNE 530
F D+ ++V++ +I Y G + L+ M +NG++P++
Sbjct: 763 IFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDD 811
>AT3G22470.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:7966066-7967925 REVERSE
Length = 619
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 120/537 (22%), Positives = 234/537 (43%), Gaps = 56/537 (10%)
Query: 76 MDNALYLFEKMNQ----PDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPF 131
+++A+ LFE M Q P +N + + + V+ F ME GI D +T
Sbjct: 51 VNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTI 110
Query: 132 VIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVA----EKVFEAM 187
+I R + V G+ K+G + D ++L++ + G V A +++ E
Sbjct: 111 MINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMK 170
Query: 188 PLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGK 247
DLV+ + ++NG + G ++L+ M+ G +PD ++ G C G
Sbjct: 171 QRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVT----YGPVLNRLCKSGNS 226
Query: 248 EIHCQVIRNGLELDI---MVQTSL-IDMYAKCGKVDYAERVFNEMTCK----NIVAWNAM 299
+ + R E +I +VQ S+ ID K G D A +FNEM K ++V ++++
Sbjct: 227 ALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSL 286
Query: 300 IGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMF 359
IGG +G + + L+ M N+IPD +T L+ K G LLE K ++ I +
Sbjct: 287 IGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGI 346
Query: 360 LPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHC 419
P + +++N++I + + EA ++F
Sbjct: 347 AP-------------------------------DTITYNSLIDGFCKENCLHEANQMFDL 375
Query: 420 LRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGD 479
+ ++ +PD VT + ++ +Y + V + ++ I+ L NT T N +V + + G
Sbjct: 376 MVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGK 435
Query: 480 LQTARRYFDSMSFK----NLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVS 535
L A+ F M + ++V++ ++ +G ++++F +M+++ + +
Sbjct: 436 LNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNI 495
Query: 536 LLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEM 592
++ + V++ W LF S+ D + + Y M+ L + G+L A +M
Sbjct: 496 IIHGMCNASKVDDAWSLFCSLS-DKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKM 551
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 95/474 (20%), Positives = 195/474 (41%), Gaps = 58/474 (12%)
Query: 14 YKPDDASFKQMGAPKRDLLVNPRIRKSNPTKKQMSETPKRGMIKPNSLSLTRSLCEFVDS 73
Y+PD +F + + R+ ++ +M E +R P+ ++++ +
Sbjct: 136 YEPDTITFSTL---VNGFCLEGRVSEAVALVDRMVEMKQR----PDLVTVSTLINGLCLK 188
Query: 74 GAMDNALYLFEKMN----QPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTF 129
G + AL L ++M QPD + ++ G +D + +ME I +
Sbjct: 189 GRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQY 248
Query: 130 PFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPL 189
VI + + SF + + ++ G+ D+ +SLI G + K+ M
Sbjct: 249 SIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIG 308
Query: 190 R----DLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRG 245
R D+V+++ +++ + G L++ + EM+ G PD ++ S + G C+
Sbjct: 309 RNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHE 368
Query: 246 GKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCK----NIVAWNAMIG 301
++ ++ G E DI+ + LI+ Y K +VD R+F E++ K N + +N ++
Sbjct: 369 ANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVL 428
Query: 302 GYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLP 361
G+ +G + + M + P +T +G LL+G C +
Sbjct: 429 GFCQSGKLNAAKELFQEMVSRGVPPSVVT----------YGILLDGLCDN---------- 468
Query: 362 HLVLETALVDMYGKCGQLKFAECVFGRINEKNMV----SWNAIIAAYVQNGRNEEALELF 417
G+L A +F ++ + M +N II + ++A LF
Sbjct: 469 ---------------GELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLF 513
Query: 418 HCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIV 471
L ++ +KPD VT ++ + ++SE + + + + + FT N ++
Sbjct: 514 CSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILI 567
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 69/314 (21%), Positives = 135/314 (42%), Gaps = 23/314 (7%)
Query: 367 TALVDMYGKCGQLKFAECVFGRI----NEKNMVSWNAIIAAYVQNGRNEEALELFHCLRN 422
T +++ Y + +L FA V GR E + ++++ ++ + GR EA+ L +
Sbjct: 109 TIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVE 168
Query: 423 QTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQT 482
+PD VT+++++ VSE + + + + T ++ K G+
Sbjct: 169 MKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSAL 228
Query: 483 ARRYFDSMSFKNL----VSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLS 538
A F M +N+ V ++ +I + G ++ LF+ M+ GI+ + T+ SL+
Sbjct: 229 ALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIG 288
Query: 539 SCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEM---PLV 595
G ++G ++ M + NI + + ++D+ + G L AK+ EM +
Sbjct: 289 GLCNDGKWDDGAKMLREM-IGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIA 347
Query: 596 PTARIWGSLLTASRNNNDIFFAEFAAKHILSHDNDNTGC------YVLLANMYAEAGRWE 649
P + SL+ N + A ++S GC Y +L N Y +A R +
Sbjct: 348 PDTITYNSLIDGFCKENCLHEANQMFDLMVSK-----GCEPDIVTYSILINSYCKAKRVD 402
Query: 650 DVEQIKLVMKKKGL 663
D ++ + KGL
Sbjct: 403 DGMRLFREISSKGL 416
>AT1G05670.2 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transferase
family protein | chr1:1698574-1702715 REVERSE
Length = 1184
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 118/517 (22%), Positives = 229/517 (44%), Gaps = 29/517 (5%)
Query: 61 LSLTRSLCEFVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYE 120
L++T S +F D +Y ++ D +++V + + GL +E + +M
Sbjct: 594 LNVTDSFVQF-----FDLLVYTYKDWGS-DPRVFDVFFQVLVDFGLLREARRVFEKMLNY 647
Query: 121 GIGID----NFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGF 176
G+ + N + K C + + I V + ++G+ ++ N +I + G
Sbjct: 648 GLVLSVDSCNVYLTRLSKDCYKTATAI---IVFREFPEVGVCWNVASYNIVIHFVCQLGR 704
Query: 177 VEVAEKVFEAMPLR----DLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMIS 232
++ A + M L+ D++S++ +VNGY G+ K + M G KP+ S
Sbjct: 705 IKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGS 764
Query: 233 SLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKN 292
+G C + +E ++IR G+ D +V T+LID + K G + A + F EM ++
Sbjct: 765 IIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRD 824
Query: 293 I----VAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGK 348
I + + A+I G+ G +E+ M L PD++T L+ K G + +
Sbjct: 825 ITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAF 884
Query: 349 CIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRIN----EKNMVSWNAIIAAY 404
+H + I+ P++V T L+D K G L A + + + N+ ++N+I+
Sbjct: 885 RVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGL 944
Query: 405 VQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNT 464
++G EEA++L L D VT +++ AY + + + ++I + L
Sbjct: 945 CKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTI 1004
Query: 465 FTSNAIVYMYAKCGDLQTARRYFDSMSFK----NLVSWNTMIMAYAIHGFGTISIQLFSR 520
T N ++ + G L+ + + M K N ++N+++ Y I + ++
Sbjct: 1005 VTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKD 1064
Query: 521 MKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMK 557
M G+ P+ T+ +L+ + + E W LF MK
Sbjct: 1065 MCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMK 1101
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 90/441 (20%), Positives = 196/441 (44%), Gaps = 19/441 (4%)
Query: 268 LIDMYAKCGKVDYAERVFNEMTCK----NIVAWNAMIGGYAINGHFLESFTCLKRMQEDN 323
+I + G++ A + M K ++++++ ++ GY G + + ++ M+
Sbjct: 695 VIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKG 754
Query: 324 LIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAE 383
L P++ +++ + L E + IR+ LP V+ T L+D + K G ++ A
Sbjct: 755 LKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAAS 814
Query: 384 CVFGRINEKNM----VSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAY 439
F ++ +++ +++ AII+ + Q G EA +LFH + + L+PD+VT ++ Y
Sbjct: 815 KFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGY 874
Query: 440 AELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMS----FKNL 495
+ + + ++H ++ + S N T ++ K GDL +A M N+
Sbjct: 875 CKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNI 934
Query: 496 VSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNS 555
++N+++ G +++L + G+ + T+ +L+ + SG +++ E+
Sbjct: 935 FTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKE 994
Query: 556 MKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEM---PLVPTARIWGSLLTASRNNN 612
M + + I + +++ G L+ ++ + M + P A + SL+ N
Sbjct: 995 M-LGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRN 1053
Query: 613 DIFFAEFAAKHILSHDNDNTG-CYVLLANMYAEAGRWEDVEQIKLVMKKKGLAKTVDCCT 671
++ A K + S G Y L + +A ++ + MK KG + +V +
Sbjct: 1054 NLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYS 1113
Query: 672 VESKG--KSQKFINNNKSHQQ 690
V KG K +KF+ + Q
Sbjct: 1114 VLIKGFLKRKKFLEAREVFDQ 1134
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 123/578 (21%), Positives = 232/578 (40%), Gaps = 83/578 (14%)
Query: 243 VRGGKEIHCQVIRNGLELDI-MVQTSLIDMYAKCGKVDYAERVFNEM----TCKNIVAWN 297
+R + + +++ GL L + L + C K A VF E C N+ ++N
Sbjct: 634 LREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYN 693
Query: 298 AMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRK 357
+I G E+ L M+ PD I+ ++ +FG L + + RK
Sbjct: 694 IVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRK 753
Query: 358 MFLPHLVLETALVDMYGKCGQLKFAECVFGRINEK----NMVSWNAIIAAYVQNGRNEEA 413
P+ + +++ + + +L AE F + + + V + +I + + G A
Sbjct: 754 GLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAA 813
Query: 414 LELFHCLRNQTLKPDAVTIASILPAYAELATVSEC-KQIHAYITK-LELSSNTFTSNAIV 471
+ F+ + ++ + PD +T +I+ + ++ + E K H K LE S TFT ++
Sbjct: 814 SKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTE--LI 871
Query: 472 YMYAKCGDLQTARRYFDSM----SFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIE 527
Y K G ++ A R + M N+V++ T+I G + +L M + G++
Sbjct: 872 NGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQ 931
Query: 528 PNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQ 587
PN T+ S+++ SG + E +L + ++ Y ++D ++G +D A++
Sbjct: 932 PNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAA-GLNADTVTYTTLMDAYCKSGEMDKAQE 990
Query: 588 FIEEM---PLVPTARIWGSLLTASRNNNDIFFAEFAAKHILSHDNDNTGCYVLLANMYAE 644
++EM L PT + L+ N +
Sbjct: 991 ILKEMLGKGLQPTIVTFNVLM----------------------------------NGFCL 1016
Query: 645 AGRWEDVEQIKLVMKKKGLAKTVDCCTVESKGKSQKFINNNKSHQQAYMIYDVLDIILKK 704
G ED E++ M KG+A + T S K NN K+ Y D+ +
Sbjct: 1017 HGMLEDGEKLLNWMLAKGIAP--NATTFNSLVKQYCIRNNLKAATAIYK-----DMCSRG 1069
Query: 705 IGED-------VYIHSLSK-FRPADVIKKKMKSPQNHSVKLAICFGLISTAIGKPIIIRK 756
+G D V H ++ + A + ++MK + SV ++ LI K + RK
Sbjct: 1070 VGPDGKTYENLVKGHCKARNMKEAWFLFQEMKG-KGFSVSVSTYSVLI-----KGFLKRK 1123
Query: 757 NTRICKDCHIAAKKISRVTKREIIVGDSKIFHHFEDGR 794
+ A+++ +RE + D +IF F D +
Sbjct: 1124 K-------FLEAREVFDQMRREGLAADKEIFDFFSDTK 1154
>AT1G05670.1 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transferase
family protein | chr1:1698574-1702715 REVERSE
Length = 1184
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 118/517 (22%), Positives = 229/517 (44%), Gaps = 29/517 (5%)
Query: 61 LSLTRSLCEFVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYE 120
L++T S +F D +Y ++ D +++V + + GL +E + +M
Sbjct: 594 LNVTDSFVQF-----FDLLVYTYKDWGS-DPRVFDVFFQVLVDFGLLREARRVFEKMLNY 647
Query: 121 GIGID----NFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGF 176
G+ + N + K C + + I V + ++G+ ++ N +I + G
Sbjct: 648 GLVLSVDSCNVYLTRLSKDCYKTATAI---IVFREFPEVGVCWNVASYNIVIHFVCQLGR 704
Query: 177 VEVAEKVFEAMPLR----DLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMIS 232
++ A + M L+ D++S++ +VNGY G+ K + M G KP+ S
Sbjct: 705 IKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGS 764
Query: 233 SLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKN 292
+G C + +E ++IR G+ D +V T+LID + K G + A + F EM ++
Sbjct: 765 IIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRD 824
Query: 293 I----VAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGK 348
I + + A+I G+ G +E+ M L PD++T L+ K G + +
Sbjct: 825 ITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAF 884
Query: 349 CIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRIN----EKNMVSWNAIIAAY 404
+H + I+ P++V T L+D K G L A + + + N+ ++N+I+
Sbjct: 885 RVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGL 944
Query: 405 VQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNT 464
++G EEA++L L D VT +++ AY + + + ++I + L
Sbjct: 945 CKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTI 1004
Query: 465 FTSNAIVYMYAKCGDLQTARRYFDSMSFK----NLVSWNTMIMAYAIHGFGTISIQLFSR 520
T N ++ + G L+ + + M K N ++N+++ Y I + ++
Sbjct: 1005 VTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKD 1064
Query: 521 MKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMK 557
M G+ P+ T+ +L+ + + E W LF MK
Sbjct: 1065 MCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMK 1101
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 90/441 (20%), Positives = 196/441 (44%), Gaps = 19/441 (4%)
Query: 268 LIDMYAKCGKVDYAERVFNEMTCK----NIVAWNAMIGGYAINGHFLESFTCLKRMQEDN 323
+I + G++ A + M K ++++++ ++ GY G + + ++ M+
Sbjct: 695 VIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKG 754
Query: 324 LIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAE 383
L P++ +++ + L E + IR+ LP V+ T L+D + K G ++ A
Sbjct: 755 LKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAAS 814
Query: 384 CVFGRINEKNM----VSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAY 439
F ++ +++ +++ AII+ + Q G EA +LFH + + L+PD+VT ++ Y
Sbjct: 815 KFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGY 874
Query: 440 AELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMS----FKNL 495
+ + + ++H ++ + S N T ++ K GDL +A M N+
Sbjct: 875 CKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNI 934
Query: 496 VSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNS 555
++N+++ G +++L + G+ + T+ +L+ + SG +++ E+
Sbjct: 935 FTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKE 994
Query: 556 MKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEM---PLVPTARIWGSLLTASRNNN 612
M + + I + +++ G L+ ++ + M + P A + SL+ N
Sbjct: 995 M-LGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRN 1053
Query: 613 DIFFAEFAAKHILSHDNDNTG-CYVLLANMYAEAGRWEDVEQIKLVMKKKGLAKTVDCCT 671
++ A K + S G Y L + +A ++ + MK KG + +V +
Sbjct: 1054 NLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYS 1113
Query: 672 VESKG--KSQKFINNNKSHQQ 690
V KG K +KF+ + Q
Sbjct: 1114 VLIKGFLKRKKFLEAREVFDQ 1134
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 123/578 (21%), Positives = 232/578 (40%), Gaps = 83/578 (14%)
Query: 243 VRGGKEIHCQVIRNGLELDI-MVQTSLIDMYAKCGKVDYAERVFNEM----TCKNIVAWN 297
+R + + +++ GL L + L + C K A VF E C N+ ++N
Sbjct: 634 LREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYN 693
Query: 298 AMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRK 357
+I G E+ L M+ PD I+ ++ +FG L + + RK
Sbjct: 694 IVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRK 753
Query: 358 MFLPHLVLETALVDMYGKCGQLKFAECVFGRINEK----NMVSWNAIIAAYVQNGRNEEA 413
P+ + +++ + + +L AE F + + + V + +I + + G A
Sbjct: 754 GLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAA 813
Query: 414 LELFHCLRNQTLKPDAVTIASILPAYAELATVSEC-KQIHAYITK-LELSSNTFTSNAIV 471
+ F+ + ++ + PD +T +I+ + ++ + E K H K LE S TFT ++
Sbjct: 814 SKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTE--LI 871
Query: 472 YMYAKCGDLQTARRYFDSM----SFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIE 527
Y K G ++ A R + M N+V++ T+I G + +L M + G++
Sbjct: 872 NGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQ 931
Query: 528 PNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQ 587
PN T+ S+++ SG + E +L + ++ Y ++D ++G +D A++
Sbjct: 932 PNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAA-GLNADTVTYTTLMDAYCKSGEMDKAQE 990
Query: 588 FIEEM---PLVPTARIWGSLLTASRNNNDIFFAEFAAKHILSHDNDNTGCYVLLANMYAE 644
++EM L PT + L+ N +
Sbjct: 991 ILKEMLGKGLQPTIVTFNVLM----------------------------------NGFCL 1016
Query: 645 AGRWEDVEQIKLVMKKKGLAKTVDCCTVESKGKSQKFINNNKSHQQAYMIYDVLDIILKK 704
G ED E++ M KG+A + T S K NN K+ Y D+ +
Sbjct: 1017 HGMLEDGEKLLNWMLAKGIAP--NATTFNSLVKQYCIRNNLKAATAIYK-----DMCSRG 1069
Query: 705 IGED-------VYIHSLSK-FRPADVIKKKMKSPQNHSVKLAICFGLISTAIGKPIIIRK 756
+G D V H ++ + A + ++MK + SV ++ LI K + RK
Sbjct: 1070 VGPDGKTYENLVKGHCKARNMKEAWFLFQEMKG-KGFSVSVSTYSVLI-----KGFLKRK 1123
Query: 757 NTRICKDCHIAAKKISRVTKREIIVGDSKIFHHFEDGR 794
+ A+++ +RE + D +IF F D +
Sbjct: 1124 K-------FLEAREVFDQMRREGLAADKEIFDFFSDTK 1154
>AT1G12620.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:4294883-4296748 REVERSE
Length = 621
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 125/545 (22%), Positives = 239/545 (43%), Gaps = 39/545 (7%)
Query: 77 DNALYLFEKMNQ----PDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFV 132
D+A+ LF++M + P ++ + + + V+D +ME +GI + +T +
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113
Query: 133 IKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFV----EVAEKVFEAMP 188
I C R GK+IK+G + D ++LI+ G V E+ +++ E
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173
Query: 189 LRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKE 248
L++ N +VNG + G +++ M+ G +P+ ++ G C G
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTY----GPVLKVMCKSGQTA 229
Query: 249 IHCQVIR----NGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCK----NIVAWNAMI 300
+ +++R ++LD + + +ID K G +D A +FNEM K +I+ + +I
Sbjct: 230 LAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLI 289
Query: 301 GGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFL 360
G+ G + + L+ M + + PD + L+ K G L E + +H I++
Sbjct: 290 RGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGIS 349
Query: 361 PHLVLETALVDMYGKCGQLKFAECVFGRINEK----NMVSWNAIIAAYVQNGRNEEALEL 416
P V T+L+D + K QL A + + K N+ ++N +I Y + ++ LEL
Sbjct: 350 PDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLEL 409
Query: 417 FHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAK 476
F + + + D VT +++ + EL + K++ + + + + ++
Sbjct: 410 FRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCD 469
Query: 477 CGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISI-----QLFSRMKQNGIEPNES 531
G+ + A F+ + K+ + + I IHG S LF + G++P+
Sbjct: 470 NGEPEKALEIFEKIE-KSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVK 528
Query: 532 TFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRT--GNLDAAK--Q 587
T+ ++ G ++E LF M+ D G GC ++L R G DA K +
Sbjct: 529 TYNIMIGGLCKKGSLSEADLLFRKMEED-----GHSPNGCTYNILIRAHLGEGDATKSAK 583
Query: 588 FIEEM 592
IEE+
Sbjct: 584 LIEEI 588
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 81/405 (20%), Positives = 174/405 (42%), Gaps = 24/405 (5%)
Query: 57 KPNSLSLTRSLCEFVDSGAMDNALYLFEKMNQP----DTYIWNVIIRGFSNKGLFQEVID 112
+PN ++ L SG A+ L KM + D +++II G G +
Sbjct: 209 QPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFN 268
Query: 113 FYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYF 172
++ ME +G D + +I+ + +G K+ +IK + D+ ++LID +
Sbjct: 269 LFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFV 328
Query: 173 KFGFVEVAEKVFEAMPLR----DLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRL 228
K G + AE++ + M R D V++ +++G+ K+ M+ G P+
Sbjct: 329 KEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIR 388
Query: 229 SMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEM 288
+ + G + G E+ ++ G+ D + +LI + + GK++ A+ +F EM
Sbjct: 389 TFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEM 448
Query: 289 TCK----NIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLP----SCSK 340
+ +IV++ ++ G NG ++ +++++ + D I + N++ + SK
Sbjct: 449 VSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELD-IGIYNIIIHGMCNASK 507
Query: 341 FGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEK----NMVS 396
+ C K P + ++ K G L A+ +F ++ E N +
Sbjct: 508 VDDAWDLFCSLPL---KGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCT 564
Query: 397 WNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAE 441
+N +I A++ G ++ +L ++ DA T+ ++ ++
Sbjct: 565 YNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLSD 609
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 123/294 (41%), Gaps = 51/294 (17%)
Query: 53 RGMIK----PNSLSLTRSLCEFVDSGAMDNALYLFEKMNQ----PDTYIWNVIIRGFSNK 104
R MIK P+ ++ + + FV G + A L ++M Q PDT + +I GF +
Sbjct: 306 RDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKE 365
Query: 105 GLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVC 164
+ M +G G + TF +I + +G ++ K+ G+ D
Sbjct: 366 NQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTY 425
Query: 165 NSLIDMYFKFGFVEVAEKVFEAMPLR----DLVSWNCMVNGYRVIGDGLKSLMCFKEMLG 220
N+LI + + G +EVA+++F+ M R D+VS+ +++G G+ K+L
Sbjct: 426 NTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKAL-------- 477
Query: 221 LGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDY 280
EI ++ ++ +ELDI + +I KVD
Sbjct: 478 ---------------------------EIFEKIEKSKMELDIGIYNIIIHGMCNASKVDD 510
Query: 281 AERVFNEMTCK----NIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAIT 330
A +F + K ++ +N MIGG G E+ ++M+ED P+ T
Sbjct: 511 AWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCT 564
>AT4G19440.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:10602006-10604483 REVERSE
Length = 825
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 122/533 (22%), Positives = 221/533 (41%), Gaps = 55/533 (10%)
Query: 56 IKPNSLSLTRSLCEFVDSGAMDNALYLFEKMNQ----PDTYIWNVIIRGFSNKGLFQEVI 111
+ P+ T ++ F G ++ A+ LF KM + P+ +N +I G G + E
Sbjct: 256 VSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAF 315
Query: 112 DFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMY 171
F +M G+ T+ ++K R + V ++ K G ++ V N+LID +
Sbjct: 316 MFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSF 375
Query: 172 FKFGFVEVAEKVFEAMPLRDLV----SWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDR 227
+ G + A ++ + M + L ++N ++ GY G + KEML +G ++
Sbjct: 376 IEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQ 435
Query: 228 LSMIS--------------------------SLGGCSIGCCVRG----GK-----EIHCQ 252
S S S GG + + G GK E+ Q
Sbjct: 436 GSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQ 495
Query: 253 VIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCK----NIVAWNAMIGGYAINGH 308
+ G +D +L+ + GK+D A R+ E+ + + V++N +I G
Sbjct: 496 FLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKK 555
Query: 309 FLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETA 368
E+F L M + L PD T L+ + E R LP + +
Sbjct: 556 LDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSV 615
Query: 369 LVDMYGKCGQLKFAECVFGRINEKNM----VSWNAIIAAYVQNGRNEEALELFHCLRNQT 424
++D K + + + F + KN+ V +N +I AY ++GR ALEL ++++
Sbjct: 616 MIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKG 675
Query: 425 LKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTAR 484
+ P++ T S++ + ++ V E K + + L N F A++ Y K G +
Sbjct: 676 ISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVE 735
Query: 485 RYFDSMSFKNL----VSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTF 533
M KN+ +++ MI YA G T + +L + M++ GI P+ T+
Sbjct: 736 CLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITY 788
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 111/488 (22%), Positives = 211/488 (43%), Gaps = 52/488 (10%)
Query: 156 GLDRDIYVCNSLIDMYFKFGFVEVAEKVF----EAMPLRDLVSWNCMVNGYRVIGDGLKS 211
G+ D+Y+ + I+ + K G VE A K+F EA ++V++N +++G + G ++
Sbjct: 255 GVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEA 314
Query: 212 LMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDM 271
M ++M+ G +P ++ + G + + + ++ + G +++V +LID
Sbjct: 315 FMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDS 374
Query: 272 YAKCGKVDYAERVFNEMTCKNIV----AWNAMIGGYAINGHFLESFTCLKRMQE------ 321
+ + G ++ A + + M K + +N +I GY NG + LK M
Sbjct: 375 FIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVN 434
Query: 322 ------------DNLIPDA-------ITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPH 362
+L+ D+ + + N+ P TL+ G C HG + + L
Sbjct: 435 QGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWF 494
Query: 363 LVLETALVD--------MYGKCGQLKFAEC------VFGRINEKNMVSWNAIIAAYVQNG 408
L V ++G C K E + GR + VS+N +I+
Sbjct: 495 QFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKK 554
Query: 409 RNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSN 468
+ +EA + + LKPD T + ++ + V E Q + + + +T +
Sbjct: 555 KLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYS 614
Query: 469 AIVYMYAKCGDLQTARRYFDSMSFKNL----VSWNTMIMAYAIHGFGTISIQLFSRMKQN 524
++ K + + +FD M KN+ V +N +I AY G +++++L MK
Sbjct: 615 VMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHK 674
Query: 525 GIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDA 584
GI PN +T+ SL+ SI V E LF M+M+ ++ + HY ++D G+ G +
Sbjct: 675 GISPNSATYTSLIKGMSIISRVEEAKLLFEEMRME-GLEPNVFHYTALIDGYGKLGQMVK 733
Query: 585 AKQFIEEM 592
+ + EM
Sbjct: 734 VECLLREM 741
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 95/504 (18%), Positives = 191/504 (37%), Gaps = 80/504 (15%)
Query: 47 MSETPKRGMIKPNSLSLTRSLCEFVDSGAMDNALYLFEKMNQP----DTYIWNVIIRGFS 102
+ E K+G PN + + F+++G+++ A+ + + M + +N +I+G+
Sbjct: 353 LKEMTKKG-FPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYC 411
Query: 103 NKGLFQEVIDFYHRMEYEGIGIDNFTFPFVI-------------------------KACG 137
G M G ++ +F VI G
Sbjct: 412 KNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGG 471
Query: 138 RLLSFIEGKKVHGK----------LIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAM 187
L + I G HGK + G D N+L+ + G ++ A ++ + +
Sbjct: 472 LLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEI 531
Query: 188 PLR----DLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCV 243
R D VS+N +++G ++ M EM+ G KPD + + G V
Sbjct: 532 LGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKV 591
Query: 244 RGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNI----VAWNAM 299
+ RNG+ D+ + +ID K + + + F+EM KN+ V +N +
Sbjct: 592 EEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHL 651
Query: 300 IGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMF 359
I Y +G + + M+ + P++ T +L+ S + E K + +M
Sbjct: 652 IRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLL----FEEMR 707
Query: 360 LPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHC 419
+ L E N+ + A+I Y + G+ + L
Sbjct: 708 MEGL---------------------------EPNVFHYTALIDGYGKLGQMVKVECLLRE 740
Query: 420 LRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGD 479
+ ++ + P+ +T ++ YA V+E ++ + + + ++ T +Y Y K G
Sbjct: 741 MHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGG 800
Query: 480 LQTARRYFDSMSFKNLVS-WNTMI 502
+ A + D ++ ++ WN +I
Sbjct: 801 VLEAFKGSDEENYAAIIEGWNKLI 824
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 103/473 (21%), Positives = 185/473 (39%), Gaps = 79/473 (16%)
Query: 253 VIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEM----TCKNIVAWNAMIGGYAINGH 308
V+ G+ D+ + T+ I+ + K GKV+ A ++F++M N+V +N +I G + G
Sbjct: 251 VVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGR 310
Query: 309 FLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETA 368
+ E+F ++M E + P IT L+ ++ + + + +K F P++++
Sbjct: 311 YDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNN 370
Query: 369 LVDMYGKCGQLKFAECVFGRINEKNMV----SWNAIIAAYVQNGRNEEALELFH------ 418
L+D + + G L A + + K + ++N +I Y +NG+ + A L
Sbjct: 371 LIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIG 430
Query: 419 ------------CLRNQTLKPDA-------VTIASILPAYAELATVSECKQIHAYITK-L 458
CL L D+ + + ++ P L T+ H +K L
Sbjct: 431 FNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAL 490
Query: 459 EL---------SSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFK----NLVSWNTMIMAY 505
EL +T TSNA+++ + G L A R + + + VS+NT+I
Sbjct: 491 ELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGC 550
Query: 506 AIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYG 565
+ M + G++P+ T+ L+ LFN K++ I +
Sbjct: 551 CGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICG------------LFNMNKVEEAIQFW 598
Query: 566 IEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLLTASRNNNDIFFAEFAAKHIL 625
D R G L + + I G FF E +K++
Sbjct: 599 --------DDCKRNGMLPDVYTY--------SVMIDGCCKAERTEEGQEFFDEMMSKNV- 641
Query: 626 SHDNDNTGCYVLLANMYAEAGRWEDVEQIKLVMKKKGLAKTVDCCTVESKGKS 678
NT Y L Y +GR +++ MK KG++ T KG S
Sbjct: 642 ---QPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMS 691
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD
Length = 806
Score = 119 bits (299), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 121/545 (22%), Positives = 239/545 (43%), Gaps = 94/545 (17%)
Query: 82 LFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKA---CGR 138
+F +MN+PD I Y +ME I ++ ++F +IK C +
Sbjct: 115 VFVRMNRPDV------------------AISLYRKMEIRRIPLNIYSFNILIKCFCDCHK 156
Query: 139 LLSFIEGKKVHGKLIKIGLDRDIYVCNSLI----------DMYFKFGFVEVAEKVFEAMP 188
L SF GKL K+G D+ N+L+ + FG++ V EA+
Sbjct: 157 L-SF--SLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYM-VETGFLEAVA 212
Query: 189 LRD----------LVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGG-C 237
L D ++++N ++NG + G L++ +M+G G D ++ + + G C
Sbjct: 213 LFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMC 272
Query: 238 SIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCK----NI 293
+G + + ++ ++ D+++ +++ID K G A+ +F+EM K N+
Sbjct: 273 KMGD-TKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNV 331
Query: 294 VAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGY 353
+N MI G+ G + ++ L+ M E + PD +T L+ + K G L E + +
Sbjct: 332 FTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDE 391
Query: 354 AIRKMFLPHLVLETALVDMYGKCGQLKF--AECVFGRINEKNMVSWNAIIAAYVQNGRNE 411
+ + P V +++ YG C +F A+ +F + ++V++N II Y + R +
Sbjct: 392 MLHRCIFPDTVTYNSMI--YGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVD 449
Query: 412 EALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIV 471
E ++L + + L + T +++ + E+ ++ + + + + +T T N ++
Sbjct: 450 EGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILL 509
Query: 472 YMYAKCGDLQTARRYFDSMSFKNL----VSWNTMIM----------------AYAIHGF- 510
Y + + L+ A F+ + + V++N +I + IHG
Sbjct: 510 YGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVE 569
Query: 511 --------------GTISIQ----LFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWEL 552
G +I LF +MK NG EP+ ST+ +L+ C +G +++ EL
Sbjct: 570 PDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIEL 629
Query: 553 FNSMK 557
+ M+
Sbjct: 630 ISEMR 634
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 84/460 (18%), Positives = 183/460 (39%), Gaps = 67/460 (14%)
Query: 71 VDSGAMDNALYLFEKMNQ----PDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDN 126
V++G ++ A+ LF++M + P +N +I G +G E ++M +G+ ID
Sbjct: 203 VETGFLE-AVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDV 261
Query: 127 FTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEA 186
T+ ++ ++ + K+ + + D+ + +++ID K G A+ +F
Sbjct: 262 VTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSE 321
Query: 187 MPLR----DLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCC 242
M + ++ ++NCM++G+ G + ++M+ PD L+ I
Sbjct: 322 MLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTF-----NALISAS 376
Query: 243 VRGGK----EIHC-QVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWN 297
V+ GK E C +++ + D + S+I + K + D A+ +F+ M ++V +N
Sbjct: 377 VKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFN 436
Query: 298 AMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRK 357
+I Y E L+ + L+ + T L+ + L + + I
Sbjct: 437 TIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISH 496
Query: 358 MFLPHLVLETALVDMYGKCGQLKFAE---------------------------CVFGRIN 390
P + T + +YG C K E C +++
Sbjct: 497 GVCPDTI--TCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVD 554
Query: 391 E--------------KNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASIL 436
E ++ ++N +I+ + +A LFH +++ +PD T +++
Sbjct: 555 EAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLI 614
Query: 437 PAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAK 476
+ + + ++ + E+ SN F+ +A A+
Sbjct: 615 RGCLKAGEIDKSIELIS-----EMRSNGFSGDAFTIKMAE 649
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD
Length = 666
Score = 119 bits (299), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 123/556 (22%), Positives = 246/556 (44%), Gaps = 80/556 (14%)
Query: 75 AMDNALYLFEKMNQPDTYIW----NVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFP 130
++D+A+ F+ M + + N +I F I Y +ME I ++ ++F
Sbjct: 86 SLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFN 145
Query: 131 FVIKA---CGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLI----------DMYFKFGFV 177
+IK C +L SF GKL K+G D+ N+L+ + FG++
Sbjct: 146 ILIKCFCDCHKL-SF--SLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYM 202
Query: 178 EVAEKVFEAMPLRD----------LVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDR 227
V EA+ L D ++++N ++NG + G L++ +M+G G D
Sbjct: 203 -VETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDV 261
Query: 228 LSMISSLGG-CSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFN 286
++ + + G C +G + + ++ ++ D+++ +++ID K G A+ +F+
Sbjct: 262 VTYGTIVNGMCKMGD-TKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFS 320
Query: 287 EMTCK----NIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFG 342
EM K N+ +N MI G+ G + ++ L+ M E + PD +T L+ + K G
Sbjct: 321 EMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEG 380
Query: 343 TLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKF--AECVFGRINEKNMVSWNAI 400
L E + + + + P V +++ YG C +F A+ +F + ++V++N I
Sbjct: 381 KLFEAEKLCDEMLHRCIFPDTVTYNSMI--YGFCKHNRFDDAKHMFDLMASPDVVTFNTI 438
Query: 401 IAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLEL 460
I Y + R +E ++L + + L + T +++ + E+ ++ + + + +
Sbjct: 439 IDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGV 498
Query: 461 SSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNL----VSWNTMIM------------- 503
+T T N ++Y + + L+ A F+ + + V++N +I
Sbjct: 499 CPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWD 558
Query: 504 ---AYAIHGF---------------GTISIQ----LFSRMKQNGIEPNESTFVSLLSSCS 541
+ IHG G +I LF +MK NG EP+ ST+ +L+ C
Sbjct: 559 LFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCL 618
Query: 542 ISGLVNEGWELFNSMK 557
+G +++ EL + M+
Sbjct: 619 KAGEIDKSIELISEMR 634
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 90/481 (18%), Positives = 192/481 (39%), Gaps = 71/481 (14%)
Query: 71 VDSGAMDNALYLFEKMNQ----PDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDN 126
V++G ++ A+ LF++M + P +N +I G +G E ++M +G+ ID
Sbjct: 203 VETGFLE-AVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDV 261
Query: 127 FTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEA 186
T+ ++ ++ + K+ + + D+ + +++ID K G A+ +F
Sbjct: 262 VTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSE 321
Query: 187 MPLR----DLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCC 242
M + ++ ++NCM++G+ G + ++M+ PD L+ I
Sbjct: 322 MLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTF-----NALISAS 376
Query: 243 VRGGK----EIHC-QVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWN 297
V+ GK E C +++ + D + S+I + K + D A+ +F+ M ++V +N
Sbjct: 377 VKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFN 436
Query: 298 AMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRK 357
+I Y E L+ + L+ + T L+ + L + + I
Sbjct: 437 TIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISH 496
Query: 358 MFLPHLVLETALVDMYGKCGQLKFAE---------------------------CVFGRIN 390
P + T + +YG C K E C +++
Sbjct: 497 GVCPDTI--TCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVD 554
Query: 391 EK--------------NMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASIL 436
E ++ ++N +I+ + +A LFH +++ +PD T +++
Sbjct: 555 EAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLI 614
Query: 437 PAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLV 496
+ + + ++ + E+ SN F+ +A + DL T R SF +++
Sbjct: 615 RGCLKAGEIDKSIELIS-----EMRSNGFSGDA--FTIKMVADLITDGRL--DKSFSDML 665
Query: 497 S 497
S
Sbjct: 666 S 666
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD
Length = 816
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 117/552 (21%), Positives = 236/552 (42%), Gaps = 69/552 (12%)
Query: 38 RKSNPTKKQMSETPKRGMIKPNSLSLTRSLCEFVDSGAMDNALYLFEKMN----QPDTYI 93
++ N ++ E R ++ P+ ++ + + +G + + + E+M +P
Sbjct: 228 KRMNDAEQLFDEMLARRLL-PSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLIT 286
Query: 94 WNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLI 153
+N +++G G+ ++ + M+ G D FTF + V+ +
Sbjct: 287 FNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAV 346
Query: 154 KIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVS----WNCMVNGYRVIGDGL 209
G+ + Y C+ L++ K G +E AE++ + LV +N M++GY GD +
Sbjct: 347 DSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLV 406
Query: 210 KSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLI 269
+ M + M G KPD L+ +C LI
Sbjct: 407 GARMKIEAMEKQGMKPDHLAY-------------------NC----------------LI 431
Query: 270 DMYAKCGKVDYAERVFNEMTCK----NIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLI 325
+ + G+++ AE+ N+M K ++ +N +IGGY F + F LK M+++ +
Sbjct: 432 RRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTM 491
Query: 326 PDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQ------L 379
P+ ++ L+ K LLE + + + P + + L+D G C +
Sbjct: 492 PNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLID--GCCSKGKIEDAF 549
Query: 380 KFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAY 439
+F++ + + E N+V++N +I G+ EA +L + + LKPD T S++ Y
Sbjct: 550 RFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGY 609
Query: 440 AELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFK-NLVSW 498
V C ++ + + + T + ++ + K G ++ R F MS K +L+ +
Sbjct: 610 GFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEG-IELTERLFGEMSLKPDLLVY 668
Query: 499 NTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSS-------CSISGLVNEGWE 551
N ++ YA+HG + L +M + I +++T+ SL+ C + L++E
Sbjct: 669 NGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDE--- 725
Query: 552 LFNSMKMDYNID 563
N+ +M+ D
Sbjct: 726 -MNAREMEPEAD 736
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 99/433 (22%), Positives = 176/433 (40%), Gaps = 78/433 (18%)
Query: 246 GKEIHCQV----IRNGLEL-----------DIMVQTSLIDMYAKCGKVDYAERVFNEMTC 290
GK I V + GLEL + + LID K +++ AE++F+EM
Sbjct: 183 GKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLA 242
Query: 291 K----NIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLE 346
+ +++ +N +I GY G+ +SF +RM+ D++ P IT LL K G + +
Sbjct: 243 RRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVED 302
Query: 347 GKCIHGYAIRKMFLPHL---------------------VLETA--------------LVD 371
+ + F+P V ETA L++
Sbjct: 303 AENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLN 362
Query: 372 MYGKCGQLKFAECVFGRINEKNMVS----WNAIIAAYVQNGRNEEALELFHCLRNQTLKP 427
K G+++ AE + GR K +V +N +I Y + G A + Q +KP
Sbjct: 363 ALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKP 422
Query: 428 DAVTIASILPAYAELATVSECKQIHAYITKLEL---SSNTFTSNAIV------YMYAKCG 478
D + ++ + EL E + + K++L S + T N ++ Y + KC
Sbjct: 423 DHLAYNCLIRRFCELG---EMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCF 479
Query: 479 DLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSR-MKQNGIEPNESTFVSLL 537
D+ + D+ + N+VS+ T+I G + Q+ R M+ G+ P + L+
Sbjct: 480 DI--LKEMEDNGTMPNVVSYGTLINCLC-KGSKLLEAQIVKRDMEDRGVSPKVRIYNMLI 536
Query: 538 SSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMP---L 594
C G + + + M + I+ + Y ++D L TG L A+ + E+ L
Sbjct: 537 DGCCSKGKIEDAFRFSKEM-LKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGL 595
Query: 595 VPTARIWGSLLTA 607
P + SL++
Sbjct: 596 KPDVFTYNSLISG 608
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/373 (21%), Positives = 160/373 (42%), Gaps = 23/373 (6%)
Query: 317 KRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHG-----YAIRKMFL-----PHLVLE 366
KRM + + D + LLPS + TL++G C G + +R+ P L+
Sbjct: 228 KRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITF 287
Query: 367 TALVDMYGKCGQLKFAECVFGRINEKNMV----SWNAIIAAYVQNGRNEEALELFHCLRN 422
L+ K G ++ AE V + + V +++ + Y N + E AL ++ +
Sbjct: 288 NTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVD 347
Query: 423 QTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQT 482
+K +A T + +L A + + + ++I L N N ++ Y + GDL
Sbjct: 348 SGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVG 407
Query: 483 ARRYFDSMSFKNL----VSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLS 538
AR ++M + + +++N +I + G + + ++MK G+ P+ T+ L+
Sbjct: 408 ARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIG 467
Query: 539 SCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAA---KQFIEEMPLV 595
++ +++ M+ D + YG +++ L + L A K+ +E+ +
Sbjct: 468 GYGRKYEFDKCFDILKEME-DNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVS 526
Query: 596 PTARIWGSLLTASRNNNDIFFAEFAAKHILSHDND-NTGCYVLLANMYAEAGRWEDVEQI 654
P RI+ L+ + I A +K +L + N Y L + + G+ + E +
Sbjct: 527 PKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDL 586
Query: 655 KLVMKKKGLAKTV 667
L + +KGL V
Sbjct: 587 LLEISRKGLKPDV 599
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/375 (20%), Positives = 150/375 (40%), Gaps = 28/375 (7%)
Query: 307 GHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLE 366
G LE F RM+ D + P L+ K + + + + + + LP L+
Sbjct: 196 GKGLELFN---RMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITY 252
Query: 367 TALVDMYGKCGQLKFAECVFGRIN----EKNMVSWNAIIAAYVQNGRNEEALELFHCLRN 422
L+D Y K G + + V R+ E +++++N ++ + G E+A + +++
Sbjct: 253 NTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKD 312
Query: 423 QTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQT 482
PDA T + + Y+ ++ + N +T + ++ K G ++
Sbjct: 313 LGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEK 372
Query: 483 ARRYFDSMSFKNLVS----WNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLS 538
A K LV +NTMI Y G + M++ G++P+ + L+
Sbjct: 373 AEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIR 432
Query: 539 S-CSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMP---L 594
C + + N E+ N MK+ + +E Y ++ GR D ++EM
Sbjct: 433 RFCELGEMENAEKEV-NKMKLK-GVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGT 490
Query: 595 VPTARIWGSLLTASRNNNDIFFAEFAAKHILSHDNDNTGC------YVLLANMYAEAGRW 648
+P +G+L+ + + A+ I+ D ++ G Y +L + G+
Sbjct: 491 MPNVVSYGTLINCLCKGSKLLEAQ-----IVKRDMEDRGVSPKVRIYNMLIDGCCSKGKI 545
Query: 649 EDVEQIKLVMKKKGL 663
ED + M KKG+
Sbjct: 546 EDAFRFSKEMLKKGI 560
>AT5G61990.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:24900186-24903110 REVERSE
Length = 974
Score = 115 bits (289), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 114/516 (22%), Positives = 213/516 (41%), Gaps = 30/516 (5%)
Query: 57 KPNSLSLTRSLCEFVDSGAMDNALYLFEKMNQ----PDTYIWNVIIRGFSNKGLFQEVID 112
+PN + T + F+ + +A+ + ++M + PD + +N +I G S E
Sbjct: 449 RPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARS 508
Query: 113 FYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYF 172
F M G+ + FT+ I F K ++ + G+ + +C LI+ Y
Sbjct: 509 FLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYC 568
Query: 173 KFGFVEVAEKVFEAMP----LRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRL 228
K G V A + +M L D ++ ++NG + F+EM G G PD
Sbjct: 569 KKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVF 628
Query: 229 SMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEM 288
S + G S ++ I +++ GL ++++ L+ + + G+++ A+ + +EM
Sbjct: 629 SYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEM 688
Query: 289 TCK----NIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTL 344
+ K N V + +I GY +G E+F M+ L+PD+ L+ C + +
Sbjct: 689 SVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDV 748
Query: 345 LEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECV--------FGRINEKNMVS 396
I G +K AL++ K G+ + V F R + N V+
Sbjct: 749 ERAITIFGTN-KKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVT 807
Query: 397 WNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYIT 456
+N +I + G E A ELFH ++N L P +T S+L Y ++ +E +
Sbjct: 808 YNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAI 867
Query: 457 KLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLV---------SWNTMIMAYAI 507
+ + + I+ + K G A D M KN V + ++ +A
Sbjct: 868 AAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAK 927
Query: 508 HGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSIS 543
G ++ ++ M + P+ +T + L++ IS
Sbjct: 928 VGEMEVAEKVMENMVRLQYIPDSATVIELINESCIS 963
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 136/599 (22%), Positives = 250/599 (41%), Gaps = 74/599 (12%)
Query: 76 MDNALYLFEKMN----QPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPF 131
+D AL L E M P Y ++V+I G ++ M+ G+ +DN T+
Sbjct: 258 VDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSL 317
Query: 132 VIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRD 191
+I + + K + +++ G++ Y+ + I + K G +E A+ +F+ M
Sbjct: 318 LIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASG 377
Query: 192 LV----SWNCMVNGY---RVIGDGLKSL---------------------MC--------- 214
L+ ++ ++ GY + + G + L MC
Sbjct: 378 LIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAY 437
Query: 215 --FKEMLGLGEKPDRL---SMISS-LGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSL 268
KEM+ G +P+ + ++I + L G +R KE+ Q G+ DI SL
Sbjct: 438 NIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQ----GIAPDIFCYNSL 493
Query: 269 IDMYAKCGKVDYAERVFNEMT----CKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNL 324
I +K ++D A EM N + A I GY F + +K M+E +
Sbjct: 494 IIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGV 553
Query: 325 IPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAEC 384
+P+ + L+ K G ++E + + + L T L++ K ++ AE
Sbjct: 554 LPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEE 613
Query: 385 VFGRINEK----NMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYA 440
+F + K ++ S+ +I + + G ++A +F + + L P+ + +L +
Sbjct: 614 IFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFC 673
Query: 441 ELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNT 500
+ + K++ ++ L N T I+ Y K GDL A R FD M K LV ++
Sbjct: 674 RSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVP-DS 732
Query: 501 MIMAYAIHGFGTI-----SIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNS 555
+ + G + +I +F K+ G + + F +L++ G E+ N
Sbjct: 733 FVYTTLVDGCCRLNDVERAITIFGTNKK-GCASSTAPFNALINWVFKFGKTELKTEVLNR 791
Query: 556 MKMDYNID-YGIEH---YGCMVDLLGRTGNLDAAKQFIEEMP---LVPTARIWGSLLTA 607
+ MD + D +G + Y M+D L + GNL+AAK+ +M L+PT + SLL
Sbjct: 792 L-MDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNG 849
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 121/589 (20%), Positives = 233/589 (39%), Gaps = 47/589 (7%)
Query: 38 RKSNPTKKQMSETPKRGM-IKPNSLSLTRSLCEFVDSGAMDNALYLFEKMNQ----PDTY 92
R ++ K + E G+ IKP +C G M+ A LF+ M P
Sbjct: 326 RNADAAKGLVHEMVSHGINIKPYMYDCC--ICVMSKEGVMEKAKALFDGMIASGLIPQAQ 383
Query: 93 IWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKL 152
+ +I G+ + ++ + M+ I I +T+ V+K + ++
Sbjct: 384 AYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEM 443
Query: 153 IKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLR----DLVSWNCMVNGYRVIGDG 208
I G ++ + +LI + + A +V + M + D+ +N ++ G
Sbjct: 444 IASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRM 503
Query: 209 LKSLMCFKEMLGLGEKPDRLSMISSLGG----CSIGCCVRGGKEI-HCQVIRNGLELDIM 263
++ EM+ G KP+ + + + G + KE+ C V+ N +
Sbjct: 504 DEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKV----- 558
Query: 264 VQTSLIDMYAKCGKVDYAERVFNEMTCKNIVA----WNAMIGGYAINGHFLESFTCLKRM 319
+ T LI+ Y K GKV A + M + I+ + ++ G N ++ + M
Sbjct: 559 LCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREM 618
Query: 320 QEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQL 379
+ + PD + L+ SK G + + I + + P++++ L+ + + G++
Sbjct: 619 RGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEI 678
Query: 380 KFAECVFGRINEK----NMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASI 435
+ A+ + ++ K N V++ II Y ++G EA LF ++ + L PD+ ++
Sbjct: 679 EKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTL 738
Query: 436 LPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRY--------F 487
+ L V I K +S+T NA++ K G + F
Sbjct: 739 VDGCCRLNDVERAITIFG-TNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSF 797
Query: 488 DSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVN 547
D N V++N MI G + +LF +M+ + P T+ SLL+ G
Sbjct: 798 DRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRA 857
Query: 548 EGWELFNSMKMDYNIDYGIE----HYGCMVDLLGRTGNLDAAKQFIEEM 592
E + +F D I GIE Y +++ + G A +++M
Sbjct: 858 EMFPVF-----DEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQM 901
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 83/409 (20%), Positives = 165/409 (40%), Gaps = 32/409 (7%)
Query: 56 IKPNSLSLTRSLCEFVDSGAMDNALYLFEKMNQP----DTYIWNVIIRGFSNKGLFQEVI 111
+ PN + T + E+ G + A + M D + V++ G +
Sbjct: 553 VLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAE 612
Query: 112 DFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMY 171
+ + M +GI D F++ +I +L + + + ++++ GL ++ + N L+ +
Sbjct: 613 EIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGF 672
Query: 172 FKFGFVEVAEKVFEAMPLRDL----VSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDR 227
+ G +E A+++ + M ++ L V++ +++GY GD ++ F EM G PD
Sbjct: 673 CRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDS 732
Query: 228 LSMISSLGGCSIGCCVRGGKEIHCQVI---RNGLELDIMVQTSLIDMYAKCGKVDYAERV 284
+ + GC C E + + G +LI+ K GK + V
Sbjct: 733 FVYTTLVDGC----CRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEV 788
Query: 285 FNEMT--------CKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLP 336
N + N V +N MI G+ + +MQ NL+P IT +LL
Sbjct: 789 LNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLN 848
Query: 337 SCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMV- 395
K G E + AI P ++ + +++ + K G A + ++ KN V
Sbjct: 849 GYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVD 908
Query: 396 --------SWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASIL 436
+ A+++ + + G E A ++ + PD+ T+ ++
Sbjct: 909 DGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELI 957
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 88/414 (21%), Positives = 168/414 (40%), Gaps = 27/414 (6%)
Query: 397 WNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYIT 456
++ I + G E+A LF + L P A AS++ Y V + ++ +
Sbjct: 350 YDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMK 409
Query: 457 KLELSSNTFTSNAIVYMYAKCGDLQTA----RRYFDSMSFKNLVSWNTMIMAYAIHGFGT 512
K + + +T +V GDL A + S N+V + T+I + +
Sbjct: 410 KRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFG 469
Query: 513 ISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCM 572
++++ MK+ GI P+ + SL+ S + ++E M ++ + YG
Sbjct: 470 DAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEM-VENGLKPNAFTYGAF 528
Query: 573 VDLLGRTGNLDAAKQFIEEMP---LVPTARIWGSLLTASRNNNDIFFAEFAAKHILSHDN 629
+ +A ++++EM ++P + L+ + A A + ++
Sbjct: 529 ISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGI 588
Query: 630 -DNTGCYVLLANMYAEAGRWEDVEQIKLVMKKKGLAKTVDCCTVESKGKSQKFINNNKSH 688
+ Y +L N + + +D E+I M+ KG+A V V G S+ +
Sbjct: 589 LGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKL-----GNM 643
Query: 689 QQAYMIYDVLDIILKKIGEDVYIHS--LSKFRPADVIKKKMKSPQNHSVKLAICFGLIST 746
Q+A I+D +++ + + +V I++ L F + I+K + SVK GL
Sbjct: 644 QKASSIFD--EMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVK-----GLHPN 696
Query: 747 AIGKPIIIRKNTRICKDCHIA-AKKISRVTKREIIVGDSKIFHHFEDGRCSCGD 799
A+ II CK +A A ++ K + +V DS ++ DG C D
Sbjct: 697 AVTYCTIIDG---YCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLND 747
>AT1G74850.1 | Symbols: PTAC2 | PTAC2 (PLASTID TRANSCRIPTIONALLY
ACTIVE2) | chr1:28119237-28122314 REVERSE
Length = 862
Score = 115 bits (289), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 128/586 (21%), Positives = 251/586 (42%), Gaps = 83/586 (14%)
Query: 46 QMSETPKRGMIK------PNSLSLTR---SLCEFVDSGAMDNALYLFEKMNQ-----PDT 91
++S P RG I N LSL EF G +L LF+ M + P+
Sbjct: 82 KLSSLPPRGSIARCLDIFKNKLSLNDFALVFKEFAGRGDWQRSLRLFKYMQRQIWCKPNE 141
Query: 92 YIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGK 151
+I+ ++I +GL + ++ + M +G+ F++ +I A GR + ++ +
Sbjct: 142 HIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDR 201
Query: 152 LIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKS 211
+ + I N++I+ + G + W +GL
Sbjct: 202 MKNEKISPSILTYNTVINACARGG-----------------LDW-----------EGLLG 233
Query: 212 LMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDM 271
L F EM G +PD ++ + L C+I + + + G+ D+ + L++
Sbjct: 234 L--FAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVET 291
Query: 272 YAKCGKVDYAERVFNEM----TCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPD 327
+ K +++ + EM + +I ++N ++ YA +G E+ +MQ P+
Sbjct: 292 FGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPN 351
Query: 328 AIT---MINLLPSCSKFGTLLEGKCIHGYAIRKMFL--------PHLVLETALVDMYGKC 376
A T ++NL ++ +R++FL P L++++G+
Sbjct: 352 ANTYSVLLNLFGQSGRYDD-----------VRQLFLEMKSSNTDPDAATYNILIEVFGEG 400
Query: 377 GQLKFAECVFGRINEKN----MVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTI 432
G K +F + E+N M ++ II A + G +E+A ++ + + P +
Sbjct: 401 GYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAY 460
Query: 433 ASILPAYAELATVSECKQIHAYITKLELSSNTF--TSNAIVYMYAKCGDLQTAR----RY 486
++ A+ + A E + A+ T E+ SN T ++++Y +A+ G ++ + R
Sbjct: 461 TGVIEAFGQAALYEEA--LVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRL 518
Query: 487 FDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLV 546
DS +N ++N I AY G +++ + M+++ +P+E T ++LS S + LV
Sbjct: 519 VDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLV 578
Query: 547 NEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEM 592
+E E F MK +I I Y M+ + G+T D + +EEM
Sbjct: 579 DECREQFEEMKAS-DILPSIMCYCMMLAVYGKTERWDDVNELLEEM 623
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 111/514 (21%), Positives = 212/514 (41%), Gaps = 67/514 (13%)
Query: 167 LIDMYFKFGFVEVAEKVFEAMPL----RDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLG 222
+I + + G ++ +VF+ MP R + S+ ++N Y G SL M
Sbjct: 147 MISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRM---- 202
Query: 223 EKPDRLSMISSLGGCSIGCCVRGGKE------IHCQVIRNGLELDIMVQTSLIDMYAKCG 276
K +++S I C RGG + + ++ G++ DI+ +L+ A G
Sbjct: 203 -KNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRG 261
Query: 277 KVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLP 336
D AE VF M IV H +E+F L+R+++
Sbjct: 262 LGDEAEMVFRTMNDGGIVP------DLTTYSHLVETFGKLRRLEK--------------- 300
Query: 337 SCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINE----K 392
C G + G LP + L++ Y K G +K A VF ++
Sbjct: 301 VCDLLGEMASGGS----------LPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTP 350
Query: 393 NMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIH 452
N +++ ++ + Q+GR ++ +LF +++ PDA T ++ + E E +
Sbjct: 351 NANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLF 410
Query: 453 AYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLV----SWNTMIMAYAIH 508
+ + + + T I++ K G + AR+ M+ ++V ++ +I A+
Sbjct: 411 HDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQA 470
Query: 509 GFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEH 568
++ F+ M + G P+ TF SLL S + GLV E + + + +D I +
Sbjct: 471 ALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRL-VDSGIPRNRDT 529
Query: 569 YGCMVDLLGRTGNL-DAAKQFI--EEMPLVPTARIWGSLLTA---SRNNNDIF--FAEFA 620
+ ++ + G +A K ++ E+ P R ++L+ +R ++ F E
Sbjct: 530 FNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMK 589
Query: 621 AKHILSHDNDNTGCYVLLANMYAEAGRWEDVEQI 654
A IL + CY ++ +Y + RW+DV ++
Sbjct: 590 ASDILP----SIMCYCMMLAVYGKTERWDDVNEL 619
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 130/281 (46%), Gaps = 14/281 (4%)
Query: 392 KNMVSWN---AIIAAYVQNGRNEEALELFHCLRNQTL-KPDAVTIASILPAYAELATVSE 447
KN +S N + + G + +L LF ++ Q KP+ ++ + +
Sbjct: 100 KNKLSLNDFALVFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDK 159
Query: 448 CKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFK----NLVSWNTMIM 503
C ++ + +S + F+ A++ Y + G +T+ D M + +++++NT+I
Sbjct: 160 CLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVIN 219
Query: 504 AYAIHGFGTISI-QLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNI 562
A A G + LF+ M+ GI+P+ T+ +LLS+C+I GL +E +F +M D I
Sbjct: 220 ACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMN-DGGI 278
Query: 563 DYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPL---VPTARIWGSLLTASRNNNDIFFAEF 619
+ Y +V+ G+ L+ + EM +P + LL A + I A
Sbjct: 279 VPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMG 338
Query: 620 AAKHILSHD-NDNTGCYVLLANMYAEAGRWEDVEQIKLVMK 659
+ + N Y +L N++ ++GR++DV Q+ L MK
Sbjct: 339 VFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMK 379
>AT1G63080.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23388884-23390728 REVERSE
Length = 614
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 116/567 (20%), Positives = 251/567 (44%), Gaps = 71/567 (12%)
Query: 76 MDNALYLFEKMNQ----PDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPF 131
+D A+ LF +M + P ++ ++ + F VI F +ME G+ + +T+
Sbjct: 46 LDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNI 105
Query: 132 VIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGF---------VEVAEK 182
+I R + GK++K+G I NSL++ GF V + ++
Sbjct: 106 MINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLN-----GFCHGNRISEAVALVDQ 160
Query: 183 VFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCC 242
+ E D V++ +V+G +++ + M+ G +PD + + G G C
Sbjct: 161 MVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPD----LVTYGAVINGLC 216
Query: 243 VRGGKEIHCQVI----RNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCK----NIV 294
RG ++ ++ + +E D+++ +++ID K VD A +F EM K ++
Sbjct: 217 KRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVF 276
Query: 295 AWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYA 354
++++I G + ++ L M E + P+ +T +L+ + +K G L+E + +
Sbjct: 277 TYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEM 336
Query: 355 IRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEAL 414
I++ P N+V++N++I + + R +EA
Sbjct: 337 IQRSIDP-------------------------------NIVTYNSLINGFCMHDRLDEAQ 365
Query: 415 ELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMY 474
++F + ++ PD VT +++ + + V + ++ +++ L NT T +++ +
Sbjct: 366 QIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGF 425
Query: 475 AKCGDLQTARRYFDSM----SFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNE 530
+ D A+ F M N++++NT++ +G ++ +F ++++ +EP+
Sbjct: 426 FQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDI 485
Query: 531 STFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTG-NLDAAKQFI 589
T+ + +G V +GW+LF S+ + + + Y M+ + G +A FI
Sbjct: 486 YTYNIMSEGMCKAGKVEDGWDLFCSLSLK-GVKPDVIAYNTMISGFCKKGLKEEAYTLFI 544
Query: 590 ---EEMPLVPTARIWGSLLTASRNNND 613
E+ PL P + + +L+ A + D
Sbjct: 545 KMKEDGPL-PDSGTYNTLIRAHLRDGD 570
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 83/374 (22%), Positives = 168/374 (44%), Gaps = 16/374 (4%)
Query: 74 GAMDNALYLFEKMN----QPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTF 129
G D AL L KM + D I++ +I + ++ + M+ +GI D FT+
Sbjct: 219 GEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTY 278
Query: 130 PFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPL 189
+I + + ++ +++ ++ ++ NSLID + K G + AEK+F+ M
Sbjct: 279 SSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQ 338
Query: 190 R----DLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRG 245
R ++V++N ++NG+ + ++ F M+ PD ++ + + G V
Sbjct: 339 RSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVD 398
Query: 246 GKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCK----NIVAWNAMIG 301
G E+ + R GL + + T+LI + + D A+ VF +M NI+ +N ++
Sbjct: 399 GMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLD 458
Query: 302 GYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLP 361
G NG ++ + +Q+ + PD T + K G + +G + K P
Sbjct: 459 GLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKP 518
Query: 362 HLVLETALVDMYGKCGQLKFAECVFGRINEKNMV----SWNAIIAAYVQNGRNEEALELF 417
++ ++ + K G + A +F ++ E + ++N +I A++++G + EL
Sbjct: 519 DVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELI 578
Query: 418 HCLRNQTLKPDAVT 431
+R+ DA T
Sbjct: 579 KEMRSCRFAGDAST 592
>AT1G62720.1 | Symbols: | INVOLVED IN: biological_process unknown;
LOCATED IN: cellular_component unknown; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G62680.1); Has 25425
Blast hits to 6071 proteins in 187 species: Archae - 4;
Bacteria - 14; Metazoa - 596; Fungi - 591; Plants -
23031; Viruses - 0; Other Eukaryotes - 1189 (source:
NCBI BLink). | chr1:23227574-23229031 FORWARD
Length = 485
Score = 114 bits (285), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 114/470 (24%), Positives = 209/470 (44%), Gaps = 52/470 (11%)
Query: 76 MDNALYLFEKMNQ----PDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPF 131
++ + LF KM Q P ++ ++ + + VI +H ME GIG D +++
Sbjct: 50 LEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNI 109
Query: 132 VIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRD 191
VI R F+ V GK++K G + D+ +SLI+ GF + +VF+A+ D
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLIN-----GFCQ-GNRVFDAI---D 160
Query: 192 LVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSL-GGCSIGCCVRGGKEIH 250
LVS +M +G +PD + + + G C IG V E+
Sbjct: 161 LVS----------------------KMEEMGFRPDVVIYNTIIDGSCKIG-LVNDAVELF 197
Query: 251 CQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCK----NIVAWNAMIGGYAIN 306
++ R+G+ D + SL+ G+ A R+ +M + N++ + A+I +
Sbjct: 198 DRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKE 257
Query: 307 GHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLE 366
G F E+ + M + PD T +L+ G + E K + + K LP +V
Sbjct: 258 GKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTY 317
Query: 367 TALVDMYGKCGQLKFAECVFGRINEKNMV----SWNAIIAAYVQNGRNEEALELFHCLRN 422
L++ + K ++ +F + ++ +V ++N II Y Q GR + A E+F + +
Sbjct: 318 NTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDS 377
Query: 423 QTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQT 482
+P+ T + +L V + + + K E+ + T N +++ K G+++
Sbjct: 378 ---RPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVED 434
Query: 483 ARRYFDSMSFKNL----VSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEP 528
A F S+S K L VS+ TMI + S L+ +M+++G+ P
Sbjct: 435 AWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 76/375 (20%), Positives = 169/375 (45%), Gaps = 44/375 (11%)
Query: 191 DLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIH 250
DL S+N ++N + +L +M+ G +PD +++ S + G G V ++
Sbjct: 103 DLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLV 162
Query: 251 CQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNI----VAWNAMIGGYAIN 306
++ G D+++ ++ID K G V+ A +F+ M + V +N+++ G +
Sbjct: 163 SKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCS 222
Query: 307 GHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLE 366
G + ++ ++ M +++P+ IT
Sbjct: 223 GRWSDAARLMRDMVMRDIVPNVITF----------------------------------- 247
Query: 367 TALVDMYGKCGQ----LKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRN 422
TA++D++ K G+ +K E + R + ++ ++N++I +GR +EA ++ +
Sbjct: 248 TAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVT 307
Query: 423 QTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQT 482
+ PD VT +++ + + V E ++ + + L +T T N I+ Y + G
Sbjct: 308 KGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDA 367
Query: 483 ARRYFDSM-SFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCS 541
A+ F M S N+ +++ ++ ++ ++ LF M+++ IE + +T+ ++
Sbjct: 368 AQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMC 427
Query: 542 ISGLVNEGWELFNSM 556
G V + W+LF S+
Sbjct: 428 KIGNVEDAWDLFRSL 442
Score = 80.1 bits (196), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/348 (19%), Positives = 159/348 (45%), Gaps = 9/348 (2%)
Query: 57 KPNSLSLTRSLCEFVDSGAMDNALYLFEKMNQ----PDTYIWNVIIRGFSNKGLFQEVID 112
+P+ ++++ + F + +A+ L KM + PD I+N II G GL + ++
Sbjct: 136 EPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVE 195
Query: 113 FYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYF 172
+ RME +G+ D T+ ++ + + ++ ++ + ++ ++ID++
Sbjct: 196 LFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFV 255
Query: 173 KFGFVEVAEKVFEAMPLR----DLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRL 228
K G A K++E M R D+ ++N ++NG + G ++ M+ G PD +
Sbjct: 256 KEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVV 315
Query: 229 SMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEM 288
+ + + G V G ++ ++ + GL D + ++I Y + G+ D A+ +F+ M
Sbjct: 316 TYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM 375
Query: 289 TCK-NIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEG 347
+ NI ++ ++ G +N ++ + MQ+ + D T ++ K G + +
Sbjct: 376 DSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDA 435
Query: 348 KCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMV 395
+ K P +V T ++ + + Q ++ ++ ++ E ++
Sbjct: 436 WDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLL 483
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/342 (21%), Positives = 149/342 (43%), Gaps = 43/342 (12%)
Query: 252 QVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMT----CKNIVAWNAMIGGYAING 307
++++ G E D++ +SLI+ + + +V A + ++M ++V +N +I G G
Sbjct: 129 KMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIG 188
Query: 308 HFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLET 367
++ RM+ D + DA+T + +L+ G C G R L+ +
Sbjct: 189 LVNDAVELFDRMERDGVRADAVT----------YNSLVAGLCCSG---RWSDAARLMRDM 235
Query: 368 ALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKP 427
+ D+ N++++ A+I +V+ G+ EA++L+ + + + P
Sbjct: 236 VMRDIV------------------PNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDP 277
Query: 428 DAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYF 487
D T S++ V E KQ+ + + T N ++ + K + + F
Sbjct: 278 DVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLF 337
Query: 488 DSMSFKNLV----SWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSIS 543
M+ + LV ++NT+I Y G + ++FSRM PN T+ LL ++
Sbjct: 338 REMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDS---RPNIRTYSILLYGLCMN 394
Query: 544 GLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAA 585
V + LF +M+ I+ I Y ++ + + GN++ A
Sbjct: 395 WRVEKALVLFENMQKS-EIELDITTYNIVIHGMCKIGNVEDA 435
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 120/280 (42%), Gaps = 44/280 (15%)
Query: 56 IKPNSLSLTRSLCEFVDSGAMDNALYLFEKMNQ----PDTYIWNVIIRGFSNKGLFQEVI 111
I PN ++ T + FV G A+ L+E+M + PD + +N +I G G E
Sbjct: 240 IVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAK 299
Query: 112 DFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMY 171
M +G D T+ +I + EG K+ ++ + GL D N++I Y
Sbjct: 300 QMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGY 359
Query: 172 FKFGFVEVAEKVFEAMPLR-DLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSM 230
F+ G + A+++F M R ++ +++ ++ G + K+L+ F+ M
Sbjct: 360 FQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQ----------- 408
Query: 231 ISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTC 290
++ +ELDI +I K G V+ A +F ++C
Sbjct: 409 ------------------------KSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSC 444
Query: 291 K----NIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIP 326
K ++V++ MI G+ + +S ++MQED L+P
Sbjct: 445 KGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
>AT1G12775.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED IN:
7 plant structures; EXPRESSED DURING: F mature embryo
stage, petal differentiation and expansion stage, D
bilateral stage, E expanded cotyledon stage; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT1G12300.1); Has 27792 Blast hits to 6269
proteins in 197 species: Archae - 2; Bacteria - 23;
Metazoa - 895; Fungi - 767; Plants - 24554; Viruses - 0;
Other Eukaryotes - 1551 (source: NCBI BLink). |
chr1:4353906-4355840 FORWARD
Length = 644
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 110/564 (19%), Positives = 249/564 (44%), Gaps = 67/564 (11%)
Query: 77 DNALYLFEKMNQ----PDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFV 132
D+A+ LF M Q P +N + + ++ V+ +ME +GI +T +
Sbjct: 70 DDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIM 129
Query: 133 IKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLID---MYFKFG-FVEVAEKVFEAMP 188
I R GK++K+G + D + N+L++ + + +E+ +++ E
Sbjct: 130 INCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGH 189
Query: 189 LRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKE 248
L++ N +VNG + G +++ M+ G +P+ ++ G C G
Sbjct: 190 KPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVT----YGPVLNVMCKSGQTA 245
Query: 249 IHCQVIR----NGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCK----NIVAWNAMI 300
+ +++R ++LD + + +ID K G +D A +FNEM K +I+ +N +I
Sbjct: 246 LAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLI 305
Query: 301 GGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFL 360
GG+ G + + L+ M I++
Sbjct: 306 GGFCNAGRWDDGAKLLRDM-----------------------------------IKRKIS 330
Query: 361 PHLVLETALVDMYGKCGQLKFAECVFGRINEK----NMVSWNAIIAAYVQNGRNEEALEL 416
P++V + L+D + K G+L+ A+ + + ++ N +++N++I + + R EEA+++
Sbjct: 331 PNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQM 390
Query: 417 FHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAK 476
+ ++ PD +T ++ Y + + + ++ ++ + +NT T N +V + +
Sbjct: 391 VDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQ 450
Query: 477 CGDLQTARRYFDSMSFK----NLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNEST 532
G L+ A++ F M + ++VS+ ++ +G ++++F +++++ +E +
Sbjct: 451 SGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGI 510
Query: 533 FVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEM 592
++ ++ + V++ W+LF S+ + + Y M+ L R +L A +M
Sbjct: 511 YMIIIHGMCNASKVDDAWDLFCSLPLK-GVKLDARAYNIMISELCRKDSLSKADILFRKM 569
Query: 593 PL---VPTARIWGSLLTASRNNND 613
P + L+ A ++D
Sbjct: 570 TEEGHAPDELTYNILIRAHLGDDD 593
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 77/402 (19%), Positives = 174/402 (43%), Gaps = 28/402 (6%)
Query: 57 KPNSLSLTRSLCEFVDSGAMDNALYLFEKMNQP----DTYIWNVIIRGFSNKGLFQEVID 112
+PN ++ L SG A+ L KM + D +++II G G +
Sbjct: 225 QPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFN 284
Query: 113 FYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYF 172
++ ME +G D T+ +I + +G K+ +IK + ++ + LID +
Sbjct: 285 LFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFV 344
Query: 173 KFGFVEVAEKVFEAMPLRDL----VSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRL 228
K G + A+++ + M R + +++N +++G+ +++ M+ G PD +
Sbjct: 345 KEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIM 404
Query: 229 SMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEM 288
+ + G + G E+ ++ G+ + + +L+ + + GK++ A+++F EM
Sbjct: 405 TFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEM 464
Query: 289 TCK----NIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPD-AITMINLLPSC--SKF 341
+ +IV++ ++ G NG ++ ++++ + D I MI + C SK
Sbjct: 465 VSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKV 524
Query: 342 GTLLEGKC---IHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEK----NM 394
+ C + G + ++ E D K A+ +F ++ E+ +
Sbjct: 525 DDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSK------ADILFRKMTEEGHAPDE 578
Query: 395 VSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASIL 436
+++N +I A++ + A EL +++ D T+ ++
Sbjct: 579 LTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVI 620
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 122/294 (41%), Gaps = 51/294 (17%)
Query: 53 RGMIK----PNSLSLTRSLCEFVDSGAMDNALYLFEKMNQ----PDTYIWNVIIRGFSNK 104
R MIK PN ++ + + FV G + A L ++M Q P+T +N +I GF +
Sbjct: 322 RDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKE 381
Query: 105 GLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVC 164
+E I M +G D TF +I + +G ++ ++ G+ +
Sbjct: 382 NRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTY 441
Query: 165 NSLIDMYFKFGFVEVAEKVFEAMPLR----DLVSWNCMVNGYRVIGDGLKSLMCFKEMLG 220
N+L+ + + G +EVA+K+F+ M R D+VS+ +++G G+ K+L
Sbjct: 442 NTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKAL-------- 493
Query: 221 LGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDY 280
EI ++ ++ +ELDI + +I KVD
Sbjct: 494 ---------------------------EIFGKIEKSKMELDIGIYMIIIHGMCNASKVDD 526
Query: 281 AERVFNEMTCKNI----VAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAIT 330
A +F + K + A+N MI ++ ++M E+ PD +T
Sbjct: 527 AWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELT 580
>AT5G39710.1 | Symbols: EMB2745 | EMB2745 (EMBRYO DEFECTIVE 2745) |
chr5:15895729-15897972 FORWARD
Length = 747
Score = 113 bits (282), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 123/545 (22%), Positives = 237/545 (43%), Gaps = 38/545 (6%)
Query: 82 LFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLS 141
+ E P+ + +N++IRGF G + + +ME +G + T+ +I +L
Sbjct: 196 MLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRK 255
Query: 142 FIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLR----DLVSWNC 197
+G K+ + GL+ ++ N +I+ + G ++ V M R D V++N
Sbjct: 256 IDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNT 315
Query: 198 MVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGG-CSIGCCVRGGKEIHCQVIRN 256
++ GY G+ ++L+ EML G P ++ S + C G R + + +R
Sbjct: 316 LIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVR- 374
Query: 257 GLELDIMVQTSLIDMYAKCGKVDYAERVFNEMT----CKNIVAWNAMIGGYAINGHFLES 312
GL + T+L+D +++ G ++ A RV EM ++V +NA+I G+ + G ++
Sbjct: 375 GLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDA 434
Query: 313 FTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDM 372
L+ M+E L PD ++ +L + + E + + K P + ++L+
Sbjct: 435 IAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQ- 493
Query: 373 YGKCGQLKFAECV-----FGRIN-EKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLK 426
G C Q + E R+ + ++ A+I AY G E+AL+L + + + +
Sbjct: 494 -GFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVL 552
Query: 427 PDAVTIASILPAYAELATVSECKQIH-------------AYITKLELSSNTFTSNAIVYM 473
PD VT + ++ + + E K++ Y T +E SN + + +
Sbjct: 553 PDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLI 612
Query: 474 YAKC--GDLQTARRYFDSMSFKNL----VSWNTMIMAYAIHGFGTISIQLFSRMKQNGIE 527
C G + A + F+SM KN ++N MI + G + L+ M ++G
Sbjct: 613 KGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFL 672
Query: 528 PNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQ 587
+ T ++L+ + G VNE + + + E +V++ R GN+D
Sbjct: 673 LHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEA-EQAKVLVEINHREGNMDVVLD 731
Query: 588 FIEEM 592
+ EM
Sbjct: 732 VLAEM 736
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/318 (21%), Positives = 135/318 (42%), Gaps = 41/318 (12%)
Query: 359 FLPHLVLETALVDMYGKCGQ-LKFAECVFGRINEK----NMVSWNAIIAAYVQNGRNEEA 413
F+P ++ A++D + + + FAE VF + E N+ ++N +I + G + A
Sbjct: 165 FMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVA 224
Query: 414 LELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYM 473
L LF + + P+ VT +++ Y +L + + ++ + L N + N ++
Sbjct: 225 LTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVING 284
Query: 474 YAKCGDLQTARRYFDSMSFK----NLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPN 529
+ G ++ M+ + + V++NT+I Y G ++ + + M ++G+ P+
Sbjct: 285 LCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPS 344
Query: 530 ESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFI 589
T+ SL+ S +G +N E + M++ + Y +VD + G ++ A + +
Sbjct: 345 VITYTSLIHSMCKAGNMNRAMEFLDQMRVR-GLCPNERTYTTLVDGFSQKGYMNEAYRVL 403
Query: 590 EEMPLVPTARIWGSLLTASRNNNDIFFAEFAAKHILSHDNDNTGCYVLLANMYAEAGRWE 649
EM ND F+ + Y L N + G+ E
Sbjct: 404 REM-------------------NDNGFSP------------SVVTYNALINGHCVTGKME 432
Query: 650 DVEQIKLVMKKKGLAKTV 667
D + MK+KGL+ V
Sbjct: 433 DAIAVLEDMKEKGLSPDV 450
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 134/311 (43%), Gaps = 31/311 (9%)
Query: 49 ETPKRGMIKPNSLSLTRSLCEFVDSGAMDNALY----LFEKMNQPDTYIWNVIIRGFSNK 104
E K + P+ +S + L F S +D AL + EK +PDT ++ +I+GF +
Sbjct: 439 EDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQ 498
Query: 105 GLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVC 164
+E D Y M G+ D FT+ +I A + ++H ++++ G+ D+
Sbjct: 499 RRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTY 558
Query: 165 NSLIDMYFKFGFVEVAEKVF------EAMP---LRDLVSWNC----------MVNGYRVI 205
+ LI+ K A+++ E++P + NC ++ G+ +
Sbjct: 559 SVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMK 618
Query: 206 GDGLKSLMCFKEMLGLGEKPDRLSM-ISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMV 264
G ++ F+ MLG KPD + I G C G +R ++ +++++G L +
Sbjct: 619 GMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAG-DIRKAYTLYKEMVKSGFLLHTVT 677
Query: 265 QTSLIDMYAKCGKVDYAERVFNEM--TCKNIVAWNAMIGGYAIN---GHFLESFTCLKRM 319
+L+ K GKV+ V + +C+ A A + IN G+ L M
Sbjct: 678 VIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKV-LVEINHREGNMDVVLDVLAEM 736
Query: 320 QEDNLIPDAIT 330
+D +P+ I+
Sbjct: 737 AKDGFLPNGIS 747
>AT2G02150.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:547389-552229 REVERSE
Length = 1141
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 116/550 (21%), Positives = 222/550 (40%), Gaps = 93/550 (16%)
Query: 89 PDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFI----- 143
P +++ + + G+ +E I + +M+ + FP G L F
Sbjct: 58 PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRV------FPKTRSCNGLLHRFAKLGKT 111
Query: 144 -EGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLR----DLVSWNCM 198
+ K+ +I G ++ N +ID K G VE A +FE M R D V++N M
Sbjct: 112 DDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSM 171
Query: 199 VNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGL 258
++G+ +G ++ F+EM + CC
Sbjct: 172 IDGFGKVGRLDDTVCFFEEMKDM-------------------CC---------------- 196
Query: 259 ELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCK----NIVAWNAMIGGYAINGHFLESFT 314
E D++ +LI+ + K GK+ + EM N+V+++ ++ + G ++
Sbjct: 197 EPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIK 256
Query: 315 CLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYG 374
M+ L+P+ T +L+ + K G L + + ++ ++V TAL+D
Sbjct: 257 FYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLC 316
Query: 375 KCGQLKFAECVFGRINE----KNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAV 430
++K AE +FG+++ N+ S+NA+I +V+ + ALEL + L+ + +KPD +
Sbjct: 317 DAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLL 376
Query: 431 TIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSM 490
+ + L + K + E+ +N+++Y
Sbjct: 377 LYGTFIWGLCSLEKIEAAK-----VVMNEMKECGIKANSLIY------------------ 413
Query: 491 SFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGW 550
T++ AY G T + L MK+ IE TF L+ + LV++
Sbjct: 414 --------TTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAV 465
Query: 551 ELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEM---PLVPTARIWGSLLTA 607
+ FN + D+ + + M+D L + ++AA E+M LVP + SL+
Sbjct: 466 DYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDG 525
Query: 608 SRNNNDIFFA 617
+ ++ A
Sbjct: 526 NFKQGNVLEA 535
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/432 (19%), Positives = 197/432 (45%), Gaps = 23/432 (5%)
Query: 62 SLTRSLCEFVDSGAMDNALYLFEKMN----QPDTYIWNVIIRGFSNKGLFQEVIDFYHRM 117
+L C+F G + L + +M +P+ ++ ++ F +G+ Q+ I FY M
Sbjct: 205 ALINCFCKF---GKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDM 261
Query: 118 EYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFV 177
G+ + +T+ +I A ++ + + ++ +++++G++ ++ +LID +
Sbjct: 262 RRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERM 321
Query: 178 EVAEKVFEAMP----LRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISS 233
+ AE++F M + +L S+N +++G+ + ++L E+ G G KPD L +
Sbjct: 322 KEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTF 381
Query: 234 LGG-CSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKN 292
+ G CS+ + K + ++ G++ + ++ T+L+D Y K G + +EM +
Sbjct: 382 IWGLCSLE-KIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELD 440
Query: 293 I----VAWNAMIGGYAINGHFLESFTCLKRMQED-NLIPDAITMINLLPSCSKFGTLLEG 347
I V + +I G N ++ R+ D L +A ++ K +
Sbjct: 441 IEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAA 500
Query: 348 KCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNM----VSWNAIIAA 403
+ ++K +P T+L+D K G + A + ++ E M +++ +++
Sbjct: 501 TTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWG 560
Query: 404 YVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSN 463
+ ++A + + + PD V S+L + EL + E ++ +Y+ K +L ++
Sbjct: 561 LSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQSYLMKHQLLTS 620
Query: 464 TFTSNAIVYMYA 475
NA+ +Y+
Sbjct: 621 D-NDNALPNIYS 631
>AT1G63150.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23419399-23421288 FORWARD
Length = 629
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 113/558 (20%), Positives = 239/558 (42%), Gaps = 56/558 (10%)
Query: 76 MDNALYLFEKMNQ----PDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPF 131
+D+A+ LF M + P +N ++ + F+ VI +M+ GI D +T+
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 132 VIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRD 191
I R V K++K+G + DI +SL++ Y ++++ +A+ L D
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCH------SKRISDAVALVD 177
Query: 192 LVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHC 251
+M+ +G KPD + + + G + +
Sbjct: 178 -------------------------QMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVD 212
Query: 252 QVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTC----KNIVAWNAMIGGYAING 307
Q+++ G + D++ ++++ K G +D A + N+M N+V +N +I
Sbjct: 213 QMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYR 272
Query: 308 HFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLET 367
H + M+ + P+ +T +L+ +G + + + K P++V
Sbjct: 273 HVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFN 332
Query: 368 ALVDMYGKCGQL----KFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQ 423
AL+D + K G+L K E + R + + +++N +I + + R +EA ++F + ++
Sbjct: 333 ALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSK 392
Query: 424 TLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTA 483
P+ T +++ + + V + ++ +++ L NT T I+ + + GD +A
Sbjct: 393 DCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSA 452
Query: 484 RRYFDSMSFKNLVSWNTMIMAYAIHG---FGTISIQL--FSRMKQNGIEPNESTFVSLLS 538
+ F M N V + M + +HG +G + L F ++++ +E N + +++
Sbjct: 453 QMVFKQM-VSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIE 511
Query: 539 SCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMP---LV 595
+G V E W+LF S+ +I + Y M+ L L A +M +
Sbjct: 512 GMCKAGKVGEAWDLFCSL----SIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTL 567
Query: 596 PTARIWGSLLTASRNNND 613
P + + +L+ A+ + D
Sbjct: 568 PNSGTYNTLIRANLRDCD 585
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 101/463 (21%), Positives = 198/463 (42%), Gaps = 52/463 (11%)
Query: 2 AVKLSHSYFFNSYKPDDASFKQMGAPKRDLLVNPRIRKSNPTKKQMSETPKRGMIKPNSL 61
AV L YKPD +F + L ++ + ++ QM + RG +P+ +
Sbjct: 172 AVALVDQMVEMGYKPDTFTFTTL---IHGLFLHNKASEAVALVDQMVQ---RG-CQPDLV 224
Query: 62 SLTRSLCEFVDSGAMDNALYLFEKMN----QPDTYIWNVIIRGFSNKGLFQEVIDFYHRM 117
+ + G +D AL L KM + + I+N II + +D + M
Sbjct: 225 TYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEM 284
Query: 118 EYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFV 177
E +GI + T+ +I + + ++ +++ ++ ++ N+LID +FK G +
Sbjct: 285 ETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKL 344
Query: 178 EVAEKVFEAMPLR----DLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISS 233
AEK+ E M R D +++N ++NG+ + ++ FK M+ D L I +
Sbjct: 345 VEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVS----KDCLPNIQT 400
Query: 234 LGGCSIGCC----VRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMT 289
G C V G E+ ++ + GL + + T++I + + G D A+ VF +M
Sbjct: 401 YNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMV 460
Query: 290 CK----NIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLL 345
+I+ ++ ++ G G + K +Q+ + +N+ + T++
Sbjct: 461 SNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEM------ELNIFI----YNTMI 510
Query: 346 EGKCIHGYAIRKMFL-------PHLVLETALVDMYGKCGQ--LKFAECVFGRINEK---- 392
EG C G L P +V ++ G C + L+ A+ +F ++ E
Sbjct: 511 EGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMIS--GLCSKRLLQEADDLFRKMKEDGTLP 568
Query: 393 NMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASI 435
N ++N +I A +++ + EL +R+ DA TI+ +
Sbjct: 569 NSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTISLV 611
>AT5G55840.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:22598398-22602499 FORWARD
Length = 1274
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 124/575 (21%), Positives = 231/575 (40%), Gaps = 87/575 (15%)
Query: 73 SGAMDNALYLFEKMNQ----PDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFT 128
+G +D A+ L +M++ PD ++ +I GF G F+ + R+ G+ +
Sbjct: 416 NGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGII 475
Query: 129 FPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMP 188
+ +I C R+ E +++ +I G RD + N L+ K G V AE+ M
Sbjct: 476 YSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMT 535
Query: 189 ----LRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVR 244
L + VS++C++NGY G+GLK+ F EM +G P + S L G G +R
Sbjct: 536 SDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLR 595
Query: 245 GGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYA 304
++ L ++A VD V +N ++
Sbjct: 596 EAEKF------------------LKSLHAVPAAVD-------------TVMYNTLLTAMC 624
Query: 305 INGHFLESFTCLKRMQEDNLIPDAITMINLLPS-CSKFGTLLEGKCIHGYAIRKMFLPHL 363
+G+ ++ + M + +++PD+ T +L+ C K T++ R LP+
Sbjct: 625 KSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNK 684
Query: 364 VLETALVDMYGKCGQLK----FAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHC 419
V+ T VD K GQ K F E + + ++V+ NA+I Y + G+ E+ +L
Sbjct: 685 VMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPE 744
Query: 420 LRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGD 479
+ NQ P N T N +++ Y+K D
Sbjct: 745 MGNQNGGP-----------------------------------NLTTYNILLHGYSKRKD 769
Query: 480 LQTARRYFDSMSFKNL----VSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVS 535
+ T+ + S+ + ++ +++++ I +++ G+E + TF
Sbjct: 770 VSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNM 829
Query: 536 LLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMP-- 593
L+S C +G +N ++L M I + MV +L R ++ + EM
Sbjct: 830 LISKCCANGEINWAFDLVKVMT-SLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQ 888
Query: 594 -LVPTARIWGSLLTASRNNNDIFFAEFAAKHILSH 627
+ P +R + L+ DI A + +++H
Sbjct: 889 GISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAH 923
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 110/520 (21%), Positives = 205/520 (39%), Gaps = 16/520 (3%)
Query: 89 PDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKV 148
PD +N++I +G F++ +ME G T+ V+ + F ++
Sbjct: 191 PDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIEL 250
Query: 149 HGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDL----VSWNCMVNGYRV 204
+ G+D D+ N LI + + + M R + V++N ++NG+
Sbjct: 251 LDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSN 310
Query: 205 IGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMV 264
G L + EML G P+ ++ + + G + ++ + GL +
Sbjct: 311 EGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVS 370
Query: 265 QTSLIDMYAKCGKVDYAERVFNEM----TCKNIVAWNAMIGGYAINGHFLESFTCLKRMQ 320
L+D K + D A + M C + + MI G NG E+ L M
Sbjct: 371 YGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMS 430
Query: 321 EDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLK 380
+D + PD +T L+ K G K I R P+ ++ + L+ + G LK
Sbjct: 431 KDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLK 490
Query: 381 FA----ECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASIL 436
A E + + ++ ++N ++ + + G+ EA E C+ + + P+ V+ ++
Sbjct: 491 EAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLI 550
Query: 437 PAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSM----SF 492
Y + + +TK+ FT +++ K G L+ A ++ S+ +
Sbjct: 551 NGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAA 610
Query: 493 KNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWEL 552
+ V +NT++ A G ++ LF M Q I P+ T+ SL+S G
Sbjct: 611 VDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILF 670
Query: 553 FNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEM 592
+ N+ Y C VD + + G A F E+M
Sbjct: 671 AKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQM 710
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 123/581 (21%), Positives = 234/581 (40%), Gaps = 93/581 (16%)
Query: 70 FVDSGAMDNALYLFEKMN----QPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGID 125
++ G + ++L +F M P Y N I+ G V F M I D
Sbjct: 133 YLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPD 192
Query: 126 NFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFE 185
TF +I SF + + K+ K G I N+++ Y K G + A ++ +
Sbjct: 193 VATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLD 252
Query: 186 AMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRG 245
M + + + C N +I D +S K L L + R+
Sbjct: 253 HMKSKGVDADVCTYN--MLIHDLCRSNRIAKGYLLLRDMRKRM----------------- 293
Query: 246 GKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTC----KNIVAWNAMIG 301
IH + +LI+ ++ GKV A ++ NEM N V +NA+I
Sbjct: 294 ---IHPNEV---------TYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALID 341
Query: 302 GYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLP 361
G+ G+F E+ M+ L P ++ +G LL+G C
Sbjct: 342 GHISEGNFKEALKMFYMMEAKGLTPSEVS----------YGVLLDGLC------------ 379
Query: 362 HLVLETALVDMYGKCGQLKFAECVFGRINEKNM----VSWNAIIAAYVQNGRNEEALELF 417
K + A + R+ + +++ +I +NG +EA+ L
Sbjct: 380 -------------KNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLL 426
Query: 418 HCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKC 477
+ + + PD VT ++++ + ++ K+I I ++ LS N + ++Y +
Sbjct: 427 NEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRM 486
Query: 478 GDLQTARRYFDSMSF----KNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTF 533
G L+ A R +++M ++ ++N ++ + G + + M +GI PN +F
Sbjct: 487 GCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSF 546
Query: 534 VSLLSSCSISGLVNEGWELFNSM-KMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEM 592
L++ SG + + +F+ M K+ ++ + YG ++ L + G+L A++F++ +
Sbjct: 547 DCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFT--YGSLLKGLCKGGHLREAEKFLKSL 604
Query: 593 PLVPTA---RIWGSLLTASRNNNDI-----FFAEFAAKHIL 625
VP A ++ +LLTA + ++ F E + IL
Sbjct: 605 HAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSIL 645
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 98/466 (21%), Positives = 177/466 (37%), Gaps = 70/466 (15%)
Query: 62 SLTRSLCEFVDSGAMDNALYLFEKMNQ----PDTYIWNVIIRGFSNKGLFQEVIDFYHRM 117
+L ++C+ SG + A+ LF +M Q PD+Y + +I G KG I F
Sbjct: 618 TLLTAMCK---SGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEA 674
Query: 118 EYEGIGIDN-FTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGF 176
E G + N + + + + G ++ +G DI N++ID Y + G
Sbjct: 675 EARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGK 734
Query: 177 VEVAEKVFEAMPLRD----LVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMIS 232
+E + M ++ L ++N +++GY D S + ++ ++ G PD+L+ S
Sbjct: 735 IEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHS 794
Query: 233 SLGGCSIGCCVRGGKEIHCQVIR----NGLELDIMVQTSLIDMYAKCGKVDYAERVFNEM 288
+ +G C EI ++++ G+E+D LI G++++A + M
Sbjct: 795 LV----LGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVM 850
Query: 289 TCKNIV----AWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTL 344
T I +AM+ N F ES L M + + P++ I L+ + G +
Sbjct: 851 TSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDI 910
Query: 345 LEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAE--------------------- 383
+ I P V E+A+V KCG+ A
Sbjct: 911 KTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTL 970
Query: 384 ----CVFGRINEK--------------NMVSWNAIIAAYVQNGRNEEALELFHCLRNQTL 425
C G + E ++VS+N +I G A EL+ ++
Sbjct: 971 MHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGF 1030
Query: 426 KPDAVTIASILPAYAELATVSECKQI-------HAYITKLELSSNT 464
+A T +++ T I +IT + LS ++
Sbjct: 1031 LANATTYKALIRGLLARETAFSGADIILKDLLARGFITSMSLSQDS 1076
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE
Length = 590
Score = 110 bits (275), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 113/534 (21%), Positives = 225/534 (42%), Gaps = 49/534 (9%)
Query: 76 MDNALYLFEKMNQ----PDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPF 131
+D+A+ LF M + P ++ ++ + F VI +M+ GI + +T+
Sbjct: 56 LDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 115
Query: 132 VIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRD 191
I R + GK++K+G I NSL++ GF ++ EA+ L D
Sbjct: 116 FINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLN-----GFCH-GNRISEAVALVD 169
Query: 192 LVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHC 251
+M+ +G +PD ++ + + G +
Sbjct: 170 -------------------------QMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVE 204
Query: 252 QVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTC----KNIVAWNAMIGGYAING 307
+++ G + D++ ++I+ K G+ D A + N+M ++V +N +I G
Sbjct: 205 RMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYK 264
Query: 308 HFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLET 367
H ++F +M+ + PD T L+ +G + + + K P LV
Sbjct: 265 HMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFN 324
Query: 368 ALVDMYGKCGQLKFAECVFGRINEK-----NMVSWNAIIAAYVQNGRNEEALELFHCLRN 422
AL+D + K G+L AE ++ + + ++V++N +I + + R EE +E+F +
Sbjct: 325 ALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQ 384
Query: 423 QTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQT 482
+ L + VT +++ + + + + + + + T N ++ G+++T
Sbjct: 385 RGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVET 444
Query: 483 ARRYFDSMSFKNL----VSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLS 538
A F+ M +++ V++ TMI A G LF + G++PN T+ +++S
Sbjct: 445 ALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMS 504
Query: 539 SCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEM 592
GL E LF MK D + Y ++ R G+ A+ + I+EM
Sbjct: 505 GFCRKGLKEEADALFVEMKEDGPLPNS-GTYNTLIRARLRDGDEAASAELIKEM 557
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 84/374 (22%), Positives = 163/374 (43%), Gaps = 42/374 (11%)
Query: 74 GAMDNALYLFEKMN----QPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTF 129
G D AL L KM + D I+N II G + D +++ME +GI D FT+
Sbjct: 229 GEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTY 288
Query: 130 PFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPL 189
+I + + ++ +++ ++ D+ N+LID + K G + AEK+++ M
Sbjct: 289 NPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEM-- 346
Query: 190 RDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEI 249
+KS CF PD ++ + + G V G E+
Sbjct: 347 -------------------VKSKHCF---------PDVVAYNTLIKGFCKYKRVEEGMEV 378
Query: 250 HCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCK----NIVAWNAMIGGYAI 305
++ + GL + + T+LI + + D A+ VF +M +I+ +N ++ G
Sbjct: 379 FREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCN 438
Query: 306 NGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVL 365
NG+ + + MQ+ ++ D +T ++ + K G + +G + K P++V
Sbjct: 439 NGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVT 498
Query: 366 ETALVDMYGKCGQLKFAECVFGRINEK----NMVSWNAIIAAYVQNGRNEEALELFHCLR 421
T ++ + + G + A+ +F + E N ++N +I A +++G + EL +R
Sbjct: 499 YTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMR 558
Query: 422 NQTLKPDAVTIASI 435
+ DA T +
Sbjct: 559 SCGFAGDASTFGLV 572
>AT2G31400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:13387201-13390550 REVERSE
Length = 918
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 96/411 (23%), Positives = 186/411 (45%), Gaps = 52/411 (12%)
Query: 73 SGAMDNALYLFEKMNQ----PDTYIWNVIIRGFSNKGL-FQEVIDFYHRMEYEGIGIDNF 127
SG + A+ +F M + P+ +N +I G+ F++V F+ M+ G+ D
Sbjct: 281 SGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRI 340
Query: 128 TFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAM 187
TF ++ C R + + + ++ +++D++ N+L+D K G +++A ++ M
Sbjct: 341 TFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQM 400
Query: 188 PLR----DLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCV 243
P++ ++VS++ +++G+ G ++L F EM LG DR+S + L SI V
Sbjct: 401 PVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLL---SIYTKV 457
Query: 244 RGGKEIHCQVIRN----GLELDIMVQTSLIDMYAKCGKVDYAERVFNEM----TCKNIVA 295
G E ++R G++ D++ +L+ Y K GK D ++VF EM N++
Sbjct: 458 -GRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLT 516
Query: 296 WNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAI 355
++ +I GY+ G + E+ + + L D + L+ + K G + +
Sbjct: 517 YSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMT 576
Query: 356 RKMFLPHLVLETALVDMYGKC------------GQLKFAECVFGRINEKNMVSWNAIIAA 403
++ P++V +++D +G+ G L F+ + E N +I
Sbjct: 577 KEGISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSALTE---TEGNRVIQL 633
Query: 404 YVQ-----NGRN----EEA-------LELFHCLRNQTLKPDAVTIASILPA 438
+ Q N R EE LE+F + +KP+ VT ++IL A
Sbjct: 634 FGQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNA 684
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/362 (21%), Positives = 167/362 (46%), Gaps = 21/362 (5%)
Query: 264 VQTSLIDMYAKCGKVDYAERVFNEMTC----KNIVAWNAMIGGYAINGHFLESFTCLKRM 319
+ +++I + GKV A+R+F + A++A+I Y +G E+ + M
Sbjct: 235 LASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSM 294
Query: 320 QEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGY---AIRKMFLPHLVLETALVDMYGKC 376
+E L P+ +T ++ +C K G +E K + + R P + +L+ + +
Sbjct: 295 KEYGLRPNLVTYNAVIDACGKGG--MEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRG 352
Query: 377 GQLKFAECVFGRIN----EKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTI 432
G + A +F + E+++ S+N ++ A + G+ + A E+ + + + P+ V+
Sbjct: 353 GLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSY 412
Query: 433 ASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSF 492
++++ +A+ E + + L ++ + + N ++ +Y K G + A M+
Sbjct: 413 STVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMAS 472
Query: 493 ----KNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNE 548
K++V++N ++ Y G ++F+ MK+ + PN T+ +L+ S GL E
Sbjct: 473 VGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKE 532
Query: 549 GWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMP---LVPTARIWGSLL 605
E+F K + + Y ++D L + G + +A I+EM + P + S++
Sbjct: 533 AMEIFREFK-SAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSII 591
Query: 606 TA 607
A
Sbjct: 592 DA 593
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 92/381 (24%), Positives = 164/381 (43%), Gaps = 51/381 (13%)
Query: 229 SMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEM 288
+MIS+LG V K I G + ++LI Y + G + A VFN M
Sbjct: 238 AMISTLGRYG---KVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSM 294
Query: 289 T----CKNIVAWNAMIGGYAING-HFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFG- 342
N+V +NA+I G F + MQ + + PD IT +LL CS+ G
Sbjct: 295 KEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGL 354
Query: 343 ------------------------TLLEGKCIHG-----YAIR-----KMFLPHLVLETA 368
TLL+ C G + I K +P++V +
Sbjct: 355 WEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYST 414
Query: 369 LVDMYGKCGQLKFAECVFGRIN----EKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQT 424
++D + K G+ A +FG + + VS+N +++ Y + GR+EEAL++ + +
Sbjct: 415 VIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVG 474
Query: 425 LKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTAR 484
+K D VT ++L Y + E K++ + + + N T + ++ Y+K G + A
Sbjct: 475 IKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAM 534
Query: 485 ---RYFDSMSFK-NLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSC 540
R F S + ++V ++ +I A +G ++ L M + GI PN T+ S++ +
Sbjct: 535 EIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAF 594
Query: 541 SISGLVNEGWELFNSMKMDYN 561
S ++ + N + ++
Sbjct: 595 GRSATMDRSADYSNGGSLPFS 615
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 69/322 (21%), Positives = 150/322 (46%), Gaps = 26/322 (8%)
Query: 365 LETALVDMYGKCGQLKFA----ECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCL 420
L +A++ G+ G++ A E F + +++A+I+AY ++G +EEA+ +F+ +
Sbjct: 235 LASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSM 294
Query: 421 RNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLE---LSSNTFTSNAIVYMYAKC 477
+ L+P+ VT +++ A + E KQ+ + +++ + + T N+++ + ++
Sbjct: 295 KEYGLRPNLVTYNAVIDACGKGGM--EFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRG 352
Query: 478 GDLQTARRYFDSMSFK----NLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTF 533
G + AR FD M+ + ++ S+NT++ A G ++ ++ ++M I PN ++
Sbjct: 353 GLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSY 412
Query: 534 VSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMP 593
+++ + +G +E LF M+ I Y ++ + + G + A + EM
Sbjct: 413 STVIDGFAKAGRFDEALNLFGEMRY-LGIALDRVSYNTLLSIYTKVGRSEEALDILREMA 471
Query: 594 LVPTAR---IWGSLL-----TASRNNNDIFFAEFAAKHILSHDNDNTGCYVLLANMYAEA 645
V + + +LL + F E +H+L N Y L + Y++
Sbjct: 472 SVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLP----NLLTYSTLIDGYSKG 527
Query: 646 GRWEDVEQIKLVMKKKGLAKTV 667
G +++ +I K GL V
Sbjct: 528 GLYKEAMEIFREFKSAGLRADV 549
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 116/265 (43%), Gaps = 12/265 (4%)
Query: 52 KRGMIKPNSLSLTRSLCEFVDSGAMDNALYLFEKMN----QPDTYIWNVIIRGFSNKGLF 107
+R ++P+ ++ L G + A LF++M + D + +N ++ G
Sbjct: 331 QRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQM 390
Query: 108 QEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSL 167
+ +M + I + ++ VI + F E + G++ +G+ D N+L
Sbjct: 391 DLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTL 450
Query: 168 IDMYFKFGFVEVAEKVFEAMPL----RDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGE 223
+ +Y K G E A + M +D+V++N ++ GY G + F EM
Sbjct: 451 LSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHV 510
Query: 224 KPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAER 283
P+ L+ + + G S G + EI + GL D+++ ++LID K G V A
Sbjct: 511 LPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVS 570
Query: 284 VFNEMT----CKNIVAWNAMIGGYA 304
+ +EMT N+V +N++I +
Sbjct: 571 LIDEMTKEGISPNVVTYNSIIDAFG 595
>AT5G65560.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:26201012-26203759 REVERSE
Length = 915
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 114/556 (20%), Positives = 235/556 (42%), Gaps = 84/556 (15%)
Query: 75 AMDNALYLFE---KMNQPDTY---------IWNVIIRGFSNKGLFQEVIDFYHRMEYEGI 122
++ +ALY+ + KMN+ + + +N ++ + GL E+ Y M + +
Sbjct: 155 SVGDALYVLDLCRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKV 214
Query: 123 GIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEK 182
+ +T+ ++ +L + E + K+++ GLD D + SLI Y + ++ A K
Sbjct: 215 CPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFK 274
Query: 183 VFEAMPL----RDLVSWNCMVNG----------------------------YRVIGDGL- 209
VF MPL R+ V++ +++G Y V+ L
Sbjct: 275 VFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLC 334
Query: 210 ------KSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIM 263
++L KEM G KP+ + + C +E+ Q++ GL +++
Sbjct: 335 GSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVI 394
Query: 264 VQTSLIDMYAKCGKVDYAERVFNEMTCK----NIVAWNAMIGGYAINGHFLESFTCLKRM 319
+LI+ Y K G ++ A V M + N +N +I GY + ++ L +M
Sbjct: 395 TYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYC-KSNVHKAMGVLNKM 453
Query: 320 QEDNLIPDAITMINLLPSCSKFGTLLEGKCIHG-----YAIRKM-----FLPHLVLETAL 369
E ++PD +T + +L++G+C G Y + + +P T++
Sbjct: 454 LERKVLPDVVT----------YNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSM 503
Query: 370 VDMYGKCGQLKFAECVFGRINEK----NMVSWNAIIAAYVQNGRNEEALELFHCLRNQTL 425
+D K +++ A +F + +K N+V + A+I Y + G+ +EA + + ++
Sbjct: 504 IDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNC 563
Query: 426 KPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARR 485
P+++T +++ + E + + K+ L T +++ K GD A
Sbjct: 564 LPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYS 623
Query: 486 YFDSM----SFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCS 541
F M + + ++ T I Y G + + ++M++NG+ P+ T+ SL+
Sbjct: 624 RFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYG 683
Query: 542 ISGLVNEGWELFNSMK 557
G N +++ M+
Sbjct: 684 DLGQTNFAFDVLKRMR 699
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 120/636 (18%), Positives = 232/636 (36%), Gaps = 144/636 (22%)
Query: 45 KQMSETPKRGMIKPNSLSLTRSLCEFVDSGAMDNALYLFEKMNQ----PDTYIWNVIIRG 100
K +E P +G + N ++ T + + +D A+ LF KM P + V+I+
Sbjct: 274 KVFNEMPLKG-CRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKS 332
Query: 101 FSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRD 160
E ++ ME GI + T+ +I + F + +++ G++++ GL +
Sbjct: 333 LCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPN 392
Query: 161 IYVCNSLIDMYFKFGFVEVAEKVFEAMPLR------------------------------ 190
+ N+LI+ Y K G +E A V E M R
Sbjct: 393 VITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNK 452
Query: 191 --------DLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCC 242
D+V++N +++G G+ + M G PD+ + S +
Sbjct: 453 MLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKR 512
Query: 243 VRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIV----AWNA 298
V ++ + + G+ ++++ T+LID Y K GKVD A + +M KN + +NA
Sbjct: 513 VEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNA 572
Query: 299 MIGGYAINGHFLES-----------------------------------FTCLKRMQEDN 323
+I G +G E+ ++ ++M
Sbjct: 573 LIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSG 632
Query: 324 LIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAE 383
PDA T + + + G LL+ + + P L ++L+ YG GQ FA
Sbjct: 633 TKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAF 692
Query: 384 CVFGRIN----EKNMVSWNAIIAAYV------QNGRNEE------------ALELFHCLR 421
V R+ E + ++ ++I + Q G E +EL +
Sbjct: 693 DVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMV 752
Query: 422 NQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLE-LSSNTFTSNAIVYMYAKCGDL 480
++ P+A + ++ E+ + +++ ++ + E +S + NA++ K
Sbjct: 753 EHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKH 812
Query: 481 QTARRYFDSM------------------------------SFKNLV---------SWNTM 501
A + D M F+NL+ +W +
Sbjct: 813 NEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKII 872
Query: 502 IMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLL 537
I G +LF+ M++NG + + T+ L+
Sbjct: 873 IDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLI 908
>AT5G39980.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:16001036-16003072 REVERSE
Length = 678
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 98/428 (22%), Positives = 186/428 (43%), Gaps = 27/428 (6%)
Query: 274 KCGKVDYAERVFNEMTCKNIV----AWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAI 329
+ + D A +F+EM + + ++ +I + G F + + L++M++D + D +
Sbjct: 167 RAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLV 226
Query: 330 TMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRI 389
NL+ + + I R P LV +++++YGK + A + +
Sbjct: 227 LYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEM 286
Query: 390 NE----KNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATV 445
NE N VS++ +++ YV+N + EAL +F ++ D T ++ Y +L V
Sbjct: 287 NEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMV 346
Query: 446 SECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFK----NLVSWNTM 501
E ++ + K+++ N + N I+ +Y + A F M K N+V++NTM
Sbjct: 347 KEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTM 406
Query: 502 IMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMD-Y 560
I Y + L M+ GIEPN T+ +++S +G ++ LF ++
Sbjct: 407 IKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGV 466
Query: 561 NIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPL---VPTARIWGSLLTASRNNND--IF 615
ID + Y M+ R G + AK+ + E+ L +P L A R +F
Sbjct: 467 EIDQVL--YQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAITILAKAGRTEEATWVF 524
Query: 616 FAEFAAKHILSHDNDNTGCYVLLANMYAEAGRWEDVEQIKLVMKKKGL--AKTVDCCTVE 673
F + + D GC + N+Y+ R+ +V ++ M+ G V +
Sbjct: 525 RQAFESGEV--KDISVFGCMI---NLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLN 579
Query: 674 SKGKSQKF 681
+ GK ++F
Sbjct: 580 AYGKQREF 587
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 107/498 (21%), Positives = 215/498 (43%), Gaps = 86/498 (17%)
Query: 58 PNSLSLTRSLCEFVDSGAMDNALYLFEKMNQ----PDTYIWNVIIRGFSNKGLFQEVIDF 113
P+ + L + + D A LF++M Q PD Y ++ +I F +G+F + +
Sbjct: 153 PSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSW 212
Query: 114 YHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFK 173
+ME + + D + +I+ RL + + + +L + G+ D+ NS+I++Y K
Sbjct: 213 LQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGK 272
Query: 174 FGFVEVA----EKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLS 229
A +++ EA L + VS++ +++ Y L++L F EM
Sbjct: 273 AKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEM----------- 321
Query: 230 MISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVF---N 286
KE++C LD+ +ID+Y + V A+R+F
Sbjct: 322 -----------------KEVNCA-------LDLTTCNIMIDVYGQLDMVKEADRLFWSLR 357
Query: 287 EMTCK-NIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLL 345
+M + N+V++N ++ Y F E+ + MQ ++ + +T + T++
Sbjct: 358 KMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVT----------YNTMI 407
Query: 346 EGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYV 405
+ I+G + +LV E R E N ++++ II+ +
Sbjct: 408 K---IYGKTMEHEKATNLVQEMQ------------------SRGIEPNAITYSTIISIWG 446
Query: 406 QNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTF 465
+ G+ + A LF LR+ ++ D V +++ AY + + K++ + +L+L N
Sbjct: 447 KAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRL---LHELKLPDNIP 503
Query: 466 TSNAIVYMYAKCGDLQTA----RRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRM 521
AI + AK G + A R+ F+S K++ + MI Y+ + I++F +M
Sbjct: 504 RETAITIL-AKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKM 562
Query: 522 KQNGIEPNESTFVSLLSS 539
+ G P+ + +L++
Sbjct: 563 RTAGYFPDSNVIAMVLNA 580
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 80/409 (19%), Positives = 177/409 (43%), Gaps = 26/409 (6%)
Query: 52 KRGMIKPNSLSLTRSLCEFVDSGAMDNALYLFEKMNQP----DTYIWNVIIRGFSNKGLF 107
++ + P+ + + + F G D+AL +KM Q D +++ +I +
Sbjct: 182 RQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDY 241
Query: 108 QEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSL 167
+ I + R++ GI D + +I G+ F E + + ++ + G+ + ++L
Sbjct: 242 SKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTL 301
Query: 168 IDMYFK-FGFVEVAEKVFEAMP----LRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLG 222
+ +Y + F+E A VF M DL + N M++ Y + ++ F + +
Sbjct: 302 LSVYVENHKFLE-ALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMD 360
Query: 223 EKPDRLSMISSLGGCSIGCCVRGGKEIHCQVI--RNGLELDIMVQTSLIDMYAKCGKVDY 280
+P+ +S + L G G+ IH + R +E +++ ++I +Y K + +
Sbjct: 361 IEPNVVSYNTILR--VYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEK 418
Query: 281 AERVFNEMTCK----NIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLP 336
A + EM + N + ++ +I + G + T ++++ + D + ++
Sbjct: 419 ATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIV 478
Query: 337 SCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINE----K 392
+ + G + K + + ++ LP + + + K G+ + A VF + E K
Sbjct: 479 AYERVGLMGHAKRL----LHELKLPDNIPRETAITILAKAGRTEEATWVFRQAFESGEVK 534
Query: 393 NMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAE 441
++ + +I Y +N R +E+F +R PD+ IA +L AY +
Sbjct: 535 DISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGK 583
>AT1G31790.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11394744-11395973 REVERSE
Length = 409
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 132/277 (47%), Gaps = 10/277 (3%)
Query: 53 RGMIKPNSLSLTRSLCEFVDSGAMDNALYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVID 112
+ I+P + R L V G +D +F++M D + W ++ G G +++
Sbjct: 116 KSSIRPTITFINRLLLMHVSCGRLDITRQMFDRMPHRDFHSWAIVFLGCIEMGDYEDAAF 175
Query: 113 FYHRM----EYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGL--DRDIYVCNS 166
+ M + I ++ V+KAC + F GK+VH K+G + D Y+ S
Sbjct: 176 LFVSMLKHSQKGAFKIPSWILGCVLKACAMIRDFELGKQVHALCHKLGFIDEEDSYLSGS 235
Query: 167 LIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMV-NGYRVIGDGLKSLMCFKEMLGLGEKP 225
LI Y +F +E A V + + V+W V N YR G+ + + F EM G K
Sbjct: 236 LIRFYGEFRCLEDANLVLHQLSNANTVAWAAKVTNDYRE-GEFQEVIRDFIEMGNHGIKK 294
Query: 226 DRLSMISSLGGCS-IGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERV 284
+ + L CS + R G+++H I+ G E D +++ LI+MY K GKV AE+V
Sbjct: 295 NVSVFSNVLKACSWVSDGGRSGQQVHANAIKLGFESDCLIRCRLIEMYGKYGKVKDAEKV 354
Query: 285 FNEMTCKNIVA-WNAMIGGYAINGHFLESFTCLKRMQ 320
F + V+ WNAM+ Y NG ++E+ L +M+
Sbjct: 355 FKSSKDETSVSCWNAMVASYMQNGIYIEAIKLLYQMK 391
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 139/290 (47%), Gaps = 12/290 (4%)
Query: 147 KVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIG 206
+VH ++K + I N L+ M+ G +++ ++F+ MP RD SW + G +G
Sbjct: 111 QVH--IMKSSIRPTITFINRLLLMHVSCGRLDITRQMFDRMPHRDFHSWAIVFLGCIEMG 168
Query: 207 DGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCC--VRG---GKEIHCQVIRNGL--E 259
D + F ML +K + S + GC + C +R GK++H + G E
Sbjct: 169 DYEDAAFLFVSMLKHSQKG-AFKIPSWILGCVLKACAMIRDFELGKQVHALCHKLGFIDE 227
Query: 260 LDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRM 319
D + SLI Y + ++ A V ++++ N VAW A + G F E M
Sbjct: 228 EDSYLSGSLIRFYGEFRCLEDANLVLHQLSNANTVAWAAKVTNDYREGEFQEVIRDFIEM 287
Query: 320 QEDNLIPDAITMINLLPSCSKFGTL-LEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQ 378
+ + N+L +CS G+ +H AI+ F ++ L++MYGK G+
Sbjct: 288 GNHGIKKNVSVFSNVLKACSWVSDGGRSGQQVHANAIKLGFESDCLIRCRLIEMYGKYGK 347
Query: 379 LKFAECVFGRINEKNMVS-WNAIIAAYVQNGRNEEALELFHCLRNQTLKP 427
+K AE VF ++ VS WNA++A+Y+QNG EA++L + ++ +K
Sbjct: 348 VKDAEKVFKSSKDETSVSCWNAMVASYMQNGIYIEAIKLLYQMKATGIKA 397
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 137/296 (46%), Gaps = 8/296 (2%)
Query: 244 RGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGY 303
RG E+ ++++ + I L+ M+ CG++D ++F+ M ++ +W + G
Sbjct: 105 RGAHELQVHIMKSSIRPTITFINRLLLMHVSCGRLDITRQMFDRMPHRDFHSWAIVFLGC 164
Query: 304 AINGHFLES----FTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMF 359
G + ++ + LK Q+ + + +L +C+ GK +H + F
Sbjct: 165 IEMGDYEDAAFLFVSMLKHSQKGAFKIPSWILGCVLKACAMIRDFELGKQVHALCHKLGF 224
Query: 360 LPH--LVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELF 417
+ L +L+ YG+ L+ A V +++ N V+W A + + G +E + F
Sbjct: 225 IDEEDSYLSGSLIRFYGEFRCLEDANLVLHQLSNANTVAWAAKVTNDYREGEFQEVIRDF 284
Query: 418 HCLRNQTLKPDAVTIASILPAYAELATVSEC-KQIHAYITKLELSSNTFTSNAIVYMYAK 476
+ N +K + +++L A + ++ +Q+HA KL S+ ++ MY K
Sbjct: 285 IEMGNHGIKKNVSVFSNVLKACSWVSDGGRSGQQVHANAIKLGFESDCLIRCRLIEMYGK 344
Query: 477 CGDLQTARRYFDSMSFKNLVS-WNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNES 531
G ++ A + F S + VS WN M+ +Y +G +I+L +MK GI+ +++
Sbjct: 345 YGKVKDAEKVFKSSKDETSVSCWNAMVASYMQNGIYIEAIKLLYQMKATGIKAHDT 400
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 123/283 (43%), Gaps = 19/283 (6%)
Query: 361 PHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAIIAAYVQNGRNEEALELFHCL 420
P + L+ M+ CG+L +F R+ ++ SW + ++ G E+A LF +
Sbjct: 121 PTITFINRLLLMHVSCGRLDITRQMFDRMPHRDFHSWAIVFLGCIEMGDYEDAAFLFVSM 180
Query: 421 RNQT----LKPDAVTIASILPAYAELATVSECKQIHAYITKLEL--SSNTFTSNAIVYMY 474
+ K + + +L A A + KQ+HA KL +++ S +++ Y
Sbjct: 181 LKHSQKGAFKIPSWILGCVLKACAMIRDFELGKQVHALCHKLGFIDEEDSYLSGSLIRFY 240
Query: 475 AKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFV 534
+ L+ A +S N V+W + G I+ F M +GI+ N S F
Sbjct: 241 GEFRCLEDANLVLHQLSNANTVAWAAKVTNDYREGEFQEVIRDFIEMGNHGIKKNVSVFS 300
Query: 535 SLLSSCS-ISGLVNEGWELF-NSMKMDYNIDYGIEHYGC-MVDLLGRTGNLDAAKQFIEE 591
++L +CS +S G ++ N++K+ + D I C ++++ G+ G + A++ +
Sbjct: 301 NVLKACSWVSDGGRSGQQVHANAIKLGFESDCLIR---CRLIEMYGKYGKVKDAEKVFKS 357
Query: 592 MPLVPTARIWGSLLTASRNNNDIFFA------EFAAKHILSHD 628
+ W +++ AS N I+ + A I +HD
Sbjct: 358 SKDETSVSCWNAMV-ASYMQNGIYIEAIKLLYQMKATGIKAHD 399
>AT2G16880.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:7312262-7314493 REVERSE
Length = 743
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 121/543 (22%), Positives = 242/543 (44%), Gaps = 33/543 (6%)
Query: 53 RGMIKPNSLS---LTRSLCEFVDSGAMDNALYLFEKMNQ----PDTYIWNVIIRGFSNKG 105
R +KPN L+ L L + S ++ +A +F+ M + + +NV++ G+ +G
Sbjct: 159 RLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEG 218
Query: 106 LFQEVIDFYHRMEYE-GIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVC 164
++ + RM E + DN T+ ++KA + + K++ + K GL +
Sbjct: 219 KLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTY 278
Query: 165 NSLIDMYFKFGFVEVAEKVFEAMP----LRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLG 220
N+L+ Y K G ++ A ++ E M L DL ++N ++NG G + L M
Sbjct: 279 NNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKS 338
Query: 221 LGEKPDRLSMISSLGGC-SIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVD 279
L +PD ++ + + GC +G + K + Q+ +G++ + + + K K +
Sbjct: 339 LKLQPDVVTYNTLIDGCFELGLSLEARKLME-QMENDGVKANQVTHNISLKWLCKEEKRE 397
Query: 280 YAERVFNEMT-----CKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINL 334
R E+ +IV ++ +I Y G + ++ M + + + IT+ +
Sbjct: 398 AVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTI 457
Query: 335 LPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINE--- 391
L + K L E + A ++ F+ V L+ + + +++ A ++ + +
Sbjct: 458 LDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKI 517
Query: 392 -KNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQ 450
+ ++N++I +G+ E A+E F L L PD T SI+ Y + V + +
Sbjct: 518 TPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFE 577
Query: 451 IHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFK---NLVSWNTMIMAYAI 507
+ K + +T N ++ K G + A +F+++ + + V++NTMI A+
Sbjct: 578 FYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREVDTVTYNTMISAFCK 637
Query: 508 HGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWEL-------FNSMKMDY 560
+ L S M++ G+EP+ T+ S +S G ++E EL F SMK D
Sbjct: 638 DKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKFSGKFGSMKRDL 697
Query: 561 NID 563
++
Sbjct: 698 QVE 700
>AT1G12700.1 | Symbols: | helicase domain-containing protein /
pentatricopeptide (PPR) repeat-containing protein |
chr1:4322913-4326197 REVERSE
Length = 828
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 107/501 (21%), Positives = 214/501 (42%), Gaps = 20/501 (3%)
Query: 77 DNALYLFEKMNQ----PDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFV 132
D+A+ LF++M + P ++ + F V+DF ++E GI + +T +
Sbjct: 60 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 119
Query: 133 IKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVA----EKVFEAMP 188
I R V GK++K+G + D N+LI F G V A +++ E
Sbjct: 120 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 179
Query: 189 LRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKE 248
D+V++N +VNG GD +L ++M K D + + + C+
Sbjct: 180 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 239
Query: 249 IHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCK----NIVAWNAMIGGYA 304
+ ++ G++ ++ SL+ K GK + + +M + N++ +N ++ +
Sbjct: 240 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFV 299
Query: 305 INGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLV 364
G E+ K M + P+ IT L+ L E + +R P +V
Sbjct: 300 KEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIV 359
Query: 365 LETALVDMYGKCGQLKFAECVFGRINEK----NMVSWNAIIAAYVQNGRNEEALELFHCL 420
T+L+ Y ++ VF I+++ N V+++ ++ + Q+G+ + A ELF +
Sbjct: 360 TFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEM 419
Query: 421 RNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDL 480
+ + PD +T +L + + + +I + K ++ I+ K G +
Sbjct: 420 VSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKV 479
Query: 481 QTARRYFDSMSFK----NLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSL 536
+ A F S+ K N++++ MI G + + L +M+++G PN+ T+ +L
Sbjct: 480 EDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTL 539
Query: 537 LSSCSISGLVNEGWELFNSMK 557
+ + G + +L MK
Sbjct: 540 IRAHLRDGDLTASAKLIEEMK 560
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/355 (20%), Positives = 161/355 (45%), Gaps = 15/355 (4%)
Query: 252 QVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMT---CK-NIVAWNAMIGGYAING 307
+V++ G E D +LI GKV A + + M C+ ++V +N+++ G +G
Sbjct: 138 KVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSG 197
Query: 308 HFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLET 367
+ L++M+E N+ D T ++ S + G + + K +V
Sbjct: 198 DTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYN 257
Query: 368 ALVDMYGKCGQLKFAECVFGRINEK----NMVSWNAIIAAYVQNGRNEEALELFHCLRNQ 423
+LV K G+ + + + N++++N ++ +V+ G+ +EA EL+ + +
Sbjct: 258 SLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITR 317
Query: 424 TLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTA 483
+ P+ +T +++ Y +SE + + + + S + T +++ Y +
Sbjct: 318 GISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDG 377
Query: 484 RRYFDSMSFKNLVSWNTMIMAYAIHGF---GTISI--QLFSRMKQNGIEPNESTFVSLLS 538
+ F ++S + LV+ N + + + GF G I + +LF M +G+ P+ T+ LL
Sbjct: 378 MKVFRNISKRGLVA-NAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLD 436
Query: 539 SCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMP 593
+G + + E+F ++ +D GI Y +++ + + G ++ A +P
Sbjct: 437 GLCDNGKLEKALEIFEDLQ-KSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLP 490
>AT2G18940.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:8203873-8206341 REVERSE
Length = 822
Score = 106 bits (265), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 103/488 (21%), Positives = 197/488 (40%), Gaps = 20/488 (4%)
Query: 88 QPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKK 147
+P T +N +++ F G++ E + ME D+ T+ ++ A R E
Sbjct: 313 EPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAG 372
Query: 148 VHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVN------G 201
V + K G+ + ++ID Y K G + A K+F +M V C N G
Sbjct: 373 VIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLG 432
Query: 202 YRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELD 261
+ + + ++C +M G P+R + + L C + + ++ G E D
Sbjct: 433 KKSRSNEMIKMLC--DMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPD 490
Query: 262 IMVQTSLIDMYAKCGKVDYAERVFNEMTCKN----IVAWNAMIGGYAINGHFLESFTCLK 317
+LI Y +CG A +++ EMT + +NA++ A G + +
Sbjct: 491 RDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVIS 550
Query: 318 RMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCG 377
M+ P + +L +K G L + I P +L L+ KC
Sbjct: 551 DMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCR 610
Query: 378 QLKFAECVFGRINE----KNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIA 433
L +E F + +MV +N++++ + +N ++A + +R L PD VT
Sbjct: 611 ALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYN 670
Query: 434 SILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFK 493
S++ Y + ++I + K +L + + N ++ + + G +Q A R M+ +
Sbjct: 671 SLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTER 730
Query: 494 NL----VSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEG 549
+ ++NT + Y G + M +N PNE TF ++ +G +E
Sbjct: 731 GIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEA 790
Query: 550 WELFNSMK 557
+ + +K
Sbjct: 791 MDFVSKIK 798
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/346 (22%), Positives = 151/346 (43%), Gaps = 14/346 (4%)
Query: 260 LDIMVQTSLIDMYAKCGKVDYAERVFNEM----TCKNIVAWNAMIGGYAINGH-FLESFT 314
LD+ T+++ Y++ GK + A +F M +V +N ++ + G + +
Sbjct: 208 LDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILG 267
Query: 315 CLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYG 374
L M+ L D T +L +C++ G L E K + P V AL+ ++G
Sbjct: 268 VLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFG 327
Query: 375 KCGQLKFAECVFGRINEK----NMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAV 430
K G A V + E + V++N ++AAYV+ G ++EA + + + + P+A+
Sbjct: 328 KAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAI 387
Query: 431 TIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSM 490
T +++ AY + E ++ + + NT T NA++ + K + M
Sbjct: 388 TYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDM 447
Query: 491 SFK----NLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLV 546
N +WNTM+ G ++F MK G EP+ TF +L+S+ G
Sbjct: 448 KSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSE 507
Query: 547 NEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEM 592
+ +++ M + + Y +++ L R G+ + + I +M
Sbjct: 508 VDASKMYGEM-TRAGFNACVTTYNALLNALARKGDWRSGENVISDM 552
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 104/530 (19%), Positives = 212/530 (40%), Gaps = 75/530 (14%)
Query: 28 KRDLLVNPRIRKSNPTKKQMSETPKRGMIKPNSLSLTRSLCEFVDSGAMDNALYLFEKMN 87
K +LVN + + + ++ K +++ + +SL + L DSG + A++LFE
Sbjct: 107 KEVVLVNSIVEQPLTGLSRFFDSVKSELLRTDLVSLVKGL---DDSGHWERAVFLFE--- 160
Query: 88 QPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKK 147
W V+ SN G + +D+ ++ GR + K
Sbjct: 161 ------WLVLS---SNSG---------------ALKLDHQVIEIFVRILGRESQYSVAAK 196
Query: 148 VHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAM----PLRDLVSWNCMVNGYR 203
+ K+ D+ +++ Y + G E A +FE M P LV++N +++ +
Sbjct: 197 LLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFG 256
Query: 204 VIGDGLKSLM-CFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDI 262
+G + ++ EM G K D + + L C+ +R KE ++ G E
Sbjct: 257 KMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYE--- 313
Query: 263 MVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQED 322
V +NA++ + G + E+ + LK M+E+
Sbjct: 314 ----------------------------PGTVTYNALLQVFGKAGVYTEALSVLKEMEEN 345
Query: 323 NLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFA 382
+ D++T L+ + + G E + +K +P+ + T ++D YGK G+ A
Sbjct: 346 SCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEA 405
Query: 383 ECVFGRINE----KNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPA 438
+F + E N ++NA+++ + R+ E +++ +++ P+ T ++L
Sbjct: 406 LKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLAL 465
Query: 439 YAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKN---- 494
++ + + T N ++ Y +CG A + + M+
Sbjct: 466 CGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNAC 525
Query: 495 LVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISG 544
+ ++N ++ A A G + S MK G +P E+++ SL+ C G
Sbjct: 526 VTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSY-SLMLQCYAKG 574
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 78/395 (19%), Positives = 158/395 (40%), Gaps = 52/395 (13%)
Query: 89 PDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKV 148
P+ WN ++ NKG+ + V + M+ G D TF +I A GR S ++ K+
Sbjct: 454 PNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKM 513
Query: 149 HGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDG 208
+G++ + G + + N+L++ + G W +G VI D
Sbjct: 514 YGEMTRAGFNACVTTYNALLNALARKG------------------DWR---SGENVISD- 551
Query: 209 LKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLE-----LDIM 263
M G KP S + C +GG + + I N ++ M
Sbjct: 552 ---------MKSKGFKPTETSY-----SLMLQCYAKGGNYLGIERIENRIKEGQIFPSWM 597
Query: 264 VQTSLIDMYAKCGKVDYAERVFNEMT----CKNIVAWNAMIGGYAINGHFLESFTCLKRM 319
+ +L+ KC + +ER F ++V +N+M+ + N + ++ L+ +
Sbjct: 598 LLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESI 657
Query: 320 QEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQL 379
+ED L PD +T +L+ + G + + I + P LV ++ + + G +
Sbjct: 658 REDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLM 717
Query: 380 KFAECVFGRINEKN----MVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASI 435
+ A + + E+ + ++N ++ Y G E ++ C+ +P+ +T +
Sbjct: 718 QEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMV 777
Query: 436 LPAYAELATVSECKQIHAYITKLELSSNTFTSNAI 470
+ Y SE +++K++ F +I
Sbjct: 778 VDGYCRAGKYSEAMD---FVSKIKTFDPCFDDQSI 809
>AT4G31850.1 | Symbols: PGR3 | PGR3 (PROTON GRADIENT REGULATION 3) |
chr4:15403020-15406358 FORWARD
Length = 1112
Score = 106 bits (264), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 141/672 (20%), Positives = 287/672 (42%), Gaps = 71/672 (10%)
Query: 58 PNSLSLTRSLCEFVDSGAMDNALYLFEKM----NQPDTYIWNVIIRGFSNKGLFQEVIDF 113
P+ ++ T + + +D A +FEKM ++PD + ++ FS+ V F
Sbjct: 291 PDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQF 350
Query: 114 YHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFK 173
+ ME +G D TF ++ A + +F E + G+ +++ N+LI +
Sbjct: 351 WSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLR 410
Query: 174 FGFVEVAEKVF---EAMPLRDLV-SWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLS 229
++ A ++F E++ ++ ++ ++ Y GD + +L F++M G P+ ++
Sbjct: 411 VHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVA 470
Query: 230 MISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMT 289
+SL + R K+I + GL D + ++ Y+K G++D A ++ +EM
Sbjct: 471 CNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMM 530
Query: 290 ---CK-NIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLL 345
C+ +++ N++I E++ RM+E L P +T LL K G +
Sbjct: 531 ENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQ 590
Query: 346 EGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINE----KNMVSWNAII 401
E + ++K P+ + L D K ++ A + ++ + ++ ++N II
Sbjct: 591 EAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTII 650
Query: 402 AAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKL--- 458
V+NG+ +EA+ FH ++ + + PD VT+ ++LP + + + + +I IT
Sbjct: 651 FGLVKNGQVKEAMCFFHQMK-KLVYPDFVTLCTLLPGVVKASLIEDAYKI---ITNFLYN 706
Query: 459 --ELSSNTFTSNAIVYMYAKCG-----------------------------------DLQ 481
+ +N F + I + A+ G ++
Sbjct: 707 CADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVS 766
Query: 482 TARRYFDSMS-----FKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSL 536
AR F+ + L ++N +I I+ +F ++K G P+ +T+ L
Sbjct: 767 GARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFL 826
Query: 537 LSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAA----KQFIEEM 592
L + SG ++E +EL+ M I H ++ L + GN+D A + +
Sbjct: 827 LDAYGKSGKIDELFELYKEMSTHECEANTITH-NIVISGLVKAGNVDDALDLYYDLMSDR 885
Query: 593 PLVPTARIWGSLLTASRNNNDIFFAEFAAKHILSHD-NDNTGCYVLLANMYAEAGRWEDV 651
PTA +G L+ + ++ A+ + +L + N Y +L N + +AG +
Sbjct: 886 DFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAA 945
Query: 652 EQIKLVMKKKGL 663
+ M K+G+
Sbjct: 946 CALFKRMVKEGV 957
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 125/615 (20%), Positives = 243/615 (39%), Gaps = 77/615 (12%)
Query: 45 KQMSETPKRGMIKPNSLSLTRSLCEFVDSGAMDNALYLFEKMNQ----PDTYIWNVIIRG 100
K++ E K G KP+ ++ L F D+ +D+ + +M + PD + +++
Sbjct: 313 KEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDA 372
Query: 101 FSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRD 160
G F E D M +GI + T+ +I R+ + ++ G + +G+
Sbjct: 373 LCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPT 432
Query: 161 IYVCNSLIDMYFKFGFVEVAEKVFEAMPLR----DLVSWNCMVNGYRVIGDGLKSLMCFK 216
Y ID Y K G A + FE M + ++V+ N + G ++ F
Sbjct: 433 AYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFY 492
Query: 217 EMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCG 276
+ +G PD ++ + S + ++ +++ NG E D++V SLI+ K
Sbjct: 493 GLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKAD 552
Query: 277 KVDYAERVF---NEMTCK-NIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMI 332
+VD A ++F EM K +V +N ++ G NG E+ + M + P+ IT
Sbjct: 553 RVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTIT-- 610
Query: 333 NLLPSCSKFGTLLEGKCIHG---YAIRKMF-------LPHLVLETALVDMYGKCGQLKFA 382
F TL + C + A++ +F +P + ++ K GQ+K A
Sbjct: 611 --------FNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEA 662
Query: 383 ECVFGRINE---KNMVSWNAIIAAYVQNGRNEEALE-----LFHC--------------- 419
C F ++ + + V+ ++ V+ E+A + L++C
Sbjct: 663 MCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGS 722
Query: 420 -----------------LRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITK-LELS 461
+ N + + I+ + VS + + TK L +
Sbjct: 723 ILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQ 782
Query: 462 SNTFTSNAIVYMYAKCGDLQTARRYF----DSMSFKNLVSWNTMIMAYAIHGFGTISIQL 517
T N ++ + ++ A+ F + ++ ++N ++ AY G +L
Sbjct: 783 PKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFEL 842
Query: 518 FSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLG 577
+ M + E N T ++S +G V++ +L+ + D + YG ++D L
Sbjct: 843 YKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLS 902
Query: 578 RTGNLDAAKQFIEEM 592
++G L AKQ E M
Sbjct: 903 KSGRLYEAKQLFEGM 917
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 104/513 (20%), Positives = 196/513 (38%), Gaps = 71/513 (13%)
Query: 88 QPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKK 147
+P ++ ++ G + V+ ME G+ + +TF I+ GR E +
Sbjct: 220 RPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYE 279
Query: 148 VHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGD 207
+ ++ G D+ LID ++ A++VFE M
Sbjct: 280 ILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGR---------------- 323
Query: 208 GLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTS 267
KPDR++ I+ L S + K+ ++ ++G D++ T
Sbjct: 324 ---------------HKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTI 368
Query: 268 LIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPD 327
L+D K G+F E+F L M++ ++P+
Sbjct: 369 LVDALCKA-------------------------------GNFGEAFDTLDVMRDQGILPN 397
Query: 328 AITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFG 387
T L+ + L + + G P +D YGK G A F
Sbjct: 398 LHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFE 457
Query: 388 RINEK----NMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELA 443
++ K N+V+ NA + + + GR+ EA ++F+ L++ L PD+VT ++ Y+++
Sbjct: 458 KMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVG 517
Query: 444 TVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNL----VSWN 499
+ E ++ + + + + N+++ K + A + F M L V++N
Sbjct: 518 EIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYN 577
Query: 500 TMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMD 559
T++ +G +I+LF M Q G PN TF +L + V ++ M MD
Sbjct: 578 TLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKM-MD 636
Query: 560 YNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEM 592
+ Y ++ L + G + A F +M
Sbjct: 637 MGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQM 669
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 105/508 (20%), Positives = 208/508 (40%), Gaps = 78/508 (15%)
Query: 82 LFEKMNQ---PDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGR 138
LF+ M+ PD + +N II G G +E + F+H+M+ +P + C
Sbjct: 631 LFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMK-------KLVYPDFVTLCTL 683
Query: 139 LLSFIEGKKVHG--KLIKIGL------DRDIYVCNSLIDMYFKFGF---VEVAEKVFEAM 187
L ++ + K+I L +++ + + + + G V +E++
Sbjct: 684 LPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANG 743
Query: 188 PLRD-------LVSWNCM---VNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGC 237
RD ++ ++C V+G R + + F + LG+ K +++ +GG
Sbjct: 744 ICRDGDSILVPIIRYSCKHNNVSGARTLFEK------FTKDLGVQPKLPTYNLL--IGGL 795
Query: 238 SIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTC----KNI 293
+ +++ QV G D+ L+D Y K GK+D ++ EM+ N
Sbjct: 796 LEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANT 855
Query: 294 VAWNAMIGGYAINGHFLESFTCLKRMQED-NLIPDAITMINLLPSCSKFGTLLEGKCIHG 352
+ N +I G G+ ++ + D + P A T L+ SK G L E K +
Sbjct: 856 ITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFE 915
Query: 353 YAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEK----NMVSWNAIIAAYVQNG 408
+ P+ + L++ +GK G+ A +F R+ ++ ++ +++ ++ G
Sbjct: 916 GMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVG 975
Query: 409 RNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSN 468
R +E L F L+ L PD V I+ + + E L L + TS
Sbjct: 976 RVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEA---------LVLFNEMKTSR 1026
Query: 469 AIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEP 528
I +L ++N++I+ I G + ++++ +++ G+EP
Sbjct: 1027 GIT---------------------PDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEP 1065
Query: 529 NESTFVSLLSSCSISGLVNEGWELFNSM 556
N TF +L+ S+SG + ++ +M
Sbjct: 1066 NVFTFNALIRGYSLSGKPEHAYAVYQTM 1093
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 114/567 (20%), Positives = 230/567 (40%), Gaps = 75/567 (13%)
Query: 58 PNSLSLTRSLCEFVDSGAMDNALYLFEKMNQ----PDTYIWNVIIRGFSNKGLFQEVIDF 113
P+S++ + + G +D A+ L +M + PD + N +I E
Sbjct: 501 PDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKM 560
Query: 114 YHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFK 173
+ RM+ + T+ ++ G+ E ++ +++ G + N+L D K
Sbjct: 561 FMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCK 620
Query: 174 FGFVEVAEK-VFEAMPL---RDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLS 229
V +A K +F+ M + D+ ++N ++ G V +K MCF + PD ++
Sbjct: 621 NDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGL-VKNGQVKEAMCFFHQMKKLVYPDFVT 679
Query: 230 MISSLGGCSIGCCVRGGKEIHCQVIRNGLE--LDIMVQTSLIDMYAKCG---KVDYAERV 284
+ + L G + +I + N + ++ + + + A+ G V ++ER+
Sbjct: 680 LCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERL 739
Query: 285 FNEMTCKNIVAWNAMIGGYAINGHFLE-SFTCLKRMQEDNLIPDAITMINLLPSCSKFGT 343
C++ + I Y+ + + + T ++ +D + + NLL G
Sbjct: 740 VANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLL-----IGG 794
Query: 344 LLEGKCIHGYAIRKMFL--------PHLVLETALVDMYGKCGQLKFAECVFGRIN----E 391
LLE I + +FL P + L+D YGK G++ ++ ++ E
Sbjct: 795 LLEADMIE--IAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECE 852
Query: 392 KNMVSWNAIIAAYVQNGRNEEALELFHCL-RNQTLKPDAVTIASILPAYAELATVSECKQ 450
N ++ N +I+ V+ G ++AL+L++ L ++ P A T ++ ++ + E KQ
Sbjct: 853 ANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQ 912
Query: 451 IHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMS------------------- 491
+ + N N ++ + K G+ A F M
Sbjct: 913 LFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLC 972
Query: 492 -----------FKNL--VSWNTMIMAY--AIHGFGTI-----SIQLFSRMKQN-GIEPNE 530
FK L N ++ Y I+G G ++ LF+ MK + GI P+
Sbjct: 973 MVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDL 1032
Query: 531 STFVSLLSSCSISGLVNEGWELFNSMK 557
T+ SL+ + I+G+V E +++N ++
Sbjct: 1033 YTYNSLILNLGIAGMVEEAGKIYNEIQ 1059
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 120/280 (42%), Gaps = 30/280 (10%)
Query: 73 SGAMDNALYLFEKMN----QPDTYIWNVIIRGFSNKGLFQEVIDFYHR-MEYEGIGIDNF 127
SG +D L+++M+ + +T N++I G G + +D Y+ M
Sbjct: 833 SGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTAC 892
Query: 128 TFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAM 187
T+ +I + E K++ ++ G + + N LI+ + K G + A +F+ M
Sbjct: 893 TYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRM 952
Query: 188 PLR----DLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLS---MISSLGGCSIG 240
DL +++ +V+ ++G + L FKE+ G PD + +I+ LG
Sbjct: 953 VKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLG----- 1007
Query: 241 CCVRGGKEIHCQVIRN------GLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTC---- 290
+ + V+ N G+ D+ SLI G V+ A +++NE+
Sbjct: 1008 ---KSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLE 1064
Query: 291 KNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAIT 330
N+ +NA+I GY+++G ++ + M P+ T
Sbjct: 1065 PNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGT 1104
>AT1G63130.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23412854-23414746 FORWARD
Length = 630
Score = 106 bits (264), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 115/547 (21%), Positives = 238/547 (43%), Gaps = 41/547 (7%)
Query: 76 MDNALYLFEKMNQ----PDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPF 131
+D+A+ LF M + P ++ ++ + F VI +M+ GI + +T+
Sbjct: 62 LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 121
Query: 132 VIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGF---------VEVAEK 182
+I R V K++K+G + DI NSL++ GF V + +
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLN-----GFCHGNRISDAVSLVGQ 176
Query: 183 VFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCC 242
+ E D ++N +++G +++ M+ G +PD + + G G C
Sbjct: 177 MVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPD----LVTYGIVVNGLC 232
Query: 243 VRGGKEIHCQVIR----NGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCK----NIV 294
RG ++ +++ +E +++ ++ID V+ A +F EM K N+V
Sbjct: 233 KRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVV 292
Query: 295 AWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYA 354
+N++I G + ++ L M E + P+ +T L+ + K G L+E + ++
Sbjct: 293 TYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 352
Query: 355 IRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEK----NMVSWNAIIAAYVQNGRN 410
I++ P + ++L++ + +L A+ +F + K N+V++N +I + + R
Sbjct: 353 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRV 412
Query: 411 EEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAI 470
+E +ELF + + L + VT +++ + + + + + + + T + +
Sbjct: 413 DEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSIL 472
Query: 471 VYMYAKCGDLQTARRYFDSMSFK----NLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGI 526
+ G ++TA F+ + ++ ++N MI G LF + G+
Sbjct: 473 LDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGV 532
Query: 527 EPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNI-DYGIEHYGCMVDLLGRTGNLDAA 585
+PN T+ +++S GL E LF MK + + D G Y ++ R G+ A+
Sbjct: 533 KPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGT--YNTLIRAHLRDGDKAAS 590
Query: 586 KQFIEEM 592
+ I EM
Sbjct: 591 AELIREM 597
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 86/403 (21%), Positives = 181/403 (44%), Gaps = 57/403 (14%)
Query: 52 KRGMIKPNSL---SLTRSLCEFVDSGAMDNALYLFEKMN----QPDTYIWNVIIRGFSNK 104
++G I+P + ++ +LC + + +++AL LF +M+ +P+ +N +IR N
Sbjct: 248 EQGKIEPGVVIYNTIIDALCNYKN---VNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNY 304
Query: 105 GLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVC 164
G + + M I + TF +I A + +E +K++ ++IK +D DI+
Sbjct: 305 GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 364
Query: 165 NSLIDMYFKFGFVEVAEKVFEAMPLRD----LVSWNCMVNGYRVIGDGLKSLMCFKEMLG 220
+SLI+ + ++ A+ +FE M +D +V++N ++ G+ C
Sbjct: 365 SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGF-----------C------ 407
Query: 221 LGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDY 280
K R V G E+ ++ + GL + + T+LI + + + D
Sbjct: 408 ---KAKR---------------VDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDN 449
Query: 281 AERVFNEMTCK----NIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLP 336
A+ VF +M +I+ ++ ++ G NG + + +Q + PD T ++
Sbjct: 450 AQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIE 509
Query: 337 SCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMV- 395
K G + +G + K P++V T ++ + + G + A+ +F + E+ +
Sbjct: 510 GMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLP 569
Query: 396 ---SWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASI 435
++N +I A++++G + EL +R+ DA TI +
Sbjct: 570 DSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLV 612
>AT2G41720.1 | Symbols: EMB2654 | EMB2654 (EMBRYO DEFECTIVE 2654) |
chr2:17403744-17407127 REVERSE
Length = 822
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 107/525 (20%), Positives = 221/525 (42%), Gaps = 67/525 (12%)
Query: 93 IWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKL 152
I+N++IR + + + M+ D T+ +I A GR + + +
Sbjct: 145 IYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDM 204
Query: 153 IKIGLDRDIYVCNSLIDMYFKFG----FVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDG 208
++ + N+LI+ G +EV +K+ + DLV+ N +++ Y+
Sbjct: 205 LRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQY 264
Query: 209 LKSLMCFKEMLGLGEKPDRLSM------ISSLGGCSIGCCVRGG---KEIHCQVIRNGLE 259
K+L F+ M G +PD + +S LG S + K C+
Sbjct: 265 SKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRP------ 318
Query: 260 LDIMVQTSLIDMYAKCGKVDYAERVFNEMTCK----NIVAWNAMIGGYAINGHFLESFTC 315
D++ TS++ +Y+ G+++ VF M + NIV++NA++G YA++G + +
Sbjct: 319 -DVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSV 377
Query: 316 LKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGK 375
L ++++ +IPD ++ LL S + + K + ++ P++V AL+D YG
Sbjct: 378 LGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGS 437
Query: 376 CGQLKFAECVFGRINEK---------------------------------------NMVS 396
G L A +F ++ + N +
Sbjct: 438 NGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAA 497
Query: 397 WNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYIT 456
+N+ I +Y+ E+A+ L+ +R + +K D+VT ++ ++ E +
Sbjct: 498 YNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEME 557
Query: 457 KLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSF----KNLVSWNTMIMAYAIHGFGT 512
L + ++++ Y+K G + A F+ M +++++ +M+ AY
Sbjct: 558 DLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWG 617
Query: 513 ISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMK 557
+ +LF M+ NGIEP+ +L+ + + G + + L + M+
Sbjct: 618 KACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMR 662
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/347 (23%), Positives = 138/347 (39%), Gaps = 58/347 (16%)
Query: 368 ALVDMYGKCGQLKFAECVFGRINEKNMV----SWNAIIAAYVQNGRNEEALELFHCLRNQ 423
AL++ +G+ GQ ++A + + + ++N +I A +G EALE+ + +
Sbjct: 183 ALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDN 242
Query: 424 TLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTA 483
+ PD VT +L AY S+ + ++ +T T N I+Y +K G A
Sbjct: 243 GVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQA 302
Query: 484 RRYFDSMSFK-----------------------------------------NLVSWNTMI 502
F+SM K N+VS+N ++
Sbjct: 303 LDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALM 362
Query: 503 MAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNI 562
AYA+HG ++ + +KQNGI P+ ++ LL+S S + E+F M+ +
Sbjct: 363 GAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERR- 421
Query: 563 DYGIEHYGCMVDLLGRTGNLDAAKQFIEEMP---LVPTARIWGSLLTA-SRN----NNDI 614
+ Y ++D G G L A + +M + P +LL A SR+ N D
Sbjct: 422 KPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDT 481
Query: 615 FFAEFAAKHILSHDNDNTGCYVLLANMYAEAGRWEDVEQIKLVMKKK 661
+ ++ I N NT Y Y A E + M+KK
Sbjct: 482 VLSAAQSRGI----NLNTAAYNSAIGSYINAAELEKAIALYQSMRKK 524
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 78/394 (19%), Positives = 156/394 (39%), Gaps = 74/394 (18%)
Query: 160 DIYVCNSLIDMYFKFGFVEVAEKVFEAMPL----RDLVSWNCMVNGYRVIGDGLKSLMCF 215
DIY N +I ++ + +V+ A +F M D +++ ++N + G ++
Sbjct: 144 DIY--NMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLM 201
Query: 216 KEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKC 275
+ML P R + + + C R E+ ++ NG+ D+
Sbjct: 202 DDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDL------------- 248
Query: 276 GKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLL 335
V N ++ Y + ++ + + M+ + PD T ++
Sbjct: 249 ------------------VTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIII 290
Query: 336 PSCSKFGTLLEGKCIHGYAIRKMF--LPHLVLETALVDMYGKCGQLKFAECVFGRIN--- 390
SK G + + K P +V T+++ +Y G+++ VF +
Sbjct: 291 YCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEG 350
Query: 391 -EKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECK 449
+ N+VS+NA++ AY +G + AL + ++ + PD V+ +L +Y + K
Sbjct: 351 LKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAK 410
Query: 450 QIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHG 509
++ + K N T NA +I AY +G
Sbjct: 411 EVFLMMRKERRKPNVVTYNA-------------------------------LIDAYGSNG 439
Query: 510 FGTISIQLFSRMKQNGIEPNESTFVSLLSSCSIS 543
F ++++F +M+Q+GI+PN + +LL++CS S
Sbjct: 440 FLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRS 473
Score = 70.5 bits (171), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 115/585 (19%), Positives = 232/585 (39%), Gaps = 105/585 (17%)
Query: 52 KRGMIKPNSLSLTRSLCEFVDSGAMDNALYLFEKMN----QPDTYIWNVIIRGFSNKGLF 107
KR +P+ ++ T + + G ++N +FE M +P+ +N ++ ++ G+
Sbjct: 312 KRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMS 371
Query: 108 QEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSL 167
+ ++ GI D ++ ++ + GR + K+V + K ++ N+L
Sbjct: 372 GTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNAL 431
Query: 168 IDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDR 227
ID Y GF+ A ++F M DG+ KP+
Sbjct: 432 IDAYGSNGFLAEAVEIFRQME-----------------QDGI--------------KPNV 460
Query: 228 LSMISSLGGCSIGCCVRGGKEIHCQVI-----RNGLELDIMVQTSLIDMYAKCGKVDYAE 282
+S+ + L CS R K+++ + G+ L+ S I Y +++ A
Sbjct: 461 VSVCTLLAACS-----RSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAI 515
Query: 283 RVFNEMTCKNI----VAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSC 338
++ M K + V + +I G + E+ + LK M++ ++ ++L +
Sbjct: 516 ALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAY 575
Query: 339 SKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWN 398
SK G + E + I Q+K A C E +++++
Sbjct: 576 SKQGQVTEAESIF-------------------------NQMKMAGC------EPDVIAYT 604
Query: 399 AIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKL 458
+++ AY + + +A ELF + ++PD++ ++++ A+ + S + + +
Sbjct: 605 SMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREK 664
Query: 459 ELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKN--LVSWNTMIMAYAIHGFGTIS-- 514
E+ FT +++ C LQ +R D + + L S + + +H FG
Sbjct: 665 EI---PFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKV 721
Query: 515 ---IQLFSRMKQNGIEPNESTFVSLLSSCSISG-----------LVNEGWELFNSMKMDY 560
++LF ++ +G+ N T+ LL G + G + N M D
Sbjct: 722 EAMMKLFYKIIASGVGINLKTYAILLEHLLAVGNWRKYIEVLEWMSGAGIQPSNQMYRDI 781
Query: 561 NIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPLVPTARIWGSLL 605
I +G G + L R L++ + E L+PT R G+LL
Sbjct: 782 -ISFGERSAGIEFEPLIRQ-KLESLRNKGE--GLIPTFRHEGTLL 822
>AT1G52620.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:19603828-19606287 FORWARD
Length = 819
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 121/541 (22%), Positives = 224/541 (41%), Gaps = 61/541 (11%)
Query: 56 IKPNSLSLTRSLCEFVDSGAMDNALYLFEKMNQ-----PDTYIWNVIIRGFSNKGLFQEV 110
+K +L+ L + +SG++ A+ +++ + + PD N ++ +
Sbjct: 130 VKLTHEALSHVLHAYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDA 189
Query: 111 IDFYHRMEYEGIGIDNFTFPFVIKA-CGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLID 169
Y M G +DN++ ++K C + K + G+ K G +I N++I
Sbjct: 190 RKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGK-GCIPNIVFYNTIIG 248
Query: 170 MYFKFGFVEVAEKVFEAMPLR----DLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKP 225
Y K G +E A VF+ + L+ L ++ M+NG+ GD + S E+ G +
Sbjct: 249 GYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRV 308
Query: 226 D----------------RLSMISSLG-----GCSIGC----------CVRGGKEIHC--- 251
++ S+G C C G KE+
Sbjct: 309 SVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFL 368
Query: 252 -QVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMT---CK-NIVAWNAMIGGYAIN 306
+ + GL + + LI Y K + D A ++ +M CK +IV + +I G ++
Sbjct: 369 DEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVS 428
Query: 307 GHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLE 366
GH ++ ++ + + PDA L+ K G L K + + + LP +
Sbjct: 429 GHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVY 488
Query: 367 TALVDMYGKCGQLKFAECVFGRINEK----NMVSWNAIIAAYVQNGRNEEALELFHCLRN 422
L+D + + G A VF EK ++V NA+I + ++G +EAL + +
Sbjct: 489 ATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNE 548
Query: 423 QTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQT 482
+ L PD T ++I+ Y + ++ +I Y+ K + N T +++ + GD +
Sbjct: 549 EHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKM 608
Query: 483 ARRYFDSMSFK----NLVSWNTMIMAYAIHGFGTI--SIQLFSRMKQNGIEPNESTFVSL 536
A F M + N+V++ T+I + A T+ ++ + M N PNE TF L
Sbjct: 609 AEETFKEMQLRDLVPNVVTYTTLIRSLAKES-STLEKAVYYWELMMTNKCVPNEVTFNCL 667
Query: 537 L 537
L
Sbjct: 668 L 668
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 86/393 (21%), Positives = 166/393 (42%), Gaps = 34/393 (8%)
Query: 167 LIDMYFKFGFVEVAEKVFEAMPLR----DLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLG 222
LI Y K ++A K+ M R D+V++ +++G V G ++ +++ G
Sbjct: 386 LIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRG 445
Query: 223 EKPDR--LSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDY 280
PD +M+ S G C G + K + +++ + D V +LID + + G D
Sbjct: 446 VSPDAAIYNMLMS-GLCKTGRFL-PAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDE 503
Query: 281 AERVFNEMTCK----NIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLP 336
A +VF+ K ++V NAMI G+ +G E+ C+ RM E++L+PD T ++
Sbjct: 504 ARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIID 563
Query: 337 SCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEK---- 392
K + I Y + P++V T+L++ + G K AE F + +
Sbjct: 564 GYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVP 623
Query: 393 NMVSWNAIIAAYVQNGRN-EEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQI 451
N+V++ +I + + E+A+ + + P+ VT +L + K+
Sbjct: 624 NVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFV--------KKT 675
Query: 452 HAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFG 511
+ SN S+ + R D S + ++N+ ++ +HG
Sbjct: 676 SGKVLAEPDGSNHGQSSLFSEFF--------HRMKSDGWS-DHAAAYNSALVCLCVHGMV 726
Query: 512 TISIQLFSRMKQNGIEPNESTFVSLLSSCSISG 544
+ +M + G P+ +F ++L + G
Sbjct: 727 KTACMFQDKMVKKGFSPDPVSFAAILHGFCVVG 759
Score = 76.6 bits (187), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 101/464 (21%), Positives = 183/464 (39%), Gaps = 83/464 (17%)
Query: 12 NSYKPDDASFKQMGAPKRDLLVNPRIRKSNPTKKQMS-----ETPKRGMIKPNSLSLTRS 66
N KPD A++ ++L+N R KK+++ E K+G+I PN+LS
Sbjct: 339 NDCKPDVATY--------NILIN---RLCKEGKKEVAVGFLDEASKKGLI-PNNLSYAPL 386
Query: 67 LCEFVDSGAMDNA----LYLFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGI 122
+ + S D A L + E+ +PD + ++I G G + ++ ++ G+
Sbjct: 387 IQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGV 446
Query: 123 GIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEK 182
D + ++ + F+ K + +++ + D YV +LID + + G + A K
Sbjct: 447 SPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARK 506
Query: 183 VF----EAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCS 238
VF E D+V N M+ G+ G ++L C M PD+ +
Sbjct: 507 VFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTY-------- 558
Query: 239 IGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMT---CK-NIV 294
+++ID Y K + A ++F M CK N+V
Sbjct: 559 ---------------------------STIIDGYVKQQDMATAIKIFRYMEKNKCKPNVV 591
Query: 295 AWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLE-------- 346
+ ++I G+ G F + K MQ +L+P+ +T L+ S +K + LE
Sbjct: 592 TYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWEL 651
Query: 347 ---GKCIHGYAIRKMFLPHLVLETA---LVDMYGKC-GQLKFAECVFGRIN----EKNMV 395
KC+ L V +T+ L + G GQ F R+ +
Sbjct: 652 MMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAA 711
Query: 396 SWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAY 439
++N+ + +G + A + + PD V+ A+IL +
Sbjct: 712 AYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGF 755
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 115/607 (18%), Positives = 235/607 (38%), Gaps = 74/607 (12%)
Query: 106 LFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKI-GLDRDIYVC 164
+F E+ D + E + + + V+ A S + +++ ++++ D+ C
Sbjct: 114 IFNEIEDVLGNLRNENVKLTHEALSHVLHAYAESGSLSKAVEIYDYVVELYDSVPDVIAC 173
Query: 165 NSLIDMYFKFGFVEVAEKVFEAMPLR---------------------------------- 190
NSL+ + K + A KV++ M R
Sbjct: 174 NSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWG 233
Query: 191 -----DLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRG 245
++V +N ++ GY +GD + + FKE+ G P + + G G C G
Sbjct: 234 KGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMP----TLETFGTMINGFCKEG 289
Query: 246 ----GKEIHCQVIRNGLELDIMVQTSLIDMYAKCG-KVDYAERV--FNEMTCK-NIVAWN 297
+ +V GL + + ++ID + G KVD AE + CK ++ +N
Sbjct: 290 DFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYN 349
Query: 298 AMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPS-CSKFGTLLEGKCIHGYAIR 356
+I G + L + LIP+ ++ L+ + C + K + A R
Sbjct: 350 ILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAER 409
Query: 357 KMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVS----WNAIIAAYVQNGRNEE 412
P +V L+ G + A + ++ ++ + +N +++ + GR
Sbjct: 410 GC-KPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLP 468
Query: 413 ALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVY 472
A LF + ++ + PDA A+++ + E +++ + + + + NA++
Sbjct: 469 AKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIK 528
Query: 473 MYAKCGDLQTARRYFDSMSFKNLV----SWNTMIMAYAIHGFGTISIQLFSRMKQNGIEP 528
+ + G L A + M+ ++LV +++T+I Y +I++F M++N +P
Sbjct: 529 GFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKP 588
Query: 529 NESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQF 588
N T+ SL++ G E F M++ + + + + L + L+ A +
Sbjct: 589 NVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYY 648
Query: 589 IEEM---PLVPTARIWGSLLTASRNNNDIFFAEFAAKHILSHDNDNTGCYVLLANMY--A 643
E M VP + LL F + + K + D N G L + +
Sbjct: 649 WELMMTNKCVPNEVTFNCLLQG-------FVKKTSGKVLAEPDGSNHGQSSLFSEFFHRM 701
Query: 644 EAGRWED 650
++ W D
Sbjct: 702 KSDGWSD 708
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 83/434 (19%), Positives = 167/434 (38%), Gaps = 46/434 (10%)
Query: 269 IDMYAKC---------GKVDYAERVFNEMTCK----NIVAWNAMIGGYAINGHFLESFTC 315
+D Y+ C GKV+ ++ K NIV +N +IGGY G ++
Sbjct: 203 VDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLV 262
Query: 316 LKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETAL------ 369
K ++ + +P+ FGT++ G C G + L V E L
Sbjct: 263 FKELK----------LKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWF 312
Query: 370 ----VDMYGKCG-QLKFAECVFGRIN---EKNMVSWNAIIAAYVQNGRNEEALELFHCLR 421
+D + G ++ AE + I + ++ ++N +I + G+ E A+
Sbjct: 313 LNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEAS 372
Query: 422 NQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQ 481
+ L P+ ++ A ++ AY + ++ + + + T +++ G +
Sbjct: 373 KKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMD 432
Query: 482 TA----RRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLL 537
A + D + +N ++ G + LFS M I P+ + +L+
Sbjct: 433 DAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLI 492
Query: 538 SSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEM---PL 594
SG +E ++F S+ ++ + + H+ M+ R+G LD A + M L
Sbjct: 493 DGFIRSGDFDEARKVF-SLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHL 551
Query: 595 VPTARIWGSLLTASRNNNDIFFAEFAAKHILSHD-NDNTGCYVLLANMYAEAGRWEDVEQ 653
VP + +++ D+ A +++ + N Y L N + G ++ E+
Sbjct: 552 VPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEE 611
Query: 654 IKLVMKKKGLAKTV 667
M+ + L V
Sbjct: 612 TFKEMQLRDLVPNV 625
>AT3G06920.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:2181717-2184449 FORWARD
Length = 871
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 134/637 (21%), Positives = 255/637 (40%), Gaps = 46/637 (7%)
Query: 70 FVDSGAMDNALYLFEKMNQ----PDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGID 125
F G +D+AL L ++M D ++NV I F G F+H +E G+ D
Sbjct: 213 FAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPD 272
Query: 126 NFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFE 185
T+ +I + E ++ L K Y N++I Y G + A + E
Sbjct: 273 EVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLE 332
Query: 186 AM----PLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGC 241
+ ++++NC++ R +G ++L F+EM K D +S+ I
Sbjct: 333 RQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM-----KKDAAPNLSTYN-ILIDM 386
Query: 242 CVRGGK-----EIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCK----N 292
R GK E+ + + GL ++ ++D K K+D A +F EM K +
Sbjct: 387 LCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPD 446
Query: 293 IVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHG 352
+ + ++I G G +++ ++M + + ++I +L+ + G +G I+
Sbjct: 447 EITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYK 506
Query: 353 YAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMV----SWNAIIAAYVQNG 408
I + P L L +D K G+ + +F I + V S++ +I ++ G
Sbjct: 507 DMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAG 566
Query: 409 RNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSN 468
E ELF+ ++ Q D ++ + + V++ Q+ + T
Sbjct: 567 FANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYG 626
Query: 469 AIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHGFGTI-----SIQLFSRMKQ 523
+++ AK L A F+ K + N +I + I GFG + + + + Q
Sbjct: 627 SVIDGLAKIDRLDEAYMLFEEAKSKR-IELNVVIYSSLIDGFGKVGRIDEAYLILEELMQ 685
Query: 524 NGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLD 583
G+ PN T+ SLL + + +NE F SMK + YG +++ L + +
Sbjct: 686 KGLTPNLYTWNSLLDALVKAEEINEALVCFQSMK-ELKCTPNQVTYGILINGLCKVRKFN 744
Query: 584 AAKQFIEEMP---LVPTARIWGSLLTASRNNNDI-----FFAEFAAKHILSHDNDNTGCY 635
A F +EM + P+ + ++++ +I F F A + ++ CY
Sbjct: 745 KAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVP----DSACY 800
Query: 636 VLLANMYAEAGRWEDVEQIKLVMKKKGLAKTVDCCTV 672
+ + R D + +++GL C V
Sbjct: 801 NAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVV 837
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 120/573 (20%), Positives = 222/573 (38%), Gaps = 58/573 (10%)
Query: 57 KPNSLSLTRSLCEFVDSGAMDNALYLFEKMNQ----PDTYIWNVIIRGFSNKGLFQEVID 112
+P + T + F D L LF++M + P +++ +IRGF+ +G +
Sbjct: 165 RPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALS 224
Query: 113 FYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYF 172
M+ + D + I + G++ K ++ GL D S+I +
Sbjct: 225 LLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLC 284
Query: 173 KFGFVEVAEKVFEAMPLRDLV----SWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRL 228
K ++ A ++FE + V ++N M+ GY G F E L E+
Sbjct: 285 KANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGK-------FDEAYSLLERQRAK 337
Query: 229 SMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEM 288
I S ++ ++ K GKVD A +VF EM
Sbjct: 338 GSIPS----------------------------VIAYNCILTCLRKMGKVDEALKVFEEM 369
Query: 289 ---TCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLL 345
N+ +N +I G +F MQ+ L P+ T+ ++ K L
Sbjct: 370 KKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLD 429
Query: 346 EGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEK----NMVSWNAII 401
E + K+ P + +L+D GK G++ A V+ ++ + N + + ++I
Sbjct: 430 EACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLI 489
Query: 402 AAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELS 461
+ +GR E+ +++ + NQ PD + + + + + + + I
Sbjct: 490 KNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFV 549
Query: 462 SNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLV----SWNTMIMAYAIHGFGTISIQL 517
+ + + +++ K G F SM + V ++N +I + G + QL
Sbjct: 550 PDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQL 609
Query: 518 FSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLG 577
MK G EP T+ S++ + ++E + LF K I+ + Y ++D G
Sbjct: 610 LEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAK-SKRIELNVVIYSSLIDGFG 668
Query: 578 RTGNLDAAKQFIEEM---PLVPTARIWGSLLTA 607
+ G +D A +EE+ L P W SLL A
Sbjct: 669 KVGRIDEAYLILEELMQKGLTPNLYTWNSLLDA 701
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 104/529 (19%), Positives = 208/529 (39%), Gaps = 61/529 (11%)
Query: 194 SWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQV 253
++ ++ + + L F++M LG +P + + G + V + ++
Sbjct: 170 AYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEM 229
Query: 254 IRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNI-------------------- 293
+ L+ DI++ ID + K GKVD A + F+E+ +
Sbjct: 230 KSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRL 289
Query: 294 -------------------VAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINL 334
A+N MI GY G F E+++ L+R + IP I +
Sbjct: 290 DEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCI 349
Query: 335 LPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINE--- 391
L K G + E + ++K P+L L+DM + G+L A + + +
Sbjct: 350 LTCLRKMGKVDEALKVFE-EMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGL 408
Query: 392 -KNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQ 450
N+ + N ++ ++ + +EA +F + + PD +T S++ ++ V + +
Sbjct: 409 FPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYK 468
Query: 451 IHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKN----LVSWNTMIMAYA 506
++ + + +N+ +++ + G + + + M +N L NT +
Sbjct: 469 VYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMF 528
Query: 507 IHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGI 566
G +F +K P+ ++ L+ +G NE +ELF SMK +
Sbjct: 529 KAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMK-EQGCVLDT 587
Query: 567 EHYGCMVDLLGRTGNLDAAKQFIEEMP---LVPTARIWGSLLTA-----SRNNNDIFFAE 618
Y ++D + G ++ A Q +EEM PT +GS++ + + F E
Sbjct: 588 RAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEE 647
Query: 619 FAAKHILSHDNDNTGCYVLLANMYAEAGRWEDVEQIKLVMKKKGLAKTV 667
+K I N Y L + + + GR ++ I + +KGL +
Sbjct: 648 AKSKRI----ELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNL 692
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 99/488 (20%), Positives = 188/488 (38%), Gaps = 57/488 (11%)
Query: 73 SGAMDNALYLFEKMNQ----PDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFT 128
+G +D A L + M + P+ N+++ E + M+Y+ D T
Sbjct: 390 AGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEIT 449
Query: 129 FPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMP 188
F +I G++ + KV+ K++ + V SLI +F G E K++
Sbjct: 450 FCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIY---- 505
Query: 189 LRDLVSWNC-----MVNGYR----VIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSI 239
+D+++ NC ++N Y G+ K F+E+ PD S + G
Sbjct: 506 -KDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIK 564
Query: 240 GCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAM 299
E+ + G LD +ID + KCGKV+ A
Sbjct: 565 AGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKA------------------ 606
Query: 300 IGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMF 359
+ L+ M+ P +T +++ +K L E + A K
Sbjct: 607 -------------YQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRI 653
Query: 360 LPHLVLETALVDMYGKCGQLKFAECVFGRINEK----NMVSWNAIIAAYVQNGRNEEALE 415
++V+ ++L+D +GK G++ A + + +K N+ +WN+++ A V+ EAL
Sbjct: 654 ELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALV 713
Query: 416 LFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYA 475
F ++ P+ VT ++ ++ ++ + K + +T + ++ A
Sbjct: 714 CFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLA 773
Query: 476 KCGDLQTARRYFDSMSFKNLVS----WNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNES 531
K G++ A FD V +N MI + + LF ++ G+ +
Sbjct: 774 KAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNK 833
Query: 532 TFVSLLSS 539
T V LL +
Sbjct: 834 TCVVLLDT 841
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 110/562 (19%), Positives = 220/562 (39%), Gaps = 66/562 (11%)
Query: 56 IKPNSLSLTRSLCEFVDSGAMDNALYLFEKMNQ----PDTYIWNVIIRGFSNKGLFQEVI 111
+KP+ ++ T + + +D A+ +FE + + P TY +N +I G+ + G F E
Sbjct: 269 LKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAY 328
Query: 112 DFYHRMEYEGIGIDNFTFPFVIK-----ACGR--------LLSFIEGKK----------- 147
R +G + P VI C R L F E KK
Sbjct: 329 SLLERQRAKG------SIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNI 382
Query: 148 ----------------VHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLR- 190
+ + K GL ++ N ++D K ++ A +FE M +
Sbjct: 383 LIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKV 442
Query: 191 ---DLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGK 247
D +++ +++G +G + +++ML + + + S + G
Sbjct: 443 CTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGH 502
Query: 248 EIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIV----AWNAMIGGY 303
+I+ +I D+ + + +D K G+ + +F E+ + V +++ +I G
Sbjct: 503 KIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGL 562
Query: 304 AINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHL 363
G E++ M+E + D ++ K G + + + K F P +
Sbjct: 563 IKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTV 622
Query: 364 VLETALVDMYGKCGQLKFAECVFGRINEK----NMVSWNAIIAAYVQNGRNEEALELFHC 419
V +++D K +L A +F K N+V ++++I + + GR +EA +
Sbjct: 623 VTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEE 682
Query: 420 LRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGD 479
L + L P+ T S+L A + ++E + +L+ + N T ++ K
Sbjct: 683 LMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRK 742
Query: 480 LQTARRYFDSMSFKNL----VSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVS 535
A ++ M + + +S+ TMI A G + LF R K NG P+ + + +
Sbjct: 743 FNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNA 802
Query: 536 LLSSCSISGLVNEGWELFNSMK 557
++ S + + LF +
Sbjct: 803 MIEGLSNGNRAMDAFSLFEETR 824
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 86/412 (20%), Positives = 169/412 (41%), Gaps = 34/412 (8%)
Query: 267 SLIDMYAKCGKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLK--RMQEDNL 324
SL+ + A+C D +++ EM+ G ++N C+K +++E
Sbjct: 103 SLLLVMARCRNFDALDQILGEMSVAGF--------GPSVNTCIEMVLGCVKANKLREGYD 154
Query: 325 IPDAITMINLLPSCSKFGTLLEG--KCIHGYAIRKMFL--------PHLVLETALVDMYG 374
+ + P+ S + TL+ H + +F P + L T L+ +
Sbjct: 155 VVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFA 214
Query: 375 KCGQLKFAECVFGRIN----EKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAV 430
K G++ A + + + ++V +N I ++ + G+ + A + FH + LKPD V
Sbjct: 215 KEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEV 274
Query: 431 TIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSM 490
T S++ + + E ++ ++ K T+ N ++ Y G A +
Sbjct: 275 TYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQ 334
Query: 491 ----SFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLV 546
S +++++N ++ G ++++F MK++ PN ST+ L+ +G +
Sbjct: 335 RAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAA-PNLSTYNILIDMLCRAGKL 393
Query: 547 NEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMPL---VPTARIWGS 603
+ +EL +SM+ + + MVD L ++ LD A EEM P + S
Sbjct: 394 DTAFELRDSMQ-KAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCS 452
Query: 604 LLTASRNNNDIFFAEFAAKHILSHD-NDNTGCYVLLANMYAEAGRWEDVEQI 654
L+ + A + +L D N+ Y L + GR ED +I
Sbjct: 453 LIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKI 504
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/286 (19%), Positives = 116/286 (40%), Gaps = 10/286 (3%)
Query: 405 VQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNT 464
V+ + E ++ +R +P +++ A++ + + + +L
Sbjct: 144 VKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTV 203
Query: 465 FTSNAIVYMYAKCGDLQTARRYFDSMSFKNL----VSWNTMIMAYAIHGFGTISIQLFSR 520
++ +AK G + +A D M +L V +N I ++ G ++ + F
Sbjct: 204 HLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHE 263
Query: 521 MKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTG 580
++ NG++P+E T+ S++ + ++E E+F ++ + + Y M+ G G
Sbjct: 264 IEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYA-YNTMIMGYGSAG 322
Query: 581 NLDAAKQFIEEMPL---VPTARIWGSLLTASRNNNDIFFAEFAAKHILSHDNDNTGCYVL 637
D A +E +P+ + +LT R + A + + N Y +
Sbjct: 323 KFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNI 382
Query: 638 LANMYAEAGRWEDVEQIKLVMKKKGLAKTVDCCT--VESKGKSQKF 681
L +M AG+ + +++ M+K GL V V+ KSQK
Sbjct: 383 LIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKL 428
>AT1G06710.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:2057279-2060119 REVERSE
Length = 946
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 122/574 (21%), Positives = 234/574 (40%), Gaps = 59/574 (10%)
Query: 66 SLCEFVDSGAMDNALYLFEKMN-QPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGI 124
SLC+ G AL L E N PDT + +I G LF+E +DF +RM
Sbjct: 238 SLCKV---GKWREALTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLP 294
Query: 125 DNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVF 184
+ T+ ++ C K+V ++ G + NSL+ Y G A K+
Sbjct: 295 NVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLL 354
Query: 185 EAM----PLRDLVSWNCMVNGYRVIGDGLKSLMC---------FKEMLGLGEKPDRLSMI 231
+ M + V +N ++ + GD SL C + EML G ++++ +
Sbjct: 355 KKMVKCGHMPGYVVYNILIGS--ICGDK-DSLNCDLLDLAEKAYSEMLAAGVVLNKIN-V 410
Query: 232 SSLGGCSIGCCVRGGKEIHCQVIR----NGLELDIMVQTSLIDMYAKCGKVDYAERVFNE 287
SS C C G E VIR G D + +++ K++ A +F E
Sbjct: 411 SSFTRC---LCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEE 467
Query: 288 MTCKNIVA----WNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGT 343
M +VA + M+ + G ++ M+E P+ +T L+ + K
Sbjct: 468 MKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKK 527
Query: 344 LLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRI-------------- 389
+ + + + LP++V +AL+D + K GQ++ A +F R+
Sbjct: 528 VSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFK 587
Query: 390 ------NEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELA 443
N+V++ A++ + ++ R EEA +L + + +P+ + +++ ++
Sbjct: 588 QYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVG 647
Query: 444 TVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIM 503
+ E +++ +++ + +T ++++ Y K A + M +N + N +I
Sbjct: 648 KLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKM-LENSCAPNVVIY 706
Query: 504 AYAIHGFGTI-----SIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKM 558
I G + + +L M++ G +PN T+ +++ + G + EL M
Sbjct: 707 TEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMG- 765
Query: 559 DYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEM 592
+ Y ++D + G LD A +EEM
Sbjct: 766 SKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEM 799
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 108/518 (20%), Positives = 220/518 (42%), Gaps = 41/518 (7%)
Query: 58 PNSLSLTRSLCEFVDSGAMDNALYLFEKMNQ----PDTYIWNVIIRGFSNKGLFQEVIDF 113
P++ + ++ L ++ M+ A LFE+M + D Y + +++ F GL ++ +
Sbjct: 440 PDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKW 499
Query: 114 YHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFK 173
++ M G + T+ +I A + ++ ++ G +I ++LID + K
Sbjct: 500 FNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCK 559
Query: 174 FGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISS 233
G VE A ++FE M C G + + D M FK+ E+P+ ++ +
Sbjct: 560 AGQVEKACQIFERM---------C---GSKDVPD---VDMYFKQYDDNSERPNVVTYGAL 604
Query: 234 LGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMT---- 289
L G V +++ + G E + +V +LID K GK+D A+ V EM+
Sbjct: 605 LDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGF 664
Query: 290 CKNIVAWNAMIGGY-AINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGK 348
+ ++++I Y + L S L +M E++ P+ + ++ K G E
Sbjct: 665 PATLYTYSSLIDRYFKVKRQDLAS-KVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAY 723
Query: 349 CIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEK----NMVSWNAIIAAY 404
+ K P++V TA++D +G G+++ + R+ K N V++ +I
Sbjct: 724 KLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHC 783
Query: 405 VQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAE--LATVSECKQIHAYITKLELSS 462
+NG + A L ++ ++ + + + ++ +I T LS
Sbjct: 784 CKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSV 843
Query: 463 NTFTSNAIVYMYAKCGDLQTARRYFDSMSF--KNLV----SWNTMIMAYAIHGFGTISIQ 516
+ ++ K L+ A R + ++ LV ++N++I + + + Q
Sbjct: 844 YRLLIDNLI----KAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQ 899
Query: 517 LFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFN 554
LFS M + G+ P +F SL+ + ++E L +
Sbjct: 900 LFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLD 937
>AT5G01110.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:42114-44303 REVERSE
Length = 729
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 101/468 (21%), Positives = 202/468 (43%), Gaps = 24/468 (5%)
Query: 84 EKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFI 143
EK PD +N +I +S+KGL +E + + M +G +T+ VI + +
Sbjct: 263 EKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYE 322
Query: 144 EGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLR----DLVSWNCMV 199
K+V ++++ GL D SL+ K G V EKVF M R DLV ++ M+
Sbjct: 323 RAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMM 382
Query: 200 NGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLE 259
+ + G+ K+LM F + G PD + + G + + ++++ G
Sbjct: 383 SLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCA 442
Query: 260 LDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIV----AWNAMIGGYAINGHFLESFTC 315
+D++ +++ K + A+++FNEMT + + +I G+ G+ +
Sbjct: 443 MDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMEL 502
Query: 316 LKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGK 375
++M+E + D +T LL K G + K I + K LP + + LV+
Sbjct: 503 FQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCS 562
Query: 376 CGQLKFAECVFGRINEKNM----VSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVT 431
G L A V+ + KN+ + N++I Y ++G + + ++ PD ++
Sbjct: 563 KGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCIS 622
Query: 432 IASILPAYAELATVSECKQIHAYITKLE-----LSSNTFTSNAIVYMYAKCGDLQTA--- 483
+++ + +S+ + K+E L + FT N+I++ + + ++ A
Sbjct: 623 YNTLIYGFVREENMSKA---FGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVV 679
Query: 484 -RRYFDSMSFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNE 530
R+ + + ++ MI + T + ++ M Q G P++
Sbjct: 680 LRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPDD 727
Score = 96.3 bits (238), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 104/490 (21%), Positives = 203/490 (41%), Gaps = 52/490 (10%)
Query: 119 YEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVE 178
+ G ++ F +I+ + E + L G I CN+LI + G+VE
Sbjct: 158 FSNCGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVE 217
Query: 179 VAEKVFEAMPLR----DLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSL 234
+A V++ + ++ + N MVN + DG K +++ S
Sbjct: 218 LAWGVYQEISRSGVGINVYTLNIMVNA--LCKDG---------------KMEKVGTFLS- 259
Query: 235 GGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCK--- 291
QV G+ DI+ +LI Y+ G ++ A + N M K
Sbjct: 260 -----------------QVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFS 302
Query: 292 -NIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCI 350
+ +N +I G +G + + M L PD+ T +LL K G ++E + +
Sbjct: 303 PGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKV 362
Query: 351 HGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWNAI----IAAYVQ 406
+ +P LV ++++ ++ + G L A F + E ++ N I I Y +
Sbjct: 363 FSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCR 422
Query: 407 NGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFT 466
G A+ L + + Q D VT +IL + + E ++ +T+ L +++T
Sbjct: 423 KGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYT 482
Query: 467 SNAIVYMYAKCGDLQTARRYFDSMSFK----NLVSWNTMIMAYAIHGFGTISIQLFSRMK 522
++ + K G+LQ A F M K ++V++NT++ + G + ++++ M
Sbjct: 483 LTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMV 542
Query: 523 QNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNL 582
I P ++ L+++ G + E + +++ M + NI + M+ R+GN
Sbjct: 543 SKEILPTPISYSILVNALCSKGHLAEAFRVWDEM-ISKNIKPTVMICNSMIKGYCRSGNA 601
Query: 583 DAAKQFIEEM 592
+ F+E+M
Sbjct: 602 SDGESFLEKM 611
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/381 (20%), Positives = 161/381 (42%), Gaps = 18/381 (4%)
Query: 243 VRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCK----NIVAWNA 298
+R E + G + I +LI + G V+ A V+ E++ N+ N
Sbjct: 181 LREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNI 240
Query: 299 MIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKM 358
M+ +G + T L ++QE + PD +T L+ + S G + E + K
Sbjct: 241 MVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKG 300
Query: 359 FLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNM----VSWNAIIAAYVQNGRNEEAL 414
F P + +++ K G+ + A+ VF + + ++ +++ + G E
Sbjct: 301 FSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETE 360
Query: 415 ELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMY 474
++F +R++ + PD V +S++ + + + + + L + ++ Y
Sbjct: 361 KVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGY 420
Query: 475 AKCGDLQTARRYFDSMSFK----NLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNE 530
+ G + A + M + ++V++NT++ + +LF+ M + + P+
Sbjct: 421 CRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDS 480
Query: 531 STFVSLLSS-CSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFI 589
T L+ C + L N ELF MK + I + Y ++D G+ G++D AK+
Sbjct: 481 YTLTILIDGHCKLGNLQN-AMELFQKMK-EKRIRLDVVTYNTLLDGFGKVGDIDTAKEIW 538
Query: 590 EEM---PLVPTARIWGSLLTA 607
+M ++PT + L+ A
Sbjct: 539 ADMVSKEILPTPISYSILVNA 559
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 107/254 (42%), Gaps = 11/254 (4%)
Query: 45 KQMSETPKRGMIKPNSLSLTRSLCEFVDSGAMDNALYLFEKMNQP----DTYIWNVIIRG 100
K +E +R + P+S +LT + G + NA+ LF+KM + D +N ++ G
Sbjct: 466 KLFNEMTERALF-PDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDG 524
Query: 101 FSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRD 160
F G + + M + I ++ ++ A E +V ++I +
Sbjct: 525 FGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPT 584
Query: 161 IYVCNSLIDMYFKFGFVEVAEKVFEAMP----LRDLVSWNCMVNGYRVIGDGLKSLMCFK 216
+ +CNS+I Y + G E E M + D +S+N ++ G+ + K+ K
Sbjct: 585 VMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVK 644
Query: 217 EMLGL--GEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAK 274
+M G PD + S L G ++ + + ++I G+ D T +I+ +
Sbjct: 645 KMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVS 704
Query: 275 CGKVDYAERVFNEM 288
+ A R+ +EM
Sbjct: 705 QDNLTEAFRIHDEM 718
>AT2G41720.2 | Symbols: EMB2654 | EMB2654 (EMBRYO DEFECTIVE 2654) |
chr2:17403861-17406648 REVERSE
Length = 683
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 105/523 (20%), Positives = 220/523 (42%), Gaps = 63/523 (12%)
Query: 93 IWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKL 152
I+N++IR + + + M+ D T+ +I A GR + + +
Sbjct: 13 IYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDM 72
Query: 153 IKIGLDRDIYVCNSLIDMYFKFG----FVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDG 208
++ + N+LI+ G +EV +K+ + DLV+ N +++ Y+
Sbjct: 73 LRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQY 132
Query: 209 LKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGL-------ELD 261
K+L F+ M G +PD + I C + G+ + N + D
Sbjct: 133 SKALSYFELMKGAKVRPDTTTF-----NIIIYCLSKLGQSSQALDLFNSMREKRAECRPD 187
Query: 262 IMVQTSLIDMYAKCGKVDYAERVFNEMTCK----NIVAWNAMIGGYAINGHFLESFTCLK 317
++ TS++ +Y+ G+++ VF M + NIV++NA++G YA++G + + L
Sbjct: 188 VVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLG 247
Query: 318 RMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCG 377
++++ +IPD ++ LL S + + K + ++ P++V AL+D YG G
Sbjct: 248 DIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNG 307
Query: 378 QLKFAECVFGRINEK---------------------------------------NMVSWN 398
L A +F ++ + N ++N
Sbjct: 308 FLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYN 367
Query: 399 AIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKL 458
+ I +Y+ E+A+ L+ +R + +K D+VT ++ ++ E + L
Sbjct: 368 SAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDL 427
Query: 459 ELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSF----KNLVSWNTMIMAYAIHGFGTIS 514
+ ++++ Y+K G + A F+ M +++++ +M+ AY +
Sbjct: 428 SIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKA 487
Query: 515 IQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMK 557
+LF M+ NGIEP+ +L+ + + G + + L + M+
Sbjct: 488 CELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMR 530
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/347 (23%), Positives = 138/347 (39%), Gaps = 58/347 (16%)
Query: 368 ALVDMYGKCGQLKFAECVFGRINEKNMV----SWNAIIAAYVQNGRNEEALELFHCLRNQ 423
AL++ +G+ GQ ++A + + + ++N +I A +G EALE+ + +
Sbjct: 51 ALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDN 110
Query: 424 TLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTA 483
+ PD VT +L AY S+ + ++ +T T N I+Y +K G A
Sbjct: 111 GVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQA 170
Query: 484 RRYFDSMSFK-----------------------------------------NLVSWNTMI 502
F+SM K N+VS+N ++
Sbjct: 171 LDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALM 230
Query: 503 MAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNI 562
AYA+HG ++ + +KQNGI P+ ++ LL+S S + E+F M+ +
Sbjct: 231 GAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERR- 289
Query: 563 DYGIEHYGCMVDLLGRTGNLDAAKQFIEEMP---LVPTARIWGSLLTA-SRN----NNDI 614
+ Y ++D G G L A + +M + P +LL A SR+ N D
Sbjct: 290 KPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDT 349
Query: 615 FFAEFAAKHILSHDNDNTGCYVLLANMYAEAGRWEDVEQIKLVMKKK 661
+ ++ I N NT Y Y A E + M+KK
Sbjct: 350 VLSAAQSRGI----NLNTAAYNSAIGSYINAAELEKAIALYQSMRKK 392
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 78/394 (19%), Positives = 156/394 (39%), Gaps = 74/394 (18%)
Query: 160 DIYVCNSLIDMYFKFGFVEVAEKVFEAMPL----RDLVSWNCMVNGYRVIGDGLKSLMCF 215
DIY N +I ++ + +V+ A +F M D +++ ++N + G ++
Sbjct: 12 DIY--NMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLM 69
Query: 216 KEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKC 275
+ML P R + + + C R E+ ++ NG+ D+
Sbjct: 70 DDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDL------------- 116
Query: 276 GKVDYAERVFNEMTCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLL 335
V N ++ Y + ++ + + M+ + PD T ++
Sbjct: 117 ------------------VTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIII 158
Query: 336 PSCSKFGTLLEGKCIHGYAIRKMF--LPHLVLETALVDMYGKCGQLKFAECVFGRINEK- 392
SK G + + K P +V T+++ +Y G+++ VF + +
Sbjct: 159 YCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEG 218
Query: 393 ---NMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECK 449
N+VS+NA++ AY +G + AL + ++ + PD V+ +L +Y + K
Sbjct: 219 LKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAK 278
Query: 450 QIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVSWNTMIMAYAIHG 509
++ + K N T NA +I AY +G
Sbjct: 279 EVFLMMRKERRKPNVVTYNA-------------------------------LIDAYGSNG 307
Query: 510 FGTISIQLFSRMKQNGIEPNESTFVSLLSSCSIS 543
F ++++F +M+Q+GI+PN + +LL++CS S
Sbjct: 308 FLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRS 341
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 96/506 (18%), Positives = 204/506 (40%), Gaps = 90/506 (17%)
Query: 52 KRGMIKPNSLSLTRSLCEFVDSGAMDNALYLFEKMN----QPDTYIWNVIIRGFSNKGLF 107
KR +P+ ++ T + + G ++N +FE M +P+ +N ++ ++ G+
Sbjct: 180 KRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMS 239
Query: 108 QEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSL 167
+ ++ GI D ++ ++ + GR + K+V + K ++ N+L
Sbjct: 240 GTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNAL 299
Query: 168 IDMYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDR 227
ID Y GF+ A ++F M DG+ KP+
Sbjct: 300 IDAYGSNGFLAEAVEIFRQME-----------------QDGI--------------KPNV 328
Query: 228 LSMISSLGGCSIGCCVRGGKEIHCQVI-----RNGLELDIMVQTSLIDMYAKCGKVDYAE 282
+S+ + L CS R K+++ + G+ L+ S I Y +++ A
Sbjct: 329 VSVCTLLAACS-----RSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAI 383
Query: 283 RVFNEMTCKNI----VAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSC 338
++ M K + V + +I G + E+ + LK M++ ++ ++L +
Sbjct: 384 ALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAY 443
Query: 339 SKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEKNMVSWN 398
SK G + E + I Q+K A C E +++++
Sbjct: 444 SKQGQVTEAESIF-------------------------NQMKMAGC------EPDVIAYT 472
Query: 399 AIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKL 458
+++ AY + + +A ELF + ++PD++ ++++ A+ + S + + +
Sbjct: 473 SMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREK 532
Query: 459 ELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKN--LVSWNTMIMAYAIHGFGTIS-- 514
E+ FT +++ C LQ +R D + + L S + + +H FG
Sbjct: 533 EI---PFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKV 589
Query: 515 ---IQLFSRMKQNGIEPNESTFVSLL 537
++LF ++ +G+ N T+ LL
Sbjct: 590 EAMMKLFYKIIASGVGINLKTYAILL 615
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD
Length = 952
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 123/571 (21%), Positives = 232/571 (40%), Gaps = 87/571 (15%)
Query: 74 GAMDNALYLFEKMN----QPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTF 129
G M A FE+M P + I+ +I ++ E + +M+ EGI + T+
Sbjct: 323 GDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTY 382
Query: 130 PFVIKACGRL-------LSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFV-EVAE 181
++ + F E K++H L + IY +M V E+ E
Sbjct: 383 SVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEE 442
Query: 182 KVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGC 241
+ +A + ++ M++GY ++ D K L+ FK + G P ++ GC
Sbjct: 443 EGIDA----PIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVT---------YGC 489
Query: 242 CVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYA---ERVFNEMTCK-NIVAWN 297
LI++Y K GK+ A RV E K N+ ++
Sbjct: 490 --------------------------LINLYTKVGKISKALEVSRVMKEEGVKHNLKTYS 523
Query: 298 AMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFG-------TLLEGKCI 350
MI G+ + +F + M ++ + PD I N++ + G T+ E + +
Sbjct: 524 MMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKL 583
Query: 351 HGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINE----KNMVSWNAIIAAYVQ 406
+ F+P ++ Y K G ++ + VF + + ++N +I V+
Sbjct: 584 RHRPTTRTFMP-------IIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVE 636
Query: 407 NGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLE---LSSN 463
+ E+A+E+ + + + T I+ YA +V + + Y T+L+ L +
Sbjct: 637 KRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYA---SVGDTGKAFEYFTRLQNEGLDVD 693
Query: 464 TFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVS----WNTMIMAYAIHGFGTISIQLFS 519
FT A++ K G +Q+A MS +N+ +N +I +A G + L
Sbjct: 694 IFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQ 753
Query: 520 RMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRT 579
+MK+ G++P+ T+ S +S+CS +G +N + M+ + I+ Y ++ R
Sbjct: 754 QMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEA-LGVKPNIKTYTTLIKGWARA 812
Query: 580 GNLDAAKQFIEEMPLV---PTARIWGSLLTA 607
+ A EEM + P ++ LLT+
Sbjct: 813 SLPEKALSCYEEMKAMGIKPDKAVYHCLLTS 843
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 94/440 (21%), Positives = 180/440 (40%), Gaps = 49/440 (11%)
Query: 183 VFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIG-- 240
FE + + MV Y GD ++ F+ M G P S + ++G
Sbjct: 300 AFEKISKPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRD 359
Query: 241 -----CCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNI-V 294
CVR KE G+E+ ++ + ++ ++K G + A+ F+E K I
Sbjct: 360 MDEALSCVRKMKE-------EGIEMSLVTYSVIVGGFSKAGHAEAADYWFDE--AKRIHK 410
Query: 295 AWNAMIGGYAINGH----FLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCI 350
NA I G I H +E L R E+ I I + + T+++G +
Sbjct: 411 TLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAI---------YHTMMDGYTM 461
Query: 351 -----HGYAIRKM-----FLPHLVLETALVDMYGKCGQLKFAECVFGRINEK----NMVS 396
G + K F P +V L+++Y K G++ A V + E+ N+ +
Sbjct: 462 VADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKT 521
Query: 397 WNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYIT 456
++ +I +V+ A +F + + +KPD + +I+ A+ + + Q +
Sbjct: 522 YSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQ 581
Query: 457 KLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMS----FKNLVSWNTMIMAYAIHGFGT 512
KL T T I++ YAK GD++ + FD M + ++N +I
Sbjct: 582 KLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQME 641
Query: 513 ISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCM 572
++++ M G+ NE T+ ++ + G + +E F ++ + +D I Y +
Sbjct: 642 KAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQ-NEGLDVDIFTYEAL 700
Query: 573 VDLLGRTGNLDAAKQFIEEM 592
+ ++G + +A +EM
Sbjct: 701 LKACCKSGRMQSALAVTKEM 720
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 84/168 (50%), Gaps = 14/168 (8%)
Query: 70 FVDSGAMDNALYLFEKMN----QPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGID 125
V+ M+ A+ + ++M + + + I++G+++ G + +++ R++ EG+ +D
Sbjct: 634 LVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVD 693
Query: 126 NFTFPFVIKAC---GRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEK 182
FT+ ++KAC GR+ S + V ++ + R+ +V N LID + + G V A
Sbjct: 694 IFTYEALLKACCKSGRMQSAL---AVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAAD 750
Query: 183 VFEAMPLR----DLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPD 226
+ + M D+ ++ ++ GD ++ +EM LG KP+
Sbjct: 751 LIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPN 798
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE
Length = 634
Score = 103 bits (258), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 111/541 (20%), Positives = 232/541 (42%), Gaps = 29/541 (5%)
Query: 76 MDNALYLFEKMNQ----PDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPF 131
+D+A+ LF M + P +N ++ + F VI +M+ I +T+
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNI 125
Query: 132 VIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFK----FGFVEVAEKVFEAM 187
+I R + GK++K+G + I +SL++ Y V + +++ E
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 188 PLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGK 247
D +++ +++G + +++ M+ G +P+ + + G G C RG
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPN----LVTYGVVVNGLCKRGDT 241
Query: 248 EIHCQVIRN----GLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCK----NIVAWNAM 299
++ ++ +E D+++ ++ID K VD A +F EM K N+V ++++
Sbjct: 242 DLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSL 301
Query: 300 IGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMF 359
I G + ++ L M E + P+ +T L+ + K G +E + ++ I++
Sbjct: 302 ISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSI 361
Query: 360 LPHLVLETALVDMYGKCGQLKFAECVFGRINEK----NMVSWNAIIAAYVQNGRNEEALE 415
P + +LV+ + +L A+ +F + K ++V++N +I + ++ R E+ E
Sbjct: 362 DPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTE 421
Query: 416 LFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYA 475
LF + ++ L D VT +++ +++ + + + T + ++
Sbjct: 422 LFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLC 481
Query: 476 KCGDLQTARRYFDSMSFK----NLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNES 531
G L+ A FD M ++ + TMI G LF + G++PN
Sbjct: 482 NNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVV 541
Query: 532 TFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEE 591
T+ +++S L+ E + L MK D + Y ++ R G+ A+ + I E
Sbjct: 542 TYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNS-GTYNTLIRAHLRDGDKAASAELIRE 600
Query: 592 M 592
M
Sbjct: 601 M 601
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 102/453 (22%), Positives = 197/453 (43%), Gaps = 29/453 (6%)
Query: 2 AVKLSHSYFFNSYKPDDASFKQMGAPKRDLLVNPRIRKSNPTKKQMSETPKRGMIKPNSL 61
AV L Y+PD +F + L ++ + ++ +M + RG +PN +
Sbjct: 174 AVALVDQMVEMGYRPDTITFTTL---IHGLFLHNKASEAVALVDRMVQ---RG-CQPNLV 226
Query: 62 SLTRSLCEFVDSGAMDNALYLFEKMN----QPDTYIWNVIIRGFSNKGLFQEVIDFYHRM 117
+ + G D AL L KM + D I+N II + ++ + M
Sbjct: 227 TYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEM 286
Query: 118 EYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFG-F 176
E +GI + T+ +I + + ++ +I+ ++ ++ N+LID + K G F
Sbjct: 287 ETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKF 346
Query: 177 VEVAEKVFEAMPLR----DLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMIS 232
VE AEK+++ M R D+ ++N +VNG+ + K+ F+ M+ PD ++ +
Sbjct: 347 VE-AEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNT 405
Query: 233 SLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCK- 291
+ G V G E+ ++ GL D + T+LI G D A++VF +M
Sbjct: 406 LIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG 465
Query: 292 ---NIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGK 348
+I+ ++ ++ G NG ++ MQ+ + D ++ K G + +G
Sbjct: 466 VPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGW 525
Query: 349 CIHGYAIRKMFLPHLVLETALVDMYGKCGQ--LKFAECVFGRINEK----NMVSWNAIIA 402
+ K P++V ++ G C + L+ A + ++ E N ++N +I
Sbjct: 526 DLFCSLSLKGVKPNVVTYNTMIS--GLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIR 583
Query: 403 AYVQNGRNEEALELFHCLRNQTLKPDAVTIASI 435
A++++G + EL +R+ DA TI +
Sbjct: 584 AHLRDGDKAASAELIREMRSCRFVGDASTIGLV 616
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 103/505 (20%), Positives = 204/505 (40%), Gaps = 67/505 (13%)
Query: 79 ALYLFEKM----NQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIK 134
AL L KM +P + ++ G+ + + + +M G D TF +I
Sbjct: 139 ALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIH 198
Query: 135 ACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLR---- 190
E + ++++ G ++ +++ K G ++A + M
Sbjct: 199 GLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEA 258
Query: 191 DLVSWNCMVNG---YRVIGDGLKSLMCFKEMLGLGEKPDRL---SMISSLGGCSIGCCVR 244
D+V +N +++ YR + D L FKEM G +P+ + S+IS L CS G
Sbjct: 259 DVVIFNTIIDSLCKYRHVDDALN---LFKEMETKGIRPNVVTYSSLISCL--CSYGRW-S 312
Query: 245 GGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCK----NIVAWNAMI 300
++ +I + +++ +LID + K GK AE+++++M + +I +N+++
Sbjct: 313 DASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLV 372
Query: 301 GGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFL 360
G+ ++ ++ + M + PD +T L+ K + +G + + +
Sbjct: 373 NGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLV 432
Query: 361 PHLVLETALVDMYGKCGQLKFAECVFGRINEK----NMVSWNAIIAAYVQNGRNEEALEL 416
V T L+ G A+ VF ++ ++++++ ++ NG+ E+ALE+
Sbjct: 433 GDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEV 492
Query: 417 FHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAK 476
F ++ +K D I+ Y T +E K
Sbjct: 493 FDYMQKSEIKLD----------------------IYIYTTMIE-------------GMCK 517
Query: 477 CGDLQTARRYFDSMSFK----NLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNEST 532
G + F S+S K N+V++NTMI + L +MK++G PN T
Sbjct: 518 AGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGT 577
Query: 533 FVSLLSSCSISGLVNEGWELFNSMK 557
+ +L+ + G EL M+
Sbjct: 578 YNTLIRAHLRDGDKAASAELIREMR 602
Score = 70.5 bits (171), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 94/456 (20%), Positives = 178/456 (39%), Gaps = 71/456 (15%)
Query: 229 SMISSLGGCSIGCCVRGGKEIHCQVIRNGL---ELD-----------------IMVQTSL 268
S I G C G G + +++RNGL +LD I+ L
Sbjct: 32 SSIDLCGMCYWGRAFSSGSGDYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKL 91
Query: 269 IDMYAKCGKVDYAERVFNEMTCKNIV----AWNAMIGGYAINGHFLESFTCLKRMQEDNL 324
+ AK K D + +M IV +N +I + + L +M +
Sbjct: 92 LSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGY 151
Query: 325 IPDAITMINLL-------------------------PSCSKFGTLLEGKCIHGYAIRKMF 359
P +T+ +LL P F TL+ G +H A +
Sbjct: 152 EPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVA 211
Query: 360 L----------PHLVLETALVDMYGKCGQLKFAECVFGRIN----EKNMVSWNAIIAAYV 405
L P+LV +V+ K G A + ++ E ++V +N II +
Sbjct: 212 LVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLC 271
Query: 406 QNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTF 465
+ ++AL LF + + ++P+ VT +S++ S+ Q+ + + + +++ N
Sbjct: 272 KYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLV 331
Query: 466 TSNAIVYMYAKCGDLQTARRYFDSMSFK----NLVSWNTMIMAYAIHGFGTISIQLFSRM 521
T NA++ + K G A + +D M + ++ ++N+++ + +H + Q+F M
Sbjct: 332 TFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFM 391
Query: 522 KQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGN 581
P+ T+ +L+ S V +G ELF M + + Y ++ L G+
Sbjct: 392 VSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVT-YTTLIQGLFHDGD 450
Query: 582 LDAAKQFIEEM---PLVPTARIWGSLLTASRNNNDI 614
D A++ ++M + P + LL NN +
Sbjct: 451 CDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKL 486
>AT1G63400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23507320-23509053 FORWARD
Length = 577
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 99/536 (18%), Positives = 234/536 (43%), Gaps = 48/536 (8%)
Query: 73 SGAMDNALYLFEKMNQ----PDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFT 128
S +D+A+ LF M + P + +N ++ + F VI +M+ GI + +T
Sbjct: 63 SMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYT 122
Query: 129 FPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMP 188
+ +I R + GK++K+G + I +SL++ Y +++ +A+
Sbjct: 123 YNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCH------GKRISDAVA 176
Query: 189 LRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKE 248
L D +M+ +G +PD ++ + + G +
Sbjct: 177 LVD-------------------------QMVEMGYRPDTITFTTLIHGLFLHNKASEAVA 211
Query: 249 IHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTC----KNIVAWNAMIGGYA 304
+ ++++ G + +++ +++ K G +D A + N+M N+V ++ +I
Sbjct: 212 LVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLC 271
Query: 305 INGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLV 364
H ++ M+ + P+ IT +L+ + + + I + P++V
Sbjct: 272 KYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVV 331
Query: 365 LETALVDMYGKCGQLKFAECVFG----RINEKNMVSWNAIIAAYVQNGRNEEALELFHCL 420
AL+D + K G+L AE ++ R + ++ +++++I + + R +EA +F +
Sbjct: 332 TFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 391
Query: 421 RNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDL 480
++ P+ VT +++ + + + E ++ +++ L NT T +++ + + D
Sbjct: 392 ISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDC 451
Query: 481 QTARRYFDSM----SFKNLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSL 536
A+ F M N++++NT++ +G ++ +F ++++ +EP T+ +
Sbjct: 452 DNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIM 511
Query: 537 LSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEM 592
+ +G V +GW+LF S+ + + + Y M+ R G + A +M
Sbjct: 512 IEGMCKAGKVEDGWDLFCSLSLK-GVKPDVIIYNTMISGFCRKGLKEEADALFRKM 566
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/393 (19%), Positives = 170/393 (43%), Gaps = 31/393 (7%)
Query: 176 FVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLG 235
+ E+ +M L D + + G V L S+ F ++L K + ++ SLG
Sbjct: 53 YREILRNGLHSMKLDDAIG----LFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLG 108
Query: 236 GCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTC----K 291
++ R G+ ++ LI+ + + ++ A + +M
Sbjct: 109 E---------------KMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEP 153
Query: 292 NIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIH 351
+IV ++++ GY ++ + +M E PD IT L+ E +
Sbjct: 154 SIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALV 213
Query: 352 GYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRIN----EKNMVSWNAIIAAYVQN 407
+++ P+LV +V+ K G + A + ++ E N+V ++ +I + +
Sbjct: 214 DRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKY 273
Query: 408 GRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTS 467
++AL LF + N+ ++P+ +T +S++ S+ ++ + + + +++ N T
Sbjct: 274 RHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTF 333
Query: 468 NAIVYMYAKCGDLQTARRYFDSMSFK----NLVSWNTMIMAYAIHGFGTISIQLFSRMKQ 523
NA++ + K G L A + +D M + ++ +++++I + +H + +F M
Sbjct: 334 NALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMIS 393
Query: 524 NGIEPNESTFVSLLSSCSISGLVNEGWELFNSM 556
PN T+ +L++ + ++EG ELF M
Sbjct: 394 KDCFPNVVTYNTLINGFCKAKRIDEGVELFREM 426
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 85/446 (19%), Positives = 187/446 (41%), Gaps = 58/446 (13%)
Query: 2 AVKLSHSYFFNSYKPDDASFKQMGAPKRDLLVNPRIRKSNPTKKQMSETPKRGMIKPNSL 61
AV L Y+PD +F + L ++ + ++ +M + RG +PN +
Sbjct: 174 AVALVDQMVEMGYRPDTITFTTL---IHGLFLHNKASEAVALVDRMVQ---RG-CQPNLV 226
Query: 62 SLTRSLCEFVDSGAMDNALYLFEKMN----QPDTYIWNVIIRGFSNKGLFQEVIDFYHRM 117
+ + G +D A L KM + + I++ +I + ++ + M
Sbjct: 227 TYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEM 286
Query: 118 EYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFV 177
E +G+ + T+ +I + + ++ +I+ ++ ++ N+LID + K G +
Sbjct: 287 ENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKL 346
Query: 178 EVAEKVFEAMPLR----DLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISS 233
AEK+++ M R D+ +++ ++NG+ + ++ F+ M+ P+ ++ +
Sbjct: 347 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTL 406
Query: 234 LGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTC--- 290
+ G + G E+ ++ + GL + + T+LI + + D A+ VF +M
Sbjct: 407 INGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGV 466
Query: 291 -KNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKC 349
NI+ +N ++ G NG ++ + +Q + P T + ++EG C
Sbjct: 467 HPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYT----------YNIMIEGMC 516
Query: 350 IHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINEK----NMVSWNAIIAAYV 405
K G+++ +F ++ K +++ +N +I+ +
Sbjct: 517 -------------------------KAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFC 551
Query: 406 QNGRNEEALELFHCLRNQTLKPDAVT 431
+ G EEA LF +R PD+ T
Sbjct: 552 RKGLKEEADALFRKMREDGPLPDSGT 577
>AT2G32630.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:13844834-13846708 FORWARD
Length = 624
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 110/468 (23%), Positives = 201/468 (42%), Gaps = 54/468 (11%)
Query: 142 FIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLR----DLVSWNC 197
F EG +V ++K GL D C + K +++ ++F M + S
Sbjct: 170 FEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSLTI 229
Query: 198 MVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNG 257
+V G G+ KS KE G KP+ + + + G + + + ++G
Sbjct: 230 VVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDG 289
Query: 258 LELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIVA----WNAMIGGYAINGHFLESF 313
+ + + T L+++ K GK+ AE++F+EM + I + + ++I S+
Sbjct: 290 VVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLI-----------SW 338
Query: 314 TCLK-RMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDM 372
C K M+ L+ D +T L PS +G L++G C
Sbjct: 339 NCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVC----------------------- 375
Query: 373 YGKCGQLKFAECVFGRINEKNM----VSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPD 428
K G++ AE + + K + V +N +I Y + G +EA ++ + + + D
Sbjct: 376 --KVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQAD 433
Query: 429 AVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFD 488
T +I + L E KQ + + + +T + ++ +Y K G+++ A+R F
Sbjct: 434 VFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFV 493
Query: 489 SMSFK----NLVSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISG 544
MS K N +++N MI AY G + +L + M+ NG++P+ T+ SL+ I+
Sbjct: 494 EMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIAD 553
Query: 545 LVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEM 592
V+E LF+ M + +D Y M+ L + G D A +EM
Sbjct: 554 NVDEAMRLFSEMGLK-GLDQNSVTYTVMISGLSKAGKSDEAFGLYDEM 600
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 88/468 (18%), Positives = 203/468 (43%), Gaps = 30/468 (6%)
Query: 95 NVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIK 154
+++ R + + G+F+E + + M +G+ ID + + A + ++ +++
Sbjct: 158 DLVFRVYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVD 217
Query: 155 IGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLR----DLVSWNCMVNGYRVIGD--G 208
G+ +Y +++ + G VE ++K+ + ++ + ++N ++N Y D G
Sbjct: 218 SGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSG 277
Query: 209 LKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGK-----EIHCQVIRNGLELDIM 263
++ ++ + G+ +++ L V+ GK ++ ++ G+E D+
Sbjct: 278 VEGVLKVMKKDGVVYNKVTYTLLMELS-------VKNGKMSDAEKLFDEMRERGIESDVH 330
Query: 264 VQTSLIDMYAKCGKVDYAERVFNEMTCKNI----VAWNAMIGGYAINGHFLESFTCLKRM 319
V TSLI + G + A +F+E+T K + + A+I G G + + M
Sbjct: 331 VYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEM 390
Query: 320 QEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQL 379
Q + + L+ + G + E I+ +K F + + + + +
Sbjct: 391 QSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRY 450
Query: 380 KFAECVFGRINEKNM----VSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASI 435
A+ R+ E + VS+ +I Y + G EEA LF + ++ ++P+A+T +
Sbjct: 451 DEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVM 510
Query: 436 LPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNL 495
+ AY + + E +++ A + + +++T ++++ ++ A R F M K L
Sbjct: 511 IYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGL 570
Query: 496 ----VSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSS 539
V++ MI + G + L+ MK+ G + + +L+ S
Sbjct: 571 DQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALIGS 618
>AT5G59900.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:24123983-24126706 REVERSE
Length = 907
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 121/539 (22%), Positives = 221/539 (41%), Gaps = 57/539 (10%)
Query: 74 GAMDNALYLFEKMN----QPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTF 129
G ++ AL L +++ P+ +++N +I F E + RM G+ ++ T+
Sbjct: 346 GKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTY 405
Query: 130 PFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPL 189
+I R G+++ GL +Y NSLI+ + KFG + AE M
Sbjct: 406 SILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMIN 465
Query: 190 RDL----VSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRG 245
+ L V++ ++ GY G K+L + EM G G P + + L G +R
Sbjct: 466 KKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRD 525
Query: 246 GKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCKNIV----AWNAMIG 301
++ ++ ++ + + +I+ Y + G + A EMT K IV ++ +I
Sbjct: 526 AVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIH 585
Query: 302 GYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLE--------------- 346
G + G E+ + + + N + I LL + G L E
Sbjct: 586 GLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDL 645
Query: 347 -----GKCIHG---YAIRKMFL------------PHLVLETALVDMYGKCGQLKFAECVF 386
G I G + RK+F P V+ T+++D K G K A ++
Sbjct: 646 DLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIW 705
Query: 387 G-RINE---KNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAE- 441
INE N V++ A+I + G EA L ++ + P+ VT L +
Sbjct: 706 DLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKG 765
Query: 442 LATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSM----SFKNLVS 497
+ + ++H I K L +NT T N ++ + + G ++ A M + ++
Sbjct: 766 EVDMQKAVELHNAILK-GLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCIT 824
Query: 498 WNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSM 556
+ TMI +I+L++ M + GI P+ + +L+ C ++G + + EL N M
Sbjct: 825 YTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEM 883
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 129/596 (21%), Positives = 248/596 (41%), Gaps = 90/596 (15%)
Query: 88 QPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKK 147
P + ++ G +G +E ++ R+ G+ + F + +I + + F E +
Sbjct: 329 SPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAEL 388
Query: 148 VHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVA-----EKVFEAMPLRDLVSWNCMVNGY 202
+ ++ KIGL + + LIDM+ + G ++ A E V + L + +N ++NG+
Sbjct: 389 LFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKL-SVYPYNSLINGH 447
Query: 203 RVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGG-CSIGCCVRGGKEIHCQVIRNGLELD 261
GD + EM+ +P ++ S +GG CS G + + H ++ G+
Sbjct: 448 CKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYH-EMTGKGIAPS 506
Query: 262 IMVQTSLIDMYAKCGKVDYAERVFNEMTCKNI----VAWNAMIGGYAINGHFLESFTCLK 317
I T+L+ + G + A ++FNEM N+ V +N MI GY G ++F LK
Sbjct: 507 IYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLK 566
Query: 318 RMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIR-KMFLPHL---------VLET 367
M E ++PD + + L+ G C+ G A K+F+ L + T
Sbjct: 567 EMTEKGIVPDTYS----------YRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYT 616
Query: 368 ALVDMYGKCGQLKFAECV--------------------------------FGRINE---- 391
L+ + + G+L+ A V FG + E
Sbjct: 617 GLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDR 676
Query: 392 ---KNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSEC 448
+ V + ++I A + G +EA ++ + N+ P+ VT +++ + V+E
Sbjct: 677 GLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEA 736
Query: 449 KQIHAYITKLELSSNTFTSNAIVYMYAKCG-DLQTARRYFDSM---SFKNLVSWNTMIMA 504
+ + + + + N T + + K D+Q A +++ N ++N +I
Sbjct: 737 EVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRG 796
Query: 505 YAIHGFGTISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMK----MDY 560
+ G + +L +RM +G+ P+ T+ ++++ V + EL+NSM
Sbjct: 797 FCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPD 856
Query: 561 NIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEM---PLVP---TARIWGSLLTASRN 610
+ Y +GC V G + A + EM L+P T+R S T+S++
Sbjct: 857 RVAYNTLIHGCCV-----AGEMGKATELRNEMLRQGLIPNNKTSRTTTSNDTSSKS 907
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 106/516 (20%), Positives = 211/516 (40%), Gaps = 44/516 (8%)
Query: 248 EIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCK----NIVAWNAMIGGY 303
E+ ++ G+ D+ + T +I + + A+ + M NIV +N +I G
Sbjct: 213 ELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGL 272
Query: 304 AINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHL 363
E+ K + +L PD +T L+ K G + + F P
Sbjct: 273 CKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSE 332
Query: 364 VLETALVDMYGKCGQLKFAECVFGRINE----KNMVSWNAIIAAYVQNGRNEEALELFHC 419
++LV+ K G+++ A + R+ + N+ +NA+I + + + EA LF
Sbjct: 333 AAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDR 392
Query: 420 LRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGD 479
+ L+P+ VT + ++ + + + L + + N+++ + K GD
Sbjct: 393 MGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGD 452
Query: 480 LQTARRYFDSMSFKNL----VSWNTMIMAYAIHGFGTISIQLFSRMKQNGIEPNESTFVS 535
+ A + M K L V++ +++ Y G +++L+ M GI P+ TF +
Sbjct: 453 ISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTT 512
Query: 536 LLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEMP-- 593
LLS +GL+ + +LFN M ++N+ Y M++ G++ A +F++EM
Sbjct: 513 LLSGLFRAGLIRDAVKLFNEMA-EWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEK 571
Query: 594 -LVPTAR-----IWGSLLTASRNNNDIFFAEFAAKHILSHDNDNTGCYVLLANMYAEAGR 647
+VP I G LT + +F + N CY L + + G+
Sbjct: 572 GIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNC----ELNEICYTGLLHGFCREGK 627
Query: 648 WEDVEQIKLVMKKKGLAKTVDCCTVESKGKSQKFINNNKSHQQAYMIYDVLDIILKKIGE 707
E+ + M ++G+ + C V I+ + H+ + + +L +
Sbjct: 628 LEEALSVCQEMVQRGVDLDLVCYGV--------LIDGSLKHKDRKLFFGLL--------K 671
Query: 708 DVYIHSLSKFRPADVIKKKMKSPQNHSVKLAICFGL 743
+++ L +P DVI M ++ + FG+
Sbjct: 672 EMHDRGL---KPDDVIYTSMIDAKSKTGDFKEAFGI 704
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 109/490 (22%), Positives = 205/490 (41%), Gaps = 56/490 (11%)
Query: 62 SLTRSLCEFVDSGAMDNALY-LFEKMNQPDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYE 120
SL C+F D A + + + K +P + ++ G+ +KG + + YH M +
Sbjct: 442 SLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGK 501
Query: 121 GIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVA 180
GI +TF ++ L + GL RD F E+A
Sbjct: 502 GIAPSIYTFTTLLSG----------------LFRAGLIRDAVKL-----------FNEMA 534
Query: 181 EKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIG 240
E + P R V++N M+ GY GD K+ KEM G PD S + G +
Sbjct: 535 E--WNVKPNR--VTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLT 590
Query: 241 CCVRGGKEIHCQVIRNGL-----ELDIMVQTSLIDMYAKCGKVDYAERVFNEMTCK---- 291
G+ +V +GL EL+ + T L+ + + GK++ A V EM +
Sbjct: 591 -----GQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDL 645
Query: 292 NIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIH 351
++V + +I G + F LK M + L PD + +++ + SK G E I
Sbjct: 646 DLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIW 705
Query: 352 GYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINE----KNMVSWNAIIAAYVQN 407
I + +P+ V TA+++ K G + AE + ++ N V++ + +
Sbjct: 706 DLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKG 765
Query: 408 GRN-EEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFT 466
+ ++A+EL + + + L + T ++ + + E ++ + +S + T
Sbjct: 766 EVDMQKAVELHNAIL-KGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCIT 824
Query: 467 SNAIVYMYAKCGDLQTARRYFDSMSFKNL----VSWNTMIMAYAIHGFGTISIQLFSRMK 522
++ + D++ A ++SM+ K + V++NT+I + G + +L + M
Sbjct: 825 YTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEML 884
Query: 523 QNGIEPNEST 532
+ G+ PN T
Sbjct: 885 RQGLIPNNKT 894
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 124/644 (19%), Positives = 253/644 (39%), Gaps = 70/644 (10%)
Query: 89 PDTYIWNVIIRGFSNKGLFQEVIDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKV 148
P+ + ++ G F ++ ++ M GI D + + VI++ L K++
Sbjct: 190 PEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEM 249
Query: 149 HGKLIKIGLDRDIYVCNSLIDMYFKFGFVEVAEKVFEAMPLR----------DLVSWNCM 198
+ G D +I N LID K +KV+EA+ ++ D+V++ +
Sbjct: 250 IAHMEATGCDVNIVPYNVLIDGLCK------KQKVWEAVGIKKDLAGKDLKPDVVTYCTL 303
Query: 199 VNGYRVIGDGLKSLMCFKEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGL 258
V G + + L EML L P ++ S + G + + +V+ G+
Sbjct: 304 VYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGV 363
Query: 259 ELDIMVQTSLIDMYAKCGKVDYAERVFNEM----TCKNIVAWNAMIGGYAINGHFLESFT 314
++ V +LID K K AE +F+ M N V ++ +I + G + +
Sbjct: 364 SPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALS 423
Query: 315 CLKRMQEDNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYG 374
L M + L +L+ KFG + + I K P +V T+L+ Y
Sbjct: 424 FLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYC 483
Query: 375 KCGQLKFAECVFGRINEKNMV----SWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAV 430
G++ A ++ + K + ++ +++ + G +A++LF+ + +KP+ V
Sbjct: 484 SKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRV 543
Query: 431 TIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSM 490
T ++ Y E +S+ + +T+ + +T++ +++ G A+ + D +
Sbjct: 544 TYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGL 603
Query: 491 SFKN---------------------------------------LVSWNTMIMAYAIHGFG 511
N LV + +I H
Sbjct: 604 HKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDR 663
Query: 512 TISIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWELFNSMKMDYNIDYGIEHYGC 571
+ L M G++P++ + S++ + S +G E + +++ M + + + Y
Sbjct: 664 KLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVT-YTA 722
Query: 572 MVDLLGRTGNLDAAKQFIEEM-PL--VPTARIWGSLL-TASRNNNDIFFAEFAAKHILSH 627
+++ L + G ++ A+ +M P+ VP +G L ++ D+ A IL
Sbjct: 723 VINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKG 782
Query: 628 DNDNTGCYVLLANMYAEAGRWEDVEQIKLVMKKKGLAKTVDCCT 671
NT Y +L + GR E+ + L+ + G + DC T
Sbjct: 783 LLANTATYNMLIRGFCRQGRIEEASE--LITRMIGDGVSPDCIT 824
>AT3G16710.1 | Symbols: | INVOLVED IN: biological_process unknown;
LOCATED IN: cellular_component unknown; EXPRESSED IN: 10
plant structures; EXPRESSED DURING: LP.10 ten leaves
visible, petal differentiation and expansion stage, D
bilateral stage, E expanded cotyledon stage; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT5G41170.1); Has 25882 Blast hits to 6002
proteins in 187 species: Archae - 3; Bacteria - 22;
Metazoa - 744; Fungi - 522; Plants - 23419; Viruses - 0;
Other Eukaryotes - 1172 (source: NCBI BLink). |
chr3:5690020-5691543 FORWARD
Length = 507
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/368 (23%), Positives = 165/368 (44%), Gaps = 48/368 (13%)
Query: 214 CF-KEMLGLGEKPDRLSMISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMY 272
CF +M+ LG +PD ++ S L G + + Q++ G + +++ T+LI
Sbjct: 139 CFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCL 198
Query: 273 AKCGKVDYAERVFNEM----TCKNIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDA 328
K +++A +FN+M + N+V +NA++ G G + ++ L+ M + + P+
Sbjct: 199 CKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNV 258
Query: 329 ITMINLL-------------------------PSCSKFGTLLEGKCIHGY--AIRKMFL- 360
IT L+ P +G+L+ G C++G R+MF
Sbjct: 259 ITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYL 318
Query: 361 -------PHLVLETALVDMYGKCGQLKFAECVFGRINEK----NMVSWNAIIAAYVQNGR 409
P+ V+ T L+ + K +++ +F +++K N +++ +I Y GR
Sbjct: 319 MERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGR 378
Query: 410 NEEALELFHCLRNQTLKPDAVTIASILPAYAELATVSECKQIHAYITKLELSSNTFTSNA 469
+ A E+F+ + ++ PD T +L V + I Y+ K E+ N T
Sbjct: 379 PDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTI 438
Query: 470 IVYMYAKCGDLQTARRYFDSMSFK----NLVSWNTMIMAYAIHGFGTISIQLFSRMKQNG 525
I+ K G ++ A F S+ K N++++ TMI + G + LF +MK++G
Sbjct: 439 IIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDG 498
Query: 526 IEPNESTF 533
PNES +
Sbjct: 499 FLPNESVY 506
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/340 (21%), Positives = 146/340 (42%), Gaps = 15/340 (4%)
Query: 266 TSLIDMYAKCGKVDYAERVFNEMTCKNI----VAWNAMIGGYAINGHFLESFTCLKRMQE 321
T L+ + AK + D +F +M I N ++ ++ + L +M +
Sbjct: 87 TRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMK 146
Query: 322 DNLIPDAITMINLLPSCSKFGTLLEGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKF 381
PD +T +LL + + + + + F P++V T L+ K L
Sbjct: 147 LGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNH 206
Query: 382 AECVFGRI----NEKNMVSWNAIIAAYVQNGRNEEALELFHCLRNQTLKPDAVTIASILP 437
A +F ++ + N+V++NA++ + GR +A L + + ++P+ +T +++
Sbjct: 207 AVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALID 266
Query: 438 AYAELATVSECKQIHAYITKLELSSNTFTSNAIVYMYAKCGDLQTARRYFDSMSFKNLVS 497
A+ ++ + E K+++ + ++ + + FT +++ G L AR+ F M +N
Sbjct: 267 AFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLME-RNGCY 325
Query: 498 WNTMIMAYAIHGFGTI-----SIQLFSRMKQNGIEPNESTFVSLLSSCSISGLVNEGWEL 552
N +I IHGF +++F M Q G+ N T+ L+ + G + E+
Sbjct: 326 PNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEV 385
Query: 553 FNSMKMDYNIDYGIEHYGCMVDLLGRTGNLDAAKQFIEEM 592
FN M I Y ++D L G ++ A E M
Sbjct: 386 FNQMS-SRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYM 424
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/346 (19%), Positives = 151/346 (43%), Gaps = 45/346 (13%)
Query: 57 KPNSLSLT---RSLCEFVDSGAMDNALYLFEKM----NQPDTYIWNVIIRGFSNKGLFQE 109
KPN ++ T R LC+ + +++A+ LF +M ++P+ +N ++ G G + +
Sbjct: 185 KPNVVTYTTLIRCLCK---NRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGD 241
Query: 110 VIDFYHRMEYEGIGIDNFTFPFVIKACGRLLSFIEGKKVHGKLIKIGLDRDIYVCNSLID 169
M I + TF +I A ++ +E K+++ +I++ + D++ SLI+
Sbjct: 242 AAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLIN 301
Query: 170 MYFKFGFVEVAEKVFEAMPLRDLVSWNCMVNGYRVIGDGLKSLMCFKEMLGLGEKPDRLS 229
+G ++ A ++F M NG C+ P+ +
Sbjct: 302 GLCMYGLLDEARQMFYLMER----------NG------------CY---------PNEVI 330
Query: 230 MISSLGGCSIGCCVRGGKEIHCQVIRNGLELDIMVQTSLIDMYAKCGKVDYAERVFNEMT 289
+ + G V G +I ++ + G+ + + T LI Y G+ D A+ VFN+M+
Sbjct: 331 YTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMS 390
Query: 290 CK----NIVAWNAMIGGYAINGHFLESFTCLKRMQEDNLIPDAITMINLLPSCSKFGTLL 345
+ +I +N ++ G NG ++ + M++ + + +T ++ K G +
Sbjct: 391 SRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVE 450
Query: 346 EGKCIHGYAIRKMFLPHLVLETALVDMYGKCGQLKFAECVFGRINE 391
+ + K P+++ T ++ + + G + A+ +F ++ E
Sbjct: 451 DAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKE 496