Jatropha Genome Database

JcCA0316451.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0316451.20 + phase: 0 
         (360 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G18890.1 | Symbols:  | binding / catalytic/ coenzyme binding ...   445   e-125
AT2G34460.1 | Symbols:  | flavin reductase-related | chr2:145296...   133   2e-31
AT3G46780.1 | Symbols: PTAC16 | PTAC16 (PLASTID TRANSCRIPTIONALL...    84   1e-16
AT4G31530.1 | Symbols:  | binding / catalytic | chr4:15282281-15...    79   4e-15
AT5G02240.1 | Symbols:  | binding / catalytic/ coenzyme binding ...    77   2e-14
AT2G37660.1 | Symbols:  | binding / catalytic/ coenzyme binding ...    76   4e-14
AT5G18660.1 | Symbols: PCB2 | PCB2 (PALE-GREEN AND CHLOROPHYLL B...    60   2e-09

>AT3G18890.1 | Symbols:  | binding / catalytic/ coenzyme binding |
           chr3:6511169-6514729 FORWARD
          Length = 641

 Score =  445 bits (1145), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 216/310 (69%), Positives = 258/310 (83%), Gaps = 2/310 (0%)

Query: 20  RSGFLEKTSVRGHFLRFPSFNKYPHARKLKSFDIKAQASGVTKYSSGAVEATPKEVDVKD 79
           R GFL +       +RF  F  +  + K +SFD+  +ASG  + SS   EA+P  ++ K+
Sbjct: 21  RKGFLLQRWKTNRIVRFSGFKNHSVSGKSRSFDLSLRASGPIRASSVVTEASPTNLNSKE 80

Query: 80  DNLAFVAGATGRVGSRTVRELLKLGFQVRAGVRSAQKAQSLVQSVKQMKLNG--EGSQYV 137
           ++L FVAGATG+VGSRTVRELLKLGF+VRAGVRSAQ+A SLVQSVK+MKL    EG+Q V
Sbjct: 81  EDLVFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAGSLVQSVKEMKLQNTDEGTQPV 140

Query: 138 EKLELVECDLEKPNEIGPALGNASVVICCIGASEKEVFDVTGPYRIDYQATKNLIDAASA 197
           EKLE+VECDLEK + I PALGNASV+ICCIGASEKE+ D+TGPYRIDY ATKNL+DAA++
Sbjct: 141 EKLEIVECDLEKKDSIQPALGNASVIICCIGASEKEISDITGPYRIDYLATKNLVDAATS 200

Query: 198 AKVKHFIMVSSLGTNKVGFPAAILNLFWGVLIWKRQAEEALIASGVPYTIVRPGGMERPT 257
           AKV +FI+V+SLGTNK GFPAAILNLFWGVL WKR+AEEALI SG+ Y IVRPGGMERPT
Sbjct: 201 AKVNNFILVTSLGTNKFGFPAAILNLFWGVLCWKRKAEEALIESGLNYAIVRPGGMERPT 260

Query: 258 DAYKETHNITLSEEDTLFGGQVSNLQVAELIAVMAKNRGLSYCKVVEVIAETTAPLTPME 317
           DAYKETHN+TL+ +DTLFGGQVSNLQVAEL+A MAKN  LS+ K+VEV+AETTAPLTP+E
Sbjct: 261 DAYKETHNLTLALDDTLFGGQVSNLQVAELLACMAKNPQLSFSKIVEVVAETTAPLTPIE 320

Query: 318 ELLAKIPSQR 327
           +LL KIPS+R
Sbjct: 321 KLLEKIPSKR 330


>AT2G34460.1 | Symbols:  | flavin reductase-related |
           chr2:14529635-14530732 FORWARD
          Length = 280

 Score =  133 bits (335), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 93/251 (37%), Positives = 136/251 (54%), Gaps = 28/251 (11%)

Query: 84  FVAGATGRVGSRTVRELLKLGFQVRAGVRSAQKAQSLVQSVKQMKLNGEGSQYVEKLELV 143
           FVAGATG+ G R V +LL  GF V+AGVR  +KA++  +                 L++V
Sbjct: 50  FVAGATGQTGKRIVEQLLSRGFAVKAGVRDVEKAKTSFKDDPS-------------LQIV 96

Query: 144 ECDL-EKPNEIGPALGNAS-VVICCIGASEKEVFDVTGPYRIDYQATKNLIDAASAAKVK 201
             D+ E P+++   +G+ S  VIC  G   +  FD+  P+++D   T NL+DA     V+
Sbjct: 97  RADVTEGPDKLAEVIGDDSQAVICATGF--RPGFDIFTPWKVDNFGTVNLVDACRKQGVE 154

Query: 202 HFIMVSSLGTNKVGF-----PAAI-LNLFWGVLIWKRQAEEALIASGVPYTIVRPGGMER 255
            F++VSS+  N         PA + LNLF   L+ K QAE+ +  SG+ YTIVRPGG++ 
Sbjct: 155 KFVLVSSILVNGAAMGQILNPAYLFLNLFGLTLVAKLQAEKYIKKSGINYTIVRPGGLKN 214

Query: 256 PTDAYKETHNITLSEEDTLFGGQVSNLQVAELIAVMAKNRGLSYCKVVEVIAETTAPLTP 315
                  T N+ +  EDTL+ G +S   VAE +AV A  +  S  KVVE++A   AP   
Sbjct: 215 DP----PTGNVVMEPEDTLYEGSISRDLVAE-VAVEALLQEESSFKVVEIVARAEAPKRS 269

Query: 316 MEELLAKIPSQ 326
            ++L A +  Q
Sbjct: 270 YKDLFASVKGQ 280


>AT3G46780.1 | Symbols: PTAC16 | PTAC16 (PLASTID TRANSCRIPTIONALLY
           ACTIVE 16); binding / catalytic | chr3:17228766-17231021
           FORWARD
          Length = 510

 Score = 84.0 bits (206), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 91/294 (30%), Positives = 138/294 (46%), Gaps = 39/294 (13%)

Query: 52  DIKAQASGVTKYSSGAVEATPKEVDVKDDNLAFVAGATGRVGSRTVRELLKLGFQVRAGV 111
           D+K+    VT  S+G V    ++   KD    FVAGATG+ G R  + LL+ GF VRAGV
Sbjct: 66  DMKSLIPVVTNPSTGLVFGNNRK---KDPGTIFVAGATGQAGIRIAQTLLQRGFSVRAGV 122

Query: 112 RSAQKAQSLVQSVKQMKL--NGEGSQYVEKLELVECDLEKPNEIGPALGNASVVICCIGA 169
                AQ L +     K+  N E    V++L  V+   +    I  A+GNA+ V+  +GA
Sbjct: 123 PDLGAAQDLARVAATYKILSNDE----VKRLNAVQSPFQDAESIAKAIGNATKVVVTVGA 178

Query: 170 SEKEVFDVTGPYRIDYQATKN----LIDAASAAKVKHFIMVSSLGTNKVGFPAAILN--- 222
           +E       GP   D Q + +    ++ AA  A V H  +V   GT   G    +L+   
Sbjct: 179 TE------NGP---DAQVSTSDALLVVQAAELAGVSHVAIVYD-GTIS-GSTYNVLDGIT 227

Query: 223 LFWGVLIWKRQAE------EALIASGVPYTIVRPGGME--RPTDAYK----ETHNITLSE 270
            F+G L  K Q        E +  + V YT+++    E   P  AY        + + S 
Sbjct: 228 SFFGNLFAKSQPLTISDLIEKVAQTDVAYTLIKTSLTEDFSPEKAYNVVVSAEGSNSGSG 287

Query: 271 EDTLFGGQVSNLQVAELIAVMAKNRGLSYCKVVEVIAETTAPLTPMEELLAKIP 324
             +    +V  L++A L+A +  N  ++  KVVEV  + +AP  P++EL + IP
Sbjct: 288 SSSSEAYKVPKLKIASLVADIFANTAVAENKVVEVSTDPSAPSRPVDELFSVIP 341


>AT4G31530.1 | Symbols:  | binding / catalytic |
           chr4:15282281-15284064 FORWARD
          Length = 324

 Score = 79.0 bits (193), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 65/203 (32%), Positives = 103/203 (50%), Gaps = 30/203 (14%)

Query: 100 LLKLGFQVRAGVRSAQKAQSLVQSVKQMKLNGEGSQYVEKLELVECDLEKPNEIGPAL-G 158
           LLK   + R  +R   KA          KL G+  +Y   L++V+ D     ++ P++  
Sbjct: 93  LLKRNIRSRLLLRDLDKA---------TKLFGKQDEY--SLQVVKGDTRNAEDLDPSMFE 141

Query: 159 NASVVICCIGAS---EKEVFDVTGPYRIDYQATKNLIDAASAAKVKHFIMVSSLGTNKVG 215
             + VIC  G +    K   +   P ++D++  KNLI A  ++ VK  ++VSS+G  K  
Sbjct: 142 GVTHVICTTGTTAFPSKRWNEENTPEKVDWEGVKNLISALPSS-VKRVVLVSSVGVTKSN 200

Query: 216 -FPAAILNLFWGVLIWKRQAEEALIASGVPYTIVRPGGM-ERPTDAYK----------ET 263
             P +I+NLF GVL +K+  E+ L  SG+P+TI+RPG + + P  +Y           E 
Sbjct: 201 ELPWSIMNLF-GVLKYKKMGEDFLRDSGLPFTIIRPGRLTDGPYTSYDLNTLLKATAGER 259

Query: 264 HNITLSEEDTLFGGQVSNLQVAE 286
             + + + D L  G+VS L VAE
Sbjct: 260 RAVVIGQGDNLV-GEVSRLVVAE 281


>AT5G02240.1 | Symbols:  | binding / catalytic/ coenzyme binding |
           chr5:451502-452984 FORWARD
          Length = 253

 Score = 76.6 bits (187), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 74/266 (27%), Positives = 115/266 (43%), Gaps = 44/266 (16%)

Query: 84  FVAGATGRVGSRTVRELLKLG---FQVRAGVRSAQKAQSLVQSVKQMKLNGEGSQYVEKL 140
            V GA+GR G + V + LK G   F  +  VRSAQ  +         K+ GE   ++   
Sbjct: 8   LVTGASGRTG-QIVYKKLKEGSDKFVAKGLVRSAQGKE---------KIGGEADVFI--- 54

Query: 141 ELVECDLEKPNEIGPALG--NASVVICCIGASEKEVFDVTG-------------PYRIDY 185
                D+   + I PA    +A V++       K  FD T              P ++D+
Sbjct: 55  ----GDITDADSINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDW 110

Query: 186 QATKNLIDAASAAKVKHFIMVSSLGTNKVGFPAAILNLFWGVLIWKRQAEEALIASGVPY 245
              KN IDAA  A VKH ++V S+G      P   L     +L+WKR+AE+ L  SG PY
Sbjct: 111 IGQKNQIDAAKVAGVKHIVVVGSMGGTNPDHPLNKLG-NGNILVWKRKAEQYLADSGTPY 169

Query: 246 TIVRPGGMERPTDAYKE-----THNITLSEEDTLFGGQVSNLQVAELIAVMAKNRGLSYC 300
           TI+R GG+       +E        +  ++  T+    V+ + +  L+   AKN+     
Sbjct: 170 TIIRAGGLLDKEGGVRELLVGKDDELLQTDTKTVPRADVAEVCIQALLFEEAKNKAFDLG 229

Query: 301 KVVEVIAETTAPLTPMEELLAKIPSQ 326
              E    T+ P    + L +++ S+
Sbjct: 230 SKPE---GTSTPTKDFKALFSQVTSR 252


>AT2G37660.1 | Symbols:  | binding / catalytic/ coenzyme binding |
           chr2:15795481-15796977 REVERSE
          Length = 325

 Score = 75.9 bits (185), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 63/225 (28%), Positives = 103/225 (45%), Gaps = 39/225 (17%)

Query: 84  FVAGATGRVGSRTVRELLKLG--FQVRAGVRSAQKAQSLVQSVKQMKLNGEGSQYVEKLE 141
            V GA GR G    ++L +    F  R  VR+ +  +         K+NGE   ++    
Sbjct: 80  LVTGAGGRTGQIVYKKLKERSEQFVARGLVRTKESKE---------KINGEDEVFI---- 126

Query: 142 LVECDLEKPNEIGPALG--NASVVICCIGASEKEVFDVTG-------------PYRIDYQ 186
               D+     I PA+   +A V++       K  FD +              P ++D+ 
Sbjct: 127 ---GDIRDTASIAPAVEGIDALVILTSAVPQMKPGFDPSKGGRPEFFFDDGAYPEQVDWI 183

Query: 187 ATKNLIDAASAAKVKHFIMVSSLGTNKVGFP-AAILNLFWGVLIWKRQAEEALIASGVPY 245
             KN IDAA AA VK  ++V S+G   +  P  +I N    +L+WKR+AE+ L  SG+PY
Sbjct: 184 GQKNQIDAAKAAGVKQIVLVGSMGGTNINHPLNSIGNA--NILVWKRKAEQYLADSGIPY 241

Query: 246 TIVRPGGMERPTDAYKETHNITLSEEDTLFGGQVSNLQVAELIAV 290
           TI+R GG++      +E   + + ++D L   +   +  A++  V
Sbjct: 242 TIIRAGGLQDKDGGIRE---LLVGKDDELLETETRTIARADVAEV 283


>AT5G18660.1 | Symbols: PCB2 | PCB2 (PALE-GREEN AND CHLOROPHYLL B
           REDUCED 2); 3,8-divinyl protochlorophyllide a 8-vinyl
           reductase | chr5:6220872-6222125 REVERSE
          Length = 417

 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 60/221 (27%), Positives = 107/221 (48%), Gaps = 38/221 (17%)

Query: 41  KYPHARKLKSFDIKAQASGVTKYSSGAV--EATPKEVDVKDDNLAFVAGATGRVGSRTVR 98
           KY  AR LK   I +  SG+++ ++       +PK+++V       V G+TG +G   V+
Sbjct: 51  KYKRAR-LKP--ISSLDSGISEIATSPSFRNKSPKDINV------LVVGSTGYIGRFVVK 101

Query: 99  ELLKLGFQV------RAGVRSAQKAQSLVQSVKQMKLNGEGSQYVEKLELVECDLEKPNE 152
           E++K GF V      ++G+R     +   +++KQ++        V +L+++E  +E    
Sbjct: 102 EMIKRGFNVIAVAREKSGIRGKNDKE---ETLKQLQGANVCFSDVTELDVLEKSIEN--- 155

Query: 153 IGPALG-NASVVICCIGASEKEVFDVTGPYRIDYQATKNLIDAASAAKVKHFIMVSSLGT 211
               LG    VV+ C+ +    + D    ++IDY+ATKN + A      KHF+++S++  
Sbjct: 156 ----LGFGVDVVVSCLASRNGGIKD---SWKIDYEATKNSLVAGKKFGAKHFVLLSAICV 208

Query: 212 NK--VGFPAAILNLFWGVLIWKRQAEEALIASGVPYTIVRP 250
            K  + F  A L     ++    Q +     S   Y+IVRP
Sbjct: 209 QKPLLEFQRAKLKFEAELMDLAEQQD-----SSFTYSIVRP 244