Jatropha Genome Database

JcCA0316351.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0316351.20 + phase: 0 
         (137 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G21410.1 | Symbols: VHA-A2 | VHA-A2 (VACUOLAR PROTON ATPASE A...   179   4e-46
AT4G39080.1 | Symbols: VHA-A3 | VHA-A3 (VACUOLAR PROTON ATPASE A...   173   2e-44
AT2G28520.1 | Symbols: VHA-A1 | VHA-A1 (VACUOLAR PROTON ATPASE A...   149   6e-37

>AT2G21410.1 | Symbols: VHA-A2 | VHA-A2 (VACUOLAR PROTON ATPASE A2);
           ATPase | chr2:9162703-9168141 FORWARD
          Length = 821

 Score =  179 bits (454), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 84/124 (67%), Positives = 98/124 (79%)

Query: 1   MDLFRSEAMQLVQLIIPIESAHLTVSYLGDLGLLQFKDLNAEKSPFQRTYAAQIKKCGEM 60
           MDL RSE MQLVQ+I+P+ESAHLTVSYLGDLGL+QFKDLN+EKSPFQRTYAAQIK+CGEM
Sbjct: 15  MDLMRSEPMQLVQVIVPMESAHLTVSYLGDLGLVQFKDLNSEKSPFQRTYAAQIKRCGEM 74

Query: 61  ARKLRFFKEQMEKAGFSPSSKSVTQTNIDMDGXXXXXXXXXXXXXXMNANNDKLQRTYNE 120
           ARK+RFFKEQM KAG +P      + +ID+D               +NANNDKLQR+YNE
Sbjct: 75  ARKIRFFKEQMSKAGVTPKETLDRENDIDLDDVEVKLEELEAELVEINANNDKLQRSYNE 134

Query: 121 LIEY 124
           L+EY
Sbjct: 135 LVEY 138


>AT4G39080.1 | Symbols: VHA-A3 | VHA-A3 (VACUOLAR PROTON ATPASE A3);
           ATPase | chr4:18209513-18214752 FORWARD
          Length = 821

 Score =  173 bits (439), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 82/124 (66%), Positives = 96/124 (77%)

Query: 1   MDLFRSEAMQLVQLIIPIESAHLTVSYLGDLGLLQFKDLNAEKSPFQRTYAAQIKKCGEM 60
           MDL RSE MQLVQLI+P+ESAHLTVSYLGDLGL+QFKDLN+EKSPFQRTYAAQIK+CGEM
Sbjct: 14  MDLMRSETMQLVQLIVPMESAHLTVSYLGDLGLVQFKDLNSEKSPFQRTYAAQIKRCGEM 73

Query: 61  ARKLRFFKEQMEKAGFSPSSKSVTQTNIDMDGXXXXXXXXXXXXXXMNANNDKLQRTYNE 120
           ARK+RFF++QM KAG         + +ID+D               +NANNDKLQR+YNE
Sbjct: 74  ARKIRFFRDQMSKAGVPAKEMQGKENDIDLDDVEVKLGELEAELVEINANNDKLQRSYNE 133

Query: 121 LIEY 124
           L+EY
Sbjct: 134 LMEY 137


>AT2G28520.1 | Symbols: VHA-A1 | VHA-A1 (VACUOLAR PROTON ATPASE A
           1); ATPase | chr2:12210026-12215532 FORWARD
          Length = 817

 Score =  149 bits (375), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 69/124 (55%), Positives = 94/124 (75%)

Query: 1   MDLFRSEAMQLVQLIIPIESAHLTVSYLGDLGLLQFKDLNAEKSPFQRTYAAQIKKCGEM 60
           MDL RSE M LVQLIIP+ESAH +++YLG+LGLLQF+DLNA+KSPFQRT+A Q+K+CGEM
Sbjct: 11  MDLMRSEKMTLVQLIIPVESAHRSITYLGELGLLQFRDLNADKSPFQRTFANQVKRCGEM 70

Query: 61  ARKLRFFKEQMEKAGFSPSSKSVTQTNIDMDGXXXXXXXXXXXXXXMNANNDKLQRTYNE 120
           +RKLRFFK+Q++KAG   S +   + +I +                MN+N++KL++TYNE
Sbjct: 71  SRKLRFFKDQIDKAGLRCSPRLEIEPDIALGDLERQLADHEHEVLEMNSNSEKLRQTYNE 130

Query: 121 LIEY 124
           L+E+
Sbjct: 131 LLEF 134