Jatropha Genome Database

JcCA0316161.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0316161.10 + phase: 0 
         (246 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G20575.1 | Symbols:  | dolichyl-phosphate beta-D-mannosyltran...   415   e-116
AT2G39630.1 | Symbols:  | glycosyl transferase family 2 protein ...    65   3e-11
AT2G39630.2 | Symbols:  | glycosyl transferase family 2 protein ...    61   5e-10

>AT1G20575.1 | Symbols:  | dolichyl-phosphate
           beta-D-mannosyltransferase, putative /
           dolichol-phosphate mannosyltransferase, putative /
           mannose-P-dolichol synthase, putative |
           chr1:7126987-7128677 REVERSE
          Length = 246

 Score =  415 bits (1066), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 209/249 (83%), Positives = 221/249 (88%), Gaps = 17/249 (6%)

Query: 2   EKNKYSIIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQVYGE 61
           +K KYSIIIPTYNERLNIA+IVYLIFKHLRDVDFEIIVVDDGSPDGTQE+VKQLQQ+YGE
Sbjct: 11  KKYKYSIIIPTYNERLNIAIIVYLIFKHLRDVDFEIIVVDDGSPDGTQEIVKQLQQLYGE 70

Query: 62  DRILLRPRPKKLGLGTAYVHGLKHASGNFVVIMDADLSHHPKYLPSFIKKQLETGASIVT 121
           DRILLR R KKLGLGTAY+HGLKHA+G+FVVIMDADLSHHPKYLPSFIKKQLET ASIVT
Sbjct: 71  DRILLRARAKKLGLGTAYIHGLKHATGDFVVIMDADLSHHPKYLPSFIKKQLETNASIVT 130

Query: 122 GTRYVKGGGVHGWNLMRKLTSRGANVLAHTLLWPGVSDLTGSFRLYKKSVLEDIISSVVS 181
           GTRYVKGGGVHGWNLMRKLTSRGANVLA TLLWPGVSDLTGSFRLYKKS LED+ISS VS
Sbjct: 131 GTRYVKGGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSALEDVISSCVS 190

Query: 182 KGYVFQMEMIVRASRKGYHIEE-PLA---RLFFTGSKLLLLIEFLEVPKLGGSEIVEYLK 237
           KGYVFQMEMIVRA+RKGYHIEE P+    R+F T              KLGGSEIVEYLK
Sbjct: 191 KGYVFQMEMIVRATRKGYHIEEVPITFVDRVFGT-------------SKLGGSEIVEYLK 237

Query: 238 GLAYLLVTT 246
           GL YLL+TT
Sbjct: 238 GLVYLLLTT 246


>AT2G39630.1 | Symbols:  | glycosyl transferase family 2 protein |
           chr2:16522008-16524561 REVERSE
          Length = 336

 Score = 65.1 bits (157), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 51/219 (23%), Positives = 95/219 (43%), Gaps = 29/219 (13%)

Query: 7   SIIIPTYNERLNIALIVYLIFKHLRD-------VDFEIIVVDDGSPDGTQEVVKQLQQVY 59
           S+I+P YNE L +   +     +L+D         FE+++VDDGS DGT+ V     + Y
Sbjct: 69  SLIVPAYNEELRLPAALEETMDYLQDRASRDKSFSFEVVIVDDGSVDGTKRVAFDFIRKY 128

Query: 60  GEDRILLRPRPKKLGLGTAYVHGLKHASGNFVVIMDADLSHHPKYL-------------- 105
             D I + P  K  G G A   G+ H+ G  ++++DAD +     L              
Sbjct: 129 TIDNIRVIPLGKNQGKGEAIRKGMLHSRGQLLLMLDADGATKVTDLEKLENQINAVAREE 188

Query: 106 -----PSFIKKQLETGASIVT--GTR-YVKGGGVHGWNLMRKLTSRGANVLAHTLLWPGV 157
                P+      + G   V+  G+R +++   +      R    +G +++      PG+
Sbjct: 189 YSIRNPASKDMDFKIGDVQVSAFGSRAHLEEKALATRKWYRNFLMKGFHLVVLLAAGPGI 248

Query: 158 SDLTGSFRLYKKSVLEDIISSVVSKGYVFQMEMIVRASR 196
            D    F+++ ++    + ++V  K + F +E++    R
Sbjct: 249 RDTQCGFKMFTRAAARRLFTNVHLKRWCFDVELVYLCKR 287


>AT2G39630.2 | Symbols:  | glycosyl transferase family 2 protein |
           chr2:16522497-16524561 REVERSE
          Length = 236

 Score = 61.2 bits (147), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 52/98 (53%), Gaps = 7/98 (7%)

Query: 7   SIIIPTYNERLNIALIVYLIFKHLRD-------VDFEIIVVDDGSPDGTQEVVKQLQQVY 59
           S+I+P YNE L +   +     +L+D         FE+++VDDGS DGT+ V     + Y
Sbjct: 69  SLIVPAYNEELRLPAALEETMDYLQDRASRDKSFSFEVVIVDDGSVDGTKRVAFDFIRKY 128

Query: 60  GEDRILLRPRPKKLGLGTAYVHGLKHASGNFVVIMDAD 97
             D I + P  K  G G A   G+ H+ G  ++++DAD
Sbjct: 129 TIDNIRVIPLGKNQGKGEAIRKGMLHSRGQLLLMLDAD 166