Jatropha Genome Database

JcCA0316111.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0316111.10 - phase: 0 /pseudo/partial
         (1028 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G06210.1 | Symbols: ELF8, VIP6 | ELF8 (EARLY FLOWERING 8); bi...  1468   0.0  
AT3G04240.1 | Symbols: SEC | SEC (secret agent); transferase, tr...    67   6e-11
AT3G11540.1 | Symbols: SPY | SPY (SPINDLY); protein N-acetylgluc...    51   5e-06

>AT2G06210.1 | Symbols: ELF8, VIP6 | ELF8 (EARLY FLOWERING 8); binding
            | chr2:2429108-2436588 REVERSE
          Length = 1091

 Score = 1468 bits (3801), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 712/984 (72%), Positives = 815/984 (82%), Gaps = 9/984 (0%)

Query: 1    IIQREYFKQGKLEQFRQILEEGSSHEIDEYYADVRYERIAILNALGAYYSYLGKIETKQR 60
            II REYFKQGK+EQFRQILEEGSS +IDEYYADV+YERIAILNALGAYYSYLGK ETK R
Sbjct: 45   IIAREYFKQGKIEQFRQILEEGSSSDIDEYYADVKYERIAILNALGAYYSYLGKTETKNR 104

Query: 61   EKEEHFIQATKHYNKASRIDMHEPSTWVGKGQLLLAKGEIEQASNAFKIVLEGDRDNVAA 120
            EKEE FI AT++YNKASRIDMHEPSTWVGKGQLLLAKGEI+ A  AFKIVL+   DNV A
Sbjct: 105  EKEEQFISATRYYNKASRIDMHEPSTWVGKGQLLLAKGEIDNALQAFKIVLDTAPDNVPA 164

Query: 121  LLGQACVEYNRGHYIESLARYKRALQVYPNCPGAVRLGIGHCHYKLGHFKKAWQAFERVL 180
            LLGQA VE+NRG + ESL  YKRALQV+P CP AVRLGIG C YKLG   KA QAF+RVL
Sbjct: 165  LLGQASVEFNRGRFSESLQLYKRALQVFPGCPAAVRLGIGLCRYKLGQLDKARQAFDRVL 224

Query: 181  QLDPENVEALVALAILDLQTNEAAGIRRGMEKMQKAFEIYPYCAMALNYLANHFFFTGQH 240
            QLDP+NVEALVAL I+DLQ N++ G+R+GM++MQ+AFEIYPYCA ALNYLANHFFFTGQH
Sbjct: 225  QLDPDNVEALVALGIMDLQANDSIGMRKGMDRMQQAFEIYPYCASALNYLANHFFFTGQH 284

Query: 241  FLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYETASRYYWASVKEINK-PSEFVF 299
            FLVEQLTETALAVT HGPTKSHS+YNLARSYHSKGD+E A  YY A++KE N  P EFVF
Sbjct: 285  FLVEQLTETALAVTTHGPTKSHSFYNLARSYHSKGDFEKAGMYYMAAIKETNNNPHEFVF 344

Query: 300  PYYGLGQVQLKLGDIKNALSNFEKVLEVYPDNCETLKVLGHIYVQLGQTEKAQEFLRKAA 359
            PY+GLGQVQLKLG++K ++ NFEKVLEVYPDNCETLK LGH+Y QLGQ EKA E++RKA 
Sbjct: 345  PYFGLGQVQLKLGELKGSVFNFEKVLEVYPDNCETLKALGHLYTQLGQNEKALEYMRKAT 404

Query: 360  KIDPRDAQAFLDLGELLISSDTGAALDAFKTARTLLTKGGQKVPIEVLNNIGVIYFEREE 419
            K+DPRDAQAF+ LGELLISSDTGAALDAFK ARTL+ KGGQ+VPIEVLN+IG ++FEREE
Sbjct: 405  KLDPRDAQAFVGLGELLISSDTGAALDAFKMARTLMKKGGQEVPIEVLNDIGALHFEREE 464

Query: 420  LEPALDAFKDALGDGIWRAFLDGKAKTYKIDAAASVLQYKDMQLFHRLEEDGFDVELPWD 479
             E AL+ FK+ALGDGIW +FLD K    +     SVL YKD  +FHRL E G  V++PW+
Sbjct: 465  FESALENFKEALGDGIWISFLDEKENLEQ--TGVSVLGYKDTGIFHRLIESGHSVDVPWN 522

Query: 480  KVTALFNLARLLEQMHNIETASVLYRLIVFKYPDYVDAYLRLAAIAKARNNLQLSIELVN 539
            KVT LFNLARLLEQ+H  E A+ +YRLI+FKYP Y+DAYLRLAA AKA+NNL L+IELVN
Sbjct: 523  KVTTLFNLARLLEQIHKTEAATFMYRLILFKYPGYIDAYLRLAASAKAQNNLPLAIELVN 582

Query: 540  EALKVNDKCPNALSMLGDLELKNDDWVKAKETLRAASEATDGKDSYATLSLGNWNYFAAI 599
            EALKV+DK PNALS+LG+LELKNDDWVKAKET RAA++ATDGKDSYA LSLGNWNYFAA+
Sbjct: 583  EALKVDDKNPNALSLLGELELKNDDWVKAKETFRAANDATDGKDSYAILSLGNWNYFAAM 642

Query: 600  RNEKRNPKLEATHLEKAKELYTRVLVQHTANLYAANGAGVVLAEKGHFDVSKDLFTQVQE 659
            RNEKRNPKLEATHLEKAKELYT+VL QH +N+YAANG+G+VLAEKG FD++KD+FTQVQE
Sbjct: 643  RNEKRNPKLEATHLEKAKELYTKVLTQHNSNMYAANGSGIVLAEKGQFDIAKDVFTQVQE 702

Query: 660  AASGNIFVQMPDVWINLAHVYFAQGNFALAVKMYQNCLRKFYYNTDSQILLYLARTHYEA 719
            AASG++F+QMPDVW+NLAHVYFAQGNFAL VKMYQNCLRKF+YNTDSQILLYLARTHYEA
Sbjct: 703  AASGSVFLQMPDVWVNLAHVYFAQGNFALTVKMYQNCLRKFFYNTDSQILLYLARTHYEA 762

Query: 720  EQWQDCKKTLLRAIHLAPSNYILRFDAGVAMQKFSASTLQKTKRTVDEVRSTVDELENAV 779
            EQWQ+CKKTLLRAIHL PSNY  RFD G  MQK S+STLQK KRT DEVRSTV E ENAV
Sbjct: 763  EQWQECKKTLLRAIHLTPSNYTFRFDLGAVMQKSSSSTLQKKKRTADEVRSTVAEAENAV 822

Query: 780  RLFSQLSASSNLHFHGFDEKKINTHVEYCKHLLEAAKVHXXXXXXXXXXXXXXXXXXXXM 839
            R+F+QLSA+S+LH HGFD KKI THV+YC HLLEAAKVH                     
Sbjct: 823  RVFTQLSAASDLHVHGFDSKKIQTHVQYCSHLLEAAKVHREAAEQEELQNRQRLEVARQA 882

Query: 840  ALAEDARRKAEEQRKFQLERRKQENELKRVRQQEEHFERVKEQWKSTS--ASKRRDRSEM 897
            ALAE+ARRKAEEQRK+QLE+RKQE EL+R++Q+EE F+R+KEQWKS++  ++KR+DR E 
Sbjct: 883  ALAEEARRKAEEQRKYQLEKRKQEEELRRLKQEEEKFQRIKEQWKSSTPGSNKRKDRVED 942

Query: 898  DD-EDGGHXXXXXXXXXXXXXXXXXXXXHYEMEEGEADIMDDHEELEDEDANVNYREQRD 956
            DD E                        HYE +E EA  MDDH E+EDEDAN NY  + D
Sbjct: 943  DDGESKPSERRRKKGGKRRKKDKSSRARHYEDDEEEAATMDDHNEVEDEDANTNYNRE-D 1001

Query: 957  QMNDQ--DENAEENAHERLAAAGL 978
            +M  Q  +E  +++AH+ LAAAGL
Sbjct: 1002 EMTTQEAEEPVDDDAHDLLAAAGL 1025


>AT3G04240.1 | Symbols: SEC | SEC (secret agent); transferase,
           transferring glycosyl groups | chr3:1114187-1120722
           REVERSE
          Length = 977

 Score = 67.0 bits (162), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 88/349 (25%), Positives = 144/349 (41%), Gaps = 34/349 (9%)

Query: 94  LLAKGEIEQASNAFKIVLEGDRDNVAALLGQACVEYNRGHYIESLARYKRALQVYPN--- 150
           L   G+ +QA     +V + +      LL    + Y    Y   +AR + AL++ P    
Sbjct: 63  LYKGGDFKQALEHSNMVYQRNPLRTDNLLLIGAIYYQLQEYDMCIARNEEALRIQPQFAE 122

Query: 151 CPGAVRLGIGHCHYKLGHFKKAWQAFERVLQLDPENVEALVALAILDLQTNEAAGIRRG- 209
           C G     + +   + G   +A + +   ++L P   +A   LA        +A +R+G 
Sbjct: 123 CYG----NMANAWKEKGDTDRAIRYYLIAIELRPNFADAWSNLA--------SAYMRKGR 170

Query: 210 ----MEKMQKAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYY 265
                +  Q+A  + P    A + L N     G   L+ +     L      PT + ++ 
Sbjct: 171 LSEATQCCQQALSLNPLLVDAHSNLGNLMKAQG---LIHEAYSCYLEAVRIQPTFAIAWS 227

Query: 266 NLARSYHSKGDYETASRYYWASVKEINKPSEFVFP--YYGLGQVQLKLGDIKNALSNFEK 323
           NLA  +   GD   A +YY  +VK   KP+   FP  Y  LG V   LG    A+  ++ 
Sbjct: 228 NLAGLFMESGDLNRALQYYKEAVKL--KPA---FPDAYLNLGNVYKALGRPTEAIMCYQH 282

Query: 324 VLEVYPDNCETLKVLGHIYVQLGQTEKAQEFLRKAAKIDPRDAQAFLDLGELLISSDTGA 383
            L++ P++      +  IY + GQ + A    ++A   DPR  +A+ +LG  L   D G 
Sbjct: 283 ALQMRPNSAMAFGNIASIYYEQGQLDLAIRHYKQALSRDPRFLEAYNNLGNAL--KDIGR 340

Query: 384 ALDAFKTARTLLTKGGQKVPIEVLNNIGVIYFEREELEPALDAFKDALG 432
             +A +     L    Q    + + N+G IY E   + PA   FK  L 
Sbjct: 341 VDEAVRCYNQCLAL--QPNHPQAMANLGNIYMEWNMMGPASSLFKATLA 387


>AT3G11540.1 | Symbols: SPY | SPY (SPINDLY); protein
           N-acetylglucosaminyltransferase/ protein binding /
           transferase, transferring glycosyl groups |
           chr3:3632842-3637547 FORWARD
          Length = 914

 Score = 50.8 bits (120), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 97/411 (23%), Positives = 167/411 (40%), Gaps = 83/411 (20%)

Query: 83  EPSTWVGKGQLLLAKGEIEQASNAF-------KIVLEGDRDNVAALLGQA-CVEY-NRGH 133
            PS  V +G   L+   I +A N F       + +LE D  NV A +G+  C++  N+G+
Sbjct: 35  SPSRKVTQGNDTLSYANILRARNKFADALALYEAMLEKDSKNVEAHIGKGICLQTQNKGN 94

Query: 134 YIESLARYKRALQVYPNCPGAVRLGIGHC---HYKLGHFKKAWQAFERVLQLDPENVEAL 190
              +   +  A+++ P+   A    + HC   H + G   +A +++++ L  D     A 
Sbjct: 95  L--AFDCFSEAIRLDPHNACA----LTHCGILHKEEGRLVEAAESYQKALMADASYKPAA 148

Query: 191 VALAIL--DLQTNE--AAGIRRGMEKMQKAFEIYPYCAMALNYLANHFFFTGQHFLVEQL 246
             LAI+  DL T+   A   + G++K  +A +I P+ A A       ++  G  +     
Sbjct: 149 ECLAIVLTDLGTSLKLAGNTQEGIQKYYEALKIDPHYAPA-------YYNLGVVYSEMMQ 201

Query: 247 TETALAVTNHG----PTKSHSYYNLARSYHSKGDYETASRYYWASVK-----EINKPSEF 297
            + AL+         P  + +Y N+   Y ++GD E A   Y   +      EI K +  
Sbjct: 202 YDNALSCYEKAALERPMYAEAYCNMGVIYKNRGDLEMAITCYERCLAVSPNFEIAK-NNM 260

Query: 298 VFPYYGLGQVQLKL-GDIKNALSNFEKVL------------------------------- 325
                 LG  ++KL GD+   ++ ++K L                               
Sbjct: 261 AIALTDLG-TKVKLEGDVTQGVAYYKKALYYNWHYADAMYNLGVAYGEMLKFDMAIVFYE 319

Query: 326 ---EVYPDNCETLKVLGHIYVQLGQTEKAQEFLRKAAKIDPRDAQAFLDLGELLISSDTG 382
                 P   E    LG +Y      +KA E  + A  I P  AQ+  +LG   +     
Sbjct: 320 LAFHFNPHCAEACNNLGVLYKDRDNLDKAVECYQMALSIKPNFAQSLNNLG---VVYTVQ 376

Query: 383 AALDAFKTARTLLTKGGQKVPI--EVLNNIGVIYFEREELEPALDAFKDAL 431
             +DA   A +++ K     P   E  NN+GV+Y +   +  A+DA+++ L
Sbjct: 377 GKMDA---AASMIEKAILANPTYAEAFNNLGVLYRDAGNITMAIDAYEECL 424