Jatropha Genome Database
- JcCA0315891.20
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0315891.20 + phase: 0
(699 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G24470.1 | Symbols: APRR5, PRR5 | APRR5 (ARABIDOPSIS PSEUDO-R... 272 5e-73
AT2G46790.1 | Symbols: APRR9, PRR9, TL1 | APRR9 (ARABIDOPSIS PSE... 248 9e-66
AT5G60100.1 | Symbols: APRR3, PRR3 | APRR3 (ARABIDOPSIS PSEUDO-R... 198 1e-50
AT5G02810.1 | Symbols: PRR7, APRR7 | PRR7 (PSEUDO-RESPONSE REGUL... 172 7e-43
AT5G61380.1 | Symbols: TOC1, APRR1, PRR1 | TOC1 (TIMING OF CAB E... 119 6e-27
AT3G16857.2 | Symbols: ARR1 | ARR1 (ARABIDOPSIS RESPONSE REGULAT... 107 2e-23
AT3G16857.1 | Symbols: ARR1 | ARR1 (ARABIDOPSIS RESPONSE REGULAT... 107 2e-23
AT4G16110.1 | Symbols: ARR2 | ARR2 (ARABIDOPSIS RESPONSE REGULAT... 104 2e-22
AT2G25180.1 | Symbols: ARR12 | ARR12 (ARABIDOPSIS RESPONSE REGUL... 102 1e-21
AT4G31920.1 | Symbols: ARR10 | ARR10 (ARABIDOPSIS RESPONSE REGUL... 101 2e-21
AT2G46790.2 | Symbols: APRR9, PRR9, TL1 | APRR9 (ARABIDOPSIS PSE... 93 6e-19
AT2G46670.1 | Symbols: | pseudo-response regulator, putative / ... 92 1e-18
AT2G01760.1 | Symbols: ARR14 | ARR14 (ARABIDOPSIS RESPONSE REGUL... 91 2e-18
AT1G67710.1 | Symbols: ARR11 | ARR11 (RESPONSE REGULATOR 11); tr... 90 4e-18
AT5G58080.1 | Symbols: ARR18 | ARR18 (ARABIDOPSIS RESPONSE REGUL... 87 3e-17
AT3G62670.1 | Symbols: ARR20, MEE41 | ARR20 (ARABIDOPSIS RESPONS... 77 3e-14
AT1G10470.1 | Symbols: ARR4, MEE7, ATRR1, IBC7 | ARR4 (RESPONSE ... 73 5e-13
AT1G59940.1 | Symbols: ARR3 | ARR3 (RESPONSE REGULATOR 3); trans... 69 9e-12
AT1G19050.1 | Symbols: ARR7 | ARR7 (RESPONSE REGULATOR 7); trans... 69 1e-11
AT3G57040.1 | Symbols: ARR9, ATRR4 | ARR9 (RESPONSE REGULATOR 9)... 69 1e-11
AT1G74890.1 | Symbols: ARR15 | ARR15 (RESPONSE REGULATOR 15); tr... 68 2e-11
AT4G00760.1 | Symbols: APRR8, PRR8 | APRR8 (PSEUDO-RESPONSE REGU... 68 3e-11
AT1G49190.1 | Symbols: ARR19 | ARR19 (ARABIDOPSIS RESPONSE REGUL... 67 3e-11
AT3G48100.1 | Symbols: ARR5, ATRR2, IBC6 | ARR5 (ARABIDOPSIS RES... 67 3e-11
AT5G62920.1 | Symbols: ARR6 | ARR6 (RESPONSE REGULATOR 6); trans... 66 7e-11
AT2G41310.1 | Symbols: ATRR3, ARR8 | ATRR3 (RESPONSE REGULATOR 3... 65 1e-10
AT5G49240.1 | Symbols: APRR4, PRR4 | APRR4 (PSEUDO-RESPONSE REGU... 65 1e-10
AT5G24930.1 | Symbols: ATCOL4, COL4 | zinc finger (B-box type) f... 63 8e-10
AT3G56380.1 | Symbols: ARR17, RR17 | ARR17 (ARABIDOPSIS RESPONSE... 59 9e-09
AT4G18020.5 | Symbols: | APRR2; transcription factor/ two-compo... 59 1e-08
AT4G18020.4 | Symbols: APRR2, PRR2 | APRR2; transcription factor... 59 1e-08
AT4G18020.3 | Symbols: APRR2, PRR2 | APRR2; transcription factor... 59 2e-08
AT4G18020.2 | Symbols: APRR2, PRR2 | APRR2; transcription factor... 59 2e-08
AT4G18020.1 | Symbols: APRR2, PRR2 | APRR2; transcription factor... 59 2e-08
AT5G57180.2 | Symbols: CIA2 | CIA2 (CHLOROPLAST IMPORT APPARATUS... 58 2e-08
AT1G68210.1 | Symbols: APRR6, PRR6 | APRR6 (PSEUDO-RESPONSE REGU... 57 4e-08
AT4G25990.1 | Symbols: CIL | CIL | chr4:13191937-13193543 REVERSE 57 5e-08
AT5G57660.1 | Symbols: ATCOL5, COL5 | zinc finger (B-box type) f... 56 1e-07
AT1G49130.1 | Symbols: | zinc finger (B-box type) family protei... 55 1e-07
AT1G49130.2 | Symbols: | zinc finger (B-box type) family protei... 55 1e-07
AT2G24790.1 | Symbols: COL3, ATCOL3 | COL3 (CONSTANS-LIKE 3); pr... 55 2e-07
AT5G14370.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:... 54 3e-07
AT1G73870.1 | Symbols: | zinc finger (B-box type) family protei... 54 4e-07
AT2G40670.1 | Symbols: ARR16, RR16 | ARR16 (ARABIDOPSIS RESPONSE... 53 6e-07
AT1G25440.1 | Symbols: | zinc finger (B-box type) family protei... 53 6e-07
AT5G07210.1 | Symbols: ARR21 | ARR21 (ARABIDOPSIS RESPONSE REGUL... 53 6e-07
AT1G68520.1 | Symbols: | zinc finger (B-box type) family protei... 52 1e-06
AT1G07050.1 | Symbols: | CONSTANS-like protein-related | chr1:2... 52 2e-06
AT1G51600.2 | Symbols: ZML2, TIFY2A | TIFY2A; sequence-specific ... 51 3e-06
AT1G51600.1 | Symbols: ZML2, TIFY2A | TIFY2A; sequence-specific ... 51 3e-06
AT5G15850.1 | Symbols: COL1, ATCOL1 | COL1 (constans-like 1); tr... 51 3e-06
AT3G02380.1 | Symbols: COL2 | COL2 (constans-like 2); transcript... 50 5e-06
AT1G63820.1 | Symbols: | INVOLVED IN: biological_process unknow... 50 7e-06
>AT5G24470.1 | Symbols: APRR5, PRR5 | APRR5 (ARABIDOPSIS
PSEUDO-RESPONSE REGULATOR 5); transcription regulator/
two-component response regulator | chr5:8356204-8358873
REVERSE
Length = 667
Score = 272 bits (696), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 132/197 (67%), Positives = 150/197 (76%), Gaps = 10/197 (5%)
Query: 40 VVRWEKFLPRMVLRVLLVEADDSTRQIIAALLRKCSYRVAAVPDGLMAWETLKGRPHSID 99
+V+WE+FLP++ LRVLLVEADDSTRQIIAALLRKCSYRVAAVPDGL AWE LKG+P S+D
Sbjct: 147 LVKWERFLPKIALRVLLVEADDSTRQIIAALLRKCSYRVAAVPDGLKAWEMLKGKPESVD 206
Query: 100 LILTEVELPSISGYALLTLVMEHDICKNIPVIMMSSHDSISMVLKCMLKGAADFLIKPVR 159
LILTEV+LPSISGYALLTL+MEHDICKNIPVIMMS+ DS++ V KCMLKGAAD+L+KP+R
Sbjct: 207 LILTEVDLPSISGYALLTLIMEHDICKNIPVIMMSTQDSVNTVYKCMLKGAADYLVKPLR 266
Query: 160 RNELRNLWRHVWRRQ-NLTAGHIPQSSPDAQHKVEAASENNSASDHSSDCATSSHKRKEC 218
RNELRNLW+HVWRRQ +L P + Q K E AS NNS
Sbjct: 267 RNELRNLWQHVWRRQTSLAPDSFPWNESVGQQKAEGASANNSNGKRDDHVV--------- 317
Query: 219 SEKGNDNQSSCTTPYSE 235
S G D QSSCT P E
Sbjct: 318 SGNGGDAQSSCTRPEME 334
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/59 (77%), Positives = 53/59 (89%), Gaps = 1/59 (1%)
Query: 632 SLKDGGIPFRSSQREAALTKFRLKRKDRCYEQKVRYQSRKRLAEQRPRVKGQFVRQVQN 690
SL G I +S QREAALTKFR+KRKDRCYE+KVRY+SRK+LAEQRPR+KGQFVRQVQ+
Sbjct: 606 SLSVGKIQ-QSLQREAALTKFRMKRKDRCYEKKVRYESRKKLAEQRPRIKGQFVRQVQS 663
>AT2G46790.1 | Symbols: APRR9, PRR9, TL1 | APRR9 (ARABIDOPSIS
PSEUDO-RESPONSE REGULATOR 9); protein binding /
transcription regulator/ two-component response
regulator | chr2:19232874-19234901 FORWARD
Length = 468
Score = 248 bits (633), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 119/178 (66%), Positives = 139/178 (78%), Gaps = 4/178 (2%)
Query: 33 NEDASSEVVRWEKFLPRMVLRVLLVEADDSTRQIIAALLRKCSYRVAAVPDGLMAWETLK 92
N SSEVV+WEK+LP+ VLRVLLVE+D STRQII ALLRKC Y+V AV DGL AWE LK
Sbjct: 18 NRVKSSEVVQWEKYLPKTVLRVLLVESDYSTRQIITALLRKCCYKVVAVSDGLAAWEVLK 77
Query: 93 GRPHSIDLILTEVELPSISGYALLTLVMEHDICKNIPVIMMSSHDSISMVLKCMLKGAAD 152
+ H+IDLILTE++LPSISG+ALL LVMEH+ CKNIPVIMMSS DSI MVLKCML+GAAD
Sbjct: 78 EKSHNIDLILTELDLPSISGFALLALVMEHEACKNIPVIMMSSQDSIKMVLKCMLRGAAD 137
Query: 153 FLIKPVRRNELRNLWRHVWRRQNLT---AGHIPQSSPDAQHKVEAASENNSASDHSSD 207
+LIKP+R+NEL+NLW+HVWRR L H QS P +QH +E E S + SD
Sbjct: 138 YLIKPMRKNELKNLWQHVWRRLTLRDDPTAH-AQSLPASQHNLEDTDETCEDSRYHSD 194
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 45/76 (59%), Positives = 55/76 (72%)
Query: 617 NTTLAAAPEEVVKPESLKDGGIPFRSSQREAALTKFRLKRKDRCYEQKVRYQSRKRLAEQ 676
N +A KP+ + + SQREAAL KFRLKRKDRC+++KVRYQSRK+LAEQ
Sbjct: 389 NEGIAGQSSSTEKPKEEESAKQRWSRSQREAALMKFRLKRKDRCFDKKVRYQSRKKLAEQ 448
Query: 677 RPRVKGQFVRQVQNNA 692
RPRVKGQFVR V ++A
Sbjct: 449 RPRVKGQFVRTVNSDA 464
>AT5G60100.1 | Symbols: APRR3, PRR3 | APRR3 (ARABIDOPSIS
PSEUDO-RESPONSE REGULATOR 3); transcription regulator/
two-component response regulator |
chr5:24198215-24200502 REVERSE
Length = 495
Score = 198 bits (503), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 137/385 (35%), Positives = 199/385 (51%), Gaps = 52/385 (13%)
Query: 40 VVRWEKFLPRMVLRVLLVEADDSTRQIIAALLRKCSYRVAAVPDGLMAWETLKGRPHSID 99
VV+WE++LP L+VLLVE DDSTR I+ ALL+ CSY V AVPD L AW L+ ID
Sbjct: 52 VVKWERYLPVRSLKVLLVENDDSTRHIVTALLKNCSYEVTAVPDVLEAWRILEDEKSCID 111
Query: 100 LILTEVELPSISGYALLTLVMEHDICKNIPVIMMSSHDSISMVLKCMLKGAADFLIKPVR 159
L+LTEV++P SG LL+ +M H KNIPVIMMSSHDS+ +V KC+ GA DFL+KP+R
Sbjct: 112 LVLTEVDMPVHSGTGLLSKIMSHKTLKNIPVIMMSSHDSMVLVFKCLSNGAVDFLVKPIR 171
Query: 160 RNELRNLWRHVWRRQNLTAGHIPQSSPDAQHKVEAASENNSASDHSSDCATSSHKRKECS 219
+NEL+NLW+HVWRR + ++G +S + V+ S S +D S + H+ + S
Sbjct: 172 KNELKNLWQHVWRRCHSSSGSGSESGIHDKKSVKPESTQGSENDAS---ISDEHRNESGS 228
Query: 220 EKGNDNQSSCTTPYSELRVFTCKYLQGISQPKLRSASNL--------SNMEEECAVLNKG 271
G NQ + S + + + S K S SN E CA +N+
Sbjct: 229 SGGLSNQDGGSDNGSGTQ---SSWTKRASDTKSTSPSNQFPDAPNKKGTYENGCAHVNR- 284
Query: 272 PVIPENKTEATDWSTRLGPMSASCNGAYNQTTLKLGEHASSAMEVIQAESLRPENERGNS 331
EA D ++G S QT + + + A ++ +N + +
Sbjct: 285 ------LKEAEDQKEQIGTGS--------QTGMSMSKKAEEPGDL-------EKNAKYSV 323
Query: 332 NTTQGHNDDLVESSSGAIDLIGTFDNGPKHTYVDTNIKDGTNKFEFTPLELSLRRFFPNS 391
+ +NDD + SSG ++ V++ +N+ + LE +L++
Sbjct: 324 QALERNNDDTLNRSSG-------------NSQVESKAP-SSNREDLQSLEQTLKK--TRE 367
Query: 392 SKNQGIEDRHALNHSNASAFSWYNN 416
++ + DR L HSN SAFS YNN
Sbjct: 368 DRDYKVGDRSVLRHSNLSAFSKYNN 392
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 38/58 (65%), Positives = 48/58 (82%)
Query: 641 RSSQREAALTKFRLKRKDRCYEQKVRYQSRKRLAEQRPRVKGQFVRQVQNNAPAAGDN 698
R +QREAAL KFRLKRK+RC+E+KVRY SRK+LAEQRP VKGQF+R+ ++ + DN
Sbjct: 438 RWAQREAALMKFRLKRKERCFEKKVRYHSRKKLAEQRPHVKGQFIRKRDDHKSGSEDN 495
>AT5G02810.1 | Symbols: PRR7, APRR7 | PRR7 (PSEUDO-RESPONSE
REGULATOR 7); transcription regulator/ two-component
response regulator | chr5:638283-641461 REVERSE
Length = 727
Score = 172 bits (436), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 74/137 (54%), Positives = 99/137 (72%)
Query: 37 SSEVVRWEKFLPRMVLRVLLVEADDSTRQIIAALLRKCSYRVAAVPDGLMAWETLKGRPH 96
++ V WE+FL +RVLLVE DD TR I+ ALLR CSY V +G+ AW+ L+ +
Sbjct: 63 TAATVCWERFLHVRTIRVLLVENDDCTRYIVTALLRNCSYEVVEASNGIQAWKVLEDLNN 122
Query: 97 SIDLILTEVELPSISGYALLTLVMEHDICKNIPVIMMSSHDSISMVLKCMLKGAADFLIK 156
ID++LTEV +P +SG LL ++ H +NIPVIMMSSHDS+ +V KC+ KGA DFL+K
Sbjct: 123 HIDIVLTEVIMPYLSGIGLLCKILNHKSRRNIPVIMMSSHDSMGLVFKCLSKGAVDFLVK 182
Query: 157 PVRRNELRNLWRHVWRR 173
P+R+NEL+ LW+HVWRR
Sbjct: 183 PIRKNELKILWQHVWRR 199
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 41/57 (71%), Positives = 48/57 (84%), Gaps = 3/57 (5%)
Query: 643 SQREAALTKFRLKRKDRCYEQKVRYQSRKRLAEQRPRVKGQFVRQVQNNAPAAGDNN 699
SQREAALTKFR KRK+RC+ +KVRYQSRK+LAEQRPRV+GQFVR+ A A DN+
Sbjct: 667 SQREAALTKFRQKRKERCFRKKVRYQSRKKLAEQRPRVRGQFVRKT---AAATDDND 720
>AT5G61380.1 | Symbols: TOC1, APRR1, PRR1 | TOC1 (TIMING OF CAB
EXPRESSION 1); transcription regulator/ two-component
response regulator | chr5:24675540-24678176 FORWARD
Length = 618
Score = 119 bits (299), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 55/142 (38%), Positives = 83/142 (58%)
Query: 35 DASSEVVRWEKFLPRMVLRVLLVEADDSTRQIIAALLRKCSYRVAAVPDGLMAWETLKGR 94
D + E + F+ R +R+LL + D ++ + LL +CSY+V AV + L
Sbjct: 2 DLNGECKGGDGFIDRSRVRILLCDNDSTSLGEVFTLLSECSYQVTAVKSARQVIDALNAE 61
Query: 95 PHSIDLILTEVELPSISGYALLTLVMEHDICKNIPVIMMSSHDSISMVLKCMLKGAADFL 154
ID+IL E++LP G +L + + IPVIMMS D + +V+KC+ GAAD+L
Sbjct: 62 GPDIDIILAEIDLPMAKGMKMLRYITRDKDLRRIPVIMMSRQDEVPVVVKCLKLGAADYL 121
Query: 155 IKPVRRNELRNLWRHVWRRQNL 176
+KP+R NEL NLW H+WRR+ +
Sbjct: 122 VKPLRTNELLNLWTHMWRRRRM 143
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 30/45 (66%), Positives = 39/45 (86%)
Query: 644 QREAALTKFRLKRKDRCYEQKVRYQSRKRLAEQRPRVKGQFVRQV 688
+RE AL KFR KR RC+++K+RY +RKRLAE+RPRVKGQFVR++
Sbjct: 532 RREEALLKFRRKRNQRCFDKKIRYVNRKRLAERRPRVKGQFVRKM 576
>AT3G16857.2 | Symbols: ARR1 | ARR1 (ARABIDOPSIS RESPONSE REGULATOR
1); transcription factor/ two-component response
regulator | chr3:5756113-5759139 FORWARD
Length = 690
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 107/196 (54%), Gaps = 28/196 (14%)
Query: 52 LRVLLVEADDSTRQIIAALLRKCSYRVAAVPDGLMAWETLKGRPHSIDLILTEVELPSIS 111
LRVL+V+ D + I+ +LR C Y V MA L+ H D+++++V +P +
Sbjct: 37 LRVLVVDDDPTCLMILERMLRTCLYEVTKCNRAEMALSLLRKNKHGFDIVISDVHMPDMD 96
Query: 112 GYALLTLV-MEHDICKNIPVIMMSSHDSISMVLKCMLKGAADFLIKPVRRNELRNLWRHV 170
G+ LL V +E D+ PVIMMS+ DS S+VLK + GA D+LIKPVR L+N+W+HV
Sbjct: 97 GFKLLEHVGLEMDL----PVIMMSADDSKSVVLKGVTHGAVDYLIKPVRMEALKNIWQHV 152
Query: 171 WRRQNLTAGHIPQSS---------PDAQHKV-----------EAASENNSASDHSSDCAT 210
R++ + +P+ S QH+ +A +N+S+ + ++ +
Sbjct: 153 VRKRR-SEWSVPEHSGSIEETGERQQQQHRGGGGGAAVSGGEDAVDDNSSSVNEGNNWRS 211
Query: 211 SSHKRK--ECSEKGND 224
SS KRK E E+G+D
Sbjct: 212 SSRKRKDEEGEEQGDD 227
>AT3G16857.1 | Symbols: ARR1 | ARR1 (ARABIDOPSIS RESPONSE REGULATOR
1); transcription factor/ two-component response
regulator | chr3:5756113-5758853 FORWARD
Length = 669
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 107/196 (54%), Gaps = 28/196 (14%)
Query: 52 LRVLLVEADDSTRQIIAALLRKCSYRVAAVPDGLMAWETLKGRPHSIDLILTEVELPSIS 111
LRVL+V+ D + I+ +LR C Y V MA L+ H D+++++V +P +
Sbjct: 37 LRVLVVDDDPTCLMILERMLRTCLYEVTKCNRAEMALSLLRKNKHGFDIVISDVHMPDMD 96
Query: 112 GYALLTLV-MEHDICKNIPVIMMSSHDSISMVLKCMLKGAADFLIKPVRRNELRNLWRHV 170
G+ LL V +E D+ PVIMMS+ DS S+VLK + GA D+LIKPVR L+N+W+HV
Sbjct: 97 GFKLLEHVGLEMDL----PVIMMSADDSKSVVLKGVTHGAVDYLIKPVRMEALKNIWQHV 152
Query: 171 WRRQNLTAGHIPQSS---------PDAQHKV-----------EAASENNSASDHSSDCAT 210
R++ + +P+ S QH+ +A +N+S+ + ++ +
Sbjct: 153 VRKRR-SEWSVPEHSGSIEETGERQQQQHRGGGGGAAVSGGEDAVDDNSSSVNEGNNWRS 211
Query: 211 SSHKRK--ECSEKGND 224
SS KRK E E+G+D
Sbjct: 212 SSRKRKDEEGEEQGDD 227
>AT4G16110.1 | Symbols: ARR2 | ARR2 (ARABIDOPSIS RESPONSE REGULATOR
2); transcription factor/ two-component response
regulator | chr4:9112979-9115785 FORWARD
Length = 664
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/191 (33%), Positives = 103/191 (53%), Gaps = 17/191 (8%)
Query: 52 LRVLLVEADDSTRQIIAALLRKCSYRVAAVPDGLMAWETLKGRPHSIDLILTEVELPSIS 111
LRVL+V+ D + I+ +L C YRV A L+ + D+++++V +P +
Sbjct: 28 LRVLVVDDDPTCLMILERMLMTCLYRVTKCNRAESALSLLRKNKNGFDIVISDVHMPDMD 87
Query: 112 GYALLTLV-MEHDICKNIPVIMMSSHDSISMVLKCMLKGAADFLIKPVRRNELRNLWRHV 170
G+ LL V +E D+ PVIMMS+ DS S+VLK + GA D+LIKPVR L+N+W+HV
Sbjct: 88 GFKLLEHVGLEMDL----PVIMMSADDSKSVVLKGVTHGAVDYLIKPVRIEALKNIWQHV 143
Query: 171 -------WRRQNLTAGHIPQSSPD----AQHKVEAASENNSASDHSSDCATSSHKRKECS 219
W + G I + D QH+ E A N+S+ + + ++ K +E
Sbjct: 144 VRKKRNEWNVSEHSGGSIEDTGGDRDRQQQHR-EDADNNSSSVNEGNGRSSRKRKEEEVD 202
Query: 220 EKGNDNQSSCT 230
++G+D + S +
Sbjct: 203 DQGDDKEDSSS 213
>AT2G25180.1 | Symbols: ARR12 | ARR12 (ARABIDOPSIS RESPONSE
REGULATOR 12); transcription factor/ two-component
response regulator | chr2:10724490-10726961 REVERSE
Length = 596
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 76/122 (62%), Gaps = 5/122 (4%)
Query: 52 LRVLLVEADDSTRQIIAALLRKCSYRVAAVPDGLMAWETLKGRPHSIDLILTEVELPSIS 111
+RVL V+ D + +I+ +LLR C Y V A E L+ + DL++++V++P +
Sbjct: 17 MRVLAVDDDQTCLKILESLLRHCQYHVTTTNQAQKALELLRENKNKFDLVISDVDMPDMD 76
Query: 112 GYALLTLV-MEHDICKNIPVIMMSSHDSISMVLKCMLKGAADFLIKPVRRNELRNLWRHV 170
G+ LL LV +E D+ PVIM+S+H V+K + GA D+L+KPVR EL+N+W+HV
Sbjct: 77 GFKLLELVGLEMDL----PVIMLSAHSDPKYVMKGVTHGACDYLLKPVRIEELKNIWQHV 132
Query: 171 WR 172
R
Sbjct: 133 VR 134
>AT4G31920.1 | Symbols: ARR10 | ARR10 (ARABIDOPSIS RESPONSE
REGULATOR 10); transcription factor/ two-component
response regulator | chr4:15444290-15446766 REVERSE
Length = 552
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 97/181 (53%), Gaps = 29/181 (16%)
Query: 52 LRVLLVEADDSTRQIIAALLRKCSYRVAAVPDGLMAWETLKGRPHSIDLILTEVELPSIS 111
+RVL V+ D + +I+ LL++C Y V A E L+ + DL++++V++P +
Sbjct: 17 MRVLAVDDDQTCLRILQTLLQRCQYHVTTTNQAQTALELLRENKNKFDLVISDVDMPDMD 76
Query: 112 GYALLTLV-MEHDICKNIPVIMMSSHDSISMVLKCMLKGAADFLIKPVRRNELRNLWRHV 170
G+ LL LV +E D+ PVIM+S+H V+K + GA D+L+KPVR EL+N+W+HV
Sbjct: 77 GFKLLELVGLEMDL----PVIMLSAHSDPKYVMKGVKHGACDYLLKPVRIEELKNIWQHV 132
Query: 171 WRRQNLTAGHIPQSSPDAQHKVEAASENNSASDHSSDCATSSHKRKE------CSEKGND 224
R K + ++ S+ S +C ++ KRKE E+GND
Sbjct: 133 VR------------------KSKLKKNKSNVSNGSGNCDKANRKRKEQYEEEEEEERGND 174
Query: 225 N 225
N
Sbjct: 175 N 175
>AT2G46790.2 | Symbols: APRR9, PRR9, TL1 | APRR9 (ARABIDOPSIS
PSEUDO-RESPONSE REGULATOR 9); protein binding /
transcription regulator/ two-component response
regulator | chr2:19233422-19234901 FORWARD
Length = 351
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 45/76 (59%), Positives = 55/76 (72%)
Query: 617 NTTLAAAPEEVVKPESLKDGGIPFRSSQREAALTKFRLKRKDRCYEQKVRYQSRKRLAEQ 676
N +A KP+ + + SQREAAL KFRLKRKDRC+++KVRYQSRK+LAEQ
Sbjct: 272 NEGIAGQSSSTEKPKEEESAKQRWSRSQREAALMKFRLKRKDRCFDKKVRYQSRKKLAEQ 331
Query: 677 RPRVKGQFVRQVQNNA 692
RPRVKGQFVR V ++A
Sbjct: 332 RPRVKGQFVRTVNSDA 347
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/78 (57%), Positives = 54/78 (69%), Gaps = 4/78 (5%)
Query: 133 MSSHDSISMVLKCMLKGAADFLIKPVRRNELRNLWRHVWRRQNLT---AGHIPQSSPDAQ 189
MSS DSI MVLKCML+GAAD+LIKP+R+NEL+NLW+HVWRR L H QS P +Q
Sbjct: 1 MSSQDSIKMVLKCMLRGAADYLIKPMRKNELKNLWQHVWRRLTLRDDPTAH-AQSLPASQ 59
Query: 190 HKVEAASENNSASDHSSD 207
H +E E S + SD
Sbjct: 60 HNLEDTDETCEDSRYHSD 77
>AT2G46670.1 | Symbols: | pseudo-response regulator, putative /
timing of CAB expression 1-like protein, putative |
chr2:19164589-19165233 REVERSE
Length = 183
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/76 (59%), Positives = 55/76 (72%)
Query: 617 NTTLAAAPEEVVKPESLKDGGIPFRSSQREAALTKFRLKRKDRCYEQKVRYQSRKRLAEQ 676
N +A KP+ + + SQREAAL KFRLKRKDRC+++KVRYQSRK+LAEQ
Sbjct: 104 NEGIAGQSSSTEKPKEEESAKQRWSRSQREAALMKFRLKRKDRCFDKKVRYQSRKKLAEQ 163
Query: 677 RPRVKGQFVRQVQNNA 692
RPRVKGQFVR V ++A
Sbjct: 164 RPRVKGQFVRTVNSDA 179
>AT2G01760.1 | Symbols: ARR14 | ARR14 (ARABIDOPSIS RESPONSE
REGULATOR 14); transcription factor/ two-component
response regulator | chr2:333041-334514 FORWARD
Length = 382
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 75/125 (60%), Gaps = 6/125 (4%)
Query: 52 LRVLLVEADDSTRQIIAALLRKCSYRVAAVPDGLMAWETLKGRPHSIDLILTEVELPSIS 111
LR+L+V+ D S I+ +L + Y+V +A L+ R S DL+L++V +P ++
Sbjct: 11 LRILVVDDDTSCLFILEKMLLRLMYQVTICSQADVALTILRERKDSFDLVLSDVHMPGMN 70
Query: 112 GYALLTLV--MEHDICKNIPVIMMSSHDSISMVLKCMLKGAADFLIKPVRRNELRNLWRH 169
GY LL V +E D+ PVIMMS + V+ + GA D+LIKP+R EL+N+W+H
Sbjct: 71 GYNLLQQVGLLEMDL----PVIMMSVDGRTTTVMTGINHGACDYLIKPIRPEELKNIWQH 126
Query: 170 VWRRQ 174
V RR+
Sbjct: 127 VVRRK 131
>AT1G67710.1 | Symbols: ARR11 | ARR11 (RESPONSE REGULATOR 11);
transcription factor/ two-component response regulator |
chr1:25376994-25378905 REVERSE
Length = 521
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 75/124 (60%), Gaps = 5/124 (4%)
Query: 52 LRVLLVEADDSTRQIIAALLRKCSYRVAAVPDGLMAWETLKGRPHSIDLILTEVELPSIS 111
LRVL+V+ D + +I+ +L+KCSY V A L+ R D+++++V +P +
Sbjct: 11 LRVLVVDDDPTWLKILEKMLKKCSYEVTTCGLAREALRLLRERKDGYDIVISDVNMPDMD 70
Query: 112 GYALLTLV-MEHDICKNIPVIMMSSHDSISMVLKCMLKGAADFLIKPVRRNELRNLWRHV 170
G+ LL V +E D+ PVIMMS S V+K + GA D+L+KP+R EL+ +W+HV
Sbjct: 71 GFKLLEHVGLELDL----PVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELKIIWQHV 126
Query: 171 WRRQ 174
R++
Sbjct: 127 LRKK 130
>AT5G58080.1 | Symbols: ARR18 | ARR18 (ARABIDOPSIS RESPONSE
REGULATOR 18); transcription factor/ two-component
response regulator | chr5:23501785-23504099 REVERSE
Length = 618
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 73/122 (59%), Gaps = 4/122 (3%)
Query: 52 LRVLLVEADDSTRQIIAALLRKCSYRVAAVPDGLMAWETLKGRPHSIDLILTEVELPSIS 111
+RVL V+ + + + + LL +C Y V + A E L+ + DL++++VE+P
Sbjct: 1 MRVLAVDDNPTCLRKLEELLLRCKYHVTKTMESRKALEMLRENSNMFDLVISDVEMPDTD 60
Query: 112 GYALLTLVMEHDICKNIPVIMMSSHDSISMVLKCMLKGAADFLIKPVRRNELRNLWRHVW 171
G+ LL + +E D+ PVIM+S+H V+K ++ GA D+L+KPV EL+N+W HV
Sbjct: 61 GFKLLEIGLEMDL----PVIMLSAHSDYDSVMKGIIHGACDYLVKPVGLKELQNIWHHVV 116
Query: 172 RR 173
++
Sbjct: 117 KK 118
>AT3G62670.1 | Symbols: ARR20, MEE41 | ARR20 (ARABIDOPSIS RESPONSE
REGULATOR 20); transcription factor/ two-component
response regulator | chr3:23176556-23178294 REVERSE
Length = 426
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 75/136 (55%), Gaps = 6/136 (4%)
Query: 44 EKFLPRMVLRVLLVEADDSTRQIIAALLRKCSYRVAAVPDGLMAWETLKGRPHSIDLILT 103
E+FL + RVLLV AD ++ + L+ + SY+V G A L H IDL++
Sbjct: 34 EEFLTKSN-RVLLVGADSNSS--LKNLMTQYSYQVTKYESGEEAMAFLMKNKHEIDLVIW 90
Query: 104 EVELPSISGYALLTLVMEHDICKNIPVIMMSSHDSISMVLKCMLKGAADFLIKPVRRNEL 163
+ +P I+G L ++ + ++PV++MS V++ + GA DFL+KPV + +
Sbjct: 91 DFHMPDINGLDALNIIGKQ---MDLPVVIMSHEYKKETVMESIKYGACDFLVKPVSKEVI 147
Query: 164 RNLWRHVWRRQNLTAG 179
LWRHV+R++ +G
Sbjct: 148 AVLWRHVYRKRMSKSG 163
>AT1G10470.1 | Symbols: ARR4, MEE7, ATRR1, IBC7 | ARR4 (RESPONSE
REGULATOR 4); protein binding / transcription regulator/
two-component response regulator | chr1:3442624-3443759
REVERSE
Length = 259
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 76/136 (55%), Gaps = 11/136 (8%)
Query: 56 LVEADDST--RQIIAALLRKCSYRVAAVPDGLMAWETL-----KGRPH----SIDLILTE 104
++ DDS R +I LLR S +V AV G A E L K +DLI+T+
Sbjct: 36 VLAVDDSLVDRIVIERLLRITSCKVTAVDSGWRALEFLGLDNEKASAEFDRLKVDLIITD 95
Query: 105 VELPSISGYALLTLVMEHDICKNIPVIMMSSHDSISMVLKCMLKGAADFLIKPVRRNELR 164
+P ++GY LL + E + +PV++MSS + ++ + +C+ +GA DFL+KPV+ +++
Sbjct: 96 YCMPGMTGYELLKKIKESSNFREVPVVIMSSENVLTRIDRCLEEGAQDFLLKPVKLADVK 155
Query: 165 NLWRHVWRRQNLTAGH 180
L H+ + L+ G+
Sbjct: 156 RLRSHLTKDVKLSNGN 171
>AT1G59940.1 | Symbols: ARR3 | ARR3 (RESPONSE REGULATOR 3);
transcription regulator/ two-component response
regulator | chr1:22065894-22066895 REVERSE
Length = 231
Score = 69.3 bits (168), Expect = 9e-12, Method: Composition-based stats.
Identities = 45/137 (32%), Positives = 76/137 (55%), Gaps = 11/137 (8%)
Query: 53 RVLLVEADDS--TRQIIAALLRKCSYRVAAVPDGLMAWETL---------KGRPHSIDLI 101
+V ++ DDS R +I LLR S +V AV G A E L + +DLI
Sbjct: 32 QVHVLAVDDSLVDRIVIERLLRITSCKVTAVDSGWRALEFLGLDDDKAAVEFDRLKVDLI 91
Query: 102 LTEVELPSISGYALLTLVMEHDICKNIPVIMMSSHDSISMVLKCMLKGAADFLIKPVRRN 161
+T+ +P ++GY LL + E K +PV++MSS + ++ + +C+ +GA DFL+KPV+
Sbjct: 92 ITDYCMPGMTGYELLKKIKESTSFKEVPVVIMSSENVMTRIDRCLEEGAEDFLLKPVKLA 151
Query: 162 ELRNLWRHVWRRQNLTA 178
+++ L ++ R + A
Sbjct: 152 DVKRLRSYLTRDVKVAA 168
>AT1G19050.1 | Symbols: ARR7 | ARR7 (RESPONSE REGULATOR 7);
transcription regulator/ two-component response
regulator | chr1:6577919-6579078 REVERSE
Length = 206
Score = 68.9 bits (167), Expect = 1e-11, Method: Composition-based stats.
Identities = 41/132 (31%), Positives = 74/132 (56%), Gaps = 9/132 (6%)
Query: 52 LRVLLVEADDSTRQIIAALLRKCSYRVAAVPDGLMAWETL-----KGRPH----SIDLIL 102
L VL V+ R++I LLR S +V V G A + L KG + ++LI+
Sbjct: 24 LHVLAVDDSIVDRKVIERLLRISSCKVTTVESGTRALQYLGLDGGKGASNLKDLKVNLIV 83
Query: 103 TEVELPSISGYALLTLVMEHDICKNIPVIMMSSHDSISMVLKCMLKGAADFLIKPVRRNE 162
T+ +P +SGY LL + E + +PV++MSS + + + +C+ +GA +FL+KPV+ +
Sbjct: 84 TDYSMPGLSGYDLLKKIKESSAFREVPVVIMSSENILPRIQECLKEGAEEFLLKPVKLAD 143
Query: 163 LRNLWRHVWRRQ 174
++ + + + R +
Sbjct: 144 VKRIKQLIMRNE 155
>AT3G57040.1 | Symbols: ARR9, ATRR4 | ARR9 (RESPONSE REGULATOR 9);
transcription regulator/ two-component response
regulator | chr3:21110059-21111228 FORWARD
Length = 234
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 72/138 (52%), Gaps = 21/138 (15%)
Query: 56 LVEADDST--RQIIAALLRKCSYRVAAVPDGLMAWETLKGRPHS---------------- 97
++ DDS R++I LL+K S +V V G A E L R +
Sbjct: 11 VLAVDDSLFDRKLIERLLQKSSCQVTTVDSGSKALEFLGLRQSTDSNDPNAFSKAPVNHQ 70
Query: 98 ---IDLILTEVELPSISGYALLTLVMEHDICKNIPVIMMSSHDSISMVLKCMLKGAADFL 154
++LI+T+ +P ++GY LL V E ++IPV++MSS + + + +C+ +GA +F
Sbjct: 71 VVEVNLIITDYCMPGMTGYDLLKKVKESSAFRDIPVVIMSSENVPARISRCLEEGAEEFF 130
Query: 155 IKPVRRNELRNLWRHVWR 172
+KPVR +L L H+ +
Sbjct: 131 LKPVRLADLNKLKPHMMK 148
>AT1G74890.1 | Symbols: ARR15 | ARR15 (RESPONSE REGULATOR 15);
transcription regulator/ two-component response
regulator | chr1:28131590-28132710 REVERSE
Length = 206
Score = 68.2 bits (165), Expect = 2e-11, Method: Composition-based stats.
Identities = 44/144 (30%), Positives = 75/144 (52%), Gaps = 9/144 (6%)
Query: 52 LRVLLVEADDSTRQIIAALLRKCSYRVAAVPDGLMAWE--TLKGRPHS-------IDLIL 102
L VL V+ R++I LL+ + +V V G A + L G S ++LI+
Sbjct: 18 LHVLAVDDSFVDRKVIERLLKISACKVTTVESGTRALQYLGLDGDNGSSGLKDLKVNLIV 77
Query: 103 TEVELPSISGYALLTLVMEHDICKNIPVIMMSSHDSISMVLKCMLKGAADFLIKPVRRNE 162
T+ +P ++GY LL + E + IPV++MSS + + +CM++GA +FL+KPV+ +
Sbjct: 78 TDYSMPGLTGYELLKKIKESSALREIPVVIMSSENIQPRIEQCMIEGAEEFLLKPVKLAD 137
Query: 163 LRNLWRHVWRRQNLTAGHIPQSSP 186
++ L + R G + SP
Sbjct: 138 VKRLKELIMRGGEAEEGKTKKLSP 161
>AT4G00760.1 | Symbols: APRR8, PRR8 | APRR8 (PSEUDO-RESPONSE
REGULATOR 8); transcription regulator/ two-component
response regulator | chr4:327236-329048 REVERSE
Length = 367
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 71/139 (51%), Gaps = 4/139 (2%)
Query: 54 VLLVEADDSTRQIIAALLRKCSYRVAAVPDGLMAWETLKGRPHSIDLILTEVELPSISGY 113
VLL+++D + ++ ++RKC Y+V A + + IDL+L E L ++ Y
Sbjct: 16 VLLLDSDATCLANLSEMIRKCGYKVVATTRADDLPLIINNKDKKIDLVLAEFRLIEMNKY 75
Query: 114 ALLTLVMEHDICKNIPVIMMSSHDSISMVLKCMLKGAADFLIKPVRRNELRNLWRHVWRR 173
LL + IC+ IPV++ +H ++V +C+ +GA L KP+ N+ + LW+ R
Sbjct: 76 ELLEKI--RSICE-IPVVVSGAHVKDAIV-ECLCRGAKLCLEKPLMENDFKILWQFTVSR 131
Query: 174 QNLTAGHIPQSSPDAQHKV 192
Q I + P+ H +
Sbjct: 132 QRNFRSQIDINPPEKNHSI 150
>AT1G49190.1 | Symbols: ARR19 | ARR19 (ARABIDOPSIS RESPONSE
REGULATOR 19); transcription factor/ two-component
response regulator | chr1:18191342-18193598 FORWARD
Length = 608
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 69/122 (56%), Gaps = 5/122 (4%)
Query: 54 VLLVEADDSTRQIIAALLRKCSYRVAAVPDGLMAWETLKGRPHSIDLILTEVELPSISGY 113
VL+V+ + +T + ++++ +Y+V+ D A L H I++++ + +P I G
Sbjct: 36 VLVVDTNFTTLLNMKQIMKQYAYQVSIETDAEKALAFLTSCKHEINIVIWDFHMPGIDGL 95
Query: 114 -ALLTLVMEHDICKNIPVIMMSSHDSISMVLKCMLKGAADFLIKPVRRNELRNLWRHVWR 172
AL ++ + D+ PV++MS + V+K GA D+++KPV+ + N+W+H+ R
Sbjct: 96 QALKSITSKLDL----PVVIMSDDNQTESVMKATFYGACDYVVKPVKEEVMANIWQHIVR 151
Query: 173 RQ 174
++
Sbjct: 152 KR 153
>AT3G48100.1 | Symbols: ARR5, ATRR2, IBC6 | ARR5 (ARABIDOPSIS
RESPONSE REGULATOR 5); transcription regulator/
two-component response regulator |
chr3:17759112-17760740 REVERSE
Length = 184
Score = 67.4 bits (163), Expect = 3e-11, Method: Composition-based stats.
Identities = 42/126 (33%), Positives = 69/126 (54%), Gaps = 10/126 (7%)
Query: 51 VLRVLLVEADDSTRQIIAALLRKCSYRVAAVPDGLMAWE--TLKGRPHS--------IDL 100
+L VL V+ R+ I LLR S +V V A + L G +S I+L
Sbjct: 24 LLHVLAVDDSMVDRKFIERLLRVSSCKVTVVDSATRALQYLGLDGENNSSVGFEDLKINL 83
Query: 101 ILTEVELPSISGYALLTLVMEHDICKNIPVIMMSSHDSISMVLKCMLKGAADFLIKPVRR 160
I+T+ +P ++GY LL + E + IPV++MSS + + + +C+ +GA DFL+KPV+
Sbjct: 84 IMTDYSMPGMTGYELLKKIKESSAFREIPVVIMSSENILPRIDRCLEEGAEDFLLKPVKL 143
Query: 161 NELRNL 166
+++ L
Sbjct: 144 ADVKRL 149
>AT5G62920.1 | Symbols: ARR6 | ARR6 (RESPONSE REGULATOR 6);
transcription regulator/ two-component response
regulator | chr5:25252745-25254158 REVERSE
Length = 186
Score = 66.2 bits (160), Expect = 7e-11, Method: Composition-based stats.
Identities = 39/135 (28%), Positives = 72/135 (53%), Gaps = 9/135 (6%)
Query: 52 LRVLLVEADDSTRQIIAALLRKCSYRVAAVPDGLMAWETLK---------GRPHSIDLIL 102
L VL V+ R+ I LLR S +V V A + L ++LI+
Sbjct: 25 LHVLAVDDSHVDRKFIERLLRVSSCKVTVVDSATRALQYLGLDVEEKSVGFEDLKVNLIM 84
Query: 103 TEVELPSISGYALLTLVMEHDICKNIPVIMMSSHDSISMVLKCMLKGAADFLIKPVRRNE 162
T+ +P ++GY LL + E + +PV++MSS + + + +C+ +GA DFL+KPV+ ++
Sbjct: 85 TDYSMPGMTGYELLKKIKESSAFREVPVVIMSSENILPRIDRCLEEGAEDFLLKPVKLSD 144
Query: 163 LRNLWRHVWRRQNLT 177
++ L + + ++L+
Sbjct: 145 VKRLRDSLMKVEDLS 159
>AT2G41310.1 | Symbols: ATRR3, ARR8 | ATRR3 (RESPONSE REGULATOR 3);
transcription regulator/ two-component response
regulator | chr2:17222280-17223536 FORWARD
Length = 225
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 74/136 (54%), Gaps = 19/136 (13%)
Query: 56 LVEADDST--RQIIAALLRKCSYRVAAVPDGLMAWETLKGR-----PHS----------- 97
++ DDS R++I LL+K S +V V G A E L R P++
Sbjct: 11 VLAVDDSLFDRKMIERLLQKSSCQVTTVDSGSKALEFLGLRVDDNDPNALSTSPQIHQEV 70
Query: 98 -IDLILTEVELPSISGYALLTLVMEHDICKNIPVIMMSSHDSISMVLKCMLKGAADFLIK 156
I+LI+T+ +P ++GY LL V E ++IPV++MSS + + + +C+ +GA +F +K
Sbjct: 71 EINLIITDYCMPGMTGYDLLKKVKESAAFRSIPVVIMSSENVPARISRCLEEGAEEFFLK 130
Query: 157 PVRRNELRNLWRHVWR 172
PV+ +L L H+ +
Sbjct: 131 PVKLADLTKLKPHMMK 146
>AT5G49240.1 | Symbols: APRR4, PRR4 | APRR4 (PSEUDO-RESPONSE
REGULATOR 4); transcription factor/ two-component
response regulator | chr5:19962934-19964351 FORWARD
Length = 292
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 93/191 (48%), Gaps = 10/191 (5%)
Query: 52 LRVLLVEADDSTRQIIAALLRKCSYRVAAVPDGLMAWETLKGRPHSIDLILTEVELPSIS 111
LRVL+ + D S I+ L+K Y+V + A TL+ + DL + +V
Sbjct: 42 LRVLVFDEDPSYLLILERHLQKFQYQVTICNEVNKAMHTLRNHRNRFDLAMIQVNNAEGD 101
Query: 112 GYALLTLVMEHDICKNIPVIMMSSHDSISMVLKCMLKGAADFLIKPVRRNELRNLWRHVW 171
+ L+ + ++P+I++S DS+ V K M+ GAAD+LIKP+R +LR +++H+
Sbjct: 102 IFRFLSEIGSE---MDLPIIIISEDDSVKSVKKWMINGAADYLIKPIRPEDLRIVFKHLV 158
Query: 172 R----RQNLTAGHIPQSSPDAQHKVEAASENNSASDHSSDCATSSHKRKECSEKGNDNQS 227
+ R+++ G +++ + V ++ N S C + + ++ + N
Sbjct: 159 KKMRERRSVVTGEAEKAAGEKSSSVGDSTIRNPNKSKRSSCLEAEVNEE---DRHDHNDR 215
Query: 228 SCTTPYSELRV 238
+C + + RV
Sbjct: 216 ACASSAKKRRV 226
>AT5G24930.1 | Symbols: ATCOL4, COL4 | zinc finger (B-box type)
family protein | chr5:8589325-8590949 FORWARD
Length = 406
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 39/54 (72%)
Query: 638 IPFRSSQREAALTKFRLKRKDRCYEQKVRYQSRKRLAEQRPRVKGQFVRQVQNN 691
+P S++REA + ++R KRK+R +E+ +RY SRK AE RPR+KG+F ++ N
Sbjct: 332 VPLTSAEREARVMRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTDTN 385
>AT3G56380.1 | Symbols: ARR17, RR17 | ARR17 (ARABIDOPSIS RESPONSE
REGULATOR 17); transcription regulator/ two-component
response regulator | chr3:20905480-20906368 FORWARD
Length = 153
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 69/130 (53%), Gaps = 10/130 (7%)
Query: 52 LRVLLVEADDSTRQIIAALLRKCSYRVAAVPDGLMAWETLK-GRPHSID---------LI 101
L VL V+ + R+++ +L+ S +V +GL A E L G P D LI
Sbjct: 20 LHVLAVDDNLIDRKLVERILKISSCKVTTAENGLRALEYLGLGDPQQTDSLTNVMKVNLI 79
Query: 102 LTEVELPSISGYALLTLVMEHDICKNIPVIMMSSHDSISMVLKCMLKGAADFLIKPVRRN 161
+T+ +P ++G+ LL V E K +PV+++SS + + + KC+ GA F+ KP++ +
Sbjct: 80 ITDYCMPGMTGFELLKKVKESSNLKEVPVVILSSENIPTRINKCLASGAQMFMQKPLKLS 139
Query: 162 ELRNLWRHVW 171
++ L H+
Sbjct: 140 DVEKLKCHLL 149
>AT4G18020.5 | Symbols: | APRR2; transcription factor/
two-component response regulator |
chr4:10003991-10006682 REVERSE
Length = 487
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 69/141 (48%), Gaps = 12/141 (8%)
Query: 36 ASSEVVRWEKFLPRMVLRVLLV------EADDSTRQIIAALLRKCSYRVAAVPDGLMAWE 89
++++ +WE F P+ L+VLL+ + D S+ + L Y V D A
Sbjct: 4 TANDLSKWENF-PKG-LKVLLLLNGCDSDGDGSSAAETRSELESMDYIVTTFTDETEALS 61
Query: 90 TLKGRPHSIDLILTEVELPSISGYALLTLVMEHDICKNIPVIMMSSHDSISMVLKCMLKG 149
+ P S + + EV + S + L D+ +P IM+S+ I+ +KC+ G
Sbjct: 62 AVVKNPESFHIAIVEVNM-SAESESFKFLEAAKDV---LPTIMISTDHCITTTMKCIALG 117
Query: 150 AADFLIKPVRRNELRNLWRHV 170
A +FL KP+ +L+N+W+HV
Sbjct: 118 AVEFLQKPLSPEKLKNIWQHV 138
>AT4G18020.4 | Symbols: APRR2, PRR2 | APRR2; transcription factor/
two-component response regulator |
chr4:10003991-10006682 REVERSE
Length = 487
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 69/141 (48%), Gaps = 12/141 (8%)
Query: 36 ASSEVVRWEKFLPRMVLRVLLV------EADDSTRQIIAALLRKCSYRVAAVPDGLMAWE 89
++++ +WE F P+ L+VLL+ + D S+ + L Y V D A
Sbjct: 4 TANDLSKWENF-PKG-LKVLLLLNGCDSDGDGSSAAETRSELESMDYIVTTFTDETEALS 61
Query: 90 TLKGRPHSIDLILTEVELPSISGYALLTLVMEHDICKNIPVIMMSSHDSISMVLKCMLKG 149
+ P S + + EV + S + L D+ +P IM+S+ I+ +KC+ G
Sbjct: 62 AVVKNPESFHIAIVEVNM-SAESESFKFLEAAKDV---LPTIMISTDHCITTTMKCIALG 117
Query: 150 AADFLIKPVRRNELRNLWRHV 170
A +FL KP+ +L+N+W+HV
Sbjct: 118 AVEFLQKPLSPEKLKNIWQHV 138
>AT4G18020.3 | Symbols: APRR2, PRR2 | APRR2; transcription factor/
two-component response regulator |
chr4:10003738-10006682 REVERSE
Length = 535
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 69/140 (49%), Gaps = 12/140 (8%)
Query: 37 SSEVVRWEKFLPRMVLRVLLV------EADDSTRQIIAALLRKCSYRVAAVPDGLMAWET 90
++++ +WE F P+ L+VLL+ + D S+ + L Y V D A
Sbjct: 5 ANDLSKWENF-PKG-LKVLLLLNGCDSDGDGSSAAETRSELESMDYIVTTFTDETEALSA 62
Query: 91 LKGRPHSIDLILTEVELPSISGYALLTLVMEHDICKNIPVIMMSSHDSISMVLKCMLKGA 150
+ P S + + EV + S + L D+ +P IM+S+ I+ +KC+ GA
Sbjct: 63 VVKNPESFHIAIVEVNM-SAESESFKFLEAAKDV---LPTIMISTDHCITTTMKCIALGA 118
Query: 151 ADFLIKPVRRNELRNLWRHV 170
+FL KP+ +L+N+W+HV
Sbjct: 119 VEFLQKPLSPEKLKNIWQHV 138
>AT4G18020.2 | Symbols: APRR2, PRR2 | APRR2; transcription factor/
two-component response regulator |
chr4:10003738-10006682 REVERSE
Length = 535
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 69/140 (49%), Gaps = 12/140 (8%)
Query: 37 SSEVVRWEKFLPRMVLRVLLV------EADDSTRQIIAALLRKCSYRVAAVPDGLMAWET 90
++++ +WE F P+ L+VLL+ + D S+ + L Y V D A
Sbjct: 5 ANDLSKWENF-PKG-LKVLLLLNGCDSDGDGSSAAETRSELESMDYIVTTFTDETEALSA 62
Query: 91 LKGRPHSIDLILTEVELPSISGYALLTLVMEHDICKNIPVIMMSSHDSISMVLKCMLKGA 150
+ P S + + EV + S + L D+ +P IM+S+ I+ +KC+ GA
Sbjct: 63 VVKNPESFHIAIVEVNM-SAESESFKFLEAAKDV---LPTIMISTDHCITTTMKCIALGA 118
Query: 151 ADFLIKPVRRNELRNLWRHV 170
+FL KP+ +L+N+W+HV
Sbjct: 119 VEFLQKPLSPEKLKNIWQHV 138
>AT4G18020.1 | Symbols: APRR2, PRR2 | APRR2; transcription factor/
two-component response regulator |
chr4:10003738-10006682 REVERSE
Length = 535
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 69/140 (49%), Gaps = 12/140 (8%)
Query: 37 SSEVVRWEKFLPRMVLRVLLV------EADDSTRQIIAALLRKCSYRVAAVPDGLMAWET 90
++++ +WE F P+ L+VLL+ + D S+ + L Y V D A
Sbjct: 5 ANDLSKWENF-PKG-LKVLLLLNGCDSDGDGSSAAETRSELESMDYIVTTFTDETEALSA 62
Query: 91 LKGRPHSIDLILTEVELPSISGYALLTLVMEHDICKNIPVIMMSSHDSISMVLKCMLKGA 150
+ P S + + EV + S + L D+ +P IM+S+ I+ +KC+ GA
Sbjct: 63 VVKNPESFHIAIVEVNM-SAESESFKFLEAAKDV---LPTIMISTDHCITTTMKCIALGA 118
Query: 151 ADFLIKPVRRNELRNLWRHV 170
+FL KP+ +L+N+W+HV
Sbjct: 119 VEFLQKPLSPEKLKNIWQHV 138
>AT5G57180.2 | Symbols: CIA2 | CIA2 (CHLOROPLAST IMPORT APPARATUS
2); transcription regulator | chr5:23168393-23170763
FORWARD
Length = 435
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 39/54 (72%)
Query: 642 SSQREAALTKFRLKRKDRCYEQKVRYQSRKRLAEQRPRVKGQFVRQVQNNAPAA 695
S REA++ +++ KR+ R + +K+RYQ RK A+QRPR+KG+FVR+ + P+
Sbjct: 380 SGMREASVLRYKEKRRTRLFSKKIRYQVRKLNADQRPRMKGRFVRRPNESTPSG 433
>AT1G68210.1 | Symbols: APRR6, PRR6 | APRR6 (PSEUDO-RESPONSE
REGULATOR 6); transcription regulator/ two-component
response regulator | chr1:25565983-25569302 FORWARD
Length = 755
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 67/123 (54%), Gaps = 4/123 (3%)
Query: 52 LRVLLVEADDSTRQIIAALLRKCSYRVAAVPDGLMAWETLKGRPHSIDLILTEVELPSIS 111
+ +LL++ D ++ + ++L++ S RV +V A ++ + I LI+ +E+P I
Sbjct: 13 ISILLIDHDTASIASLTSMLQQFSKRVMSVDVASKALSMIEKQKKEIGLIIANIEMPHID 72
Query: 112 GYALLTLVMEHDICKNIPVIMMSSHDSISMVLKCMLKGAADFLIKPVRRNELRNLWRHVW 171
++ L ++ K+IP+I+++ + K A L KP+ ++++N+W+HV+
Sbjct: 73 SHSFLNALL----LKDIPLILINPEIKTKEPSDLLTKRACFSLDKPISNDDIKNMWQHVF 128
Query: 172 RRQ 174
++
Sbjct: 129 SKK 131
>AT4G25990.1 | Symbols: CIL | CIL | chr4:13191937-13193543 REVERSE
Length = 394
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 37/46 (80%)
Query: 642 SSQREAALTKFRLKRKDRCYEQKVRYQSRKRLAEQRPRVKGQFVRQ 687
S REA++ +++ KR++R + +K+RYQ RK A+QRPR+KG+FVR+
Sbjct: 338 SGMREASVLRYKEKRRNRLFSKKIRYQVRKLNADQRPRMKGRFVRR 383
>AT5G57660.1 | Symbols: ATCOL5, COL5 | zinc finger (B-box type)
family protein | chr5:23355573-23356729 FORWARD
Length = 355
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 35/48 (72%)
Query: 642 SSQREAALTKFRLKRKDRCYEQKVRYQSRKRLAEQRPRVKGQFVRQVQ 689
S REA + ++R KRK+R +E+ +RY SRK AE RPR+KG+F ++ +
Sbjct: 282 SMDREARVLRYREKRKNRKFEKTIRYASRKAYAESRPRIKGRFAKRTE 329
>AT1G49130.1 | Symbols: | zinc finger (B-box type) family protein |
chr1:18174741-18175936 REVERSE
Length = 326
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 38/45 (84%)
Query: 643 SQREAALTKFRLKRKDRCYEQKVRYQSRKRLAEQRPRVKGQFVRQ 687
S+REA + ++R KRK+R +E+K+RY+ RK A++RPR+KG+FVR+
Sbjct: 276 SEREARVWRYRDKRKNRLFEKKIRYEVRKVNADKRPRMKGRFVRR 320
>AT1G49130.2 | Symbols: | zinc finger (B-box type) family protein |
chr1:18174741-18175811 REVERSE
Length = 319
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 38/45 (84%)
Query: 643 SQREAALTKFRLKRKDRCYEQKVRYQSRKRLAEQRPRVKGQFVRQ 687
S+REA + ++R KRK+R +E+K+RY+ RK A++RPR+KG+FVR+
Sbjct: 269 SEREARVWRYRDKRKNRLFEKKIRYEVRKVNADKRPRMKGRFVRR 313
>AT2G24790.1 | Symbols: COL3, ATCOL3 | COL3 (CONSTANS-LIKE 3);
protein binding / transcription factor/ zinc ion binding
| chr2:10566959-10567946 FORWARD
Length = 294
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 35/45 (77%)
Query: 643 SQREAALTKFRLKRKDRCYEQKVRYQSRKRLAEQRPRVKGQFVRQ 687
++REA + ++R KRK+R +E+ +RY SRK AE RPR+KG+F ++
Sbjct: 227 AEREARVLRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKR 271
>AT5G14370.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN: 21
plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: CCT domain
(InterPro:IPR010402); BEST Arabidopsis thaliana protein
match is: CIL (TAIR:AT4G25990.1); Has 1815 Blast hits to
1506 proteins in 139 species: Archae - 0; Bacteria - 8;
Metazoa - 291; Fungi - 53; Plants - 1145; Viruses - 0;
Other Eukaryotes - 318 (source: NCBI BLink). |
chr5:4632147-4633651 REVERSE
Length = 339
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 36/43 (83%)
Query: 645 REAALTKFRLKRKDRCYEQKVRYQSRKRLAEQRPRVKGQFVRQ 687
REA+L +++ KR++R + +++RYQ RK AE+RPRVKG+FV++
Sbjct: 294 REASLLRYKEKRQNRLFSKRIRYQVRKLNAEKRPRVKGRFVKR 336
>AT1G73870.1 | Symbols: | zinc finger (B-box type) family protein |
chr1:27779214-27780522 FORWARD
Length = 392
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 39/54 (72%), Gaps = 2/54 (3%)
Query: 634 KDGGIPFRSSQREAALTKFRLKRKDRCYEQKVRYQSRKRLAEQRPRVKGQFVRQ 687
+DGG +REA + +++ KR+ R + +K+RY+ RK AEQRPR+KG+FV++
Sbjct: 336 RDGGGS--DGEREARVLRYKEKRRTRLFSKKIRYEVRKLNAEQRPRIKGRFVKR 387
>AT2G40670.1 | Symbols: ARR16, RR16 | ARR16 (ARABIDOPSIS RESPONSE
REGULATOR 16); transcription regulator/ two-component
response regulator | chr2:16970258-16971120 FORWARD
Length = 164
Score = 53.1 bits (126), Expect = 6e-07, Method: Composition-based stats.
Identities = 35/131 (26%), Positives = 64/131 (48%), Gaps = 12/131 (9%)
Query: 52 LRVLLVEADDSTRQIIAALLRKCSYRVAAVPDGLMAWE------------TLKGRPHSID 99
L VL V+ + R+++ LL+ +V + L A E L +
Sbjct: 29 LHVLAVDDNLIDRKLVERLLKISCCKVTTAENALRALEYLGLGDQNQHIDALTCNVMKVS 88
Query: 100 LILTEVELPSISGYALLTLVMEHDICKNIPVIMMSSHDSISMVLKCMLKGAADFLIKPVR 159
LI+T+ +P ++G+ LL V E + +PV++MSS + + + KC+ GA F+ KP++
Sbjct: 89 LIITDYCMPGMTGFELLKKVKESSNLREVPVVIMSSENIPTRINKCLASGAQMFMQKPLK 148
Query: 160 RNELRNLWRHV 170
++ L H+
Sbjct: 149 LADVEKLKCHL 159
>AT1G25440.1 | Symbols: | zinc finger (B-box type) family protein |
chr1:8933939-8935284 REVERSE
Length = 417
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 36/48 (75%)
Query: 640 FRSSQREAALTKFRLKRKDRCYEQKVRYQSRKRLAEQRPRVKGQFVRQ 687
F REA ++++R KR+ R + +K+RY+ RK AE+RPR+KG+FV++
Sbjct: 356 FGDGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKR 403
>AT5G07210.1 | Symbols: ARR21 | ARR21 (ARABIDOPSIS RESPONSE
REGULATOR 21); transcription factor/ two-component
response regulator | chr5:2252237-2256018 FORWARD
Length = 621
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 65/128 (50%), Gaps = 14/128 (10%)
Query: 50 MVLRVLLVEADDSTRQIIAALLRKCSYR--------VAAVPDGLMAWETLKGRPHSIDLI 101
+ + V++V+ D I++ +L+ YR V AV D A TLK + +IDLI
Sbjct: 14 LKINVMVVDDDHVFLDIMSRMLQHSKYRDPSVMEIAVIAVDDPKKALSTLKIQRDNIDLI 73
Query: 102 LTEVELPSISGYALLTLVMEHDICKNIPVIMMSSH-DSISMVLKCMLKGAADFLIKPVRR 160
+T+ +P ++G L + + N+PV++MSS + L C GA F+ KP+
Sbjct: 74 ITDYYMPGMNGLQLKKQITQE--FGNLPVLVMSSDTNKEEESLSC---GAMGFIPKPIHP 128
Query: 161 NELRNLWR 168
+L +++
Sbjct: 129 TDLTKIYQ 136
>AT1G68520.1 | Symbols: | zinc finger (B-box type) family protein |
chr1:25709331-25710749 REVERSE
Length = 406
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 38/53 (71%), Gaps = 7/53 (13%)
Query: 635 DGGIPFRSSQREAALTKFRLKRKDRCYEQKVRYQSRKRLAEQRPRVKGQFVRQ 687
DGG REA ++++R KR+ R + +K+RY+ RK AE+RPR+KG+FV++
Sbjct: 354 DGG-------REARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKR 399
>AT1G07050.1 | Symbols: | CONSTANS-like protein-related |
chr1:2164327-2165133 REVERSE
Length = 195
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 42/60 (70%), Gaps = 4/60 (6%)
Query: 632 SLKDGGIPF----RSSQREAALTKFRLKRKDRCYEQKVRYQSRKRLAEQRPRVKGQFVRQ 687
S+ G +P R+ +REA++ +++ KR+ R + +K+RYQ RK A++RPR KG+FV++
Sbjct: 134 SVYRGEVPVIEEKRNMRREASVLRYKEKRQSRLFSKKIRYQVRKLNADKRPRFKGRFVKR 193
>AT1G51600.2 | Symbols: ZML2, TIFY2A | TIFY2A; sequence-specific DNA
binding / transcription factor/ zinc ion binding |
chr1:19133176-19135252 FORWARD
Length = 302
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 37/61 (60%), Gaps = 2/61 (3%)
Query: 637 GIPFRSS--QREAALTKFRLKRKDRCYEQKVRYQSRKRLAEQRPRVKGQFVRQVQNNAPA 694
G P R S QR A+L +FR KRK R +++K+RY RK +A + R KGQF NN A
Sbjct: 137 GTPQRFSIPQRLASLVRFREKRKGRNFDKKIRYTVRKEVALRMQRNKGQFTSAKSNNDEA 196
Query: 695 A 695
A
Sbjct: 197 A 197
>AT1G51600.1 | Symbols: ZML2, TIFY2A | TIFY2A; sequence-specific DNA
binding / transcription factor/ zinc ion binding |
chr1:19133176-19135252 FORWARD
Length = 302
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 37/61 (60%), Gaps = 2/61 (3%)
Query: 637 GIPFRSS--QREAALTKFRLKRKDRCYEQKVRYQSRKRLAEQRPRVKGQFVRQVQNNAPA 694
G P R S QR A+L +FR KRK R +++K+RY RK +A + R KGQF NN A
Sbjct: 137 GTPQRFSIPQRLASLVRFREKRKGRNFDKKIRYTVRKEVALRMQRNKGQFTSAKSNNDEA 196
Query: 695 A 695
A
Sbjct: 197 A 197
>AT5G15850.1 | Symbols: COL1, ATCOL1 | COL1 (constans-like 1);
transcription factor/ zinc ion binding |
chr5:5176297-5177473 REVERSE
Length = 355
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 33/43 (76%)
Query: 645 REAALTKFRLKRKDRCYEQKVRYQSRKRLAEQRPRVKGQFVRQ 687
REA + ++R K+K R +E+ +RY SRK AE+RPR+KG+F ++
Sbjct: 286 REARVLRYREKKKMRKFEKTIRYASRKAYAEKRPRIKGRFAKK 328
>AT3G02380.1 | Symbols: COL2 | COL2 (constans-like 2); transcription
factor/ zinc ion binding | chr3:487438-488624 REVERSE
Length = 347
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 33/44 (75%)
Query: 644 QREAALTKFRLKRKDRCYEQKVRYQSRKRLAEQRPRVKGQFVRQ 687
+REA + ++R K+K R +++ +RY SRK AE RPR+KG+F ++
Sbjct: 277 EREARVLRYREKKKTRKFDKTIRYASRKAYAEIRPRIKGRFAKR 320
>AT1G63820.1 | Symbols: | INVOLVED IN: biological_process unknown;
LOCATED IN: cellular_component unknown; EXPRESSED IN:
flower, root; EXPRESSED DURING: petal differentiation
and expansion stage; CONTAINS InterPro DOMAIN/s: CCT
domain (InterPro:IPR010402); BEST Arabidopsis thaliana
protein match is: unknown protein (TAIR:AT5G41380.1);
Has 907 Blast hits to 907 proteins in 64 species: Archae
- 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 882;
Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink).
| chr1:23682529-23684050 REVERSE
Length = 293
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 47/87 (54%), Gaps = 7/87 (8%)
Query: 600 DHNKSSAYGSSCSRSDGNTTLAAAPEEVVKPESLKDGGIPFRSSQREAALTKFRLKRKDR 659
D +Y S + TT+ + E+ SL+ G + S +R+ ++K+R KR R
Sbjct: 154 DFTGQRSYSSPLAAESSPTTVFSGDEQ-----SLRVGR--YSSEERKEKISKYRAKRTQR 206
Query: 660 CYEQKVRYQSRKRLAEQRPRVKGQFVR 686
+ + ++Y RK LA+ RPRV+G+F R
Sbjct: 207 NFTKTIKYACRKTLADNRPRVRGRFAR 233