Jatropha Genome Database

JcCA0315721.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0315721.20 + phase: 0 
         (143 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G63095.1 | Symbols:  | Encodes a Protease inhibitor/seed stor...    75   1e-14

>AT3G63095.1 | Symbols:  | Encodes a Protease inhibitor/seed
           storage/LTP family protein | chr3:23315506-23316258
           FORWARD
          Length = 250

 Score = 75.5 bits (184), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 28/53 (52%), Positives = 40/53 (75%)

Query: 89  AVENCCRWLSDVDNECVCDLLIRLPIFLARPAHQFTIVIGDTCTITFSCSGRV 141
           A + CC+WL  +DNECVCDLL+RLP  LA+P H +T+ + ++C +TF C GR+
Sbjct: 196 AQQECCKWLKQMDNECVCDLLVRLPPLLAKPIHNYTVFVDESCIVTFVCGGRL 248