Jatropha Genome Database

JcCA0315721.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0315721.10 + phase: 0 
         (200 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G63095.1 | Symbols:  | Encodes a Protease inhibitor/seed stor...    87   8e-18

>AT3G63095.1 | Symbols:  | Encodes a Protease inhibitor/seed
           storage/LTP family protein | chr3:23315506-23316258
           FORWARD
          Length = 250

 Score = 86.7 bits (213), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 35/58 (60%), Positives = 47/58 (81%)

Query: 140 RELTAQQNCCRWLNELDDECVCELLVRLPPFLSRPAHVYTLYLDESCNVTYACQGRII 197
            E  AQQ CC+WL ++D+ECVC+LLVRLPP L++P H YT+++DESC VT+ C GR+I
Sbjct: 192 EETFAQQECCKWLKQMDNECVCDLLVRLPPLLAKPIHNYTVFVDESCIVTFVCGGRLI 249