Jatropha Genome Database

JcCA0315581.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0315581.20 - phase: 0 
         (270 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G44770.1 | Symbols:  | unknown protein | chr1:16907834-169094...   255   2e-68
AT1G44770.2 | Symbols:  | unknown protein | chr1:16907834-169094...   251   3e-67
AT5G49710.3 | Symbols:  | unknown protein | chr5:20195561-201971...    52   6e-07
AT5G49710.1 | Symbols:  | unknown protein | chr5:20195561-201971...    52   6e-07

>AT1G44770.1 | Symbols:  | unknown protein | chr1:16907834-16909409
           REVERSE
          Length = 271

 Score =  255 bits (651), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 130/271 (47%), Positives = 172/271 (63%), Gaps = 1/271 (0%)

Query: 1   MGGHRAIEAAKTVIEVADVAWKAME-FTXXXXXXXXXXXXXXITHASIDEELESLRSENR 59
           M  H AIE  KTV+EVADVAW A+E +                     D ELE+LR ENR
Sbjct: 1   MTSHHAIEVTKTVLEVADVAWTAVETYHHHHHHQDENHESTNPISDPRDRELEALRQENR 60

Query: 60  CXXXXXXXXXXXXXXXXXXPCLLNDCPPDLHARLVATVDSEDFLARLKSLQLASANISGI 119
                                  +DCP DL+ARLV  V S DFLARL++L+ A +N +  
Sbjct: 61  RLRTLLESNLKLFETLAESAAFSHDCPSDLYARLVTMVTSRDFLARLENLRQALSNGTQN 120

Query: 120 EFPFKEATGDDMHSAEMLINVSNEEPSWWVWVTEEMAPNNIEERSRIDNENYXXXXXXXX 179
           +FPFKE T DD+ + E+LI + ++EPSWWV VT++M P+N+EE+S IDNE+Y        
Sbjct: 121 QFPFKEPTEDDVKTVEVLIEMDHQEPSWWVLVTDDMVPSNVEEQSAIDNEHYIVVNEEHV 180

Query: 180 XXXXXNFMAKCILSNPKAQKMTPEELQKSLEKALEGVSKWEKILNIWHAGQLFYTLATWG 239
                +F+AKCI+SNPKA+ + PEELQK L + +  +SK  K+++IWHAG++FYTL+TWG
Sbjct: 181 IDAVAHFLAKCIMSNPKAKNLKPEELQKLLVQEVTALSKVGKVVDIWHAGKMFYTLSTWG 240

Query: 240 LALWGLYRTRSILKLAAKGVHKTSKVVLKAL 270
           LA  GLY+ R +LK+AAKGVH TSKVVL+AL
Sbjct: 241 LAFGGLYQARGVLKIAAKGVHATSKVVLRAL 271


>AT1G44770.2 | Symbols:  | unknown protein | chr1:16907834-16909409
           REVERSE
          Length = 270

 Score =  251 bits (642), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 130/271 (47%), Positives = 172/271 (63%), Gaps = 2/271 (0%)

Query: 1   MGGHRAIEAAKTVIEVADVAWKAME-FTXXXXXXXXXXXXXXITHASIDEELESLRSENR 59
           M  H AIE  KTV+EVADVAW A+E +                     D ELE+LR ENR
Sbjct: 1   MTSHHAIEVTKTVLEVADVAWTAVETYHHHHHHQDENHESTNPISDPRDRELEALRQENR 60

Query: 60  CXXXXXXXXXXXXXXXXXXPCLLNDCPPDLHARLVATVDSEDFLARLKSLQLASANISGI 119
                                  +DCP DL+ARLV  V S DFLARL++L+ A +N +  
Sbjct: 61  RLRTLLESNLKLFETLAESAAFSHDCPSDLYARLVTMVTSRDFLARLENLRQALSNGTQN 120

Query: 120 EFPFKEATGDDMHSAEMLINVSNEEPSWWVWVTEEMAPNNIEERSRIDNENYXXXXXXXX 179
           +FPFKE T DD+ + E+LI + ++EPSWWV VT++M P+N+EE+S IDNE+Y        
Sbjct: 121 QFPFKEPT-DDVKTVEVLIEMDHQEPSWWVLVTDDMVPSNVEEQSAIDNEHYIVVNEEHV 179

Query: 180 XXXXXNFMAKCILSNPKAQKMTPEELQKSLEKALEGVSKWEKILNIWHAGQLFYTLATWG 239
                +F+AKCI+SNPKA+ + PEELQK L + +  +SK  K+++IWHAG++FYTL+TWG
Sbjct: 180 IDAVAHFLAKCIMSNPKAKNLKPEELQKLLVQEVTALSKVGKVVDIWHAGKMFYTLSTWG 239

Query: 240 LALWGLYRTRSILKLAAKGVHKTSKVVLKAL 270
           LA  GLY+ R +LK+AAKGVH TSKVVL+AL
Sbjct: 240 LAFGGLYQARGVLKIAAKGVHATSKVVLRAL 270


>AT5G49710.3 | Symbols:  | unknown protein | chr5:20195561-20197188
           FORWARD
          Length = 235

 Score = 51.6 bits (122), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 47/85 (55%), Gaps = 4/85 (4%)

Query: 186 FMAKCILSNPKAQKMTPEELQKSLEKALEGVSKWEKILNIWHAGQLFYTLATWGLALWGL 245
           FMA  + S  + + +TPE+LQK+L +     ++  K+   W   ++ Y +A+W   + G+
Sbjct: 151 FMATYLQSLKQTKDLTPEQLQKALSRMFSVKNRKGKLRKAWDGSKVAYNVASWSATVIGI 210

Query: 246 YRTRSILKLAAKG----VHKTSKVV 266
           Y+   IL++A+K      H  SK+V
Sbjct: 211 YQNPVILRVASKAFWASCHVISKLV 235


>AT5G49710.1 | Symbols:  | unknown protein | chr5:20195561-20197188
           FORWARD
          Length = 234

 Score = 51.6 bits (122), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 47/85 (55%), Gaps = 4/85 (4%)

Query: 186 FMAKCILSNPKAQKMTPEELQKSLEKALEGVSKWEKILNIWHAGQLFYTLATWGLALWGL 245
           FMA  + S  + + +TPE+LQK+L +     ++  K+   W   ++ Y +A+W   + G+
Sbjct: 150 FMATYLQSLKQTKDLTPEQLQKALSRMFSVKNRKGKLRKAWDGSKVAYNVASWSATVIGI 209

Query: 246 YRTRSILKLAAKG----VHKTSKVV 266
           Y+   IL++A+K      H  SK+V
Sbjct: 210 YQNPVILRVASKAFWASCHVISKLV 234