Jatropha Genome Database

JcCA0315091.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0315091.10 + phase: 2 /partial
         (121 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G14820.1 | Symbols:  | SEC14 cytosolic factor family protein ...   156   3e-39
AT1G14820.2 | Symbols:  | SEC14 cytosolic factor family protein ...   156   3e-39
AT1G14820.3 | Symbols:  | SEC14 cytosolic factor family protein ...   155   4e-39
AT1G01630.1 | Symbols:  | SEC14 cytosolic factor, putative / pho...    79   4e-16

>AT1G14820.1 | Symbols:  | SEC14 cytosolic factor family protein /
           phosphoglyceride transfer family protein |
           chr1:5105237-5106454 REVERSE
          Length = 239

 Score =  156 bits (394), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 74/115 (64%), Positives = 89/115 (77%)

Query: 4   GREIGNEKLIGILDLQQITYRNTDARGLITGFQFLQAYYPERLAKCFILHMPXXXXXXXX 63
           G+E+G EKL+ ++DL  ITY+N DARGLITGFQFLQ+YYPERLAKC+ILHMP        
Sbjct: 114 GKEVGGEKLVAVIDLANITYKNLDARGLITGFQFLQSYYPERLAKCYILHMPGFFVTVWK 173

Query: 64  XXXXXLEKATQEKIVIVSNEEERENFMKEIGEEILPEEYGGQAKLVPIQDVVLPQ 118
                LEKATQEKIVIV++ EE+  F +EIG + LPEEYGG+AKL  IQDV+LPQ
Sbjct: 174 FVCRFLEKATQEKIVIVTDGEEQRKFEEEIGADALPEEYGGRAKLTAIQDVLLPQ 228


>AT1G14820.2 | Symbols:  | SEC14 cytosolic factor family protein /
           phosphoglyceride transfer family protein |
           chr1:5105237-5106454 REVERSE
          Length = 239

 Score =  156 bits (394), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 74/115 (64%), Positives = 89/115 (77%)

Query: 4   GREIGNEKLIGILDLQQITYRNTDARGLITGFQFLQAYYPERLAKCFILHMPXXXXXXXX 63
           G+E+G EKL+ ++DL  ITY+N DARGLITGFQFLQ+YYPERLAKC+ILHMP        
Sbjct: 114 GKEVGGEKLVAVIDLANITYKNLDARGLITGFQFLQSYYPERLAKCYILHMPGFFVTVWK 173

Query: 64  XXXXXLEKATQEKIVIVSNEEERENFMKEIGEEILPEEYGGQAKLVPIQDVVLPQ 118
                LEKATQEKIVIV++ EE+  F +EIG + LPEEYGG+AKL  IQDV+LPQ
Sbjct: 174 FVCRFLEKATQEKIVIVTDGEEQRKFEEEIGADALPEEYGGRAKLTAIQDVLLPQ 228


>AT1G14820.3 | Symbols:  | SEC14 cytosolic factor family protein /
           phosphoglyceride transfer family protein |
           chr1:5105237-5106793 REVERSE
          Length = 252

 Score =  155 bits (393), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 74/115 (64%), Positives = 89/115 (77%)

Query: 4   GREIGNEKLIGILDLQQITYRNTDARGLITGFQFLQAYYPERLAKCFILHMPXXXXXXXX 63
           G+E+G EKL+ ++DL  ITY+N DARGLITGFQFLQ+YYPERLAKC+ILHMP        
Sbjct: 127 GKEVGGEKLVAVIDLANITYKNLDARGLITGFQFLQSYYPERLAKCYILHMPGFFVTVWK 186

Query: 64  XXXXXLEKATQEKIVIVSNEEERENFMKEIGEEILPEEYGGQAKLVPIQDVVLPQ 118
                LEKATQEKIVIV++ EE+  F +EIG + LPEEYGG+AKL  IQDV+LPQ
Sbjct: 187 FVCRFLEKATQEKIVIVTDGEEQRKFEEEIGADALPEEYGGRAKLTAIQDVLLPQ 241


>AT1G01630.1 | Symbols:  | SEC14 cytosolic factor, putative /
           phosphoglyceride transfer protein, putative |
           chr1:229206-230675 FORWARD
          Length = 255

 Score = 79.3 bits (194), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 41/107 (38%), Positives = 57/107 (53%)

Query: 8   GNEKLIGILDLQQITYRNTDARGLITGFQFLQAYYPERLAKCFILHMPXXXXXXXXXXXX 67
           G EK + I DLQ   Y N D RG +     LQ  YPERL K +I+H P            
Sbjct: 149 GQEKFVAIGDLQGWGYSNCDIRGYLAALSTLQDCYPERLGKLYIVHAPYIFMTAWKVIYP 208

Query: 68  XLEKATQEKIVIVSNEEERENFMKEIGEEILPEEYGGQAKLVPIQDV 114
            ++  T++KIV V N++     +++I E  LP+ YGG+  LVPIQ+ 
Sbjct: 209 FIDANTKKKIVFVENKKLTPTLLEDIDESQLPDIYGGKLPLVPIQET 255