Jatropha Genome Database

JcCA0314181.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0314181.20 - phase: 0 /partial
         (392 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G23940.1 | Symbols:  | dehydratase family | chr3:8648780-8652...   608   e-174

>AT3G23940.1 | Symbols:  | dehydratase family | chr3:8648780-8652323
           FORWARD
          Length = 608

 Score =  608 bits (1567), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 299/391 (76%), Positives = 333/391 (85%)

Query: 2   YGEYVNGSISDEGRKNVVRNSCPGAGACGGMYTANTMASAIEAMGMSLPYSSSIPAESPL 61
           YGE+V+GSISDE RK V+ +SCPGAGACGGMYTANTMASAIEAMGMSLPYSSSIPAE PL
Sbjct: 218 YGEFVSGSISDEQRKTVLHHSCPGAGACGGMYTANTMASAIEAMGMSLPYSSSIPAEDPL 277

Query: 62  KLDECRLAGKYLLELLKMDLKPRDIITRQSLRNAMVIVMALGGSTNAVLHLIAIARSVGL 121
           KLDECRLAGKYLLELLKMDLKPRDIIT +SLRNAMV VMALGGSTNAVLHLIAIARSVGL
Sbjct: 278 KLDECRLAGKYLLELLKMDLKPRDIITPKSLRNAMVSVMALGGSTNAVLHLIAIARSVGL 337

Query: 122 ELKLDDFQKVSDEVPFLADLKPSGKYVMEDVHKIGGTPAVLRYLLERGFLDGDCLTVTGK 181
           EL LDDFQKVSD VPFLADLKPSGKYVMED+HKIGGTPAVLRYLLE G +DGDC+TVTG+
Sbjct: 338 ELTLDDFQKVSDAVPFLADLKPSGKYVMEDIHKIGGTPAVLRYLLELGLMDGDCMTVTGQ 397

Query: 182 TLAENVQNCPPLSEGQDIIRSLENPIKKTGHIQILRGNLAPEGSVAKITGKEGLYFSGPA 241
           TLA+N++N P L+EGQ+IIR L NPIK+TGHIQILRG+LAP+GSVAKITGKEGLYFSGPA
Sbjct: 398 TLAQNLENVPSLTEGQEIIRPLSNPIKETGHIQILRGDLAPDGSVAKITGKEGLYFSGPA 457

Query: 242 LVFEGEEAMIRAITENPKNFKGKVVVIRXXXXXXXXXXXXXLTPTSAIMGAGLGKDCALL 301
           LVFEGEE+M+ AI+ +P +FKG VVVIR             LTPTSAIMGAGLGK+CALL
Sbjct: 458 LVFEGEESMLAAISADPMSFKGTVVVIRGEGPKGGPGMPEMLTPTSAIMGAGLGKECALL 517

Query: 302 TDGRXXXXXXXXXXXXXCPEAQEGGPIGLLRNGDTIKIDVQERRIDVELTDKEMEERRKN 361
           TDGR             CPEAQEGGPIGL++NGD I ID+ ++RID +++ +EM +RRK 
Sbjct: 518 TDGRFSGGSHGFVVGHICPEAQEGGPIGLIKNGDIITIDIGKKRIDTQVSPEEMNDRRKK 577

Query: 362 WSPPPYKATCGVLYKYIKNVCSASRGCVTDE 392
           W+ P YK   GVLYKYIKNV SAS GCVTDE
Sbjct: 578 WTAPAYKVNRGVLYKYIKNVQSASDGCVTDE 608