Jatropha Genome Database

JcCA0314171.20

BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0314171.20 + phase: 0 
         (306 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G31050.1 | Symbols:  | lipoyltransferase (LIP2p) | chr4:15114...   357   8e-99
AT1G47580.1 | Symbols:  | lipoyltransferase, putative | chr1:174...   214   8e-56
AT1G04640.2 | Symbols: LIP2 | LIP2 (LIPOYLTRANSFERASE 2); lipoyl...   132   4e-31
AT1G04640.1 | Symbols: LIP2 | LIP2 (LIPOYLTRANSFERASE 2); lipoyl...   132   4e-31

>AT4G31050.1 | Symbols:  | lipoyltransferase (LIP2p) |
           chr4:15114345-15115443 FORWARD
          Length = 278

 Score =  357 bits (915), Expect = 8e-99,   Method: Compositional matrix adjust.
 Identities = 170/240 (70%), Positives = 201/240 (83%), Gaps = 9/240 (3%)

Query: 51  KKCELFDLCKTLVPYGDAWNWQKDIVKEKKAMIERNEEFPDTLIVLQHRPVYTLGTGSSV 110
           +KC  FDL   LVPY  AW+WQK IV+EKK +I+RN++  DT+I+LQH PVYT+GT S+ 
Sbjct: 43  RKCLCFDLYDKLVPYKKAWSWQKSIVEEKKTLIDRNQDCADTVILLQHSPVYTMGTASTE 102

Query: 111 GYLNFDVKDAPFEVYRTERGGEVTYHGPGQLVMYPIINLRNHEMDLHWYLRALEEVVIRV 170
            YLNFD+KDAPF VYRTERGGEVTYHGPGQLVMYPIINLRNHEMDLHWYLR LEE+VIRV
Sbjct: 103 DYLNFDIKDAPFNVYRTERGGEVTYHGPGQLVMYPIINLRNHEMDLHWYLRMLEEIVIRV 162

Query: 171 LASTFSIEASRVEGLTGVWVGDEKVAAIGIKVSQWITYHGLALNVTTDLTPFNWIVPCGI 230
           L+STFSI+ASR++GLTGVWVG++KVAAIGI+VS+WITYHGLALNVTTDLTPFNWIVPCGI
Sbjct: 163 LSSTFSIKASRLDGLTGVWVGNQKVAAIGIRVSKWITYHGLALNVTTDLTPFNWIVPCGI 222

Query: 231 RNRKVGSIKGLLLQQIDSCLYENGDDPEFVDSHLIDTTYKSLVREFSDIFQLNIYHKTVS 290
           R+RKVG+IKGLL         E+G+     D  LID  ++SL++EFS+ FQL I  +TVS
Sbjct: 223 RDRKVGNIKGLL---------EDGEHGMVDDLRLIDIVHESLLKEFSEAFQLQIEKQTVS 273


>AT1G47580.1 | Symbols:  | lipoyltransferase, putative |
           chr1:17484753-17486387 FORWARD
          Length = 416

 Score =  214 bits (544), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 108/186 (58%), Positives = 136/186 (73%), Gaps = 32/186 (17%)

Query: 104 LGTGSSVGYLNFDVKDAPFEVYRTERGGEVTYHGPGQLVMYPIINLRNHEMDLHWYLRAL 163
           +GTGSS  YLNFD+K+APF+VYRTERGGEVTYHGPGQL                      
Sbjct: 1   MGTGSSENYLNFDIKNAPFDVYRTERGGEVTYHGPGQL---------------------- 38

Query: 164 EEVVIRVLASTFSIEASRVEGLTGVWVGDEKVAAIGIKVSQWITYHGLALNVTTDLTPFN 223
           EEVVIRVL+S F+I ASR++G TGVWVG++K+AAIGI+VS+W+TYHGLALNVTTDLTPFN
Sbjct: 39  EEVVIRVLSSAFAINASRLDGFTGVWVGNKKMAAIGIRVSKWMTYHGLALNVTTDLTPFN 98

Query: 224 WIVPCGIRNRKVGSIKGLLLQQIDSCLYENGDD-PEFVDSHLIDTTYKSLVREFSDIFQL 282
            IVPCGIRNR VGS+KGL+         E+G+   +  D  L+D  ++SL++EFS++FQL
Sbjct: 99  SIVPCGIRNRGVGSVKGLI---------EDGEHYNKLEDLQLLDIAHESLLKEFSEVFQL 149

Query: 283 NIYHKT 288
            +  +T
Sbjct: 150 QMEKQT 155


>AT1G04640.2 | Symbols: LIP2 | LIP2 (LIPOYLTRANSFERASE 2);
           lipoyltransferase | chr1:1292541-1293248 FORWARD
          Length = 235

 Score =  132 bits (331), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 74/183 (40%), Positives = 112/183 (61%), Gaps = 14/183 (7%)

Query: 63  VPYGDAWNWQKDIVKEKKAMIERNEEFPDTLIVLQHRPVYTLG---TGSSVGYLNFDVKD 119
           V Y  +   Q+ +V E+KA      + PDTL+ LQH P YTLG   T  ++     ++  
Sbjct: 15  VNYLKSLKLQEKLVSERKA-----HQIPDTLLSLQHPPTYTLGKRRTDHNLLIPESELTK 69

Query: 120 APFEVYRTERGGEVTYHGPGQLVMYPIINLRNHEMDLHWYLRALEEVVIRVLASTFSIEA 179
              E++ T+RGG++T+HGP Q ++YPII+LR+       Y+  LE  +I   AS + ++A
Sbjct: 70  IGAELHYTQRGGDITFHGPHQAILYPIISLRSIGFGARNYVETLERSMIE-FASIYGVKA 128

Query: 180 ---SRVEGLTGVWVGDEKVAAIGIKVSQWITYHGLALNVTTDLTPFNWIVPCGIRNRKVG 236
              ++ E  TGVWVGD K+ AIG+++S  IT HGLALN+  D+  F  IVPCGI +++V 
Sbjct: 129 RAGNKCE--TGVWVGDRKIGAIGVRISSGITSHGLALNIDPDMKYFEHIVPCGIADKEVT 186

Query: 237 SIK 239
           S++
Sbjct: 187 SLR 189


>AT1G04640.1 | Symbols: LIP2 | LIP2 (LIPOYLTRANSFERASE 2);
           lipoyltransferase | chr1:1292541-1293248 FORWARD
          Length = 235

 Score =  132 bits (331), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 74/183 (40%), Positives = 112/183 (61%), Gaps = 14/183 (7%)

Query: 63  VPYGDAWNWQKDIVKEKKAMIERNEEFPDTLIVLQHRPVYTLG---TGSSVGYLNFDVKD 119
           V Y  +   Q+ +V E+KA      + PDTL+ LQH P YTLG   T  ++     ++  
Sbjct: 15  VNYLKSLKLQEKLVSERKA-----HQIPDTLLSLQHPPTYTLGKRRTDHNLLIPESELTK 69

Query: 120 APFEVYRTERGGEVTYHGPGQLVMYPIINLRNHEMDLHWYLRALEEVVIRVLASTFSIEA 179
              E++ T+RGG++T+HGP Q ++YPII+LR+       Y+  LE  +I   AS + ++A
Sbjct: 70  IGAELHYTQRGGDITFHGPHQAILYPIISLRSIGFGARNYVETLERSMIE-FASIYGVKA 128

Query: 180 ---SRVEGLTGVWVGDEKVAAIGIKVSQWITYHGLALNVTTDLTPFNWIVPCGIRNRKVG 236
              ++ E  TGVWVGD K+ AIG+++S  IT HGLALN+  D+  F  IVPCGI +++V 
Sbjct: 129 RAGNKCE--TGVWVGDRKIGAIGVRISSGITSHGLALNIDPDMKYFEHIVPCGIADKEVT 186

Query: 237 SIK 239
           S++
Sbjct: 187 SLR 189