Jatropha Genome Database
- JcCA0313841.20
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0313841.20 + phase: 0
(436 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G03510.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 559 e-159
AT2G20540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 273 2e-73
AT1G20230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 272 3e-73
AT3G49140.1 | Symbols: | EXPRESSED IN: 23 plant structures; EXP... 261 8e-70
AT3G49140.2 | Symbols: | EXPRESSED IN: 22 plant structures; EXP... 260 1e-69
AT5G44230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 256 2e-68
AT3G57430.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 254 7e-68
AT5G59600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 251 9e-67
AT5G08310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 248 7e-66
AT3G46790.1 | Symbols: CRR2 | CRR2 (CHLORORESPIRATORY REDUCTION ... 248 7e-66
AT4G37170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 244 1e-64
AT2G37310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 244 1e-64
AT2G29760.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 243 1e-64
AT4G37380.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 243 1e-64
AT1G33350.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 242 4e-64
AT3G03580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 239 2e-63
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 239 2e-63
AT5G56310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 239 2e-63
AT3G13770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 239 3e-63
AT2G13600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 238 5e-63
AT1G50270.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 238 7e-63
AT4G02750.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 237 1e-62
AT3G01580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 237 1e-62
AT1G28690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 237 1e-62
AT4G21300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 235 4e-62
AT4G21065.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 234 8e-62
AT3G04750.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 234 8e-62
AT2G22410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 233 1e-61
AT1G77170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 233 1e-61
AT1G06140.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 233 2e-61
AT1G11290.1 | Symbols: CRR22 | CRR22 (CHLORORESPIRATORY REDUCTIO... 232 3e-61
AT1G74630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 231 6e-61
AT2G40720.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 230 1e-60
AT4G18750.1 | Symbols: DOT4 | DOT4 (DEFECTIVELY ORGANIZED TRIBUT... 230 2e-60
AT1G03540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 229 2e-60
AT5G37570.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 229 2e-60
AT1G17630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 228 7e-60
AT5G08510.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 228 7e-60
AT3G63370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 228 9e-60
AT5G59200.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 227 9e-60
AT5G15300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 227 9e-60
AT4G14820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 227 1e-59
AT3G49170.1 | Symbols: EMB2261 | EMB2261 (embryo defective 2261)... 227 1e-59
AT1G77010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 227 1e-59
AT3G29230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 226 3e-59
AT2G33760.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 225 4e-59
AT3G15930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 225 5e-59
AT4G16835.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 225 5e-59
AT5G39350.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 224 1e-58
AT5G16860.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 223 1e-58
AT3G53360.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 223 2e-58
AT3G15130.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 222 3e-58
AT3G47530.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 222 3e-58
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 222 4e-58
AT3G14330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 222 4e-58
AT3G02330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 222 4e-58
AT5G06540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 221 5e-58
AT1G56690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 221 5e-58
AT1G13410.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 221 7e-58
AT5G52630.1 | Symbols: MEF1 | MEF1 (MITOCHONDRIAL RNA EDITING FA... 221 8e-58
AT1G31430.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 221 9e-58
AT1G05750.1 | Symbols: PDE247, CLB19 | PDE247 (pigment defective... 221 1e-57
AT2G21090.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 220 1e-57
AT1G25360.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 220 2e-57
AT5G66520.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 220 2e-57
AT4G30700.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 219 2e-57
AT1G19720.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 219 2e-57
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 219 2e-57
AT3G12770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 219 3e-57
AT1G56570.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 219 4e-57
AT5G40405.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 219 4e-57
AT1G09190.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 218 4e-57
AT5G40410.1 | Symbols: | INVOLVED IN: biological_process unknow... 218 5e-57
AT1G53600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 218 5e-57
AT2G37320.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 218 6e-57
AT2G27610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 218 7e-57
AT4G14170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 217 1e-56
AT5G48910.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 217 1e-56
AT4G14850.1 | Symbols: LOI1 | LOI1 (lovastatin insensitive 1) | ... 216 3e-56
AT3G24000.1 | Symbols: | INVOLVED IN: biological_process unknow... 216 3e-56
AT3G14730.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 216 3e-56
AT4G14050.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 215 4e-56
AT4G16470.1 | Symbols: | INVOLVED IN: biological_process unknow... 214 6e-56
AT2G33680.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 214 1e-55
AT3G23330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 214 1e-55
AT2G41080.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 214 1e-55
AT1G08070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 213 2e-55
AT5G13270.1 | Symbols: RARE1 | pentatricopeptide (PPR) repeat-co... 213 2e-55
AT4G25270.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 213 2e-55
AT3G20730.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 213 3e-55
AT4G21065.2 | Symbols: | FUNCTIONS IN: molecular_function unkno... 212 5e-55
AT1G71490.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 211 5e-55
AT3G22150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 211 6e-55
AT3G22690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 211 1e-54
AT3G11460.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 210 1e-54
AT2G03880.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 210 1e-54
AT5G27110.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 210 1e-54
AT4G19191.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 210 2e-54
AT5G55740.1 | Symbols: CRR21 | CRR21 (chlororespiratory reductio... 210 2e-54
AT1G62260.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 210 2e-54
AT2G02750.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 210 2e-54
AT4G33170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 209 2e-54
AT5G04780.1 | Symbols: | INVOLVED IN: biological_process unknow... 209 4e-54
AT3G49710.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 209 4e-54
AT2G01510.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 209 4e-54
AT5G08490.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 208 5e-54
AT3G05340.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 208 6e-54
AT4G13650.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 208 6e-54
AT4G31070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 207 8e-54
AT2G03380.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 207 8e-54
AT1G09220.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 207 9e-54
AT5G09950.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 207 9e-54
AT3G09040.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 207 1e-53
AT1G06145.1 | Symbols: EMB1444 | EMB1444 (EMBRYO DEFECTIVE 1444)... 207 1e-53
AT1G04840.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 206 2e-53
AT4G18840.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 206 2e-53
AT3G26782.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED I... 206 2e-53
AT5G50390.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 206 3e-53
AT4G35130.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 206 3e-53
AT4G33990.1 | Symbols: EMB2758 | EMB2758 (embryo defective 2758)... 206 3e-53
AT4G15720.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 205 4e-53
AT5G13230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 205 4e-53
AT2G42920.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 205 6e-53
AT5G15340.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 204 1e-52
AT1G15510.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 204 1e-52
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 204 1e-52
AT2G02980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 203 2e-52
AT1G31920.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 202 2e-52
AT1G59720.1 | Symbols: CRR28 | CRR28 (CHLORORESPIRATORY REDUCTIO... 202 3e-52
AT2G35030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 202 5e-52
AT5G43790.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 201 6e-52
AT1G74400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 201 8e-52
AT3G56550.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 201 1e-51
AT3G13880.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 201 1e-51
AT5G50990.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 200 1e-51
AT1G18485.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 200 2e-51
AT5G61800.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 199 2e-51
AT3G62890.1 | Symbols: | binding | chr3:23246168-23247973 FORWARD 199 3e-51
AT1G10330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 198 6e-51
AT4G39952.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 197 1e-50
AT3G49740.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 196 2e-50
AT1G26900.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 196 3e-50
AT2G34400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 196 3e-50
AT4G39530.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 195 6e-50
AT3G28660.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 194 6e-50
AT1G34160.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 194 7e-50
AT5G46460.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 194 1e-49
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 194 1e-49
AT4G19220.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 192 3e-49
AT3G02010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 192 3e-49
AT4G20770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 192 3e-49
AT3G28640.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 192 4e-49
AT4G04370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 192 4e-49
AT5G19020.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 192 4e-49
AT3G05240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 191 6e-49
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 190 1e-48
AT1G71420.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 190 1e-48
AT2G04860.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 189 2e-48
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 189 3e-48
AT5G66500.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 189 3e-48
AT2G46050.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 188 5e-48
AT2G44880.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 188 6e-48
AT1G69350.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 188 6e-48
AT2G36980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 188 7e-48
AT4G08210.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 188 7e-48
AT3G08820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 188 7e-48
AT3G25970.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 186 3e-47
AT3G47840.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 185 5e-47
AT4G32430.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 184 7e-47
AT2G45350.1 | Symbols: CRR4 | CRR4 (CHLORORESPIRATORY REDUCTION ... 180 1e-45
AT5G39680.1 | Symbols: EMB2744 | EMB2744 (EMBRYO DEFECTIVE 2744)... 180 1e-45
AT5G65570.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 180 1e-45
AT5G42450.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 180 2e-45
AT3G21470.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 179 5e-45
AT3G25060.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 178 5e-45
AT3G18970.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 176 2e-44
AT3G26630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 174 1e-43
AT4G38010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 173 2e-43
AT2G17210.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 173 2e-43
AT3G61170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 172 3e-43
AT2G39620.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 171 1e-42
AT5G47460.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 170 1e-42
AT4G22760.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 170 2e-42
AT1G16480.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 169 2e-42
AT3G18840.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 169 4e-42
AT3G51320.1 | Symbols: | INVOLVED IN: biological_process unknow... 166 4e-41
AT1G43980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 165 7e-41
AT1G64310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 164 8e-41
AT5G52850.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 162 4e-40
AT3G50420.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 160 2e-39
AT3G58590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 159 3e-39
AT1G14470.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 157 1e-38
AT2G36730.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 155 5e-38
AT1G71460.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 152 5e-37
AT1G22830.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 150 1e-36
AT1G22830.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 150 1e-36
AT3G26540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 144 1e-34
AT1G23450.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 143 2e-34
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | EMB175 (EMBRYO ... 142 4e-34
AT4G18520.1 | Symbols: | INVOLVED IN: biological_process unknow... 124 1e-28
AT2G15690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 117 1e-26
AT2G25580.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 102 3e-22
AT3G18110.1 | Symbols: EMB1270 | EMB1270 (embryo defective 1270)... 97 1e-20
AT2G34370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 91 2e-18
AT5G41170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 7e-18
AT2G31400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 88 1e-17
AT4G32450.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 2e-17
AT1G29710.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 86 4e-17
AT2G18940.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 2e-16
AT1G62680.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:... 84 2e-16
AT5G02860.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 83 3e-16
AT1G09680.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 83 3e-16
AT5G16640.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 83 4e-16
AT2G01740.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 6e-16
AT1G31840.1 | Symbols: | LOCATED IN: endomembrane system; EXPRE... 82 7e-16
AT1G63330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 8e-16
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 81 1e-15
AT1G62720.1 | Symbols: | INVOLVED IN: biological_process unknow... 80 2e-15
AT1G74850.1 | Symbols: PTAC2 | PTAC2 (PLASTID TRANSCRIPTIONALLY ... 80 3e-15
AT1G62930.1 | Symbols: | INVOLVED IN: biological_process unknow... 79 7e-15
AT1G05670.2 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transfer... 79 7e-15
AT1G05670.1 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transfer... 79 7e-15
AT1G73710.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 8e-15
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 78 1e-14
AT5G64320.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 78 1e-14
AT3G23020.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 78 1e-14
AT1G62670.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 3e-14
AT3G13160.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 76 4e-14
AT5G65560.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 76 5e-14
AT5G42310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 6e-14
AT4G31850.1 | Symbols: PGR3 | PGR3 (PROTON GRADIENT REGULATION 3... 74 1e-13
AT1G63150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 1e-13
AT1G03560.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 2e-13
AT1G63080.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 2e-13
AT1G12300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 2e-13
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 73 5e-13
AT3G16710.1 | Symbols: | INVOLVED IN: biological_process unknow... 72 8e-13
AT1G62910.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 8e-13
AT1G12700.1 | Symbols: | helicase domain-containing protein / p... 71 1e-12
AT5G61400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 71 1e-12
AT5G14770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 71 1e-12
AT4G11690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 71 2e-12
AT2G41720.2 | Symbols: EMB2654 | EMB2654 (EMBRYO DEFECTIVE 2654)... 71 2e-12
AT3G13150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 2e-12
AT3G04760.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 2e-12
AT2G41720.1 | Symbols: EMB2654 | EMB2654 (EMBRYO DEFECTIVE 2654)... 70 2e-12
AT1G64580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 2e-12
AT1G18900.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 2e-12
AT1G18900.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 2e-12
AT1G09900.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 2e-12
AT5G61990.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 4e-12
AT1G63130.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 4e-12
AT3G53700.1 | Symbols: MEE40 | MEE40 (maternal effect embryo arr... 69 6e-12
AT1G74750.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 68 1e-11
AT4G16390.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:... 68 1e-11
AT1G12620.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 2e-11
AT1G63230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 3e-11
AT4G39620.1 | Symbols: EMB2453 | EMB2453 (embryo defective 2453)... 67 3e-11
AT3G59040.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 3e-11
AT3G59040.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 66 4e-11
AT2G17670.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 66 4e-11
AT1G12775.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED I... 66 5e-11
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 66 5e-11
AT3G16010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 7e-11
AT3G48810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 1e-10
AT1G63400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 2e-10
AT5G59900.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 2e-10
AT1G20300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 2e-10
AT3G22670.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 3e-10
AT2G35130.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 63 3e-10
AT1G10910.1 | Symbols: | INVOLVED IN: biological_process unknow... 63 4e-10
AT2G16880.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 63 4e-10
AT3G07290.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 63 5e-10
AT4G20090.1 | Symbols: EMB1025 | EMB1025 (embryo defective 1025)... 62 5e-10
AT3G06920.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 6e-10
AT3G22470.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 6e-10
AT3G60050.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 1e-09
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 1e-09
AT2G17140.1 | Symbols: | EXPRESSED IN: 7 plant structures; EXPR... 61 1e-09
AT5G28460.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 1e-09
AT5G28370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 1e-09
AT4G19440.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 1e-09
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 1e-09
AT1G55890.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 2e-09
AT5G55840.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 2e-09
AT1G09820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 2e-09
AT5G15010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 2e-09
AT1G06710.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 2e-09
AT4G19900.1 | Symbols: | glycosyl transferase-related | chr4:10... 60 3e-09
AT1G55630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 3e-09
AT1G79540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 3e-09
AT3G61520.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 4e-09
AT4G01570.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 4e-09
AT5G48730.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 4e-09
AT2G02150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 5e-09
AT1G31790.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 5e-09
AT2G06000.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 5e-09
AT2G06000.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 5e-09
AT4G04790.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 59 5e-09
AT2G32630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 6e-09
AT5G46100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 6e-09
AT1G74580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 6e-09
AT5G50280.1 | Symbols: EMB1006 | EMB1006 (embryo defective 1006)... 59 6e-09
AT1G63630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 7e-09
AT1G77360.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 7e-09
AT4G28010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 8e-09
AT3G04130.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 1e-08
AT3G04130.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 1e-08
AT1G11710.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 1e-08
AT5G01110.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 1e-08
AT5G46680.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 1e-08
AT4G26800.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 2e-08
AT3G53170.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 57 2e-08
AT1G53330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 2e-08
AT1G30290.1 | Symbols: | unknown protein | chr1:10670320-106727... 57 3e-08
AT1G06580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 3e-08
AT5G13770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 3e-08
AT5G39980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 4e-08
AT5G39710.1 | Symbols: EMB2745 | EMB2745 (EMBRYO DEFECTIVE 2745)... 56 4e-08
AT1G74900.1 | Symbols: OTP43 | OTP43 (organelle transcript proce... 56 5e-08
AT4G34830.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:... 56 5e-08
AT2G37230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 6e-08
AT2G19280.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 6e-08
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 7e-08
AT1G52620.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 7e-08
AT1G51965.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 7e-08
AT1G13040.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 8e-08
AT1G79490.1 | Symbols: EMB2217 | EMB2217 (embryo defective 2217)... 55 8e-08
AT1G77150.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 54 2e-07
AT5G57250.1 | Symbols: | EXPRESSED IN: 9 plant structures; EXPR... 54 2e-07
AT5G18950.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 2e-07
AT1G02060.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 3e-07
AT3G62470.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 3e-07
AT1G52640.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 4e-07
AT1G19290.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED I... 53 5e-07
AT2G17525.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 5e-07
AT3G54980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 5e-07
AT2G26790.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 6e-07
AT5G14820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 8e-07
AT3G62540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 8e-07
AT3G29290.1 | Symbols: emb2076 | emb2076 (embryo defective 2076)... 52 8e-07
AT5G38730.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 9e-07
AT3G16890.1 | Symbols: PPR40 | PPR40 (PENTATRICOPEPTIDE (PPR) DO... 51 1e-06
AT3G46610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 2e-06
AT5G40400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 51 2e-06
AT3G49730.1 | Symbols: | EXPRESSED IN: 19 plant structures; EXP... 50 2e-06
AT5G65820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 2e-06
AT1G71060.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 2e-06
AT2G15630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 2e-06
AT2G18520.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 4e-06
AT5G03560.2 | Symbols: | nucleobase:cation symporter | chr5:901... 50 4e-06
AT4G30825.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 5e-06
>AT1G03510.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:876258-877547 REVERSE
Length = 429
Score = 559 bits (1441), Expect = e-159, Method: Compositional matrix adjust.
Identities = 269/421 (63%), Positives = 320/421 (76%)
Query: 14 SYSSNYLRLISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHR 73
SY+S+ +LIS TKQL+S+ QG H+QAL +F + +S AL LD +V SL LKSC+A R
Sbjct: 4 SYASSCTKLISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFR 63
Query: 74 SQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISL 133
LG ++H+HS+K FLSNPFV CAL+DMYGKC+S ARKLFDEIPQRN VVWNAMIS
Sbjct: 64 PVLGGSVHAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISH 123
Query: 134 YTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLI 193
YTH V +A+ +++AM V P+ S+FNAII GL GTEDGS +AI FY +M E KPNLI
Sbjct: 124 YTHCGKVKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLI 183
Query: 194 TLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNM 253
TLLAL+ AC + + +IKEIH + RN I+PHPQL+SGLVEAYGRCG ++ VF +M
Sbjct: 184 TLLALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSM 243
Query: 254 KERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDAL 313
++RDVVAWSSLISAYALHG+A SAL+TF ME+AKV PDDI FL VLKACSHAGLAD+AL
Sbjct: 244 EDRDVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEAL 303
Query: 314 DYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRT 373
YF RMQ DYGL+ S DHYSCLVDVLSR GR EAY +I+ MP K T K WGALLGACR
Sbjct: 304 VYFKRMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRN 363
Query: 374 YGEVELAEIAGRALFEIEPDNPANYVLLARIYASMGRHGEAXXXXXXXXXXGVKVAPGGS 433
YGE+ELAEIA R L +EP+NPANYVLL +IY S+GR EA GVKV+PG S
Sbjct: 364 YGEIELAEIAARELLMVEPENPANYVLLGKIYMSVGRQEEAERLRLKMKESGVKVSPGSS 423
Query: 434 W 434
W
Sbjct: 424 W 424
>AT2G20540.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:8844160-8845764 FORWARD
Length = 534
Score = 273 bits (697), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 141/381 (37%), Positives = 224/381 (58%), Gaps = 6/381 (1%)
Query: 57 DPYVLSLVLKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLF 116
D + + KSC+++ LG +H H K G + AL+DMY K A K+F
Sbjct: 108 DRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVF 167
Query: 117 DEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDAS--TFNAIIAGLAGTEDGSA 174
DE+ +R+V+ WN+++S Y + A +F H+ D + ++ A+I+G G
Sbjct: 168 DEMYERDVISWNSLLSGYARLGQMKKAKGLF---HLMLDKTIVSWTAMISGYTGI-GCYV 223
Query: 175 KAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLV 234
+A+ F+ M+ ++P+ I+L+++L +C ++ SL + K IH + R + + L+
Sbjct: 224 EAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALI 283
Query: 235 EAYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDI 294
E Y +CG + A +F M+ +DV++WS++IS YA HG A A+ETF+ M+ AKV P+ I
Sbjct: 284 EMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGI 343
Query: 295 TFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRG 354
TFL +L ACSH G+ + L YF M+QDY ++P +HY CL+DVL+RAG+L A +I +
Sbjct: 344 TFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKT 403
Query: 355 MPVKVTVKAWGALLGACRTYGEVELAEIAGRALFEIEPDNPANYVLLARIYASMGRHGEA 414
MP+K K WG+LL +CRT G +++A +A L E+EP++ NYVLLA IYA +G+ +
Sbjct: 404 MPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDV 463
Query: 415 XXXXXXXXXXGVKVAPGGSWV 435
+K PGGS +
Sbjct: 464 SRLRKMIRNENMKKTPGGSLI 484
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 74/369 (20%), Positives = 151/369 (40%), Gaps = 79/369 (21%)
Query: 55 SLDPYVLSLVLKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARK 114
++ Y + + + S ++ A+I H G + F+ +VD K A +
Sbjct: 8 EVENYFIPFLQRVKSRNEWKKINASIIIH----GLSQSSFMVTKMVDFCDKIEDMDYATR 63
Query: 115 LFDEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSA 174
LF+++ NV ++N++I YTH++ D + ++ +
Sbjct: 64 LFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQL------------------------ 99
Query: 175 KAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLV 234
+R+ P+ T + ++C + S + K++HG + H + L+
Sbjct: 100 --------LRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALI 151
Query: 235 EAYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFH------------ 282
+ Y + L++A VF M ERDV++W+SL+S YA G+ + A FH
Sbjct: 152 DMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTA 211
Query: 283 -------------------HMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQDY 323
M++A + PD+I+ ++VL +C+ G + + +
Sbjct: 212 MISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELG-KWIHLYAERR 270
Query: 324 GLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALL----------GACRT 373
G + + L+++ S+ G + +A + M K V +W ++ GA T
Sbjct: 271 GFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGK-DVISWSTMISGYAYHGNAHGAIET 329
Query: 374 YGEVELAEI 382
+ E++ A++
Sbjct: 330 FNEMQRAKV 338
>AT1G20230.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:7009570-7011852 FORWARD
Length = 760
Score = 272 bits (696), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 147/430 (34%), Positives = 235/430 (54%), Gaps = 7/430 (1%)
Query: 10 LRIMSYSSNYLRLISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCS 69
L M S ++SW L+ + G+H++A+V+F I L D +S VL S
Sbjct: 205 LSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIH-HLGFCPDQVTVSSVLPSVG 263
Query: 70 AIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNA 129
+G IH + IK G L + V A++DMYGK + LF++ V NA
Sbjct: 264 DSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNA 323
Query: 130 MISLYTHSNCVSDALYMFDAMH---VAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMREL 186
I+ + + V AL MF+ + + ++ +IIAG A +A+ + M+
Sbjct: 324 YITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCA-QNGKDIEALELFREMQVA 382
Query: 187 SLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINA 246
+KPN +T+ ++L AC + +L + HG ++R H+ + + S L++ Y +CG IN
Sbjct: 383 GVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCG-RINL 441
Query: 247 SNVFYNM-KERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSH 305
S + +NM +++V W+SL++ +++HG+A+ + F + ++ PD I+F ++L AC
Sbjct: 442 SQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQ 501
Query: 306 AGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWG 365
GL D+ YF M ++YG++P +HYSC+V++L RAG+L EAYD+I+ MP + WG
Sbjct: 502 VGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWG 561
Query: 366 ALLGACRTYGEVELAEIAGRALFEIEPDNPANYVLLARIYASMGRHGEAXXXXXXXXXXG 425
ALL +CR V+LAEIA LF +EP+NP YVLL+ IYA+ G E G
Sbjct: 562 ALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLG 621
Query: 426 VKVAPGGSWV 435
+K PG SW+
Sbjct: 622 LKKNPGCSWI 631
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 93/397 (23%), Positives = 178/397 (44%), Gaps = 50/397 (12%)
Query: 24 SWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIHSH 83
S++ + + K Q++ VF+ + S L D +VL + K C+ + ++G IH
Sbjct: 83 SFSSLIYALTKAKLFTQSIGVFSRM-FSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCV 141
Query: 84 SIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSDA 143
S G + FV ++ MY +C ARK+FD + ++VV +A++ Y C+ +
Sbjct: 142 SCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEV 201
Query: 144 LYMFDAMH---VAPDASTFNAIIAGLAGTEDGSAK-AIAFYWRMRELSLKPNLITLLALL 199
+ + M + + ++N I++G G K A+ + ++ L P+ +T+ ++L
Sbjct: 202 VRILSEMESSGIEANIVSWNGILSGF--NRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVL 259
Query: 200 RACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCG---CLINASNVFYNMK-- 254
+ LNM + IHG I+ + + S +++ YG+ G +I+ N F M+
Sbjct: 260 PSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAG 319
Query: 255 ------------------------------ERDVVAWSSLISAYALHGEARSALETFHHM 284
E +VV+W+S+I+ A +G+ ALE F M
Sbjct: 320 VCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREM 379
Query: 285 EMAKVLPDDITFLAVLKACSHA---GLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSR 341
++A V P+ +T ++L AC + G + R+ L + S L+D+ ++
Sbjct: 380 QVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVH----LLDNVHVGSALIDMYAK 435
Query: 342 AGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVE 378
GR+ + + MP K V W +L+ +G+ +
Sbjct: 436 CGRINLSQIVFNMMPTKNLV-CWNSLMNGFSMHGKAK 471
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 115/242 (47%), Gaps = 12/242 (4%)
Query: 121 QRNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDAS--TFNAIIAGLAGTEDGSAKAIA 178
Q + + +I+ Y++ NC +DA + ++ PD + +F+++I L + + ++I
Sbjct: 47 QNDGYISAKLIASYSNYNCFNDADLVLQSI---PDPTIYSFSSLIYALTKAKLFT-QSIG 102
Query: 179 FYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYG 238
+ RM L P+ L L + C +++ + K+IH S + +D ++ + Y
Sbjct: 103 VFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYM 162
Query: 239 RCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLA 298
RCG + +A VF M ++DVV S+L+ AYA G + ME + + + +++
Sbjct: 163 RCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNG 222
Query: 299 VLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRA-----GRLYEAYDIIR 353
+L + +G +A+ F ++ G P S ++ + + GRL Y I +
Sbjct: 223 ILSGFNRSGYHKEAVVMFQKIHH-LGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQ 281
Query: 354 GM 355
G+
Sbjct: 282 GL 283
>AT3G49140.1 | Symbols: | EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885);
BEST Arabidopsis thaliana protein match is: EMB2758
(embryo defective 2758) (TAIR:AT4G33990.1); Has 45368
Blast hits to 16108 proteins in 635 species: Archae -
60; Bacteria - 10333; Metazoa - 8211; Fungi - 3499;
Plants - 14806; Viruses - 492; Other Eukaryotes - 7967
(source: NCBI BLink). | chr3:18212187-18217848 REVERSE
Length = 1215
Score = 261 bits (666), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 143/442 (32%), Positives = 229/442 (51%), Gaps = 36/442 (8%)
Query: 29 LNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIHSHSIKMG 88
+ S+V GF+ + + VF + + D Y VLK+CS +G IH + K+G
Sbjct: 112 IRSYVNNGFYGEGVKVFGTM-CGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVG 170
Query: 89 FLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSDALYM-- 146
S FV LV MYGKC AR + DE+ +R+VV WN+++ Y + DAL +
Sbjct: 171 LSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCR 230
Query: 147 -FDAMHVAPDASTFNAIIAGLAGTEDGSA------------------------------- 174
+++ ++ DA T +++ ++ T +
Sbjct: 231 EMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMP 290
Query: 175 -KAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGL 233
+A+ Y RM +P+ +++ ++L AC ++L++ K+IHG R + P+ L + L
Sbjct: 291 VEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENAL 350
Query: 234 VEAYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDD 293
++ Y +CGCL A +VF NMK RDVV+W+++ISAY G A+ F ++ + ++PD
Sbjct: 351 IDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDS 410
Query: 294 ITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIR 353
I F+ L ACSHAGL ++ F M Y + P +H +C+VD+L RAG++ EAY I+
Sbjct: 411 IAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQ 470
Query: 354 GMPVKVTVKAWGALLGACRTYGEVELAEIAGRALFEIEPDNPANYVLLARIYASMGRHGE 413
M ++ + WGALLGACR + + ++ +A LF++ P+ YVLL+ IYA GR E
Sbjct: 471 DMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEE 530
Query: 414 AXXXXXXXXXXGVKVAPGGSWV 435
G+K PG S V
Sbjct: 531 VTNIRNIMKSKGLKKNPGASNV 552
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 100/231 (43%), Gaps = 39/231 (16%)
Query: 79 AIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSN 138
+HS I N + L+ Y SARK+FDEIP+RNV++ N MI Y ++
Sbjct: 60 TVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNG 119
Query: 139 CVSDALYMFDAM---HVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITL 195
+ + +F M +V PD TF +
Sbjct: 120 FYGEGVKVFGTMCGCNVRPDHYTFPCV--------------------------------- 146
Query: 196 LALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKE 255
L+AC ++ + ++IHG + + + + +GLV YG+CG L A V M
Sbjct: 147 ---LKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSR 203
Query: 256 RDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHA 306
RDVV+W+SL+ YA + ALE ME K+ D T ++L A S+
Sbjct: 204 RDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNT 254
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 80/350 (22%), Positives = 134/350 (38%), Gaps = 79/350 (22%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
L+SW + ++K +A+ +++ ++ D ++ VL +C LG IH
Sbjct: 274 LVSWNVMIGVYMKNAMPVEAVELYSRMEAD-GFEPDAVSITSVLPACGDTSALSLGKKIH 332
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVS 141
+ + + N + AL+DMY KC AR +F+ + R+VV W AMIS Y
Sbjct: 333 GYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAY------- 385
Query: 142 DALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRA 201
G +G A+A + ++++ L P+ I + L A
Sbjct: 386 -----------------------GFSGR---GCDAVALFSKLQDSGLVPDSIAFVTTLAA 419
Query: 202 CVRMTSLNMIKEIHGCS--IRNHIDPHPQLR--SGLVEAYGRCGCLINASNVFYNMK-ER 256
C + +++E C + +H P+L + +V+ GR G + A +M E
Sbjct: 420 C---SHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEP 476
Query: 257 DVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYF 316
+ W +L+ A +H + DI LA D L
Sbjct: 477 NERVWGALLGACRVHSDT------------------DIGLLAA-----------DKLFQL 507
Query: 317 ARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGA 366
A Q Y Y L ++ ++AGR E +I M K K GA
Sbjct: 508 APEQSGY--------YVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGA 549
>AT3G49140.2 | Symbols: | EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885);
BEST Arabidopsis thaliana protein match is: EMB2758
(embryo defective 2758) (TAIR:AT4G33990.1). |
chr3:18213981-18217848 REVERSE
Length = 896
Score = 260 bits (665), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 143/442 (32%), Positives = 229/442 (51%), Gaps = 36/442 (8%)
Query: 29 LNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIHSHSIKMG 88
+ S+V GF+ + + VF + + D Y VLK+CS +G IH + K+G
Sbjct: 112 IRSYVNNGFYGEGVKVFGTM-CGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVG 170
Query: 89 FLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSDALYM-- 146
S FV LV MYGKC AR + DE+ +R+VV WN+++ Y + DAL +
Sbjct: 171 LSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCR 230
Query: 147 -FDAMHVAPDASTFNAIIAGLAGTEDGSA------------------------------- 174
+++ ++ DA T +++ ++ T +
Sbjct: 231 EMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMP 290
Query: 175 -KAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGL 233
+A+ Y RM +P+ +++ ++L AC ++L++ K+IHG R + P+ L + L
Sbjct: 291 VEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENAL 350
Query: 234 VEAYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDD 293
++ Y +CGCL A +VF NMK RDVV+W+++ISAY G A+ F ++ + ++PD
Sbjct: 351 IDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDS 410
Query: 294 ITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIR 353
I F+ L ACSHAGL ++ F M Y + P +H +C+VD+L RAG++ EAY I+
Sbjct: 411 IAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQ 470
Query: 354 GMPVKVTVKAWGALLGACRTYGEVELAEIAGRALFEIEPDNPANYVLLARIYASMGRHGE 413
M ++ + WGALLGACR + + ++ +A LF++ P+ YVLL+ IYA GR E
Sbjct: 471 DMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEE 530
Query: 414 AXXXXXXXXXXGVKVAPGGSWV 435
G+K PG S V
Sbjct: 531 VTNIRNIMKSKGLKKNPGASNV 552
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 100/231 (43%), Gaps = 39/231 (16%)
Query: 79 AIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSN 138
+HS I N + L+ Y SARK+FDEIP+RNV++ N MI Y ++
Sbjct: 60 TVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNG 119
Query: 139 CVSDALYMFDAM---HVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITL 195
+ + +F M +V PD TF +
Sbjct: 120 FYGEGVKVFGTMCGCNVRPDHYTFPCV--------------------------------- 146
Query: 196 LALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKE 255
L+AC ++ + ++IHG + + + + +GLV YG+CG L A V M
Sbjct: 147 ---LKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSR 203
Query: 256 RDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHA 306
RDVV+W+SL+ YA + ALE ME K+ D T ++L A S+
Sbjct: 204 RDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNT 254
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 80/350 (22%), Positives = 134/350 (38%), Gaps = 79/350 (22%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
L+SW + ++K +A+ +++ ++ D ++ VL +C LG IH
Sbjct: 274 LVSWNVMIGVYMKNAMPVEAVELYSRMEAD-GFEPDAVSITSVLPACGDTSALSLGKKIH 332
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVS 141
+ + + N + AL+DMY KC AR +F+ + R+VV W AMIS Y
Sbjct: 333 GYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAY------- 385
Query: 142 DALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRA 201
G +G A+A + ++++ L P+ I + L A
Sbjct: 386 -----------------------GFSGR---GCDAVALFSKLQDSGLVPDSIAFVTTLAA 419
Query: 202 CVRMTSLNMIKEIHGCS--IRNHIDPHPQLR--SGLVEAYGRCGCLINASNVFYNMK-ER 256
C + +++E C + +H P+L + +V+ GR G + A +M E
Sbjct: 420 C---SHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEP 476
Query: 257 DVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYF 316
+ W +L+ A +H + DI LA D L
Sbjct: 477 NERVWGALLGACRVHSDT------------------DIGLLAA-----------DKLFQL 507
Query: 317 ARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGA 366
A Q Y Y L ++ ++AGR E +I M K K GA
Sbjct: 508 APEQSGY--------YVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGA 549
>AT5G44230.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:17814336-17816309 FORWARD
Length = 657
Score = 256 bits (655), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 135/414 (32%), Positives = 224/414 (54%), Gaps = 6/414 (1%)
Query: 25 WTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIHSHS 84
WT + + +G +A+ ++ ++ ++ + S +LK+C + LG H+ +
Sbjct: 117 WTAVIRGYAIEGKFDEAIAMYGCMRKE-EITPVSFTFSALLKACGTMKDLNLGRQFHAQT 175
Query: 85 IKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSDAL 144
++ +V ++DMY KC S ARK+FDE+P+R+V+ W +I+ Y + A
Sbjct: 176 FRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAA 235
Query: 145 YMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRACVR 204
+F+++ D + A++ G A +A+ ++ RM + ++ + +T+ + AC +
Sbjct: 236 ELFESLPTK-DMVAWTAMVTGFAQNAK-PQEALEYFDRMEKSGIRADEVTVAGYISACAQ 293
Query: 205 MTSLNMIKEIHGCSIRNHIDP--HPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWS 262
+ + + ++ P H + S L++ Y +CG + A NVF +M ++V +S
Sbjct: 294 LGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYS 353
Query: 263 SLISAYALHGEARSALETFHHM-EMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQ 321
S+I A HG A+ AL FH+M ++ P+ +TF+ L ACSH+GL D F M Q
Sbjct: 354 SMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQ 413
Query: 322 DYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVELAE 381
+G+QP+ DHY+C+VD+L R GRL EA ++I+ M V+ WGALLGACR + E+AE
Sbjct: 414 TFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEIAE 473
Query: 382 IAGRALFEIEPDNPANYVLLARIYASMGRHGEAXXXXXXXXXXGVKVAPGGSWV 435
IA LFE+EPD NY+LL+ +YAS G G G+K P SWV
Sbjct: 474 IAAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWV 527
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 99/214 (46%), Gaps = 17/214 (7%)
Query: 185 ELSLKPNLI--TLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGC 242
E+S + L+ +L++ L C+ +LN IK+IHG +R +D + + L+ + G
Sbjct: 40 EISNQKELLVSSLISKLDDCI---NLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGV 96
Query: 243 LIN--ASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVL 300
++ A V ++ R+ W+++I YA+ G+ A+ + M ++ P TF A+L
Sbjct: 97 PMDPYARRVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALL 156
Query: 301 KACSHAGLADDALDYFARMQQDYGLQPSSDHY--SCLVDVLSRAGRLYEAYDIIRGMPVK 358
KAC + + A Q + L+ Y + ++D+ + + A + MP +
Sbjct: 157 KACGTMKDLNLGRQFHA---QTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPER 213
Query: 359 VTVKAWGALLGACRTYGEVELAEIAGRALFEIEP 392
V +W L+ A G +E A LFE P
Sbjct: 214 -DVISWTELIAAYARVGNMECAA----ELFESLP 242
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/268 (20%), Positives = 107/268 (39%), Gaps = 39/268 (14%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
+++WT + + Q+AL F+ ++ S + D ++ + +C+ + S+
Sbjct: 246 MVAWTAMVTGFAQNAKPQEALEYFDRMEKS-GIRADEVTVAGYISACAQLGASKYADRAV 304
Query: 82 SHSIKMGFLSNPFV--ACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMI-SLYTHSN 138
+ K G+ + V AL+DMY KC + A +F + +NV +++MI L TH
Sbjct: 305 QIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGR 364
Query: 139 CVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLAL 198
+A+H+ F++ + + +KPN +T +
Sbjct: 365 AQ-------EALHL--------------------------FHYMVTQTEIKPNTVTFVGA 391
Query: 199 LRACVRMTSLNMIKEIHGCSIRNH-IDPHPQLRSGLVEAYGRCGCLINASNVFYNMK-ER 256
L AC ++ +++ + + P + +V+ GR G L A + M E
Sbjct: 392 LMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEP 451
Query: 257 DVVAWSSLISAYALHGEARSALETFHHM 284
W +L+ A +H A H+
Sbjct: 452 HGGVWGALLGACRIHNNPEIAEIAAEHL 479
>AT3G57430.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:21255731-21258403 REVERSE
Length = 890
Score = 254 bits (649), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 144/439 (32%), Positives = 235/439 (53%), Gaps = 28/439 (6%)
Query: 1 MFCEAK--LNQLRIMSYSSNYLRLIS-WTKQLNSHVKQGFHQQALVVFNHIQTSLALSLD 57
M+C K L+ R+ + + R I W + + + ++AL++F ++ S L +
Sbjct: 347 MYCNCKQVLSGRRV--FDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLAN 404
Query: 58 PYVLSLVLKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFD 117
++ V+ +C AIH +K G + FV L+DMY + A ++F
Sbjct: 405 STTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFG 464
Query: 118 EIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAI 177
++ R++V WN MI+ Y S DAL + M E +K
Sbjct: 465 KMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQ----------------NLERKVSKGA 508
Query: 178 AFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAY 237
+ +SLKPN ITL+ +L +C +++L KEIH +I+N++ + S LV+ Y
Sbjct: 509 S------RVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMY 562
Query: 238 GRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFL 297
+CGCL + VF + +++V+ W+ +I AY +HG + A++ M + V P+++TF+
Sbjct: 563 AKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFI 622
Query: 298 AVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPV 357
+V ACSH+G+ D+ L F M+ DYG++PSSDHY+C+VD+L RAGR+ EAY ++ MP
Sbjct: 623 SVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPR 682
Query: 358 KVT-VKAWGALLGACRTYGEVELAEIAGRALFEIEPDNPANYVLLARIYASMGRHGEAXX 416
AW +LLGA R + +E+ EIA + L ++EP+ ++YVLLA IY+S G +A
Sbjct: 683 DFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATE 742
Query: 417 XXXXXXXXGVKVAPGGSWV 435
GV+ PG SW+
Sbjct: 743 VRRNMKEQGVRKEPGCSWI 761
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/391 (24%), Positives = 176/391 (45%), Gaps = 63/391 (16%)
Query: 5 AKLNQLRIMSYSSNYLRLISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDP--YVLS 62
KL +++ S L++W L+S + ++Q L +++ + ++P + +S
Sbjct: 250 GKLASSKVLLGSFGGRDLVTWNTVLSSLCQ---NEQLLEALEYLREMVLEGVEPDEFTIS 306
Query: 63 LVLKSCSAIHRSQLGAAIHSHSIKMGFL-SNPFVACALVDMYGKCVSTFSARKLFDEIPQ 121
VL +CS + + G +H++++K G L N FV ALVDMY C S R++FD +
Sbjct: 307 SVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFD 366
Query: 122 RNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYW 181
R + +WNAMI+ Y+ + +AL +F M + AGL
Sbjct: 367 RKIGLWNAMIAGYSQNEHDKEALLLFIGMEES----------AGLLA------------- 403
Query: 182 RMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCG 241
N T+ ++ ACVR + + + IHG ++ +D +++ L++ Y R G
Sbjct: 404 ---------NSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLG 454
Query: 242 CLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHME-----------MAKVL 290
+ A +F M++RD+V W+++I+ Y AL H M+ +
Sbjct: 455 KIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLK 514
Query: 291 PDDITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHY------SCLVDVLSRAGR 344
P+ IT + +L +C+ AL A+ ++ + ++ S LVD+ ++ G
Sbjct: 515 PNSITLMTILPSCA-------ALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGC 567
Query: 345 LYEAYDIIRGMPVKVTVKAWGALLGACRTYG 375
L + + +P K V W ++ A +G
Sbjct: 568 LQMSRKVFDQIPQK-NVITWNVIIMAYGMHG 597
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 86/350 (24%), Positives = 160/350 (45%), Gaps = 40/350 (11%)
Query: 25 WTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIHSHS 84
W L S V+ ++A++ + + L + D Y +LK+ + + +LG IH+H
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDM-IVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHV 123
Query: 85 IKMGF-LSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSDA 143
K G+ + + VA LV++Y KC + K+FD I +RN V WN++IS +
Sbjct: 124 YKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLIS----------S 173
Query: 144 LYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRACV 203
L F+ +A +A + M + +++P+ TL++++ AC
Sbjct: 174 LCSFEKWEMALEA-----------------------FRCMLDENVEPSSFTLVSVVTACS 210
Query: 204 RM---TSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVA 260
+ L M K++H +R + + + + LV YG+ G L ++ + + RD+V
Sbjct: 211 NLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVT 269
Query: 261 WSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQ 320
W++++S+ + + ALE M + V PD+ T +VL ACSH + + A
Sbjct: 270 WNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYAL 329
Query: 321 QDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGA 370
++ L +S S LVD+ ++ + GM + W A++
Sbjct: 330 KNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGM-FDRKIGLWNAMIAG 378
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 102/225 (45%), Gaps = 9/225 (4%)
Query: 175 KAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIR-NHIDPHPQLRSGL 233
+A+ Y M L +KP+ ALL+A + + + K+IH + + + + L
Sbjct: 80 EAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTL 139
Query: 234 VEAYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDD 293
V Y +CG VF + ER+ V+W+SLIS+ + ALE F M V P
Sbjct: 140 VNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSS 199
Query: 294 ITFLAVLKACSHAGLADDALDYFARMQQDYGLQP---SSDHYSCLVDVLSRAGRLYEAYD 350
T ++V+ ACS+ + + + + YGL+ +S + LV + + G+L +
Sbjct: 200 FTLVSVVTACSNLPMPEGLM--MGKQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSKV 257
Query: 351 IIRGMPVKVTVKAWGALLGA-CRTYGEVELAEIAGRALFE-IEPD 393
++ + V W +L + C+ +E E + E +EPD
Sbjct: 258 LLGSFGGRDLV-TWNTVLSSLCQNEQLLEALEYLREMVLEGVEPD 301
>AT5G59600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:24011315-24012919 REVERSE
Length = 534
Score = 251 bits (640), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 142/413 (34%), Positives = 225/413 (54%), Gaps = 38/413 (9%)
Query: 34 KQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIHSHSIKMGFLSNP 93
+ G++Q++L F + L LD +++ +LK+ + + G IH +K + S+
Sbjct: 94 RNGYYQESLDFFREMYKD-GLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDA 152
Query: 94 FVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMH-- 151
F+ +L+DMY K +ARK+F ++ ++++VV+NAMIS Y +++ +AL + M
Sbjct: 153 FIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLL 212
Query: 152 -VAPDASTFNAIIAGLAGTE--------------DG--------------------SAKA 176
+ PD T+NA+I+G + DG + KA
Sbjct: 213 GIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKA 272
Query: 177 IAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEA 236
+ +M L PN T++ LL AC + + KEIHG S+ ++ H +RS L++
Sbjct: 273 FDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDM 332
Query: 237 YGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITF 296
YG+CG + A +F ++ V ++S+I YA HG A A+E F ME D +TF
Sbjct: 333 YGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTF 392
Query: 297 LAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMP 356
A+L ACSHAGL D + F MQ Y + P +HY+C+VD+L RAG+L EAY++I+ M
Sbjct: 393 TAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMR 452
Query: 357 VKVTVKAWGALLGACRTYGEVELAEIAGRALFEIEPDNPANYVLLARIYASMG 409
++ + WGALL ACR +G +ELA IA + L E+EP+N N +LL +YA+ G
Sbjct: 453 MEPDLFVWGALLAACRNHGNMELARIAAKHLAELEPENSGNGLLLTSLYANAG 505
>AT5G08310.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:2670134-2675254 REVERSE
Length = 1280
Score = 248 bits (632), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 138/379 (36%), Positives = 212/379 (55%), Gaps = 4/379 (1%)
Query: 57 DPYVLSLVLKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLF 116
D ++KS S + +LG ++H +K G + F+ L+ MYG SARKLF
Sbjct: 853 DHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLF 912
Query: 117 DEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKA 176
DE+P +N+V WN+++ Y S V A +FD M D T++++I G + +
Sbjct: 913 DEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMS-ERDVVTWSSMIDGYVKRGEYNKAL 971
Query: 177 IAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEA 236
F MR S K N +T+++++ AC + +LN K +H + H+ L++ L++
Sbjct: 972 EIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDM 1031
Query: 237 YGRCGCLINASNVFY--NMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDI 294
Y +CG + +A +VFY ++KE D + W+++I A HG R +L+ FH M +K+ PD+I
Sbjct: 1032 YAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEI 1091
Query: 295 TFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRG 354
TFL +L ACSH GL +A +F +++ G +P S+HY+C+VDVLSRAG + +A+D I
Sbjct: 1092 TFLCLLAACSHGGLVKEAWHFFKSLKES-GAEPKSEHYACMVDVLSRAGLVKDAHDFISE 1150
Query: 355 MPVKVTVKAWGALLGACRTYGEVELAEIAGRALFEIEPDNPANYVLLARIYASMGRHGEA 414
MP+K T GALL C +G +ELAE G+ L E++P N YV LA +YA + A
Sbjct: 1151 MPIKPTGSMLGALLNGCINHGNLELAETVGKKLIELQPHNDGRYVGLANVYAINKQFRAA 1210
Query: 415 XXXXXXXXXXGVKVAPGGS 433
GVK G S
Sbjct: 1211 RSMREAMEKKGVKKIAGHS 1229
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/302 (21%), Positives = 127/302 (42%), Gaps = 39/302 (12%)
Query: 138 NCVSDALYMFDAMHVAPDASTF--NAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITL 195
N SD Y + + D + N +I G + + + K+I+ Y +M L P+ +T
Sbjct: 799 NVTSDVDYAYKFLSKLSDPPNYGWNFVIRGFSNSRN-PEKSISVYIQMLRFGLLPDHMTY 857
Query: 196 LALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKE 255
L+++ R+++ + +H +++ ++ + + L+ YG +A +F M
Sbjct: 858 PFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPH 917
Query: 256 RDVVAWSSLISAYA-------------------------------LHGEARSALETFHH- 283
+++V W+S++ AYA GE ALE F
Sbjct: 918 KNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQM 977
Query: 284 MEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAG 343
M M +++T ++V+ AC+H G + R D L + + L+D+ ++ G
Sbjct: 978 MRMGSSKANEVTMVSVICACAHLGALNRG-KTVHRYILDVHLPLTVILQTSLIDMYAKCG 1036
Query: 344 RLYEAYDIIRGMPVKVT-VKAWGALLGACRTYGEVELAEIAGRALFE--IEPDNPANYVL 400
+ +A+ + VK T W A++G ++G + + + E I+PD L
Sbjct: 1037 SIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCL 1096
Query: 401 LA 402
LA
Sbjct: 1097 LA 1098
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/277 (20%), Positives = 119/277 (42%), Gaps = 14/277 (5%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
+++W+ ++ +VK+G + +AL +F+ + + + + V+ +C+ + G +H
Sbjct: 951 VVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVH 1010
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLF--DEIPQRNVVVWNAMISLYTHSNC 139
+ + + + +L+DMY KC S A +F + + + ++WNA+I
Sbjct: 1011 RYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGF 1070
Query: 140 VSDALYMFDAMH---VAPDASTFNAIIAGLAGTEDGSAK-AIAFYWRMRELSLKPNLITL 195
+ ++L +F M + PD TF ++A A + G K A F+ ++E +P
Sbjct: 1071 IRESLQLFHKMRESKIDPDEITFLCLLA--ACSHGGLVKEAWHFFKSLKESGAEPKSEHY 1128
Query: 196 LALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNV---FYN 252
++ R ++K+ H I P + L+ G L A V
Sbjct: 1129 ACMVDVLSRA---GLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLELAETVGKKLIE 1185
Query: 253 MKERDVVAWSSLISAYALHGEARSALETFHHMEMAKV 289
++ + + L + YA++ + R+A ME V
Sbjct: 1186 LQPHNDGRYVGLANVYAINKQFRAARSMREAMEKKGV 1222
>AT3G46790.1 | Symbols: CRR2 | CRR2 (CHLORORESPIRATORY REDUCTION 2)
| chr3:17231975-17233948 REVERSE
Length = 657
Score = 248 bits (632), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 140/388 (36%), Positives = 205/388 (52%), Gaps = 35/388 (9%)
Query: 52 LALSLDPYVLSLVLKSCSA----IHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCV 107
+ + D + + VLK+C A ++ G IH+H + G+ S+ ++ LVDMY +
Sbjct: 172 IGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFG 231
Query: 108 STFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLA 167
A +F +P RNVV W+AMI+ Y + +AL F M +
Sbjct: 232 CVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREM---------------MR 276
Query: 168 GTEDGSAKAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHP 227
T+D S PN +T++++L+AC + +L K IHG +R +D
Sbjct: 277 ETKDSS----------------PNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSIL 320
Query: 228 QLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMA 287
+ S LV YGRCG L VF M +RDVV+W+SLIS+Y +HG + A++ F M
Sbjct: 321 PVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLAN 380
Query: 288 KVLPDDITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYE 347
P +TF++VL ACSH GL ++ F M +D+G++P +HY+C+VD+L RA RL E
Sbjct: 381 GASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDE 440
Query: 348 AYDIIRGMPVKVTVKAWGALLGACRTYGEVELAEIAGRALFEIEPDNPANYVLLARIYAS 407
A +++ M + K WG+LLG+CR +G VELAE A R LF +EP N NYVLLA IYA
Sbjct: 441 AAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAE 500
Query: 408 MGRHGEAXXXXXXXXXXGVKVAPGGSWV 435
E G++ PG W+
Sbjct: 501 AQMWDEVKRVKKLLEHRGLQKLPGRCWM 528
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 112/382 (29%), Positives = 168/382 (43%), Gaps = 55/382 (14%)
Query: 3 CEAKLNQLRIMSYSSNYLRLISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLS 62
C LN I SS IS + + S K+G +QA+ V S S
Sbjct: 30 CSVALNNPSI---SSGAGAKISNNQLIQSLCKEGKLKQAIRVL-----SQESSPSQQTYE 81
Query: 63 LVLKSCSAIHRSQLGAA--IHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIP 120
L++ C HRS L A +H H + G +PF+A L+ MY S ARK+FD+
Sbjct: 82 LLILCCG--HRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTR 139
Query: 121 QRNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFY 180
+R + VWNA+ F A+ G E + Y
Sbjct: 140 KRTIYVWNAL----------------------------FRALTLAGHGEE-----VLGLY 166
Query: 181 WRMRELSLKPNLITLLALLRACV----RMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEA 236
W+M + ++ + T +L+ACV + L KEIH R H + + LV+
Sbjct: 167 WKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDM 226
Query: 237 YGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHM--EMAKVLPDDI 294
Y R GC+ AS VF M R+VV+WS++I+ YA +G+A AL TF M E P+ +
Sbjct: 227 YARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSV 286
Query: 295 TFLAVLKAC-SHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIR 353
T ++VL+AC S A L L + +++ GL S LV + R G+L +
Sbjct: 287 TMVSVLQACASLAALEQGKLIHGYILRR--GLDSILPVISALVTMYGRCGKLEVGQRVFD 344
Query: 354 GMPVKVTVKAWGALLGACRTYG 375
M + V +W +L+ + +G
Sbjct: 345 RMHDRDVV-SWNSLISSYGVHG 365
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 89/218 (40%), Gaps = 4/218 (1%)
Query: 190 PNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNV 249
P+ T L+ C +SL+ +H + N D P L + L+ Y G + A V
Sbjct: 75 PSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKV 134
Query: 250 FYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLA 309
F ++R + W++L A L G L + M V D T+ VLKAC +
Sbjct: 135 FDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECT 194
Query: 310 DDALDYFARMQQDYGLQPSSDH---YSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGA 366
+ L + + S H + LVD+ +R G + A + GMPV+ V +W A
Sbjct: 195 VNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVR-NVVSWSA 253
Query: 367 LLGACRTYGEVELAEIAGRALFEIEPDNPANYVLLARI 404
++ G+ A R + D+ N V + +
Sbjct: 254 MIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSV 291
>AT4G37170.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:17498580-17500655 REVERSE
Length = 691
Score = 244 bits (622), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 134/412 (32%), Positives = 220/412 (53%), Gaps = 33/412 (8%)
Query: 24 SWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIHSH 83
SWT + +VK+ ++ALV+++ +Q + + +S+ + + +A+ + G IH H
Sbjct: 184 SWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGH 243
Query: 84 SIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSDA 143
++ G S+ + +L+DMYGKC AR +FD+I +++VV W +MI Y S+ +
Sbjct: 244 IVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREG 303
Query: 144 LYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRACV 203
+F + L G+ + +PN T +L AC
Sbjct: 304 FSLF----------------SELVGSCE-----------------RPNEYTFAGVLNACA 330
Query: 204 RMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWSS 263
+T+ + K++HG R DP+ S LV+ Y +CG + +A +V + D+V+W+S
Sbjct: 331 DLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTS 390
Query: 264 LISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQDY 323
LI A +G+ AL+ F + + PD +TF+ VL AC+HAGL + L++F + + +
Sbjct: 391 LIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKH 450
Query: 324 GLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVELAEIA 383
L +SDHY+CLVD+L+R+GR + +I MP+K + W ++LG C TYG ++LAE A
Sbjct: 451 RLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEA 510
Query: 384 GRALFEIEPDNPANYVLLARIYASMGRHGEAXXXXXXXXXXGVKVAPGGSWV 435
+ LF+IEP+NP YV +A IYA+ G+ E GV PG SW
Sbjct: 511 AQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSWT 562
Score = 158 bits (399), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 96/321 (29%), Positives = 160/321 (49%), Gaps = 11/321 (3%)
Query: 64 VLKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRN 123
+++ CS + G +H H GF+ + L+ MY KC S ARK+FDE+P R+
Sbjct: 91 LIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRD 150
Query: 124 VVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRM 183
+ WN M++ Y + +A +FD M D+ ++ A++ G +D +A+ Y M
Sbjct: 151 LCSWNVMVNGYAEVGLLEEARKLFDEM-TEKDSYSWTAMVTGYV-KKDQPEEALVLYSLM 208
Query: 184 REL-SLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGC 242
+ + + +PN+ T+ + A + + KEIHG +R +D L S L++ YG+CGC
Sbjct: 209 QRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGC 268
Query: 243 LINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKA 302
+ A N+F + E+DVV+W+S+I Y R F + + P++ TF VL A
Sbjct: 269 IDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNA 328
Query: 303 C---SHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKV 359
C + L Y R+ G P S S LVD+ ++ G + A ++ G P K
Sbjct: 329 CADLTTEELGKQVHGYMTRV----GFDPYSFASSSLVDMYTKCGNIESAKHVVDGCP-KP 383
Query: 360 TVKAWGALLGACRTYGEVELA 380
+ +W +L+G C G+ + A
Sbjct: 384 DLVSWTSLIGGCAQNGQPDEA 404
>AT2G37310.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15665102-15667075 REVERSE
Length = 657
Score = 244 bits (622), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 134/414 (32%), Positives = 219/414 (52%), Gaps = 2/414 (0%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
++SW ++ + + G + ++ + + + V ++C G +H
Sbjct: 198 VVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVH 257
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVS 141
I+ + + A++ Y KC S AR LFDE+ +++ V + A+IS Y V
Sbjct: 258 KKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVK 317
Query: 142 DALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRA 201
+A+ +F M + ST+NA+I+GL + + I + M +PN +TL +LL +
Sbjct: 318 EAMALFSEME-SIGLSTWNAMISGLM-QNNHHEEVINSFREMIRCGSRPNTVTLSSLLPS 375
Query: 202 CVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAW 261
++L KEIH +IRN D + + + +++ Y + G L+ A VF N K+R ++AW
Sbjct: 376 LTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAW 435
Query: 262 SSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQ 321
+++I+AYA+HG++ SA F M+ PDD+T AVL A +H+G +D A F M
Sbjct: 436 TAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLT 495
Query: 322 DYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVELAE 381
Y ++P +HY+C+V VLSRAG+L +A + I MP+ K WGALL G++E+A
Sbjct: 496 KYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKMPIDPIAKVWGALLNGASVLGDLEIAR 555
Query: 382 IAGRALFEIEPDNPANYVLLARIYASMGRHGEAXXXXXXXXXXGVKVAPGGSWV 435
A LFE+EP+N NY ++A +Y GR EA G+K PG SW+
Sbjct: 556 FACDRLFEMEPENTGNYTIMANLYTQAGRWEEAEMVRNKMKRIGLKKIPGTSWI 609
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 148/334 (44%), Gaps = 53/334 (15%)
Query: 57 DPYVLSLVLKSCSAIHRSQLGA---AIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSAR 113
D +S VLK+ S LG+ +H I+ GF S+ FV ++ Y KC + SAR
Sbjct: 128 DSISISCVLKALSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESAR 187
Query: 114 KLFDEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGS 173
K+FDE+ +R+VV WN+MIS Y+ S D M+ AM D
Sbjct: 188 KVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSD------------------ 229
Query: 174 AKAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGL 233
KPN +T++++ +AC + + L E+H I NHI L + +
Sbjct: 230 --------------FKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAV 275
Query: 234 VEAYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDD 293
+ Y +CG L A +F M E+D V + ++IS Y HG + A+ F ME +
Sbjct: 276 IGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGL---- 331
Query: 294 ITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLS-----RAGRLYEA 348
T+ A++ ++ ++ F M + G +P++ S L+ L+ + G+ A
Sbjct: 332 STWNAMISGLMQNNHHEEVINSFREMIR-CGSRPNTVTLSSLLPSLTYSSNLKGGKEIHA 390
Query: 349 YDIIRGMPVKVTVKA--------WGALLGACRTY 374
+ I G + V G LLGA R +
Sbjct: 391 FAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVF 424
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 125/260 (48%), Gaps = 12/260 (4%)
Query: 130 MISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTE-DGSAKAIAFYWRMREL-- 186
+IS YT + AL++FD + V +A ++NA++ E A ++ W
Sbjct: 63 LISFYTRQDRFRQALHVFDEITV-RNAFSYNALLIAYTSREMYFDAFSLFLSWIGSSCYS 121
Query: 187 --SLKPNLITLLALLRA---CVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCG 241
+ +P+ I++ +L+A C ++ +++HG IR D + +G++ Y +C
Sbjct: 122 SDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMITYYTKCD 181
Query: 242 CLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHM-EMAKVLPDDITFLAVL 300
+ +A VF M ERDVV+W+S+IS Y+ G + + M + P+ +T ++V
Sbjct: 182 NIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVF 241
Query: 301 KACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVT 360
+AC + L+ +M +++ +Q + ++ ++ G L A + M K +
Sbjct: 242 QACGQSSDLIFGLEVHKKMIENH-IQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDS 300
Query: 361 VKAWGALLGACRTYGEVELA 380
V +GA++ +G V+ A
Sbjct: 301 V-TYGAIISGYMAHGLVKEA 319
>AT2G29760.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:12712884-12715100 FORWARD
Length = 738
Score = 243 bits (621), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 134/412 (32%), Positives = 221/412 (53%), Gaps = 2/412 (0%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
++SW +N V++G +AL +F +++ + + VL +C+ I + G +
Sbjct: 197 VVSWNSMINGFVQKGSPDKALELFKKMESE-DVKASHVTMVGVLSACAKIRNLEFGRQVC 255
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVS 141
S+ + N +A A++DMY KC S A++LFD + +++ V W M+ Y S
Sbjct: 256 SYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYE 315
Query: 142 DALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRA 201
A + ++M D +NA+I+ + I F+ + ++K N ITL++ L A
Sbjct: 316 AAREVLNSM-PQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSA 374
Query: 202 CVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAW 261
C ++ +L + + IH ++ I + + S L+ Y +CG L + VF ++++RDV W
Sbjct: 375 CAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVW 434
Query: 262 SSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQ 321
S++I A+HG A++ F+ M+ A V P+ +TF V ACSH GL D+A F +M+
Sbjct: 435 SAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMES 494
Query: 322 DYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVELAE 381
+YG+ P HY+C+VDVL R+G L +A I MP+ + WGALLGAC+ + + LAE
Sbjct: 495 NYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAE 554
Query: 382 IAGRALFEIEPDNPANYVLLARIYASMGRHGEAXXXXXXXXXXGVKVAPGGS 433
+A L E+EP N +VLL+ IYA +G+ G+K PG S
Sbjct: 555 MACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCS 606
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/351 (22%), Positives = 158/351 (45%), Gaps = 67/351 (19%)
Query: 57 DPYVLSLVLKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLF 116
+ Y ++K+ + + LG ++H ++K S+ FVA +L+ Y C SA K+F
Sbjct: 130 NKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVF 189
Query: 117 DEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKA 176
I +++VV WN+MI+ + +PD KA
Sbjct: 190 TTIKEKDVVSWNSMINGFVQKG--------------SPD-------------------KA 216
Query: 177 IAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEA 236
+ + +M +K + +T++ +L AC ++ +L +++ N ++ + L + +++
Sbjct: 217 LELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDM 276
Query: 237 YGRCGCLINASNVFYNMKE-------------------------------RDVVAWSSLI 265
Y +CG + +A +F M+E +D+VAW++LI
Sbjct: 277 YTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALI 336
Query: 266 SAYALHGEARSALETFHHMEMAKVLP-DDITFLAVLKACSHAGLADDALDYFARMQQDYG 324
SAY +G+ AL FH +++ K + + IT ++ L AC+ G A + + + +G
Sbjct: 337 SAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVG-ALELGRWIHSYIKKHG 395
Query: 325 LQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYG 375
++ + S L+ + S+ G L ++ ++ + K V W A++G +G
Sbjct: 396 IRMNFHVTSALIHMYSKCGDLEKSREVFNSVE-KRDVFVWSAMIGGLAMHG 445
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 142/341 (41%), Gaps = 49/341 (14%)
Query: 81 HSHSIKMGFLSNPFVACALVDMYGKCVSTFS----ARKLFDEIPQRNVVVWNAMISLYTH 136
H H I+ G S+P+ A L M +S+F+ ARK+FDEIP+ N WN +I Y
Sbjct: 50 HGHMIRTGTFSDPYSASKLFAMAA--LSSFASLEYARKVFDEIPKPNSFAWNTLIRAY-- 105
Query: 137 SNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLL 196
A D AF + E PN T
Sbjct: 106 ------------------------------ASGPDPVLSIWAFLDMVSESQCYPNKYTFP 135
Query: 197 ALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKER 256
L++A ++SL++ + +HG ++++ + + + L+ Y CG L +A VF +KE+
Sbjct: 136 FLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEK 195
Query: 257 DVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACS---HAGLADDAL 313
DVV+W+S+I+ + G ALE F ME V +T + VL AC+ +
Sbjct: 196 DVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVC 255
Query: 314 DYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRT 373
Y + + L + + ++D+ ++ G + +A + M K V W +L
Sbjct: 256 SYIEENRVNVNLTLA----NAMLDMYTKCGSIEDAKRLFDAMEEKDNV-TWTTMLDG--- 307
Query: 374 YGEVELAEIAGRALFEIEPDNPANYVLLARIYASMGRHGEA 414
Y E E A L + + + L Y G+ EA
Sbjct: 308 YAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEA 348
>AT4G37380.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:17572040-17573938 REVERSE
Length = 632
Score = 243 bits (621), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 138/415 (33%), Positives = 230/415 (55%), Gaps = 7/415 (1%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
L +T +N+ G QA +++ + +S ++ + + S +LKSCS ++ G IH
Sbjct: 95 LFLFTAAINTASINGLKDQAFLLYVQLLSS-EINPNEFTFSSLLKSCS----TKSGKLIH 149
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVS 141
+H +K G +P+VA LVD+Y K SA+K+FD +P+R++V AMI+ Y V
Sbjct: 150 THVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVE 209
Query: 142 DALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRA 201
A +FD+M D ++N +I G A + + F + E KP+ IT++A L A
Sbjct: 210 AARALFDSM-CERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSA 268
Query: 202 CVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAW 261
C ++ +L + IH + I + ++ +GL++ Y +CG L A VF + +D+VAW
Sbjct: 269 CSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAW 328
Query: 262 SSLISAYALHGEARSALETFHHME-MAKVLPDDITFLAVLKACSHAGLADDALDYFARMQ 320
+++I+ YA+HG ++ AL F+ M+ + + P DITF+ L+AC+HAGL ++ + F M
Sbjct: 329 NAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMG 388
Query: 321 QDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVELA 380
Q+YG++P +HY CLV +L RAG+L AY+ I+ M + W ++LG+C+ +G+ L
Sbjct: 389 QEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLG 448
Query: 381 EIAGRALFEIEPDNPANYVLLARIYASMGRHGEAXXXXXXXXXXGVKVAPGGSWV 435
+ L + N YVLL+ IYAS+G + G+ PG S +
Sbjct: 449 KEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTI 503
>AT1G33350.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:12090071-12091687 REVERSE
Length = 538
Score = 242 bits (617), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 135/383 (35%), Positives = 214/383 (55%), Gaps = 9/383 (2%)
Query: 59 YVLSLVLKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFS-ARKLFD 117
++ LVLKS + + +H+H K GF V AL+ Y VS + AR+LFD
Sbjct: 127 FIYPLVLKSTPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFD 186
Query: 118 EIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDG-SAKA 176
E+ +RNVV W AM+S Y S +S+A+ +F+ M D ++NAI+A A T++G +A
Sbjct: 187 EMSERNVVSWTAMLSGYARSGDISNAVALFEDM-PERDVPSWNAILA--ACTQNGLFLEA 243
Query: 177 IAFYWRM-RELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVE 235
++ + RM E S++PN +T++ +L AC + +L + K IH + R + + + LV+
Sbjct: 244 VSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVD 303
Query: 236 AYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHM---EMAKVLPD 292
YG+CG L AS+VF ++ + AW+S+I+ +ALHG + A+ F M + + PD
Sbjct: 304 LYGKCGNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPD 363
Query: 293 DITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDII 352
ITF+ +L AC+H GL YF M +G++P +HY CL+D+L RAGR EA +++
Sbjct: 364 HITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVM 423
Query: 353 RGMPVKVTVKAWGALLGACRTYGEVELAEIAGRALFEIEPDNPANYVLLARIYASMGRHG 412
M +K WG+LL AC+ +G ++LAE+A + L + P+N ++A +Y MG
Sbjct: 424 STMKMKADEAIWGSLLNACKIHGHLDLAEVAVKNLVALNPNNGGYVAMMANLYGEMGNWE 483
Query: 413 EAXXXXXXXXXXGVKVAPGGSWV 435
EA PG S +
Sbjct: 484 EARRARKMIKHQNAYKPPGWSRI 506
>AT3G03580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:860695-863343 REVERSE
Length = 882
Score = 239 bits (611), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 127/413 (30%), Positives = 211/413 (51%), Gaps = 34/413 (8%)
Query: 23 ISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIHS 82
+SW ++ +++ G +A+ +F + + D +++ + + + G +HS
Sbjct: 374 VSWNSIISGYIQSGDLMEAMKLFKMMMI-MEEQADHITYLMLISVSTRLADLKFGKGLHS 432
Query: 83 HSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSD 142
+ IK G + V+ AL+DMY KC + K+F + + V WN +I S CV
Sbjct: 433 NGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVI-----SACVR- 486
Query: 143 ALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRAC 202
F GL T +MR+ + P++ T L L C
Sbjct: 487 ----------------FGDFATGLQVTT-----------QMRKSEVVPDMATFLVTLPMC 519
Query: 203 VRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWS 262
+ + + KEIH C +R + Q+ + L+E Y +CGCL N+S VF M RDVV W+
Sbjct: 520 ASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWT 579
Query: 263 SLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQD 322
+I AY ++GE ALETF ME + ++PD + F+A++ ACSH+GL D+ L F +M+
Sbjct: 580 GMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTH 639
Query: 323 YGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVELAEI 382
Y + P +HY+C+VD+LSR+ ++ +A + I+ MP+K W ++L ACRT G++E AE
Sbjct: 640 YKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAER 699
Query: 383 AGRALFEIEPDNPANYVLLARIYASMGRHGEAXXXXXXXXXXGVKVAPGGSWV 435
R + E+ PD+P +L + YA++ + + + PG SW+
Sbjct: 700 VSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWI 752
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 89/359 (24%), Positives = 168/359 (46%), Gaps = 45/359 (12%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
L+SW ++ + G++++AL +++ ++ S + D + +S VL + + + G +H
Sbjct: 172 LVSWNSLISGYSSHGYYEEALEIYHELKNSWIVP-DSFTVSSVLPAFGNLLVVKQGQGLH 230
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVS 141
++K G S V LV MY K AR++FDE+ R+ V +N MI Y V
Sbjct: 231 GFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVE 290
Query: 142 DALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRA 201
+++ MF L + KP+L+T+ ++LRA
Sbjct: 291 ESVRMF------------------LENLD----------------QFKPDLLTVSSVLRA 316
Query: 202 CVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAW 261
C + L++ K I+ ++ +R+ L++ Y +CG +I A +VF +M+ +D V+W
Sbjct: 317 CGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSW 376
Query: 262 SSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQ 321
+S+IS Y G+ A++ F M + + D IT+L ++ + LAD F +
Sbjct: 377 NSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTR--LADLK---FGKGLH 431
Query: 322 DYGLQPSS----DHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGE 376
G++ + L+D+ ++ G + ++ I M TV W ++ AC +G+
Sbjct: 432 SNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTV-TWNTVISACVRFGD 489
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/357 (24%), Positives = 164/357 (45%), Gaps = 45/357 (12%)
Query: 25 WTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIHSHS 84
W + + K G +AL + ++ S +S D Y V+K+C+ + +++G ++
Sbjct: 74 WNSIIRAFSKNGLFPEALEFYGKLRES-KVSPDKYTFPSVIKACAGLFDAEMGDLVYEQI 132
Query: 85 IKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSDAL 144
+ MGF S+ FV ALVDMY + AR++FDE+P R++V WN++IS Y+ +AL
Sbjct: 133 LDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEAL 192
Query: 145 YMFDAMH---VAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRA 201
++ + + PD+ T ++++ P LL + +
Sbjct: 193 EIYHELKNSWIVPDSFTVSSVL--------------------------PAFGNLLVVKQG 226
Query: 202 CVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAW 261
+ +HG ++++ ++ + +GLV Y + +A VF M RD V++
Sbjct: 227 ----------QGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSY 276
Query: 262 SSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDAL-DYFARMQ 320
+++I Y ++ F + + PD +T +VL+AC H L D +L Y
Sbjct: 277 NTMICGYLKLEMVEESVRMFLE-NLDQFKPDLLTVSSVLRACGH--LRDLSLAKYIYNYM 333
Query: 321 QDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEV 377
G S + L+DV ++ G + A D+ M K TV +W +++ G++
Sbjct: 334 LKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTV-SWNSIISGYIQSGDL 389
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 154/350 (44%), Gaps = 36/350 (10%)
Query: 57 DPYVLSLVLKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLF 116
D +S VL++C + L I+++ +K GF+ V L+D+Y KC +AR +F
Sbjct: 306 DLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVF 365
Query: 117 DEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKA 176
+ + ++ V WN++IS Y S + +A+ +F M + +
Sbjct: 366 NSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEE--------------------- 404
Query: 177 IAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEA 236
+ + IT L L+ R+ L K +H I++ I + + L++
Sbjct: 405 ------------QADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDM 452
Query: 237 YGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITF 296
Y +CG + ++ +F +M D V W+++ISA G+ + L+ M ++V+PD TF
Sbjct: 453 YAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATF 512
Query: 297 LAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMP 356
L L C+ + + + +G + + L+++ S+ G L + + M
Sbjct: 513 LVTLPMCASLAAKRLGKEIHCCLLR-FGYESELQIGNALIEMYSKCGCLENSSRVFERMS 571
Query: 357 VKVTVKAWGALLGACRTYGEVELAEIAGRALFEIEPDNPANYVLLARIYA 406
+ V W ++ A YGE E A + A E P + V +A IYA
Sbjct: 572 RRDVV-TWTGMIYAYGMYGEGEKA-LETFADMEKSGIVPDSVVFIAIIYA 619
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 102/224 (45%), Gaps = 34/224 (15%)
Query: 80 IHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEI-PQRNVVVWNAMISLYTHSN 138
IH+ I +G S+ F + L+D Y S+ +F + P +NV +WN++I ++ +
Sbjct: 26 IHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSKNG 85
Query: 139 CVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLAL 198
+AL FY ++RE + P+ T ++
Sbjct: 86 LFPEAL---------------------------------EFYGKLRESKVSPDKYTFPSV 112
Query: 199 LRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDV 258
++AC + M ++ + + + + LV+ Y R G L A VF M RD+
Sbjct: 113 IKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDL 172
Query: 259 VAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKA 302
V+W+SLIS Y+ HG ALE +H ++ + ++PD T +VL A
Sbjct: 173 VSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPA 216
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 89/183 (48%), Gaps = 5/183 (2%)
Query: 200 RACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKE-RDV 258
RA ++LN ++ IH I +D L++ Y ++ +VF + ++V
Sbjct: 12 RALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNV 71
Query: 259 VAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDAL-DYFA 317
W+S+I A++ +G ALE + + +KV PD TF +V+KAC AGL D + D
Sbjct: 72 YLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKAC--AGLFDAEMGDLVY 129
Query: 318 RMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEV 377
D G + + LVD+ SR G L A + MPV+ V +W +L+ ++G
Sbjct: 130 EQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLV-SWNSLISGYSSHGYY 188
Query: 378 ELA 380
E A
Sbjct: 189 EEA 191
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD
Length = 743
Score = 239 bits (611), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 129/413 (31%), Positives = 200/413 (48%), Gaps = 34/413 (8%)
Query: 23 ISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIHS 82
+SW + + G ++A+ F ++ L +D Y VL +C + G IH+
Sbjct: 236 VSWAAMIKGLAQNGLAKEAIECFREMKVQ-GLKMDQYPFGSVLPACGGLGAINEGKQIHA 294
Query: 83 HSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSD 142
I+ F + +V AL+DMY KC A+ +FD + Q+NVV W AM+ Y
Sbjct: 295 CIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGY-------- 346
Query: 143 ALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRAC 202
G + +A+ + M+ + P+ TL + AC
Sbjct: 347 -------------------------GQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISAC 381
Query: 203 VRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWS 262
++SL + HG +I + + + + + LV YG+CG + +++ +F M RD V+W+
Sbjct: 382 ANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWT 441
Query: 263 SLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQD 322
+++SAYA G A ++ F M + PD +T V+ ACS AGL + YF M +
Sbjct: 442 AMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSE 501
Query: 323 YGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVELAEI 382
YG+ PS HYSC++D+ SR+GRL EA I GMP W LL ACR G +E+ +
Sbjct: 502 YGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKW 561
Query: 383 AGRALFEIEPDNPANYVLLARIYASMGRHGEAXXXXXXXXXXGVKVAPGGSWV 435
A +L E++P +PA Y LL+ IYAS G+ VK PG SW+
Sbjct: 562 AAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWI 614
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 104/397 (26%), Positives = 189/397 (47%), Gaps = 21/397 (5%)
Query: 23 ISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIHS 82
++W + + G A+ +N + + +L L +LK S+ LG IH
Sbjct: 104 VTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHG 163
Query: 83 HSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSD 142
IK+GF S V L+ MY A+K+F + RN V++N+++ + D
Sbjct: 164 QVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIED 223
Query: 143 ALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAK-AIAFYWRMRELSLKPNLITLLALLRA 201
AL +F M D+ ++ A+I GLA ++G AK AI + M+ LK + ++L A
Sbjct: 224 ALQLFRGME--KDSVSWAAMIKGLA--QNGLAKEAIECFREMKVQGLKMDQYPFGSVLPA 279
Query: 202 CVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAW 261
C + ++N K+IH C IR + H + S L++ Y +C CL A VF MK+++VV+W
Sbjct: 280 CGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSW 339
Query: 262 SSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQ 321
++++ Y G A A++ F M+ + + PD T + AC++ ++ + +
Sbjct: 340 TAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGK--- 396
Query: 322 DYGLQPSSDHY----SCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGE- 376
+ HY + LV + + G + ++ + M V+ V +W A++ A +G
Sbjct: 397 --AITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAV-SWTAMVSAYAQFGRA 453
Query: 377 VELAEIAGRAL-FEIEPDNPANYVLLARIYASMGRHG 412
VE ++ + + ++PD V L + ++ R G
Sbjct: 454 VETIQLFDKMVQHGLKPDG----VTLTGVISACSRAG 486
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 130/262 (49%), Gaps = 9/262 (3%)
Query: 62 SLVLKSC---SAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDE 118
S+ +K C A ++S+ IH + I+ F+ +V Y S+ AR++FD
Sbjct: 7 SVQIKQCIGLGARNQSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDR 66
Query: 119 IPQRNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIA 178
IPQ N+ WN ++ Y+ + +S+ F+ + D T+N +I G + + A A
Sbjct: 67 IPQPNLFSWNNLLLAYSKAGLISEMESTFEKLP-DRDGVTWNVLIEGYSLSGLVGAAVKA 125
Query: 179 FYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYG 238
+ MR+ S +TL+ +L+ +++ K+IHG I+ + + + S L+ Y
Sbjct: 126 YNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYA 185
Query: 239 RCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLA 298
GC+ +A VFY + +R+ V ++SL+ G AL+ F ME D +++ A
Sbjct: 186 NVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGME-----KDSVSWAA 240
Query: 299 VLKACSHAGLADDALDYFARMQ 320
++K + GLA +A++ F M+
Sbjct: 241 MIKGLAQNGLAKEAIECFREMK 262
>AT5G56310.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:22802322-22803914 FORWARD
Length = 530
Score = 239 bits (611), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 135/399 (33%), Positives = 217/399 (54%), Gaps = 7/399 (1%)
Query: 38 HQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVAC 97
H A+ V+ + +L D + VLK + G IH + GF S+ V
Sbjct: 97 HSIAITVYRKLW-ALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVT 155
Query: 98 ALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMHV-APDA 156
L+ MY C ARK+FDE+ ++V VWNA+++ Y + +A + + M +
Sbjct: 156 GLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNE 215
Query: 157 STFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHG 216
++ +I+G A + S +AI + RM +++P+ +TLLA+L AC + SL + + I
Sbjct: 216 VSWTCVISGYAKSGRAS-EAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERI-- 272
Query: 217 CSIRNH--IDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEA 274
CS +H ++ L + +++ Y + G + A +VF + ER+VV W+++I+ A HG
Sbjct: 273 CSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHG 332
Query: 275 RSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSC 334
AL F+ M A V P+D+TF+A+L ACSH G D F M+ YG+ P+ +HY C
Sbjct: 333 AEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGC 392
Query: 335 LVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVELAEIAGRALFEIEPDN 394
++D+L RAG+L EA ++I+ MP K WG+LL A + ++EL E A L ++EP+N
Sbjct: 393 MIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERALSELIKLEPNN 452
Query: 395 PANYVLLARIYASMGRHGEAXXXXXXXXXXGVKVAPGGS 433
NY+LLA +Y+++GR E+ GVK G S
Sbjct: 453 SGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGES 491
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 119/255 (46%), Gaps = 44/255 (17%)
Query: 23 ISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSL--VLKSCSAIHRSQLGAAI 80
+SWT ++ + K G +A+ VF Q L +++P ++L VL +C+ + +LG I
Sbjct: 216 VSWTCVISGYAKSGRASEAIEVF---QRMLMENVEPDEVTLLAVLSACADLGSLELGERI 272
Query: 81 HSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMIS-LYTHSNC 139
S+ G + A++DMY K + A +F+ + +RNVV W +I+ L TH +
Sbjct: 273 CSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHG 332
Query: 140 VSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALL 199
++AL MF+ RM + ++PN +T +A+L
Sbjct: 333 -AEALAMFN---------------------------------RMVKAGVRPNDVTFIAIL 358
Query: 200 RACVRMTSLNMIKEIHGCSIRNHIDPHPQLR--SGLVEAYGRCGCLINASNVFYNMK-ER 256
AC + +++ K + S+R+ HP + +++ GR G L A V +M +
Sbjct: 359 SACSHVGWVDLGKRLFN-SMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKA 417
Query: 257 DVVAWSSLISAYALH 271
+ W SL++A +H
Sbjct: 418 NAAIWGSLLAASNVH 432
>AT3G13770.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4519647-4521533 FORWARD
Length = 628
Score = 239 bits (609), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 138/416 (33%), Positives = 211/416 (50%), Gaps = 36/416 (8%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
++SWT ++ + + G +AL VF + S + + + VL SC LG IH
Sbjct: 118 VVSWTAMISRYSQTGHSSEALTVFAEMMRSDG-KPNEFTFATVLTSCIRASGLGLGKQIH 176
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVS 141
+K + S+ FV +L+DMY K AR++F+ +P+R+VV A+I+ Y
Sbjct: 177 GLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDE 236
Query: 142 DALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRA 201
+AL MF R+ + PN +T +LL A
Sbjct: 237 EALEMFH---------------------------------RLHSEGMSPNYVTYASLLTA 263
Query: 202 CVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAW 261
+ L+ K+ H +R + + L++ L++ Y +CG L A +F NM ER ++W
Sbjct: 264 LSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISW 323
Query: 262 SSLISAYALHGEARSALETFHHM-EMAKVLPDDITFLAVLKACSHAGLADDALDYFARM- 319
++++ Y+ HG R LE F M + +V PD +T LAVL CSH + D L+ F M
Sbjct: 324 NAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMV 383
Query: 320 QQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVEL 379
+YG +P ++HY C+VD+L RAGR+ EA++ I+ MP K T G+LLGACR + V++
Sbjct: 384 AGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDI 443
Query: 380 AEIAGRALFEIEPDNPANYVLLARIYASMGRHGEAXXXXXXXXXXGVKVAPGGSWV 435
E GR L EIEP+N NYV+L+ +YAS GR + V PG SW+
Sbjct: 444 GESVGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSWI 499
Score = 131 bits (330), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 150/323 (46%), Gaps = 57/323 (17%)
Query: 64 VLKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRN 123
+L +C + G +H+H IK +L ++ L+ YGKC ARK+ DE+P++N
Sbjct: 58 LLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKN 117
Query: 124 VVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRM 183
VV W AMIS Y+ + S+AL +F M + DG
Sbjct: 118 VVSWTAMISRYSQTGHSSEALTVFAEMMRS-----------------DG----------- 149
Query: 184 RELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCL 243
KPN T +L +C+R + L + K+IHG ++ + D H + S L++ Y + G +
Sbjct: 150 -----KPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQI 204
Query: 244 INASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKAC 303
A +F + ERDVV+ +++I+ YA G ALE FH + + P+ +T+ ++L A
Sbjct: 205 KEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTAL 264
Query: 304 SHAGLADDA-----------LDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDII 352
S L D L ++A +Q + L+D+ S+ G L A +
Sbjct: 265 SGLALLDHGKQAHCHVLRRELPFYAVLQ------------NSLIDMYSKCGNLSYARRLF 312
Query: 353 RGMPVKVTVKAWGALLGACRTYG 375
MP + + +W A+L +G
Sbjct: 313 DNMPERTAI-SWNAMLVGYSKHG 334
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 101/216 (46%), Gaps = 12/216 (5%)
Query: 197 ALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKER 256
ALL AC+ +L + +H I+ P LR+ L+ YG+C CL +A V M E+
Sbjct: 57 ALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEK 116
Query: 257 DVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHA---GLADDAL 313
+VV+W+++IS Y+ G + AL F M + P++ TF VL +C A GL
Sbjct: 117 NVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIH 176
Query: 314 DYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRT 373
+ D + S L+D+ ++AG++ EA +I +P + V + G
Sbjct: 177 GLIVKWNYDSHIFVGSS----LLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAG---- 228
Query: 374 YGEVELAEIAGRALFEIEPDN-PANYVLLARIYASM 408
Y ++ L E A + + NYV A + ++
Sbjct: 229 YAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTAL 264
>AT2G13600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:5671493-5673586 FORWARD
Length = 697
Score = 238 bits (607), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 135/422 (31%), Positives = 221/422 (52%), Gaps = 12/422 (2%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
++SW + + G +AL VF + S + D L+ V+ +C+++ ++G +H
Sbjct: 218 VVSWNSLITCFEQNGPAVEALDVFQMMLES-RVEPDEVTLASVISACASLSAIKVGQEVH 276
Query: 82 SHSIKMGFLSNPFV-ACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCV 140
+K L N + + A VDMY KC AR +FD +P RNV+ +MIS Y +
Sbjct: 277 GRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAAST 336
Query: 141 SDALYMFDAMHVAPDASTFNAIIAGLAGTEDG-SAKAIAFYWRMRELSLKPNLITLLALL 199
A MF M + ++NA+IAG T++G + +A++ + ++ S+ P + +L
Sbjct: 337 KAARLMFTKM-AERNVVSWNALIAGY--TQNGENEEALSLFCLLKRESVCPTHYSFANIL 393
Query: 200 RACVRMTSLNMIKEIH------GCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNM 253
+AC + L++ + H G ++ + + + L++ Y +CGC+ VF M
Sbjct: 394 KACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKM 453
Query: 254 KERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDAL 313
ERD V+W+++I +A +G ALE F M + PD IT + VL AC HAG ++
Sbjct: 454 MERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGR 513
Query: 314 DYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRT 373
YF+ M +D+G+ P DHY+C+VD+L RAG L EA +I MP++ WG+LL AC+
Sbjct: 514 HYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKV 573
Query: 374 YGEVELAEIAGRALFEIEPDNPANYVLLARIYASMGRHGEAXXXXXXXXXXGVKVAPGGS 433
+ + L + L E+EP N YVLL+ +YA +G+ + GV PG S
Sbjct: 574 HRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCS 633
Query: 434 WV 435
W+
Sbjct: 634 WI 635
Score = 142 bits (357), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 164/321 (51%), Gaps = 9/321 (2%)
Query: 45 FNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAA----IHSHSIKMGFLSNPFVACALV 100
F + L+ D + +L SC +S+L A +H+ IK GF + F+ L+
Sbjct: 6 FLKLAADLSSFTDSSPFAKLLDSCI---KSKLSAIYVRYVHASVIKSGFSNEIFIQNRLI 62
Query: 101 DMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFN 160
D Y KC S R++FD++PQRN+ WN++++ T + +A +F +M D T+N
Sbjct: 63 DAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMP-ERDQCTWN 121
Query: 161 AIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIR 220
++++G A D +A+ ++ M + N + ++L AC + +N ++H +
Sbjct: 122 SMVSGFA-QHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAK 180
Query: 221 NHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALET 280
+ + S LV+ Y +CG + +A VF M +R+VV+W+SLI+ + +G A AL+
Sbjct: 181 SPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDV 240
Query: 281 FHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLS 340
F M ++V PD++T +V+ AC+ + R+ ++ L+ + VD+ +
Sbjct: 241 FQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYA 300
Query: 341 RAGRLYEAYDIIRGMPVKVTV 361
+ R+ EA I MP++ +
Sbjct: 301 KCSRIKEARFIFDSMPIRNVI 321
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 117/276 (42%), Gaps = 56/276 (20%)
Query: 11 RIMSYSSNYLRLISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSA 70
R+M ++SW + + + G +++AL +F ++ ++ Y + +LK+C+
Sbjct: 340 RLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRE-SVCPTHYSFANILKACAD 398
Query: 71 IHRSQLGAAIHSHSIKMGFL------SNPFVACALVDMYGKCVSTFSARKLFDEIPQRNV 124
+ LG H H +K GF + FV +L+DMY KC +F ++ +R+
Sbjct: 399 LAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDC 458
Query: 125 VVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMR 184
V WNAMI + + ++AL +F M E G
Sbjct: 459 VSWNAMIIGFAQNGYGNEALELFREM------------------LESGE----------- 489
Query: 185 ELSLKPNLITLLALLRAC--------VRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEA 236
KP+ IT++ +L AC R +M ++ +R+H + +V+
Sbjct: 490 ----KPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHY-------TCMVDL 538
Query: 237 YGRCGCLINASNVFYNMK-ERDVVAWSSLISAYALH 271
GR G L A ++ M + D V W SL++A +H
Sbjct: 539 LGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVH 574
>AT1G50270.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:18622044-18623834 FORWARD
Length = 596
Score = 238 bits (606), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 127/415 (30%), Positives = 218/415 (52%), Gaps = 35/415 (8%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
+++WT ++ V+ G +A+V F ++ + + + V+S VLK+ + + G ++H
Sbjct: 169 VVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVS-VLKAAGKVEDVRFGRSVH 227
Query: 82 SHSIKMGFLS-NPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCV 140
++ G + + F+ +LVDMYGKC A+K+FDE+P RNVV W A+I+ Y S C
Sbjct: 228 GLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCF 287
Query: 141 SDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLR 200
+ +F+ M + D + PN TL ++L
Sbjct: 288 DKGMLVFEEM-LKSDVA--------------------------------PNEKTLSSVLS 314
Query: 201 ACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVA 260
AC + +L+ + +H I+N I+ + + L++ Y +CGCL A VF + E++V
Sbjct: 315 ACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYT 374
Query: 261 WSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQ 320
W+++I+ +A HG AR A + F+ M + V P+++TF+AVL AC+H GL ++ F M+
Sbjct: 375 WTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMK 434
Query: 321 QDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVELA 380
+ ++P +DHY+C+VD+ R G L EA +I MP++ T WGAL G+C + + EL
Sbjct: 435 GRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLHKDYELG 494
Query: 381 EIAGRALFEIEPDNPANYVLLARIYASMGRHGEAXXXXXXXXXXGVKVAPGGSWV 435
+ A + +++P + Y LLA +Y+ E V +PG SW+
Sbjct: 495 KYAASRVIKLQPSHSGRYTLLANLYSESQNWDEVARVRKQMKDQQVVKSPGFSWI 549
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 129/297 (43%), Gaps = 36/297 (12%)
Query: 80 IHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNC 139
H+H +K G S+PFV +L+ Y A +LFD ++VV W AMI + +
Sbjct: 125 FHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGS 184
Query: 140 VSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALL 199
S+A+ ++ M++ + N +T++++L
Sbjct: 185 ASEAM---------------------------------VYFVEMKKTGVAANEMTVVSVL 211
Query: 200 RACVRMTSLNMIKEIHGCSIRN-HIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDV 258
+A ++ + + +HG + + + S LV+ YG+C C +A VF M R+V
Sbjct: 212 KAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNV 271
Query: 259 VAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFAR 318
V W++LI+ Y + F M + V P++ T +VL AC+H G
Sbjct: 272 VTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCY 331
Query: 319 MQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYG 375
M ++ ++ ++ + L+D+ + G L EA + + K V W A++ +G
Sbjct: 332 MIKN-SIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEK-NVYTWTAMINGFAAHG 386
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 90/198 (45%), Gaps = 16/198 (8%)
Query: 180 YWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGR 239
Y MR + P+ T LL+A ++ N + H ++ +D P +R+ L+ Y
Sbjct: 92 YRHMRRNGVIPSRHTFPPLLKAVFKLRDSNPF-QFHAHIVKFGLDSDPFVRNSLISGYSS 150
Query: 240 CGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAV 299
G AS +F +++DVV W+++I + +G A A+ F M+ V +++T ++V
Sbjct: 151 SGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSV 210
Query: 300 LKACSHAGLADDALDYFARMQQDYGLQPSSDHYSC-------LVDVLSRAGRLYEAYDII 352
LKA AG +D F R +GL + C LVD+ + +A +
Sbjct: 211 LKA---AGKVEDV--RFGR--SVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVF 263
Query: 353 RGMPVKVTVKAWGALLGA 370
MP + V W AL+
Sbjct: 264 DEMPSR-NVVTWTALIAG 280
>AT4G02750.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:1221116-1223461 REVERSE
Length = 781
Score = 237 bits (604), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 134/432 (31%), Positives = 219/432 (50%), Gaps = 11/432 (2%)
Query: 4 EAKLNQLRIMSYSSNYLRLISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSL 63
+ K+ + R S N ++SW + + + G +A +F+ + V
Sbjct: 232 KKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGY 291
Query: 64 VLKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRN 123
+ R + + + +V ++M A++LFD +P RN
Sbjct: 292 IQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEM---------AKELFDVMPCRN 342
Query: 124 VVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRM 183
V WN MI+ Y +S+A +FD M D ++ A+IAG + + S +A+ + +M
Sbjct: 343 VSTWNTMITGYAQCGKISEAKNLFDKMP-KRDPVSWAAMIAGYSQS-GHSFEALRLFVQM 400
Query: 184 RELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCL 243
+ N + + L C + +L + K++HG ++ + + + L+ Y +CG +
Sbjct: 401 EREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSI 460
Query: 244 INASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKAC 303
A+++F M +D+V+W+++I+ Y+ HG AL F M+ + PDD T +AVL AC
Sbjct: 461 EEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSAC 520
Query: 304 SHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKA 363
SH GL D YF M QDYG+ P+S HY+C+VD+L RAG L +A+++++ MP +
Sbjct: 521 SHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAI 580
Query: 364 WGALLGACRTYGEVELAEIAGRALFEIEPDNPANYVLLARIYASMGRHGEAXXXXXXXXX 423
WG LLGA R +G ELAE A +F +EP+N YVLL+ +YAS GR G+
Sbjct: 581 WGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRD 640
Query: 424 XGVKVAPGGSWV 435
GVK PG SW+
Sbjct: 641 KGVKKVPGYSWI 652
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 87/356 (24%), Positives = 146/356 (41%), Gaps = 68/356 (19%)
Query: 106 CVSTFSARKLFDEIPQRNVVVWNAMISLYTHS---------------------NC----- 139
CV AR +FD +P++N V WNA++S Y + NC
Sbjct: 172 CVD--DARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGF 229
Query: 140 -----VSDALYMFDAMHVAPDASTFNAIIAGLAGTE---------DGSAKAIAFYW---- 181
+ +A FD+M+V D ++N II G A + D S F W
Sbjct: 230 VKKKKIVEARQFFDSMNVR-DVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMV 288
Query: 182 ------RM----RELSLK---PNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQ 228
RM REL K N ++ A+L V+ + M KE+ ++
Sbjct: 289 SGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNT 348
Query: 229 LRSGLVEAYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAK 288
+ +G Y +CG + A N+F M +RD V+W+++I+ Y+ G + AL F ME
Sbjct: 349 MITG----YAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREG 404
Query: 289 VLPDDITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEA 348
+ +F + L C+ + R+ + G + + L+ + + G + EA
Sbjct: 405 GRLNRSSFSSALSTCADVVALELGKQLHGRLVKG-GYETGCFVGNALLLMYCKCGSIEEA 463
Query: 349 YDIIRGMPVKVTVKAWGALL-GACR-TYGEVELAEIAGRALFEIEPDNPANYVLLA 402
D+ + M K V +W ++ G R +GEV L ++PD+ +L+
Sbjct: 464 NDLFKEMAGKDIV-SWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLS 518
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 141/306 (46%), Gaps = 29/306 (9%)
Query: 112 ARKLFDEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTED 171
ARKLFDE+P+R++V WN MI Y + + A +F+ M D ++N +++G A ++
Sbjct: 114 ARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIM-PERDVCSWNTMLSGYA--QN 170
Query: 172 GSA-KAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLR 230
G A + + RM E N ++ ALL A V+ + + C + + +
Sbjct: 171 GCVDDARSVFDRMPE----KNDVSWNALLSAYVQNSKME-----EACMLFKSRENWALVS 221
Query: 231 -SGLVEAYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKV 289
+ L+ + + ++ A F +M RDVV+W+++I+ YA G+ A + F + V
Sbjct: 222 WNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDV 281
Query: 290 LPDDITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAY 349
T+ A++ + ++A + F +M + + ++ ++ + R+ A
Sbjct: 282 F----TWTAMVSGYIQNRMVEEARELFDKMPERNEVS-----WNAMLAGYVQGERMEMAK 332
Query: 350 DIIRGMPVKVTVKAWGALLGACRTYGEVELAEIAGRALFEIEPD-NPANYVLLARIYASM 408
++ MP + V W ++ G++ A + LF+ P +P ++ + Y+
Sbjct: 333 ELFDVMPCR-NVSTWNTMITGYAQCGKISEA----KNLFDKMPKRDPVSWAAMIAGYSQS 387
Query: 409 GRHGEA 414
G EA
Sbjct: 388 GHSFEA 393
>AT3G01580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:223529-225454 REVERSE
Length = 641
Score = 237 bits (604), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 138/409 (33%), Positives = 213/409 (52%), Gaps = 38/409 (9%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSL--VLKSCSAIHRSQLGAA 79
+ISW+ + +V+ G +AL+VFN + +P V ++ VL++C+A H + G
Sbjct: 210 VISWSTVIACYVQNGAAAEALLVFNDMMDD---GTEPNVATVLCVLQACAAAHDLEQGRK 266
Query: 80 IHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNC 139
H +I+ G + V+ ALVDMY KC S A +F IP+++VV W A+IS +T +
Sbjct: 267 THELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGM 326
Query: 140 VSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALL 199
++ F M + E + +P+ I ++ +L
Sbjct: 327 AHRSIEEFSIM--------------------------------LLENNTRPDAILMVKVL 354
Query: 200 RACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVV 259
+C + L K H I+ D +P + + LVE Y RCG L NAS VF + +D V
Sbjct: 355 GSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTV 414
Query: 260 AWSSLISAYALHGEARSALETFHHM-EMAKVLPDDITFLAVLKACSHAGLADDALDYFAR 318
W+SLI+ Y +HG+ ALETF+HM + ++V P+++TFL++L ACSHAGL + L F
Sbjct: 415 VWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKL 474
Query: 319 MQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVE 378
M DY L P+ +HY+ LVD+L R G L A +I + MP T + G LLGACR + E
Sbjct: 475 MVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGE 534
Query: 379 LAEIAGRALFEIEPDNPANYVLLARIYASMGRHGEAXXXXXXXXXXGVK 427
+AE + LFE+E ++ Y+L++ +Y G G+K
Sbjct: 535 MAETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIK 583
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 98/394 (24%), Positives = 174/394 (44%), Gaps = 41/394 (10%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
L W L S ++ ++ L F+H+ D + L + LK+C + G IH
Sbjct: 6 LYQWNTLLKSLSREKQWEEVLYHFSHMFRDEE-KPDNFTLPVALKACGELREVNYGEMIH 64
Query: 82 SHSIK-MGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCV 140
K + S+ +V +L+ MY KC MI
Sbjct: 65 GFVKKDVTLGSDLYVGSSLIYMYIKC---------------------GRMI--------- 94
Query: 141 SDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSA-KAIAFYWRMRELS-LKPNLITLLAL 198
+AL MFD + PD T++++++G ++GS +A+ F+ RM S + P+ +TL+ L
Sbjct: 95 -EALRMFDELE-KPDIVTWSSMVSGFE--KNGSPYQAVEFFRRMVMASDVTPDRVTLITL 150
Query: 199 LRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDV 258
+ AC ++++ + + +HG IR L + L+ Y + A N+F + E+DV
Sbjct: 151 VSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDV 210
Query: 259 VAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFAR 318
++WS++I+ Y +G A AL F+ M P+ T L VL+AC+ A +
Sbjct: 211 ISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTH-E 269
Query: 319 MQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVE 378
+ GL+ + LVD+ + EAY + +P K V +W AL+ G
Sbjct: 270 LAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVV-SWVALISGFTLNGMAH 328
Query: 379 LAEIAGRALFEIEPDNPANYVLLARIYASMGRHG 412
+ I ++ +E + + +L+ ++ S G
Sbjct: 329 RS-IEEFSIMLLENNTRPDAILMVKVLGSCSELG 361
>AT1G28690.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:10080042-10081604 REVERSE
Length = 520
Score = 237 bits (604), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 130/421 (30%), Positives = 223/421 (52%), Gaps = 8/421 (1%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSA-----IHRSQL 76
L ++ ++ ++K G ++ L++ + S D Y LS+VLK+ ++ I L
Sbjct: 100 LSAYNYMISGYLKHGLVKELLLLVQRMSYS-GEKADGYTLSMVLKASNSRGSTMILPRSL 158
Query: 77 GAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTH 136
+H+ IK + + ALVD Y K SAR +F+ + NVV +MIS Y +
Sbjct: 159 CRLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMN 218
Query: 137 SNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLL 196
V DA +F+ V D +NA++ G + + + + +++ Y M+ PN+ T
Sbjct: 219 QGFVEDAEEIFNTTKVK-DIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFA 277
Query: 197 ALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKER 256
+++ AC +TS + +++H +++ + H ++ S L++ Y +CG + +A VF M+E+
Sbjct: 278 SVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEK 337
Query: 257 DVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYF 316
+V +W+S+I Y +G ALE F M+ ++ P+ +TFL L ACSH+GL D + F
Sbjct: 338 NVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIF 397
Query: 317 ARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGE 376
MQ+DY ++P +HY+C+VD++ RAG L +A++ R MP + W ALL +C +G
Sbjct: 398 ESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGN 457
Query: 377 VELAEIAGRALFEIEPDN-PANYVLLARIYASMGRHGEAXXXXXXXXXXGVKVAPGGSWV 435
VELA IA LF++ D P Y+ L+ +YAS + + G SW
Sbjct: 458 VELASIAASELFKLNADKRPGAYLALSNVYASNDKWDNVSKIREVMKRRRISKTIGRSWT 517
Query: 436 T 436
+
Sbjct: 518 S 518
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/306 (22%), Positives = 124/306 (40%), Gaps = 66/306 (21%)
Query: 5 AKLNQLRIMSYSSNYLRLISWTKQLNSHVKQGFHQQALVVFNHIQT-------------- 50
KL R + + ++ T ++ ++ QGF + A +FN +
Sbjct: 189 GKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFS 248
Query: 51 ----SLALSLDPYV-------------LSLVLKSCSAIHRSQLGAAIHSHSIKMGFLSNP 93
+ S+D Y+ + V+ +CS + ++G +H+ +K G ++
Sbjct: 249 RSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHI 308
Query: 94 FVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMHVA 153
+ +L+DMY KC AR++FD++ ++NV W +MI Y
Sbjct: 309 KMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGY------------------- 349
Query: 154 PDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKE 213
G +A+ + RM+E ++PN +T L L AC ++ E
Sbjct: 350 --------------GKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYE 395
Query: 214 IHGCSIRNH-IDPHPQLRSGLVEAYGRCGCLINASNVFYNMKER-DVVAWSSLISAYALH 271
I R++ + P + + +V+ GR G L A M ER D W++L+S+ LH
Sbjct: 396 IFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLH 455
Query: 272 GEARSA 277
G A
Sbjct: 456 GNVELA 461
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 151/335 (45%), Gaps = 24/335 (7%)
Query: 77 GAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTH 136
G IH+ IK GF + ++ L+ ++ KC AR++FDE+P+ + +N MIS Y
Sbjct: 53 GKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGYLK 112
Query: 137 SNCVSDALYMFDAMHVA---PDASTFNAIIAGLAGTEDGSAKAIA------FYWRMRELS 187
V + L + M + D T + ++ A GS + + R+ +
Sbjct: 113 HGLVKELLLLVQRMSYSGEKADGYTLSMVLK--ASNSRGSTMILPRSLCRLVHARIIKCD 170
Query: 188 LKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINAS 247
++ + + + AL+ V+ L + + D + + ++ Y G + +A
Sbjct: 171 VELDDVLITALVDTYVKSGKLESARTV----FETMKDENVVCCTSMISGYMNQGFVEDAE 226
Query: 248 NVFYNMKERDVVAWSSLISAYALHGE-ARSALETFHHMEMAKVLPDDITFLAVLKACSHA 306
+F K +D+V +++++ ++ GE A+ +++ + M+ A P+ TF +V+ ACS
Sbjct: 227 EIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVL 286
Query: 307 GLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGA 366
+ A++ + G+ S L+D+ ++ G + +A + M K V +W +
Sbjct: 287 TSHEVGQQVHAQIMKS-GVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEK-NVFSWTS 344
Query: 367 LLGACRTYGEVELA-EIAGR-ALFEIEPDNPANYV 399
++ G E A E+ R F IEP NYV
Sbjct: 345 MIDGYGKNGNPEEALELFTRMKEFRIEP----NYV 375
>AT4G21300.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:11336479-11339052 FORWARD
Length = 857
Score = 235 bits (600), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 130/419 (31%), Positives = 217/419 (51%), Gaps = 35/419 (8%)
Query: 18 NYLRLISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLG 77
N + ++ +T ++ ++ G + +L +F + + +S + L +L + +LG
Sbjct: 402 NSVDVVVFTAMISGYLHNGLYIDSLEMFRWL-VKVKISPNEITLVSILPVIGILLALKLG 460
Query: 78 AAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHS 137
+H IK GF + + CA++DMY KC A ++F+ + +R++V WN+MI+ S
Sbjct: 461 RELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQS 520
Query: 138 NCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLA 197
+ S A+ +F M V+ I + + +++ A
Sbjct: 521 DNPSAAIDIFRQMGVS----------------------GICY-----------DCVSISA 547
Query: 198 LLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERD 257
L AC + S + K IHG I++ + S L++ Y +CG L A NVF MKE++
Sbjct: 548 ALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKN 607
Query: 258 VVAWSSLISAYALHGEARSALETFHHM-EMAKVLPDDITFLAVLKACSHAGLADDALDYF 316
+V+W+S+I+A HG+ + +L FH M E + + PD ITFL ++ +C H G D+ + +F
Sbjct: 608 IVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFF 667
Query: 317 ARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGE 376
M +DYG+QP +HY+C+VD+ RAGRL EAY+ ++ MP WG LLGACR +
Sbjct: 668 RSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKN 727
Query: 377 VELAEIAGRALFEIEPDNPANYVLLARIYASMGRHGEAXXXXXXXXXXGVKVAPGGSWV 435
VELAE+A L +++P N YVL++ +A+ V+ PG SW+
Sbjct: 728 VELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKEREVQKIPGYSWI 786
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 97/397 (24%), Positives = 183/397 (46%), Gaps = 61/397 (15%)
Query: 10 LRIMSYSSNYLRLISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCS 69
R+MS + ++W ++ +V+ G +++L F + +S L D S +L S S
Sbjct: 297 FRMMSRADT----VTWNCMISGYVQSGLMEESLTFFYEMISSGVLP-DAITFSSLLPSVS 351
Query: 70 AIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNA 129
+ IH + ++ + F+ AL+D Y KC A+ +F + +VVV+ A
Sbjct: 352 KFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTA 411
Query: 130 MISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLK 189
MIS Y H+ D+L MF W ++ + +
Sbjct: 412 MISGYLHNGLYIDSLEMFR--------------------------------WLVK-VKIS 438
Query: 190 PNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNV 249
PN ITL+++L + +L + +E+HG I+ D + +++ Y +CG + A +
Sbjct: 439 PNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEI 498
Query: 250 FYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLA 309
F + +RD+V+W+S+I+ A +A++ F M ++ + D ++ A L AC A L
Sbjct: 499 FERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSAC--ANLP 556
Query: 310 DDALDYFARMQQDYGLQPS--SDHY--SCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWG 365
++ F + + ++ S SD Y S L+D+ ++ G L A ++ + M K + +W
Sbjct: 557 SES---FGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEK-NIVSWN 612
Query: 366 ALLGACRTYGEV--------ELAEIAGRALFEIEPDN 394
+++ AC +G++ E+ E +G I PD
Sbjct: 613 SIIAACGNHGKLKDSLCLFHEMVEKSG-----IRPDQ 644
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 122/281 (43%), Gaps = 36/281 (12%)
Query: 25 WTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIHSHS 84
W ++S V+ G QAL F +S D ++K+C A+ + G S +
Sbjct: 106 WNSIISSFVRNGLLNQALA-FYFKMLCFGVSPDVSTFPCLVKACVALKNFK-GIDFLSDT 163
Query: 85 IK-MGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSDA 143
+ +G N FVA +L+ Y + KLFD + Q++ V+WN M++ Y +
Sbjct: 164 VSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSV 223
Query: 144 LYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRACV 203
+ F M RM ++S PN +T +L C
Sbjct: 224 IKGFSVM-------------------------------RMDQIS--PNAVTFDCVLSVCA 250
Query: 204 RMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWSS 263
+++ ++HG + + +D +++ L+ Y +CG +AS +F M D V W+
Sbjct: 251 SKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNC 310
Query: 264 LISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACS 304
+IS Y G +L F+ M + VLPD ITF ++L + S
Sbjct: 311 MISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVS 351
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/350 (22%), Positives = 146/350 (41%), Gaps = 42/350 (12%)
Query: 25 WTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIHSHS 84
W LN + K G + F+ ++ +S + VL C++ LG +H
Sbjct: 207 WNVMLNGYAKCGALDSVIKGFSVMRMD-QISPNAVTFDCVLSVCASKLLIDLGVQLHGLV 265
Query: 85 IKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSDAL 144
+ G + +L+ MY KC A KLF + + + V WN MIS Y S + ++L
Sbjct: 266 VVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESL 325
Query: 145 YMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRACVR 204
F++ M + P+ IT +LL + +
Sbjct: 326 ---------------------------------TFFYEMISSGVLPDAITFSSLLPSVSK 352
Query: 205 MTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWSSL 264
+L K+IH +R+ I L S L++AY +C + A N+F DVV ++++
Sbjct: 353 FENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAM 412
Query: 265 ISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACS---HAGLADDALDYFARMQQ 321
IS Y +G +LE F + K+ P++IT +++L L + + +
Sbjct: 413 ISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKK-- 470
Query: 322 DYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGAC 371
G + ++D+ ++ GR+ AY+I + K + +W +++ C
Sbjct: 471 --GFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLS-KRDIVSWNSMITRC 517
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/323 (22%), Positives = 136/323 (42%), Gaps = 37/323 (11%)
Query: 58 PYVLSLVLKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFD 117
P LSL+L++CS + + G +H+ I + + ++ MY C S K+F
Sbjct: 35 PRRLSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFY 94
Query: 118 EIPQRNVVV--WNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAK 175
+ R + WN++IS + + ++ AL
Sbjct: 95 RLDLRRSSIRPWNSIISSFVRNGLLNQAL------------------------------- 123
Query: 176 AIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVE 235
AFY++M + P++ T L++ACV + + I + +D + + S L++
Sbjct: 124 --AFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIK 181
Query: 236 AYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDIT 295
AY G + S +F + ++D V W+ +++ YA G S ++ F M M ++ P+ +T
Sbjct: 182 AYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVT 241
Query: 296 FLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGM 355
F VL C+ L D + + G+ + L+ + S+ GR +A + R M
Sbjct: 242 FDCVLSVCASKLLIDLGVQLHGLVVVS-GVDFEGSIKNSLLSMYSKCGRFDDASKLFRMM 300
Query: 356 PVKVTVKAWGALLGACRTYGEVE 378
TV W ++ G +E
Sbjct: 301 SRADTV-TWNCMISGYVQSGLME 322
>AT4G21065.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: CRR28
(CHLORORESPIRATORY REDUCTION28); endonuclease
(TAIR:AT1G59720.1); Has 14270 Blast hits to 5372
proteins in 184 species: Archae - 1; Bacteria - 4;
Metazoa - 153; Fungi - 82; Plants - 13714; Viruses - 0;
Other Eukaryotes - 316 (source: NCBI BLink). |
chr4:11245976-11247763 FORWARD
Length = 595
Score = 234 bits (597), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 125/426 (29%), Positives = 227/426 (53%), Gaps = 34/426 (7%)
Query: 11 RIMSYSSNYLRLISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSA 70
++ S + + W + + + G A ++ ++ S + D + ++K+ +
Sbjct: 74 KVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTT 133
Query: 71 IHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAM 130
+ +LG IHS I+ GF S +V +L+ +Y C SA K+FD++P++++V WN++
Sbjct: 134 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSV 193
Query: 131 ISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKP 190
I+ + + +AL A Y M +KP
Sbjct: 194 INGFAENGKPEEAL---------------------------------ALYTEMNSKGIKP 220
Query: 191 NLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVF 250
+ T+++LL AC ++ +L + K +H I+ + + + L++ Y RCG + A +F
Sbjct: 221 DGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLF 280
Query: 251 YNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAK-VLPDDITFLAVLKACSHAGLA 309
M +++ V+W+SLI A++G + A+E F +ME + +LP +ITF+ +L ACSH G+
Sbjct: 281 DEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMV 340
Query: 310 DDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLG 369
+ +YF RM+++Y ++P +H+ C+VD+L+RAG++ +AY+ I+ MP++ V W LLG
Sbjct: 341 KEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLG 400
Query: 370 ACRTYGEVELAEIAGRALFEIEPDNPANYVLLARIYASMGRHGEAXXXXXXXXXXGVKVA 429
AC +G+ +LAE A + ++EP++ +YVLL+ +YAS R + GVK
Sbjct: 401 ACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKV 460
Query: 430 PGGSWV 435
PG S V
Sbjct: 461 PGHSLV 466
>AT3G04750.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:1301391-1303376 REVERSE
Length = 661
Score = 234 bits (597), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 133/409 (32%), Positives = 224/409 (54%), Gaps = 8/409 (1%)
Query: 32 HVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIHSHSIKMG--F 89
+ KQGF +AL ++ + S + D Y + +L C + +LG +H + G +
Sbjct: 207 YAKQGFSLEALKLYFKM-VSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVY 265
Query: 90 LSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSDALYMFDA 149
SN ++ AL+DMY KC + A++ FD + ++++ WN M+ + + A +FD
Sbjct: 266 SSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQ 325
Query: 150 MHVAPDASTFNAIIAGLA--GTEDGSAKAIAFYWRMRELSLKPNLITLLALLRACVRMTS 207
M D ++N+++ G + G + + + + + + E +KP+ +T+++L+
Sbjct: 326 MP-KRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVE-KVKPDRVTMVSLISGAANNGE 383
Query: 208 LNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWSSLISA 267
L+ + +HG IR + L S L++ Y +CG + A VF E+DV W+S+I+
Sbjct: 384 LSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITG 443
Query: 268 YALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQDYGLQP 327
A HG + AL+ F M+ V P+++T LAVL ACSH+GL ++ L F M+ +G P
Sbjct: 444 LAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDP 503
Query: 328 SSDHYSCLVDVLSRAGRLYEAYDII-RGMPVKVTVKAWGALLGACRTYGEVELAEIAGRA 386
++HY LVD+L RAGR+ EA DI+ + MP++ + WG++L ACR ++E AE+A
Sbjct: 504 ETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSACRGGEDIETAELALTE 563
Query: 387 LFEIEPDNPANYVLLARIYASMGRHGEAXXXXXXXXXXGVKVAPGGSWV 435
L ++EP+ YVLL+ IYA++GR G + GVK G S V
Sbjct: 564 LLKLEPEKEGGYVLLSNIYATVGRWGYSDKTREAMENRGVKKTAGYSSV 612
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 143/337 (42%), Gaps = 20/337 (5%)
Query: 80 IHSHSIKMGFLS-NPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSN 138
IH H I G LS ++ +LV Y + + A K+F +P +V +N MI Y
Sbjct: 152 IHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQG 211
Query: 139 CVSDALYMFDAM---HVAPDASTFNAIIAGLAGTEDGS-AKAIAFYWRMRELSLKPNLIT 194
+AL ++ M + PD T +++ D K + + R NLI
Sbjct: 212 FSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLIL 271
Query: 195 LLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMK 254
ALL + + K + + + G V R G + A VF M
Sbjct: 272 SNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFV----RLGDMEAAQAVFDQMP 327
Query: 255 ERDVVAWSSLISAYALHG-EARSALETFHHMEMA-KVLPDDITFLAVLKACSHAGLADDA 312
+RD+V+W+SL+ Y+ G + R+ E F+ M + KV PD +T ++++ ++ G
Sbjct: 328 KRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHG 387
Query: 313 LDYFARMQQDYGLQPSSDHY--SCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGA 370
+ + LQ D + S L+D+ + G + A+ + + K V W +++
Sbjct: 388 RWVHGLVIR---LQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEK-DVALWTSMITG 443
Query: 371 CRTYGEVELA-EIAGRALFEIEPDNPANYVLLARIYA 406
+G + A ++ GR + E P N LLA + A
Sbjct: 444 LAFHGNGQQALQLFGR--MQEEGVTPNNVTLLAVLTA 478
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 90/196 (45%), Gaps = 23/196 (11%)
Query: 117 DEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKA 176
D P ++ ++A+ T+ + A +F P+ +N +I+ ++ +++ +
Sbjct: 65 DTFPMSRLIFFSAI----TYPENLDLAKLLFLNFTPNPNVFVYNTMISAVSSSKN---EC 117
Query: 177 IAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIH------GC-SIRNHIDPHPQL 229
Y M + P+ T L L++A + L+ +K+IH GC S+ N+ L
Sbjct: 118 FGLYSSMIRHRVSPDRQTFLYLMKAS---SFLSEVKQIHCHIIVSGCLSLGNY------L 168
Query: 230 RSGLVEAYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKV 289
+ LV+ Y G A VF M DV +++ +I YA G + AL+ + M +
Sbjct: 169 WNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGI 228
Query: 290 LPDDITFLAVLKACSH 305
PD+ T L++L C H
Sbjct: 229 EPDEYTVLSLLVCCGH 244
>AT2G22410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9509035-9511080 FORWARD
Length = 681
Score = 233 bits (595), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 132/414 (31%), Positives = 219/414 (52%), Gaps = 3/414 (0%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
L+SW +N + K G ++A+ V+ +++ D ++ LV SCS + G +
Sbjct: 222 LVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLV-SSCSMLGDLNRGKEFY 280
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVS 141
+ + G + AL+DM+ KC AR++FD + +R +V W MIS Y +
Sbjct: 281 EYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLD 340
Query: 142 DALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRA 201
+ +FD M D +NA+I G + G A+A + M+ + KP+ IT++ L A
Sbjct: 341 VSRKLFDDME-EKDVVLWNAMIGGSVQAKRGQ-DALALFQEMQTSNTKPDEITMIHCLSA 398
Query: 202 CVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAW 261
C ++ +L++ IH + + + L + LV+ Y +CG + A +VF+ ++ R+ + +
Sbjct: 399 CSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTY 458
Query: 262 SSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQ 321
+++I ALHG+A +A+ F+ M A + PD+ITF+ +L AC H G+ DYF++M+
Sbjct: 459 TAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKS 518
Query: 322 DYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVELAE 381
+ L P HYS +VD+L RAG L EA ++ MP++ WGALL CR +G VEL E
Sbjct: 519 RFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGE 578
Query: 382 IAGRALFEIEPDNPANYVLLARIYASMGRHGEAXXXXXXXXXXGVKVAPGGSWV 435
A + L E++P + YVLL +Y +A GV+ PG S +
Sbjct: 579 KAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSI 632
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/390 (24%), Positives = 176/390 (45%), Gaps = 20/390 (5%)
Query: 2 FCEAKLNQLRIMSYSSNYLR------LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALS 55
FC L++ R + YS L+ + SW + + +++ +++ +
Sbjct: 94 FC--ALSESRYLDYSVKILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCE 151
Query: 56 LDP--YVLSLVLKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSAR 113
P + ++ K C+ + S LG I H +K+ V A + M+ C +AR
Sbjct: 152 SRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENAR 211
Query: 114 KLFDEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMH---VAPDASTFNAIIAGLAGTE 170
K+FDE P R++V WN +I+ Y A+Y++ M V PD T +++ +
Sbjct: 212 KVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLG 271
Query: 171 DGSAKAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLR 230
D + + FY ++E L+ + + AL+ + ++ + I + I +
Sbjct: 272 DLN-RGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMI 330
Query: 231 SGLVEAYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVL 290
SG Y RCG L + +F +M+E+DVV W+++I + AL F M+ +
Sbjct: 331 SG----YARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTK 386
Query: 291 PDDITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYD 350
PD+IT + L ACS G D + + R + Y L + + LVD+ ++ G + EA
Sbjct: 387 PDEITMIHCLSACSQLGALDVGI-WIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALS 445
Query: 351 IIRGMPVKVTVKAWGALLGACRTYGEVELA 380
+ G+ + ++ + A++G +G+ A
Sbjct: 446 VFHGIQTRNSL-TYTAIIGGLALHGDASTA 474
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 119/240 (49%), Gaps = 12/240 (5%)
Query: 154 PDASTFNAIIAGLAGTEDGSAKAIAFYWRMRE--LSLKPNLITLLALLRAC--VRMTSLN 209
P+ ++N I G + +E+ + + +R +P+ T L + C +R++SL
Sbjct: 116 PNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLG 175
Query: 210 MIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWSSLISAYA 269
+ H +R + H + + + + CG + NA VF RD+V+W+ LI+ Y
Sbjct: 176 HMILGHVLKLRLELVSH--VHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYK 233
Query: 270 LHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSS 329
GEA A+ + ME V PDD+T + ++ +CS G + +++ ++++ GL+ +
Sbjct: 234 KIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKEN-GLRMTI 292
Query: 330 DHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVELAEIAGRALFE 389
+ L+D+ S+ G ++EA I + K T+ +W ++ Y L +++ R LF+
Sbjct: 293 PLVNALMDMFSKCGDIHEARRIFDNLE-KRTIVSWTTMISG---YARCGLLDVS-RKLFD 347
>AT1G77170.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28998133-28999536 REVERSE
Length = 467
Score = 233 bits (595), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 126/387 (32%), Positives = 205/387 (52%), Gaps = 36/387 (9%)
Query: 25 WTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIHSHS 84
W + S+++ A+ V+ + S L D Y L +V+K+ IH LG +HS +
Sbjct: 85 WNNIMRSYIRHESPLDAIQVYLGMVRSTVLP-DRYSLPIVIKAAVQIHDFTLGKELHSVA 143
Query: 85 IKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSDAL 144
+++GF+ + F + +Y K +ARK+FDE P+R + WNA+I H
Sbjct: 144 VRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNH-------- 195
Query: 145 YMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRACVR 204
AG A +A+ + M+ L+P+ T++++ +C
Sbjct: 196 -------------------AGRAN------EAVEMFVDMKRSGLEPDDFTMVSVTASCGG 230
Query: 205 MTSLNMIKEIHGCSIRNHIDPHPQLR--SGLVEAYGRCGCLINASNVFYNMKERDVVAWS 262
+ L++ ++H C ++ + + + L++ YG+CG + AS++F M++R+VV+WS
Sbjct: 231 LGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWS 290
Query: 263 SLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQD 322
S+I YA +G ALE F M V P+ ITF+ VL AC H GL ++ YFA M+ +
Sbjct: 291 SMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTYFAMMKSE 350
Query: 323 YGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVELAEI 382
+ L+P HY C+VD+LSR G+L EA ++ MP+K V WG L+G C +G+VE+AE
Sbjct: 351 FELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEKFGDVEMAEW 410
Query: 383 AGRALFEIEPDNPANYVLLARIYASMG 409
+ E+EP N YV+LA +YA G
Sbjct: 411 VAPYMVELEPWNDGVYVVLANVYALRG 437
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 114/283 (40%), Gaps = 41/283 (14%)
Query: 1 MFCEA-KLNQLRIMSYSSNYLRLISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPY 59
++C+A + R + + +L SW + G +A+ +F ++ S L D +
Sbjct: 161 LYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRS-GLEPDDF 219
Query: 60 VLSLVLKSCSAIHRSQLGAAIHSHSI--KMGFLSNPFVACALVDMYGKCVSTFSARKLFD 117
+ V SC + L +H + K S+ + +L+DMYGKC A +F+
Sbjct: 220 TMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFE 279
Query: 118 EIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAI 177
E+ QRNVV W++MI Y + +AL F
Sbjct: 280 EMRQRNVVSWSSMIVGYAANGNTLEALECFR----------------------------- 310
Query: 178 AFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLR--SGLVE 235
+MRE ++PN IT + +L ACV L + + +++ + P L +V+
Sbjct: 311 ----QMREFGVRPNKITFVGVLSACVH-GGLVEEGKTYFAMMKSEFELEPGLSHYGCIVD 365
Query: 236 AYGRCGCLINASNVFYNMKER-DVVAWSSLISAYALHGEARSA 277
R G L A V M + +V+ W L+ G+ A
Sbjct: 366 LLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEKFGDVEMA 408
>AT1G06140.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:1864796-1866472 FORWARD
Length = 558
Score = 233 bits (594), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 131/386 (33%), Positives = 204/386 (52%), Gaps = 35/386 (9%)
Query: 25 WTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIHSHS 84
W + ++K + +F ++ + L+LD L ++K+C + ++G +H S
Sbjct: 178 WGVLMKGYLKYSKDPEVFRLFCLMRDT-GLALDALTLICLVKACGNVFAGKVGKCVHGVS 236
Query: 85 IKMGFL-SNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSDA 143
I+ F+ + ++ +++DMY KC +ARKLF+ RNVV+W +IS + +A
Sbjct: 237 IRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEA 296
Query: 144 LYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRACV 203
+F M +RE S+ PN TL A+L +C
Sbjct: 297 FDLFRQM--------------------------------LRE-SILPNQCTLAAILVSCS 323
Query: 204 RMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWSS 263
+ SL K +HG IRN I+ + ++ Y RCG + A VF M ER+V++WSS
Sbjct: 324 SLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSS 383
Query: 264 LISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQDY 323
+I+A+ ++G AL+ FH M+ V+P+ +TF+++L ACSH+G + F M +DY
Sbjct: 384 MINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDY 443
Query: 324 GLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVELAEIA 383
G+ P +HY+C+VD+L RAG + EA I MPVK AWGALL ACR + EV+LA
Sbjct: 444 GVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEI 503
Query: 384 GRALFEIEPDNPANYVLLARIYASMG 409
L +EP+ + YVLL+ IYA G
Sbjct: 504 AEKLLSMEPEKSSVYVLLSNIYADAG 529
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 125/277 (45%), Gaps = 40/277 (14%)
Query: 7 LNQLRIMSYSSNYLRLISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPY--VLSLV 64
L+ R + +S ++ WT ++ K ++A+ F+ + L S+ P L+ +
Sbjct: 262 LDNARKLFETSVDRNVVMWTTLISGFAK---CERAVEAFDLFRQMLRESILPNQCTLAAI 318
Query: 65 LKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNV 124
L SCS++ + G ++H + I+ G + + +DMY +C + AR +FD +P+RNV
Sbjct: 319 LVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNV 378
Query: 125 VVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMR 184
+ W++MI+ + + +AL D H +M+
Sbjct: 379 ISWSSMINAFGINGLFEEAL---DCFH------------------------------KMK 405
Query: 185 ELSLKPNLITLLALLRACVRMTSLNM-IKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCL 243
++ PN +T ++LL AC ++ K+ + + P + + +V+ GR G +
Sbjct: 406 SQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEI 465
Query: 244 INASNVFYNMKERDVV-AWSSLISAYALHGEARSALE 279
A + NM + + AW +L+SA +H E A E
Sbjct: 466 GEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAGE 502
>AT1G11290.1 | Symbols: CRR22 | CRR22 (CHLORORESPIRATORY
REDUCTION22); endonuclease | chr1:3791454-3793883
REVERSE
Length = 809
Score = 232 bits (592), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 131/416 (31%), Positives = 217/416 (52%), Gaps = 38/416 (9%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLV--LKSCSAIHRSQLGAA 79
++SW ++++V+ ++A+++F Q L + P +S++ L +C+ + + G
Sbjct: 302 VVSWNSMIDAYVQNENPKEAMLIF---QKMLDEGVKPTDVSVMGALHACADLGDLERGRF 358
Query: 80 IHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNC 139
IH S+++G N V +L+ MY KC +A +F ++ R +V WNAMI + +
Sbjct: 359 IHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGR 418
Query: 140 VSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALL 199
DAL F +MR ++KP+ T ++++
Sbjct: 419 PIDALNYFS---------------------------------QMRSRTVKPDTFTYVSVI 445
Query: 200 RACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVV 259
A ++ + K IHG +R+ +D + + + LV+ Y +CG ++ A +F M ER V
Sbjct: 446 TAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVT 505
Query: 260 AWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARM 319
W+++I Y HG ++ALE F M+ + P+ +TFL+V+ ACSH+GL + L F M
Sbjct: 506 TWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMM 565
Query: 320 QQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVEL 379
+++Y ++ S DHY +VD+L RAGRL EA+D I MPVK V +GA+LGAC+ + V
Sbjct: 566 KENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNF 625
Query: 380 AEIAGRALFEIEPDNPANYVLLARIYASMGRHGEAXXXXXXXXXXGVKVAPGGSWV 435
AE A LFE+ PD+ +VLLA IY + + G++ PG S V
Sbjct: 626 AEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMV 681
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 148/311 (47%), Gaps = 37/311 (11%)
Query: 59 YVLSLVLKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDE 118
Y + +LK C ++G IH +K GF + F L +MY KC ARK+FD
Sbjct: 136 YNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDR 195
Query: 119 IPQRNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAK-AI 177
+P+R++V W N I+AG +++G A+ A+
Sbjct: 196 MPERDLVSW--------------------------------NTIVAGY--SQNGMARMAL 221
Query: 178 AFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAY 237
M E +LKP+ IT++++L A + +++ KEIHG ++R+ D + + LV+ Y
Sbjct: 222 EMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMY 281
Query: 238 GRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFL 297
+CG L A +F M ER+VV+W+S+I AY + + A+ F M V P D++ +
Sbjct: 282 AKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVM 341
Query: 298 AVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPV 357
L AC+ G + + ++ + GL + + L+ + + + A + +
Sbjct: 342 GALHACADLGDLERG-RFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQS 400
Query: 358 KVTVKAWGALL 368
+ T+ +W A++
Sbjct: 401 R-TLVSWNAMI 410
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 90/360 (25%), Positives = 172/360 (47%), Gaps = 48/360 (13%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLV--LKSCSAIHRSQLGAA 79
L+SW + + + G + AL + +++ +L P +++V L + SA+ +G
Sbjct: 201 LVSWNTIVAGYSQNGMARMALEM---VKSMCEENLKPSFITIVSVLPAVSALRLISVGKE 257
Query: 80 IHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNC 139
IH ++++ GF S ++ ALVDMY KC S +AR+LFD + +RNVV WN+MI Y +
Sbjct: 258 IHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNEN 317
Query: 140 VSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALL 199
+A+ +F +M + +KP ++++ L
Sbjct: 318 PKEAMLIFQ---------------------------------KMLDEGVKPTDVSVMGAL 344
Query: 200 RACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVV 259
AC + L + IH S+ +D + + + L+ Y +C + A+++F ++ R +V
Sbjct: 345 HACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLV 404
Query: 260 AWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARM 319
+W+++I +A +G AL F M V PD T+++V+ A +A+ ++ + A+
Sbjct: 405 SWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITA-----IAELSITHHAKW 459
Query: 320 QQDYGLQPSSDH----YSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYG 375
++ D + LVD+ ++ G + A +I M + V W A++ T+G
Sbjct: 460 IHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIA-RLIFDMMSERHVTTWNAMIDGYGTHG 518
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 116/241 (48%), Gaps = 4/241 (1%)
Query: 130 MISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLK 189
++SL+ V +A +F+ + + ++ ++ G A D KA+ F+ RMR ++
Sbjct: 75 LVSLFCRYGSVDEAARVFEPIDSKLNV-LYHTMLKGFAKVSDLD-KALQFFVRMRYDDVE 132
Query: 190 PNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNV 249
P + LL+ C L + KEIHG +++ +GL Y +C + A V
Sbjct: 133 PVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKV 192
Query: 250 FYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLA 309
F M ERD+V+W+++++ Y+ +G AR ALE M + P IT ++VL A S L
Sbjct: 193 FDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLI 252
Query: 310 DDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLG 369
+ + G + + LVD+ ++ G L A + GM ++ V +W +++
Sbjct: 253 SVGKEIHGYAMRS-GFDSLVNISTALVDMYAKCGSLETARQLFDGM-LERNVVSWNSMID 310
Query: 370 A 370
A
Sbjct: 311 A 311
>AT1G74630.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28030521-28032452 FORWARD
Length = 643
Score = 231 bits (589), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 129/385 (33%), Positives = 208/385 (54%), Gaps = 32/385 (8%)
Query: 57 DPYVLSLVLKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLF 116
D + + V+K+ + G +H ++K G S+ FV L+ MYG C ARK+F
Sbjct: 105 DSFSFAFVIKAVENFRSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVF 164
Query: 117 DEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAG-LAGTEDGSAK 175
DE+ Q N+V WNA+I+ N V+ A +FD M V + +++N ++AG + E SAK
Sbjct: 165 DEMHQPNLVAWNAVITACFRGNDVAGAREIFDKMLVR-NHTSWNVMLAGYIKAGELESAK 223
Query: 176 AI-----------------------------AFYWRMRELSLKPNLITLLALLRACVRMT 206
I ++ ++ + PN ++L +L AC +
Sbjct: 224 RIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSG 283
Query: 207 SLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKE-RDVVAWSSLI 265
S K +HG + + + L++ Y RCG + A VF M+E R +V+W+S+I
Sbjct: 284 SFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMI 343
Query: 266 SAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQDYGL 325
+ A+HG+ A+ F+ M V PD I+F+++L ACSHAGL ++ DYF+ M++ Y +
Sbjct: 344 AGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHI 403
Query: 326 QPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVELAEIAGR 385
+P +HY C+VD+ R+G+L +AYD I MP+ T W LLGAC ++G +ELAE +
Sbjct: 404 EPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQ 463
Query: 386 ALFEIEPDNPANYVLLARIYASMGR 410
L E++P+N + VLL+ YA+ G+
Sbjct: 464 RLNELDPNNSGDLVLLSNAYATAGK 488
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/289 (20%), Positives = 118/289 (40%), Gaps = 63/289 (21%)
Query: 154 PDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKE 213
PDA FN ++ G + +++ F MR+ + P+ + +++A SL +
Sbjct: 68 PDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQ 127
Query: 214 IHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGE 273
+H ++++ ++ H + + L+ YG CGC+ A VF M + ++VAW+++I+A +
Sbjct: 128 MHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGND 187
Query: 274 ARSALETFHHM---------------------EMAKVL------PDDITFLAVLKACSHA 306
A E F M E AK + DD+++ ++ +H
Sbjct: 188 VAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHN 247
Query: 307 GLADDALDYFARMQQDYGLQPSSDHYS--------------------------------- 333
G +++ YF +Q+ G+ P+ +
Sbjct: 248 GSFNESFLYFRELQRA-GMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSV 306
Query: 334 --CLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVELA 380
L+D+ SR G + A + GM K + +W +++ +G+ E A
Sbjct: 307 NNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEA 355
>AT2G40720.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:16987269-16989851 FORWARD
Length = 860
Score = 230 bits (586), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 123/418 (29%), Positives = 212/418 (50%), Gaps = 40/418 (9%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSL-ALSLDPYVLSLVLKSCSAIHRSQLGAAI 80
+++W ++ K G ++AL VF ++ +L D +++ V +C+ + + G +
Sbjct: 439 MVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQV 498
Query: 81 HSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCV 140
H IK G + N FV +L+D+Y KC A K+F + N+V WN+MIS Y+ +N
Sbjct: 499 HGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLP 558
Query: 141 SDALYMFDAM---HVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLA 197
++ +F+ M + PD+ + +++ ++ T +
Sbjct: 559 ELSIDLFNLMLSQGIFPDSVSITSVLVAISSTA--------------------------S 592
Query: 198 LLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERD 257
LL+ K +HG ++R I L++ L++ Y +CG A N+F M+ +
Sbjct: 593 LLKG----------KSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKS 642
Query: 258 VVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFA 317
++ W+ +I Y HG+ +AL F M+ A PDD+TFL+++ AC+H+G ++ + F
Sbjct: 643 LITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFE 702
Query: 318 RMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEV 377
M+QDYG++P+ +HY+ +VD+L RAG L EAY I+ MP++ W LL A RT+ V
Sbjct: 703 FMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNV 762
Query: 378 ELAEIAGRALFEIEPDNPANYVLLARIYASMGRHGEAXXXXXXXXXXGVKVAPGGSWV 435
EL ++ L +EP+ + YV L +Y G EA G+ PG SW+
Sbjct: 763 ELGILSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGCSWI 820
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 137/309 (44%), Gaps = 43/309 (13%)
Query: 65 LKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNV 124
L +CS S G IH +KMG ++P+V +L+ MY KC A +F + + +
Sbjct: 279 LGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRL 338
Query: 125 VVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMR 184
+WNAM++ Y ++ AL +F M R
Sbjct: 339 EIWNAMVAAYAENDYGYSALDLFGFM---------------------------------R 365
Query: 185 ELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLI 244
+ S+ P+ TL ++ C + N K +H + I + S L+ Y +CGC
Sbjct: 366 QKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDP 425
Query: 245 NASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHM--EMAKVLPDDITFLAVLKA 302
+A VF +M+E+D+VAW SLIS +G+ + AL+ F M + + PD +V A
Sbjct: 426 DAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNA 485
Query: 303 CSHAGLADDALDYFARMQQDY---GLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKV 359
C AGL +AL + ++ GL + S L+D+ S+ G A + M +
Sbjct: 486 C--AGL--EALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTEN 541
Query: 360 TVKAWGALL 368
V AW +++
Sbjct: 542 MV-AWNSMI 549
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/393 (23%), Positives = 170/393 (43%), Gaps = 49/393 (12%)
Query: 21 RLISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAI 80
RL W + ++ + + AL +F ++ L D + LS V+ CS + G ++
Sbjct: 337 RLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLP-DSFTLSNVISCCSVLGLYNYGKSV 395
Query: 81 HSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCV 140
H+ K S + AL+ +Y KC A +F + ++++V W ++IS +
Sbjct: 396 HAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKF 455
Query: 141 SDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLR 200
+AL +F M D SLKP+ + ++
Sbjct: 456 KEALKVFGDMKDDDD-------------------------------SLKPDSDIMTSVTN 484
Query: 201 ACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVA 260
AC + +L ++HG I+ + + + S L++ Y +CG A VF +M ++VA
Sbjct: 485 ACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVA 544
Query: 261 WSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAG--LADDAL-DYFA 317
W+S+IS Y+ + +++ F+ M + PD ++ +VL A S L +L Y
Sbjct: 545 WNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTL 604
Query: 318 RMQQDYGLQPSSDHY-SCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGE 376
R+ G+ PS H + L+D+ + G A +I + M K + W ++ ++G+
Sbjct: 605 RL----GI-PSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLI-TWNLMIYGYGSHGD 658
Query: 377 VELAEIAGRALFE---IEPDNPANYVLLARIYA 406
I +LF+ ++P + L+ I A
Sbjct: 659 C----ITALSLFDEMKKAGESPDDVTFLSLISA 687
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/364 (23%), Positives = 155/364 (42%), Gaps = 40/364 (10%)
Query: 25 WTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSC--SAIHRSQLGAAIHS 82
W ++ + K ++ + F + + D + LS+V+ R + G IH
Sbjct: 136 WNSMIDGYFKFRRFKEGVGCFRRMLV-FGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHG 194
Query: 83 HSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQR-NVVVWNAMISLYTHSNCVS 141
++ ++ F+ AL+DMY K + A ++F EI + NVV+WN MI + S
Sbjct: 195 FMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICE 254
Query: 142 DALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRA 201
+L + Y + S+K + L A
Sbjct: 255 SSLDL---------------------------------YMLAKNNSVKLVSTSFTGALGA 281
Query: 202 CVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAW 261
C + + ++IH ++ + P + + L+ Y +CG + A VF + ++ + W
Sbjct: 282 CSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIW 341
Query: 262 SSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQ 321
+++++AYA + SAL+ F M VLPD T V+ CS GL + A + +
Sbjct: 342 NAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFK 401
Query: 322 DYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALL-GACRTYGEVELA 380
+Q +S S L+ + S+ G +AY + + M K V AWG+L+ G C+ E
Sbjct: 402 R-PIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMV-AWGSLISGLCKNGKFKEAL 459
Query: 381 EIAG 384
++ G
Sbjct: 460 KVFG 463
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 90/372 (24%), Positives = 164/372 (44%), Gaps = 59/372 (15%)
Query: 16 SSNYLRLISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQ 75
+ +Y+ S + + +++G + QAL +++ S + +LK+CSA+
Sbjct: 18 ADSYISPASINSGIRALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLS 77
Query: 76 LGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQ-------RNVVVWN 128
G IH + +G+ +PF+A +LV+MY KC A ++FD Q R+V VWN
Sbjct: 78 YGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWN 137
Query: 129 AMISLYTHSNCVSDALYMFDAM---HVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRE 185
+MI Y + + F M V PDA + + +++ + ++G+ + RE
Sbjct: 138 SMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMC--KEGNFR--------RE 187
Query: 186 LSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLIN 245
K+IHG +RN +D L++ L++ Y + G I+
Sbjct: 188 EG------------------------KQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSID 223
Query: 246 ASNVFYNMKER-DVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACS 304
A VF ++++ +VV W+ +I + G S+L+ + + V +F L ACS
Sbjct: 224 AWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACS 283
Query: 305 HAGLADDALDYFARMQQ----DYGLQPSSDHYSC--LVDVLSRAGRLYEAYDIIRGMPVK 358
+ + F R GL +D Y C L+ + S+ G + EA + + V
Sbjct: 284 QSENSG-----FGRQIHCDVVKMGLH--NDPYVCTSLLSMYSKCGMVGEA-ETVFSCVVD 335
Query: 359 VTVKAWGALLGA 370
++ W A++ A
Sbjct: 336 KRLEIWNAMVAA 347
>AT4G18750.1 | Symbols: DOT4 | DOT4 (DEFECTIVELY ORGANIZED
TRIBUTARIES 4) | chr4:10304850-10307465 FORWARD
Length = 871
Score = 230 bits (586), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 122/416 (29%), Positives = 218/416 (52%), Gaps = 37/416 (8%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
++S+T + + ++G +A+ +F ++ +S D Y ++ VL C+ G +H
Sbjct: 362 VVSYTSMIAGYAREGLAGEAVKLFEEMEEE-GISPDVYTVTAVLNCCARYRLLDEGKRVH 420
Query: 82 S--HSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNC 139
+GF + FV+ AL+DMY KC S A +F E+ ++++ WN +I Y+ +
Sbjct: 421 EWIKENDLGF--DIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCY 478
Query: 140 VSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALL 199
++AL +F+ + + E P+ T+ +L
Sbjct: 479 ANEALSLFNLL--------------------------------LEEKRFSPDERTVACVL 506
Query: 200 RACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVV 259
AC +++ + +EIHG +RN + + LV+ Y +CG L+ A +F ++ +D+V
Sbjct: 507 PACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLV 566
Query: 260 AWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARM 319
+W+ +I+ Y +HG + A+ F+ M A + D+I+F+++L ACSH+GL D+ +F M
Sbjct: 567 SWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIM 626
Query: 320 QQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVEL 379
+ + ++P+ +HY+C+VD+L+R G L +AY I MP+ WGALL CR + +V+L
Sbjct: 627 RHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKL 686
Query: 380 AEIAGRALFEIEPDNPANYVLLARIYASMGRHGEAXXXXXXXXXXGVKVAPGGSWV 435
AE +FE+EP+N YVL+A IYA + + G++ PG SW+
Sbjct: 687 AEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWI 742
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 156/347 (44%), Gaps = 38/347 (10%)
Query: 25 WTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIHSHS 84
W +N K G ++ +F + +S + +D Y S V KS S++ G +H
Sbjct: 163 WNILMNELAKSGDFSGSIGLFKKMMSS-GVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFI 221
Query: 85 IKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSDAL 144
+K GF V +LV Y K SARK+FDE+ +R+V+ WN++I+ Y + L
Sbjct: 222 LKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGL 281
Query: 145 YMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRACVR 204
+F M V+ ++ +L T++++ C
Sbjct: 282 SVFVQMLVS---------------------------------GIEIDLATIVSVFAGCAD 308
Query: 205 MTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWSSL 264
+++ + +H ++ + + L++ Y +CG L +A VF M +R VV+++S+
Sbjct: 309 SRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSM 368
Query: 265 ISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQ-DY 323
I+ YA G A A++ F ME + PD T AVL C+ L D+ +++ D
Sbjct: 369 IAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDL 428
Query: 324 GLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGA 370
G + L+D+ ++ G + EA + M VK + +W ++G
Sbjct: 429 GFDIFVSN--ALMDMYAKCGSMQEAELVFSEMRVKDII-SWNTIIGG 472
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/361 (25%), Positives = 161/361 (44%), Gaps = 49/361 (13%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
+ISW +N +V G ++ L VF + S + +D + V C+ LG A+H
Sbjct: 261 VISWNSIINGYVSNGLAEKGLSVFVQMLVS-GIEIDLATIVSVFAGCADSRLISLGRAVH 319
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVS 141
S +K F L+DMY KC SA+ +F E+ R+VV + +MI+ Y
Sbjct: 320 SIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYARE---- 375
Query: 142 DALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRA 201
GLAG +A+ + M E + P++ T+ A+L
Sbjct: 376 -----------------------GLAG------EAVKLFEEMEEEGISPDVYTVTAVLNC 406
Query: 202 CVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAW 261
C R L+ K +H N + + + L++ Y +CG + A VF M+ +D+++W
Sbjct: 407 CARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISW 466
Query: 262 SSLISAYALHGEARSALETFH-HMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQ 320
+++I Y+ + A AL F+ +E + PD+ T VL AC+ +L F + +
Sbjct: 467 NTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACA-------SLSAFDKGR 519
Query: 321 QDYGLQPSSDHYS------CLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTY 374
+ +G + ++S LVD+ ++ G L A+ + + K V +W ++ +
Sbjct: 520 EIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLV-SWTVMIAGYGMH 578
Query: 375 G 375
G
Sbjct: 579 G 579
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 80/356 (22%), Positives = 143/356 (40%), Gaps = 54/356 (15%)
Query: 56 LDPYVLSLVLKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKL 115
+DP L VL+ C+ + G + + GF+ + + L MY C A ++
Sbjct: 92 IDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRV 151
Query: 116 FDEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAM---HVAPDASTFNAIIAGLAGTEDG 172
FDE+ + WN +++ S S ++ +F M V D+ TF+ + +
Sbjct: 152 FDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSS---- 207
Query: 173 SAKAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSG 232
+ S++ +++HG +++ + +
Sbjct: 208 --------------------------------LRSVHGGEQLHGFILKSGFGERNSVGNS 235
Query: 233 LVEAYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPD 292
LV Y + + +A VF M ERDV++W+S+I+ Y +G A L F M ++ + D
Sbjct: 236 LVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEID 295
Query: 293 DITFLAVLKACSHAGLADDALDYFARMQQDYGLQ---PSSDHY-SCLVDVLSRAGRLYEA 348
T ++V AG AD L R G++ D + + L+D+ S+ G L A
Sbjct: 296 LATIVSVF-----AGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSA 350
Query: 349 YDIIRGMPVKVTVKAWGALLGACRTYGEVELAEIAGRALFEIEPD--NPANYVLLA 402
+ R M + V + G Y LA A + E+E + +P Y + A
Sbjct: 351 KAVFREMSDRSVVSYTSMIAG----YAREGLAGEAVKLFEEMEEEGISPDVYTVTA 402
>AT1G03540.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:883782-885611 FORWARD
Length = 609
Score = 229 bits (585), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 127/415 (30%), Positives = 208/415 (50%), Gaps = 38/415 (9%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
+I WT L++ K +++AL +F + L D VL +C + R + G IH
Sbjct: 229 VICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIH 288
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVS 141
I G SN V +L+DMYGKC S AR++F+ + ++N V W+A++ Y
Sbjct: 289 GKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQ----- 343
Query: 142 DALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRA 201
+ H KAI + M E +L +L+A
Sbjct: 344 ------NGEH----------------------EKAIEIFREMEE----KDLYCFGTVLKA 371
Query: 202 CVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAW 261
C + ++ + KEIHG +R + + S L++ YG+ GC+ +AS V+ M R+++ W
Sbjct: 372 CAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITW 431
Query: 262 SSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQ 321
++++SA A +G A+ F+ M + PD I+F+A+L AC H G+ D+ +YF M +
Sbjct: 432 NAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAK 491
Query: 322 DYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEV-ELA 380
YG++P ++HYSC++D+L RAG EA +++ + WG LLG C + +A
Sbjct: 492 SYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDASLWGVLLGPCAANADASRVA 551
Query: 381 EIAGRALFEIEPDNPANYVLLARIYASMGRHGEAXXXXXXXXXXGVKVAPGGSWV 435
E + + E+EP +YVLL+ +Y ++GRHG+A GV G SW+
Sbjct: 552 ERIAKRMMELEPKYHMSYVLLSNMYKAIGRHGDALNIRKLMVRRGVAKTVGQSWI 606
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 110/365 (30%), Positives = 168/365 (46%), Gaps = 53/365 (14%)
Query: 23 ISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIHS 82
ISWT ++ +V H +AL VF + S L + + LS +K+CS + +LG H
Sbjct: 129 ISWTSMMSGYVTGKEHVKALEVFVEM-VSFGLDANEFTLSSAVKACSELGEVRLGRCFHG 187
Query: 83 HSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSD 142
I GF N F++ L +YG AR++FDE+P+ +V+ W A++S ++ ++ +
Sbjct: 188 VVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEE 247
Query: 143 ALYMFDAMH----VAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLAL 198
AL +F AMH + PD STF +
Sbjct: 248 ALGLFYAMHRGKGLVPDGSTFGTV------------------------------------ 271
Query: 199 LRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDV 258
L AC + L KEIHG I N I + + S L++ YG+CG + A VF M +++
Sbjct: 272 LTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNS 331
Query: 259 VAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFAR 318
V+WS+L+ Y +GE A+E F ME D F VLKAC AGLA A+
Sbjct: 332 VSWSALLGGYCQNGEHEKAIEIFREMEE----KDLYCFGTVLKAC--AGLA--AVRLGKE 383
Query: 319 MQQDY---GLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYG 375
+ Y G + S L+D+ ++G + A + M ++ + W A+L A G
Sbjct: 384 IHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMI-TWNAMLSALAQNG 442
Query: 376 EVELA 380
E A
Sbjct: 443 RGEEA 447
>AT5G37570.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:14924494-14926146 REVERSE
Length = 550
Score = 229 bits (585), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 135/463 (29%), Positives = 224/463 (48%), Gaps = 66/463 (14%)
Query: 37 FHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVA 96
F + ++ ++T LA D Y LV+K CS + ++G+++H +++GF + V
Sbjct: 90 FFETVSILMRMMRTGLARP-DEYTFPLVMKVCSNNGQVRVGSSVHGLVLRIGFDKDVVVG 148
Query: 97 CALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHS------------------- 137
+ VD YGKC FSARK+F E+P+RN V W A++ Y S
Sbjct: 149 TSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYVKSGELEEAKSMFDLMPERNLG 208
Query: 138 --NCVSDALY----------MFDAMHVAPDASTFNAIIAGLAGTED-------------- 171
N + D L +FD M D ++ ++I G A D
Sbjct: 209 SWNALVDGLVKSGDLVNAKKLFDEMP-KRDIISYTSMIDGYAKGGDMVSARDLFEEARGV 267
Query: 172 ----------GSAK------AIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIH 215
G A+ A + M ++KP+ ++ L+ AC +M + +++
Sbjct: 268 DVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVD 327
Query: 216 GC--SIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGE 273
N H + L++ +CG + A+ +F M +RD+V++ S++ A+HG
Sbjct: 328 SYLHQRMNKFSSH-YVVPALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGC 386
Query: 274 ARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYS 333
A+ F M ++PD++ F +LK C + L ++ L YF M++ Y + S DHYS
Sbjct: 387 GSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSRLVEEGLRYFELMRKKYSILASPDHYS 446
Query: 334 CLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVELAEIAGRALFEIEPD 393
C+V++LSR G+L EAY++I+ MP + AWG+LLG C +G E+AE+ R LFE+EP
Sbjct: 447 CIVNLLSRTGKLKEAYELIKSMPFEAHASAWGSLLGGCSLHGNTEIAEVVARHLFELEPQ 506
Query: 394 NPANYVLLARIYASMGRHGEAXXXXXXXXXXGVKVAPGGSWVT 436
+ +YVLL+ IYA++ R + G+ G SW++
Sbjct: 507 SAGSYVLLSNIYAALDRWTDVAHLRDKMNENGITKICGRSWIS 549
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 110/266 (41%), Gaps = 41/266 (15%)
Query: 24 SWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIHSH 83
+W+ + + + G +A VF+ + + + D +++ ++ +CS + +L + S+
Sbjct: 271 AWSALILGYAQNGQPNEAFKVFSEM-CAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSY 329
Query: 84 -SIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSD 142
+M S+ +V AL+DM KC A KLF+E+PQR++V + +M+ C S+
Sbjct: 330 LHQRMNKFSSHYVVPALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSE 389
Query: 143 ALYMFDAM---HVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALL 199
A+ +F+ M + PD F I+ + G + + ++ MR+
Sbjct: 390 AIRLFEKMVDEGIVPDEVAFTVILK-VCGQSRLVEEGLRYFELMRK-------------- 434
Query: 200 RACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMK-ERDV 258
+ I P S +V R G L A + +M E
Sbjct: 435 --------------------KYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHA 474
Query: 259 VAWSSLISAYALHGEARSALETFHHM 284
AW SL+ +LHG A H+
Sbjct: 475 SAWGSLLGGCSLHGNTEIAEVVARHL 500
>AT1G17630.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:6064525-6066720 FORWARD
Length = 731
Score = 228 bits (580), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 131/442 (29%), Positives = 227/442 (51%), Gaps = 13/442 (2%)
Query: 3 CEAKLNQLRIMSYSSNYLRLISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLS 62
CE+ + M ++WT L+ H + G + L F H+ ++ L+
Sbjct: 240 CESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYF-HLMRMSGNAVSGEALA 298
Query: 63 LVLKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQR 122
+ C+ + + +H + IK GF AL+ +YGK A LF +I +
Sbjct: 299 VFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNK 358
Query: 123 NVVVWNAMISLYTHSNCVSDALYMFDAM-------HVAPDASTFNAIIAG--LAGTEDGS 173
+ WN++I+ + + + +AL +F + +V + T+ ++I G + G D S
Sbjct: 359 GIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDS 418
Query: 174 AKAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGL 233
+ ++ +M+ + N +T+ +L C + +LN+ +EIHG IR + + +++ L
Sbjct: 419 ---LEYFRQMQFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNAL 475
Query: 234 VEAYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDD 293
V Y +CG L S VF ++++D+++W+S+I Y +HG A AL F M + PD
Sbjct: 476 VNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDG 535
Query: 294 ITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIR 353
I +AVL ACSHAGL + + F M + +GL+P +HY+C+VD+L R G L EA +I++
Sbjct: 536 IALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVK 595
Query: 354 GMPVKVTVKAWGALLGACRTYGEVELAEIAGRALFEIEPDNPANYVLLARIYASMGRHGE 413
MP++ V GALL +CR + V++AE L +EP+ +Y+LL+ IY++ GR E
Sbjct: 596 NMPMEPKVCVLGALLNSCRMHKNVDIAEGIASQLSVLEPERTGSYMLLSNIYSAGGRWEE 655
Query: 414 AXXXXXXXXXXGVKVAPGGSWV 435
+ +K G SW+
Sbjct: 656 SANVRALAKKKDLKKVSGSSWI 677
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 161/311 (51%), Gaps = 17/311 (5%)
Query: 20 LRLISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAA 79
LRL W L ++V G ++ AL ++ ++ L+ D Y+L L+L++C + R L A
Sbjct: 123 LRL--WNSILKANVSHGLYENALELYRGMRQR-GLTGDGYILPLILRACRYLGRFGLCRA 179
Query: 80 IHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNC 139
H+ I++G N V L+ +Y K A LF E+P RN + WN MI ++
Sbjct: 180 FHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYD 239
Query: 140 VSDALYMFDAMH---VAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLIT-- 194
A+ +F+ M PD T+ ++++ ++ G + + Y+ + +S N ++
Sbjct: 240 CESAVKIFEWMQREEFKPDEVTWTSVLS--CHSQCGKFEDVLKYFHLMRMS--GNAVSGE 295
Query: 195 -LLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNM 253
L C + +L++ +++HG I+ + + R+ L+ YG+ G + +A ++F +
Sbjct: 296 ALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQI 355
Query: 254 KERDVVAWSSLISAYALHGEARSALETFHHME----MAKVLPDDITFLAVLKACSHAGLA 309
+ + + +W+SLI+++ G+ AL F +E + V + +T+ +V+K C+ G
Sbjct: 356 RNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRG 415
Query: 310 DDALDYFARMQ 320
DD+L+YF +MQ
Sbjct: 416 DDSLEYFRQMQ 426
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 94/194 (48%), Gaps = 5/194 (2%)
Query: 130 MISLYTHSNCVSDALYMFDAMHVA--PDASTFNAIIAGLAGTEDG-SAKAIAFYWRMREL 186
+IS+Y + DA +F+ + + D +N+I+ A G A+ Y MR+
Sbjct: 95 LISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILK--ANVSHGLYENALELYRGMRQR 152
Query: 187 SLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINA 246
L + L +LRAC + + + H I+ + + + + L+ Y + G + +A
Sbjct: 153 GLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDA 212
Query: 247 SNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHA 306
N+F M R+ ++W+ +I ++ + SA++ F M+ + PD++T+ +VL S
Sbjct: 213 YNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQC 272
Query: 307 GLADDALDYFARMQ 320
G +D L YF M+
Sbjct: 273 GKFEDVLKYFHLMR 286
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 83/172 (48%), Gaps = 11/172 (6%)
Query: 229 LRSGLVEAYGRCGCLINASNVFYNMK---ERDVVAWSSLISAYALHGEARSALETFHHME 285
L + L+ Y R G L++A NVF + D+ W+S++ A HG +ALE + M
Sbjct: 91 LAANLISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILKANVSHGLYENALELYRGMR 150
Query: 286 MAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRL 345
+ D +L+AC + G + ++ Q GL+ + + L+ + +AGR+
Sbjct: 151 QRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQ-IGLKENLHVVNELLTLYPKAGRM 209
Query: 346 YEAYDIIRGMPVKVTVKAWGALL-GACRTY---GEVELAEIAGRALFEIEPD 393
+AY++ MPV+ + +W ++ G + Y V++ E R E +PD
Sbjct: 210 GDAYNLFVEMPVRNRM-SWNVMIKGFSQEYDCESAVKIFEWMQRE--EFKPD 258
>AT5G08510.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:2753099-2754731 FORWARD
Length = 511
Score = 228 bits (580), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 114/329 (34%), Positives = 190/329 (57%), Gaps = 2/329 (0%)
Query: 80 IHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNC 139
+HS + GF S+ F L+ Y K + AR++FDE+ +R+V VWNAMI+ Y
Sbjct: 104 LHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGD 163
Query: 140 VSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALL 199
+ A+ +FD+M + +++ +I+G + + S F ++ S+KPN IT++++L
Sbjct: 164 MKAAMELFDSM-PRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVL 222
Query: 200 RACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNM-KERDV 258
AC + L + + + G + N + + + +E Y +CG + A +F + +R++
Sbjct: 223 PACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNL 282
Query: 259 VAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFAR 318
+W+S+I + A HG+ AL F M PD +TF+ +L AC H G+ + F
Sbjct: 283 CSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKS 342
Query: 319 MQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVE 378
M++ + + P +HY C++D+L R G+L EAYD+I+ MP+K WG LLGAC +G VE
Sbjct: 343 MEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVE 402
Query: 379 LAEIAGRALFEIEPDNPANYVLLARIYAS 407
+AEIA ALF++EP NP N V+++ IYA+
Sbjct: 403 IAEIASEALFKLEPTNPGNCVIMSNIYAA 431
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 116/260 (44%), Gaps = 38/260 (14%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
+ SWT ++ + G + +AL +F ++ ++ + + VL +C+ + ++G +
Sbjct: 179 VTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLE 238
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEI-PQRNVVVWNAMI-SLYTHSNC 139
++ + GF N +V A ++MY KC A++LF+E+ QRN+ WN+MI SL TH
Sbjct: 239 GYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATH--- 295
Query: 140 VSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALL 199
G D +A+ + +M KP+ +T + LL
Sbjct: 296 ----------------------------GKHD---EALTLFAQMLREGEKPDAVTFVGLL 324
Query: 200 RACVRMTSLNMIKEIHGCSIRNH-IDPHPQLRSGLVEAYGRCGCLINASNVFYNMKER-D 257
ACV + +E+ H I P + +++ GR G L A ++ M + D
Sbjct: 325 LACVHGGMVVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPD 384
Query: 258 VVAWSSLISAYALHGEARSA 277
V W +L+ A + HG A
Sbjct: 385 AVVWGTLLGACSFHGNVEIA 404
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 140/319 (43%), Gaps = 33/319 (10%)
Query: 112 ARKLFDEIPQRNVVVWNAMISLY-----THSNCVSDALYMFDAMHVAPDASTFNAIIAGL 166
ARKLFD ++N +I Y H + V L FD + P TFN I A
Sbjct: 35 ARKLFDHHQNSCTFLYNKLIQAYYVHHQPHESIVLYNLLSFDGLR--PSHHTFNFIFAAS 92
Query: 167 AGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPH 226
A + R + + L+ A ++ +L C R D
Sbjct: 93 ASFSSARPLRLLHSQFFRS-GFESDSFCCTTLITAYAKLGAL--------CCARRVFDEM 143
Query: 227 PQ----LRSGLVEAYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFH 282
+ + + ++ Y R G + A +F +M ++V +W+++IS ++ +G AL+ F
Sbjct: 144 SKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFL 203
Query: 283 HMEMAK-VLPDDITFLAVLKACSHAGLAD--DALDYFARMQQDYGLQPSSDHYSC--LVD 337
ME K V P+ IT ++VL AC++ G + L+ +AR + + Y C ++
Sbjct: 204 CMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEGYARENGFF-----DNIYVCNATIE 258
Query: 338 VLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVELA-EIAGRALFEIEPDNPA 396
+ S+ G + A + + + + +W +++G+ T+G+ + A + + L E E +
Sbjct: 259 MYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAV 318
Query: 397 NYV--LLARIYASMGRHGE 413
+V LLA ++ M G+
Sbjct: 319 TFVGLLLACVHGGMVVKGQ 337
>AT3G63370.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:23402080-23405991 FORWARD
Length = 1017
Score = 228 bits (580), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 132/414 (31%), Positives = 217/414 (52%), Gaps = 35/414 (8%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
LISWT + + + H +AL +F + + +D +L +L++ S + + IH
Sbjct: 415 LISWTTVIAGYAQNDCHVEALELFRDVAKK-RMEIDEMILGSILRASSVLKSMLIVKEIH 473
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVS 141
H ++ G L + + LVD+YGKC + A ++F+ I ++VV W +MIS
Sbjct: 474 CHILRKGLL-DTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMIS--------- 523
Query: 142 DALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRA 201
+ L G E ++A+ + RM E L + + LL +L A
Sbjct: 524 ---------------------SSALNGNE---SEAVELFRRMVETGLSADSVALLCILSA 559
Query: 202 CVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAW 261
+++LN +EIH +R + +V+ Y CG L +A VF ++ + ++ +
Sbjct: 560 AASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQY 619
Query: 262 SSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQ 321
+S+I+AY +HG ++A+E F M V PD I+FLA+L ACSHAGL D+ + M+
Sbjct: 620 TSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEH 679
Query: 322 DYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVELAE 381
+Y L+P +HY CLVD+L RA + EA++ ++ M + T + W ALL ACR++ E E+ E
Sbjct: 680 EYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGE 739
Query: 382 IAGRALFEIEPDNPANYVLLARIYASMGRHGEAXXXXXXXXXXGVKVAPGGSWV 435
IA + L E+EP NP N VL++ ++A GR + G++ PG SW+
Sbjct: 740 IAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWI 793
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 129/285 (45%), Gaps = 42/285 (14%)
Query: 23 ISWTKQLNSHVKQGFHQQALVVFNHIQTS---LALSLDPYVLSLVLKSCSAIHRSQLGAA 79
+W + ++V G AL ++ +++ L LS P +LK+C+ + + G+
Sbjct: 111 FAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFP----ALLKACAKLRDIRSGSE 166
Query: 80 IHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQR-NVVVWNAMISLYTHSN 138
+HS +K+G+ S F+ ALV MY K +AR+LFD ++ + V+WN+++S Y+ S
Sbjct: 167 LHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSG 226
Query: 139 CVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLAL 198
+ L +F MH+ A PN T+++
Sbjct: 227 KSLETLELFREMHMTGPA---------------------------------PNSYTIVSA 253
Query: 199 LRACVRMTSLNMIKEIHGCSIRNHI-DPHPQLRSGLVEAYGRCGCLINASNVFYNMKERD 257
L AC + + KEIH +++ + + L+ Y RCG + A + M D
Sbjct: 254 LTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNAD 313
Query: 258 VVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKA 302
VV W+SLI Y + + ALE F M A D+++ +++ A
Sbjct: 314 VVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAA 358
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 136/295 (46%), Gaps = 35/295 (11%)
Query: 5 AKLNQLRIMSYSSNYLRLISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLV 64
K+ Q + N +++W + +V+ +++AL F+ + + S D ++ +
Sbjct: 297 GKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKS-DEVSMTSI 355
Query: 65 LKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNV 124
+ + + G +H++ IK G+ SN V L+DMY KC T + F + +++
Sbjct: 356 IAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDL 415
Query: 125 VVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMR 184
+ W +I+ Y ++C +AL +F VA + +I G
Sbjct: 416 ISWTTVIAGYAQNDCHVEALELF--RDVAKKRMEIDEMILG------------------- 454
Query: 185 ELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLI 244
++LRA + S+ ++KEIH C I +++ LV+ YG+C +
Sbjct: 455 ------------SILRASSVLKSMLIVKEIH-CHILRKGLLDTVIQNELVDVYGKCRNMG 501
Query: 245 NASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAV 299
A+ VF ++K +DVV+W+S+IS+ AL+G A+E F M + D + L +
Sbjct: 502 YATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCI 556
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 109/261 (41%), Gaps = 39/261 (14%)
Query: 111 SARKLFDEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTE 170
S K+FDE+P R WN MI Y +
Sbjct: 97 SQEKVFDEMPDRTAFAWNTMIGAYV---------------------------------SN 123
Query: 171 DGSAKAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLR 230
A A+A YW MR + L + ALL+AC ++ + E+H ++ +
Sbjct: 124 GEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIV 183
Query: 231 SGLVEAYGRCGCLINASNVFYNMKER-DVVAWSSLISAYALHGEARSALETFHHMEMAKV 289
+ LV Y + L A +F +E+ D V W+S++S+Y+ G++ LE F M M
Sbjct: 184 NALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGP 243
Query: 290 LPDDITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSC--LVDVLSRAGRLYE 347
P+ T ++ L AC A + A + + SS+ Y C L+ + +R G++ +
Sbjct: 244 APNSYTIVSALTACDGFSYAKLGKEIHASVLKSS--THSSELYVCNALIAMYTRCGKMPQ 301
Query: 348 AYDIIRGMPVKVTVKAWGALL 368
A I+R M V W +L+
Sbjct: 302 AERILRQMN-NADVVTWNSLI 321
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 124/281 (44%), Gaps = 35/281 (12%)
Query: 25 WTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIHSHS 84
W L+S+ G + L +F + + + + Y + L +C ++LG IH+
Sbjct: 215 WNSILSSYSTSGKSLETLELFREMHMT-GPAPNSYTIVSALTACDGFSYAKLGKEIHASV 273
Query: 85 IKMGFLSNPFVAC-ALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSDA 143
+K S+ C AL+ MY +C A ++ ++ +VV WN++I Y + +A
Sbjct: 274 LKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEA 333
Query: 144 LYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRACV 203
L F M I AG E +++ +++ A
Sbjct: 334 LEFFSDM-----------IAAGHKSDE----------------------VSMTSIIAASG 360
Query: 204 RMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWSS 263
R+++L E+H I++ D + Q+ + L++ Y +C F M ++D+++W++
Sbjct: 361 RLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTT 420
Query: 264 LISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACS 304
+I+ YA + ALE F + ++ D++ ++L+A S
Sbjct: 421 VIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASS 461
>AT5G59200.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:23888793-23890565 REVERSE
Length = 590
Score = 227 bits (579), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 131/427 (30%), Positives = 229/427 (53%), Gaps = 14/427 (3%)
Query: 12 IMSYSSN---YLRLISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSC 68
+ SY SN YL +T ++ V G + +++ + + L D YV++ VLK+C
Sbjct: 129 VFSYVSNPNVYL----YTAMIDGFVSSGRSADGVSLYHRMIHNSVLP-DNYVITSVLKAC 183
Query: 69 SAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWN 128
++ IH+ +K+GF S+ V ++++YGK +A+K+FDE+P R+ V
Sbjct: 184 DL----KVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAAT 239
Query: 129 AMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSL 188
MI+ Y+ + +AL +F + + D + A+I GL ++ + KA+ + M+ ++
Sbjct: 240 VMINCYSECGFIKEALELFQDVKI-KDTVCWTAMIDGLVRNKEMN-KALELFREMQMENV 297
Query: 189 KPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASN 248
N T + +L AC + +L + + +H ++ + + L+ Y RCG + A
Sbjct: 298 SANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARR 357
Query: 249 VFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGL 308
VF M+++DV++++++IS A+HG + A+ F M P+ +T +A+L ACSH GL
Sbjct: 358 VFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGL 417
Query: 309 ADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALL 368
D L+ F M++ + ++P +HY C+VD+L R GRL EAY I +P++ G LL
Sbjct: 418 LDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLL 477
Query: 369 GACRTYGEVELAEIAGRALFEIEPDNPANYVLLARIYASMGRHGEAXXXXXXXXXXGVKV 428
AC+ +G +EL E + LFE E + YVLL+ +YAS G+ E+ G++
Sbjct: 478 SACKIHGNMELGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEK 537
Query: 429 APGGSWV 435
PG S +
Sbjct: 538 EPGCSTI 544
>AT5G15300.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:4968384-4970030 REVERSE
Length = 548
Score = 227 bits (579), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 127/394 (32%), Positives = 201/394 (51%), Gaps = 39/394 (9%)
Query: 53 ALSLDPYVLSLVLKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSA 112
+S D Y + VLK+CS + G A H ++ GF+ N +V AL+ + C A
Sbjct: 107 GVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIA 166
Query: 113 RKLFDEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAM---------------------- 150
+LFD+ + + V W++M S Y + +A+ +FD M
Sbjct: 167 SELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMD 226
Query: 151 --------HVAPDASTFNAIIAGLAGTEDGSAK-AIAFYWRMRELSLKPNLITLLALLRA 201
D T+NA+I+G G K A+ + MR+ P+++T+L+LL A
Sbjct: 227 SARELFDRFTEKDVVTWNAMISGYVNC--GYPKEALGIFKEMRDAGEHPDVVTILSLLSA 284
Query: 202 CVRMTSLNMIKEIH-----GCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKER 256
C + L K +H S+ + I + + L++ Y +CG + A VF +K+R
Sbjct: 285 CAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDR 344
Query: 257 DVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYF 316
D+ W++LI ALH A ++E F M+ KV P+++TF+ V+ ACSH+G D+ YF
Sbjct: 345 DLSTWNTLIVGLALH-HAEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYF 403
Query: 317 ARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGE 376
+ M+ Y ++P+ HY C+VD+L RAG+L EA+ + M ++ W LLGAC+ YG
Sbjct: 404 SLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGACKIYGN 463
Query: 377 VELAEIAGRALFEIEPDNPANYVLLARIYASMGR 410
VEL + A L + D +YVLL+ IYAS G+
Sbjct: 464 VELGKYANEKLLSMRKDESGDYVLLSNIYASTGQ 497
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 123/312 (39%), Gaps = 57/312 (18%)
Query: 80 IHSHSIKMGFLSNPFVACALVDMYGKCVSTFSA----RKLFDEIPQRNVVVWNAMISLYT 135
IH+ + G +SN V L+ Y +S A KLFDEIP+
Sbjct: 31 IHASMVVNGLMSNLSVVGELI--YSASLSVPGALKYAHKLFDEIPK-------------- 74
Query: 136 HSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITL 195
PD S N ++ G A + K ++ Y M + + P+ T
Sbjct: 75 ------------------PDVSICNHVLRGSAQSMK-PEKTVSLYTEMEKRGVSPDRYTF 115
Query: 196 LALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKE 255
+L+AC ++ + HG +R+ + +++ L+ + CG L AS +F + +
Sbjct: 116 TFVLKACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAK 175
Query: 256 RDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDY 315
VAWSS+ S YA G+ A+ F M D + + ++ C D A +
Sbjct: 176 AHKVAWSSMTSGYAKRGKIDEAMRLFDEMP----YKDQVAWNVMITGCLKCKEMDSAREL 231
Query: 316 FARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGM------PVKVTVKAWGALLG 369
F R + + ++ ++ G EA I + M P VT+ +LL
Sbjct: 232 FDRFTEKDVVT-----WNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTIL---SLLS 283
Query: 370 ACRTYGEVELAE 381
AC G++E +
Sbjct: 284 ACAVLGDLETGK 295
>AT4G14820.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:8507794-8510038 REVERSE
Length = 722
Score = 227 bits (579), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 122/406 (30%), Positives = 213/406 (52%), Gaps = 3/406 (0%)
Query: 5 AKLNQLRIMSYSSNYLRLISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLV 64
++N R + ++ +++W + + + G +A +F ++ S + D +L +
Sbjct: 160 GRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMP-DEMILCNI 218
Query: 65 LKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNV 124
+ +C + AI+ I+ + + ALV MY AR+ F ++ RN+
Sbjct: 219 VSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNL 278
Query: 125 VVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMR 184
V AM+S Y+ + DA +FD D + +I+ + D +A+ + M
Sbjct: 279 FVSTAMVSGYSKCGRLDDAQVIFDQTE-KKDLVCWTTMISAYVES-DYPQEALRVFEEMC 336
Query: 185 ELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLI 244
+KP+++++ +++ AC + L+ K +H C N ++ + + L+ Y +CG L
Sbjct: 337 CSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLD 396
Query: 245 NASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACS 304
+VF M R+VV+WSS+I+A ++HGEA AL F M+ V P+++TF+ VL CS
Sbjct: 397 ATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCS 456
Query: 305 HAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAW 364
H+GL ++ FA M +Y + P +HY C+VD+ RA L EA ++I MPV V W
Sbjct: 457 HSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIW 516
Query: 365 GALLGACRTYGEVELAEIAGRALFEIEPDNPANYVLLARIYASMGR 410
G+L+ ACR +GE+EL + A + + E+EPD+ VL++ IYA R
Sbjct: 517 GSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQR 562
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 163/342 (47%), Gaps = 14/342 (4%)
Query: 40 QALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACAL 99
+A ++F + LD + +LK+ S + G +H + K+ L +PFV
Sbjct: 93 RATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGF 152
Query: 100 VDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAM---HVAPDA 156
+DMY C AR +FDE+ R+VV WN MI Y V +A +F+ M +V PD
Sbjct: 153 MDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDE 212
Query: 157 STFNAIIAGLAGTEDGS-AKAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKE-I 214
I++ T + +AI + ++ + +L+T L + A ++M +E
Sbjct: 213 MILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGA--GCMDMAREFF 270
Query: 215 HGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEA 274
S+RN + + +V Y +CG L +A +F +++D+V W+++ISAY
Sbjct: 271 RKMSVRNLF-----VSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYP 325
Query: 275 RSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSC 334
+ AL F M + + PD ++ +V+ AC++ G+ D A + GL+ +
Sbjct: 326 QEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKA-KWVHSCIHVNGLESELSINNA 384
Query: 335 LVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGE 376
L+++ ++ G L D+ MP + V +W +++ A +GE
Sbjct: 385 LINMYAKCGGLDATRDVFEKMP-RRNVVSWSSMINALSMHGE 425
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 86/165 (52%), Gaps = 1/165 (0%)
Query: 143 ALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRAC 202
AL +F ++ P++ FN + L+ + + A I FY R+R + + + + L +L+A
Sbjct: 63 ALNVFSSIPSPPESIVFNPFLRDLSRSSEPRA-TILFYQRIRHVGGRLDQFSFLPILKAV 121
Query: 203 VRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWS 262
++++L E+HG + + P + +G ++ Y CG + A NVF M RDVV W+
Sbjct: 122 SKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWN 181
Query: 263 SLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAG 307
++I Y G A + F M+ + V+PD++ ++ AC G
Sbjct: 182 TMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTG 226
>AT3G49170.1 | Symbols: EMB2261 | EMB2261 (embryo defective 2261) |
chr3:18226954-18229600 REVERSE
Length = 850
Score = 227 bits (578), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 137/489 (28%), Positives = 237/489 (48%), Gaps = 76/489 (15%)
Query: 20 LRLISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAA 79
L +++WT + ++ GF ++A+ F + S D + LS V +C+ + LG
Sbjct: 232 LNVVTWTLMITRCMQMGFPREAIRFFLDMVLS-GFESDKFTLSSVFSACAELENLSLGKQ 290
Query: 80 IHSHSIKMGFLSNPFVACALVDMYGKCVSTFSA---RKLFDEIPQRNVVVWNAMISLYTH 136
+HS +I+ G + + V C+LVDMY KC + S RK+FD + +V+ W A+I+ Y
Sbjct: 291 LHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMK 348
Query: 137 S-NCVSDALYMFDAM----HVAPD-----------------------------------A 156
+ N ++A+ +F M HV P+ +
Sbjct: 349 NCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNS 408
Query: 157 STFNAIIAGLAGTE------------------------DGSAKAIAFYWRMRELS----- 187
S N++I+ ++ DG+ + + F + LS
Sbjct: 409 SVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITER 468
Query: 188 -LKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINA 246
L + T +LL + S+ ++IH ++ + + + + L+ Y +CG + A
Sbjct: 469 ELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTA 528
Query: 247 SNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHA 306
S VF M+ R+V++W+S+I+ +A HG A LETF+ M V P+++T++A+L ACSH
Sbjct: 529 SRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHV 588
Query: 307 GLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGA 366
GL + +F M +D+ ++P +HY+C+VD+L RAG L +A++ I MP + V W
Sbjct: 589 GLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRT 648
Query: 367 LLGACRTYGEVELAEIAGRALFEIEPDNPANYVLLARIYASMGRHGEAXXXXXXXXXXGV 426
LGACR + EL ++A R + E++P+ PA Y+ L+ IYA G+ E+ +
Sbjct: 649 FLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNL 708
Query: 427 KVAPGGSWV 435
G SW+
Sbjct: 709 VKEGGCSWI 717
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 91/378 (24%), Positives = 163/378 (43%), Gaps = 50/378 (13%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
++SW+ + + G A+ VF L L + Y + V+++CS +G
Sbjct: 131 VVSWSAMMACYGNNGRELDAIKVFVEF-LELGLVPNDYCYTAVIRACSNSDFVGVGRVTL 189
Query: 82 SHSIKMG-FLSNPFVACALVDMYGKCVSTF-SARKLFDEIPQRNVVVWNAMISLYTHSNC 139
+K G F S+ V C+L+DM+ K ++F +A K+FD++ + NVV W MI + C
Sbjct: 190 GFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMI-----TRC 244
Query: 140 VSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALL 199
+ +AI F+ M + + TL ++
Sbjct: 245 MQMGF----------------------------PREAIRFFLDMVLSGFESDKFTLSSVF 276
Query: 200 RACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRC---GCLINASNVFYNMKER 256
AC + +L++ K++H +IR+ + + LV+ Y +C G + + VF M++
Sbjct: 277 SACAELENLSLGKQLHSWAIRSGL--VDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDH 334
Query: 257 DVVAWSSLISAYALHGE-ARSALETFHHM-EMAKVLPDDITFLAVLKACSHAGLADDALD 314
V++W++LI+ Y + A A+ F M V P+ TF + KAC + L+D +
Sbjct: 335 SVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGN--LSDPRVG 392
Query: 315 YFARMQQ-DYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRT 373
Q GL +S + ++ + ++ R+ +A + K V L G CR
Sbjct: 393 KQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRN 452
Query: 374 YGEVE----LAEIAGRAL 387
+ L+EI R L
Sbjct: 453 LNFEQAFKLLSEITEREL 470
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 91/194 (46%), Gaps = 19/194 (9%)
Query: 193 ITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYN 252
+T +LL++C+R + K +H I I+P L + L+ Y + G A +VF
Sbjct: 63 VTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFET 122
Query: 253 MK---ERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLA 309
M+ +RDVV+WS++++ Y +G A++ F ++P+D + AV++ACS++
Sbjct: 123 MRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNS--- 179
Query: 310 DDALDYFARMQQDYGLQPSSDHYS-------CLVDVLSRAGRLYE-AYDIIRGMPVKVTV 361
D+ + G + H+ L+D+ + +E AY + M ++ V
Sbjct: 180 ----DFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMS-ELNV 234
Query: 362 KAWGALLGACRTYG 375
W ++ C G
Sbjct: 235 VTWTLMITRCMQMG 248
>AT1G77010.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28942710-28944797 FORWARD
Length = 695
Score = 227 bits (578), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 119/415 (28%), Positives = 218/415 (52%), Gaps = 6/415 (1%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
+I W ++ ++ +ALV+FN ++ D L+ V+ +C + + G +H
Sbjct: 284 VILWNSMISGYIANNMKMEALVLFNEMRNET--REDSRTLAAVINACIGLGFLETGKQMH 341
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVS 141
H+ K G + + VA L+DMY KC S A KLF E+ + ++ N+MI +Y +
Sbjct: 342 CHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRID 401
Query: 142 DALYMFDAMHVAPDASTFNAIIAGLAGTEDG-SAKAIAFYWRMRELSLKPNLITLLALLR 200
DA +F+ + ++N++ G +++G + + + ++ +M +L L + ++L +++
Sbjct: 402 DAKRVFERIE-NKSLISWNSMTNGF--SQNGCTVETLEYFHQMHKLDLPTDEVSLSSVIS 458
Query: 201 ACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVA 260
AC ++SL + +++ + +D + S L++ Y +CG + + VF M + D V
Sbjct: 459 ACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVP 518
Query: 261 WSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQ 320
W+S+IS YA +G+ A++ F M +A + P ITF+ VL AC++ GL ++ F M+
Sbjct: 519 WNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMK 578
Query: 321 QDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVELA 380
D+G P +H+SC+VD+L+RAG + EA +++ MP V W ++L C G +
Sbjct: 579 VDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSSILRGCVANGYKAMG 638
Query: 381 EIAGRALFEIEPDNPANYVLLARIYASMGRHGEAXXXXXXXXXXGVKVAPGGSWV 435
+ A + E+EP+N YV L+ I+A+ G + V PG SW
Sbjct: 639 KKAAEKIIELEPENSVAYVQLSAIFATSGDWESSALVRKLMRENNVTKNPGSSWT 693
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 90/392 (22%), Positives = 165/392 (42%), Gaps = 52/392 (13%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
+++ L+ ++ G+ ++AL +F L S D L+ VLK+C+ + + G IH
Sbjct: 155 VVTLNSLLHGYILNGYAEEALRLFKE----LNFSADAITLTTVLKACAELEALKCGKQIH 210
Query: 82 SHSIKMGF---------LSNPFVAC----------------------ALVDMYGKCVSTF 110
+ + G L N + C AL+ Y C
Sbjct: 211 AQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGRVN 270
Query: 111 SARKLFDEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAM--HVAPDASTFNAII---AG 165
+R LFD R V++WN+MIS Y +N +AL +F+ M D+ T A+I G
Sbjct: 271 ESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMRNETREDSRTLAAVINACIG 330
Query: 166 LAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDP 225
L E G +M + K LI + + + M S + C + + ++
Sbjct: 331 LGFLETGK--------QMHCHACKFGLIDDIVVASTLLDMYS-KCGSPMEACKLFSEVES 381
Query: 226 HPQ-LRSGLVEAYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHM 284
+ L + +++ Y CG + +A VF ++ + +++W+S+ + ++ +G LE FH M
Sbjct: 382 YDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQM 441
Query: 285 EMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGR 344
+ D+++ +V+ AC+ + FAR GL S L+D+ + G
Sbjct: 442 HKLDLPTDEVSLSSVISACASISSLELGEQVFARATI-VGLDSDQVVSSSLIDLYCKCGF 500
Query: 345 LYEAYDIIRGMPVKVTVKAWGALLGACRTYGE 376
+ + M VK W +++ T G+
Sbjct: 501 VEHGRRVFDTM-VKSDEVPWNSMISGYATNGQ 531
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 138/344 (40%), Gaps = 62/344 (18%)
Query: 64 VLKSCSAIHRSQLGAAIHSHSIKMGFLSN-PFVACALVDMYGKCVSTFSARKLFDEIPQR 122
+L+SCS+ +R L + +K GFLS+ VA L+ MY + AR LFDE+P R
Sbjct: 32 LLQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEMPDR 91
Query: 123 NVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAF--- 179
N WN MI Y +S +L FD M D ++N +++G A + S F
Sbjct: 92 NYFSWNTMIEGYMNSGEKGTSLRFFDMMP-ERDGYSWNVVVSGFAKAGELSVARRLFNAM 150
Query: 180 ------------------------YWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIH 215
+EL+ + ITL +L+AC + +L K+IH
Sbjct: 151 PEKDVVTLNSLLHGYILNGYAEEALRLFKELNFSADAITLTTVLKACAELEALKCGKQIH 210
Query: 216 GCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERD------------------ 257
+ ++ ++ S LV Y +CG L AS + ++E D
Sbjct: 211 AQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGRVN 270
Query: 258 -------------VVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACS 304
V+ W+S+IS Y + AL F+ M + D T AV+ AC
Sbjct: 271 ESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMR-NETREDSRTLAAVINACI 329
Query: 305 HAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEA 348
G + + +GL S L+D+ S+ G EA
Sbjct: 330 GLGFLETGKQMHCHACK-FGLIDDIVVASTLLDMYSKCGSPMEA 372
>AT3G29230.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:11188803-11190605 FORWARD
Length = 600
Score = 226 bits (575), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 141/445 (31%), Positives = 224/445 (50%), Gaps = 69/445 (15%)
Query: 29 LNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIHSHSIKMG 88
+ +H + QA VF+ +Q L D + +LK+CS + +H+H K+G
Sbjct: 89 IRAHAQNSQPYQAFFVFSEMQ-RFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLG 147
Query: 89 FLSNPFVACALVDMYGKC--------------------VSTFS-------------ARKL 115
S+ +V AL+D Y +C VS S AR+L
Sbjct: 148 LSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRL 207
Query: 116 FDEIPQRNVVVWNAMISLYTHSNCVSDAL------------------------------- 144
FDE+PQR+++ WN M+ Y +S A
Sbjct: 208 FDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMAR 267
Query: 145 YMFDAMHV-APDASTFNAIIAGLAGTEDGSAK-AIAFYWRMRELSLKPNLITLLALLRAC 202
MFD M + A + T+ IIAG A E G K A +M LK + ++++L AC
Sbjct: 268 VMFDKMPLPAKNVVTWTIIIAGYA--EKGLLKEADRLVDQMVASGLKFDAAAVISILAAC 325
Query: 203 VRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWS 262
L++ IH R+++ + + + L++ Y +CG L A +VF ++ ++D+V+W+
Sbjct: 326 TESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWN 385
Query: 263 SLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQD 322
+++ +HG + A+E F M + PD +TF+AVL +C+HAGL D+ +DYF M++
Sbjct: 386 TMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKV 445
Query: 323 YGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVELAEI 382
Y L P +HY CLVD+L R GRL EA +++ MP++ V WGALLGACR + EV++A+
Sbjct: 446 YDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKE 505
Query: 383 AGRALFEIEPDNPANYVLLARIYAS 407
L +++P +P NY LL+ IYA+
Sbjct: 506 VLDNLVKLDPCDPGNYSLLSNIYAA 530
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 132/297 (44%), Gaps = 45/297 (15%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
+++WT + + ++G ++A + + + S L D + +L +C+ LG IH
Sbjct: 280 VVTWTIIIAGYAEKGLLKEADRLVDQMVAS-GLKFDAAAVISILAACTESGLLSLGMRIH 338
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVS 141
S + SN +V AL+DMY KC + A +F++IP++++V WN M+
Sbjct: 339 SILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLH--------- 389
Query: 142 DALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRA 201
GL G +AI + RMR ++P+ +T +A+L +
Sbjct: 390 -----------------------GL-GVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCS 425
Query: 202 CVRMTSLNMIKE--IHGCSIRNHIDPHPQLR--SGLVEAYGRCGCLINASNVFYNMK-ER 256
C +I E + S+ D PQ+ LV+ GR G L A V M E
Sbjct: 426 C---NHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEP 482
Query: 257 DVVAWSSLISAYALHGEARSALETFHHM-EMAKVLPDDITFLAVLKACSH--AGLAD 310
+VV W +L+ A +H E A E ++ ++ P + + L+ + A + G+AD
Sbjct: 483 NVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVAD 539
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 91/200 (45%), Gaps = 16/200 (8%)
Query: 199 LRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDV 258
L+ + +LN +K++H IR ++ + L+ A C A VF ++E +V
Sbjct: 23 LQDLPKCANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNV 82
Query: 259 VAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFAR 318
+SLI A+A + + A F M+ + D+ T+ +LKACS +
Sbjct: 83 HLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLP-----VVK 137
Query: 319 MQQDY--GLQPSSDHY--SCLVDVLSRAGRL--YEAYDIIRGMPVKVTVKAWGALLGACR 372
M ++ L SSD Y + L+D SR G L +A + M + TV +W ++LG
Sbjct: 138 MMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTV-SWNSMLGGLV 196
Query: 373 TYGEVELAEIAGRALFEIEP 392
GE+ A R LF+ P
Sbjct: 197 KAGELRDA----RRLFDEMP 212
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 79/402 (19%), Positives = 160/402 (39%), Gaps = 83/402 (20%)
Query: 65 LKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNV 124
L C+ +++ + +H+ I+ + +A L+ C T A ++F+++ + NV
Sbjct: 26 LPKCANLNQVK---QLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNV 82
Query: 125 VVWNAMISLYTHSNCVSDALYMFDAMH---VAPDASTFNAIIAGLAGTEDGSAKAIAFYW 181
+ N++I + ++ A ++F M + D T+ ++ +G + +
Sbjct: 83 HLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSG-QSWLPVVKMMHN 141
Query: 182 RMRELSLKPNLITLLALLRACVRMTSLNM---IKEIHGCSIRNHIDPHPQLRSGLVEAYG 238
+ +L L ++ AL+ R L + +K S R+ + + L GLV+A
Sbjct: 142 HIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSML-GGLVKA-- 198
Query: 239 RCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHH--------------- 283
G L +A +F M +RD+++W++++ YA E A E F
Sbjct: 199 --GELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMG 256
Query: 284 ------MEMAKVLPDDITF----------------------------------------- 296
MEMA+V+ D +
Sbjct: 257 YSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAA 316
Query: 297 --LAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRG 354
+++L AC+ +GL + + +++ L ++ + L+D+ ++ G L +A+D+
Sbjct: 317 AVISILAACTESGLLSLGMRIHSILKRS-NLGSNAYVLNALLDMYAKCGNLKKAFDVFND 375
Query: 355 MPVKVTVKAWGALLGACRTYGE-VELAEIAGRALFE-IEPDN 394
+P K V +W +L +G E E+ R E I PD
Sbjct: 376 IPKKDLV-SWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDK 416
>AT2G33760.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:14275800-14277551 FORWARD
Length = 583
Score = 225 bits (573), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 127/365 (34%), Positives = 203/365 (55%), Gaps = 39/365 (10%)
Query: 54 LSLDPYVLSLVLKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSAR 113
+S Y + V+KSC+ + ++G +H H++ GF + +V ALV Y KC AR
Sbjct: 103 VSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGAR 162
Query: 114 KLFDEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGS 173
++FD +P++++V WN+++S + + GLA
Sbjct: 163 QVFDRMPEKSIVAWNSLVSGFEQN---------------------------GLAD----- 190
Query: 174 AKAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGL 233
+AI +++MRE +P+ T ++LL AC + ++++ +H I +D + +L + L
Sbjct: 191 -EAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTAL 249
Query: 234 VEAYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHME-MAKVLPD 292
+ Y RCG + A VF MKE +V AW+++ISAY HG + A+E F+ ME +P+
Sbjct: 250 INLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPN 309
Query: 293 DITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDII 352
++TF+AVL AC+HAGL ++ + RM + Y L P +H+ C+VD+L RAG L EAY I
Sbjct: 310 NVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFI 369
Query: 353 RGMPV--KVTVKA-WGALLGACRTYGEVELA-EIAGRALFEIEPDNPANYVLLARIYASM 408
+ K T A W A+LGAC+ + +L EIA R L +EPDNP ++V+L+ IYA
Sbjct: 370 HQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKR-LIALEPDNPGHHVMLSNIYALS 428
Query: 409 GRHGE 413
G+ E
Sbjct: 429 GKTDE 433
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 117/225 (52%), Gaps = 9/225 (4%)
Query: 154 PDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKE 213
PD FN++I + +A+Y RM ++ P+ T +++++C +++L + K
Sbjct: 70 PDDFLFNSVIKSTSKLRL-PLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKG 128
Query: 214 IHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGE 273
+H ++ + +++ LV Y +CG + A VF M E+ +VAW+SL+S + +G
Sbjct: 129 VHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGL 188
Query: 274 ARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQ---DYGLQPSSD 330
A A++ F+ M + PD TF+++L AC+ G A+ + + Q GL +
Sbjct: 189 ADEAIQVFYQMRESGFEPDSATFVSLLSACAQTG----AVSLGSWVHQYIISEGLDLNVK 244
Query: 331 HYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYG 375
+ L+++ SR G + +A ++ M + V AW A++ A T+G
Sbjct: 245 LGTALINLYSRCGDVGKAREVFDKMK-ETNVAAWTAMISAYGTHG 288
>AT3G15930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5387444-5389690 FORWARD
Length = 687
Score = 225 bits (573), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 126/416 (30%), Positives = 220/416 (52%), Gaps = 7/416 (1%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
+ SW ++ + + +++++ + ++ +L +S L LVL +CS + L +H
Sbjct: 201 VFSWNLMISGYNRMKEYEESIELLVEMERNL-VSPTSVTLLLVLSACSKVKDKDLCKRVH 259
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVS 141
+ + + + ALV+ Y C A ++F + R+V+ W +++ Y +
Sbjct: 260 EYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLK 319
Query: 142 DALYMFDAMHVAPDASTFNAIIAGL--AGTEDGSAKAIAFYWRMRELSLKPNLITLLALL 199
A FD M V D ++ +I G AG + S + + M+ + P+ T++++L
Sbjct: 320 LARTYFDQMPVR-DRISWTIMIDGYLRAGCFNES---LEIFREMQSAGMIPDEFTMVSVL 375
Query: 200 RACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVV 259
AC + SL + + I +N I + + L++ Y +CGC A VF++M +RD
Sbjct: 376 TACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKF 435
Query: 260 AWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARM 319
W++++ A +G+ + A++ F M+ + PDDIT+L VL AC+H+G+ D A +FA+M
Sbjct: 436 TWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKM 495
Query: 320 QQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVEL 379
+ D+ ++PS HY C+VD+L RAG + EAY+I+R MP+ WGALLGA R + + +
Sbjct: 496 RSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPM 555
Query: 380 AEIAGRALFEIEPDNPANYVLLARIYASMGRHGEAXXXXXXXXXXGVKVAPGGSWV 435
AE+A + + E+EPDN A Y LL IYA R + +K PG S +
Sbjct: 556 AELAAKKILELEPDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLI 611
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 117/281 (41%), Gaps = 67/281 (23%)
Query: 58 PYVLSLVLKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFD 117
P++L+ + + A+ G +H H +K G SN +V ALV MY C AR +FD
Sbjct: 138 PFLLNGLKRDGGAL---ACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFD 194
Query: 118 EIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAI 177
+ +V WN MIS Y +++ + M
Sbjct: 195 RRCKEDVFSWNLMISGYNRMKEYEESIELLVEME-------------------------- 228
Query: 178 AFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAY 237
R L + P +TLL +L AC ++ ++ K +H +P +L + LV AY
Sbjct: 229 ------RNL-VSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAY 281
Query: 238 GRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEAR---------------------- 275
CG + A +F +MK RDV++W+S++ Y G +
Sbjct: 282 AACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMID 341
Query: 276 ---------SALETFHHMEMAKVLPDDITFLAVLKACSHAG 307
+LE F M+ A ++PD+ T ++VL AC+H G
Sbjct: 342 GYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLG 382
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 134/323 (41%), Gaps = 56/323 (17%)
Query: 80 IHSHSIKMGFLSNPFVACALVDMY----GKCVSTFSARKLFDEIPQRNVVVWNAMISLYT 135
+HS SI G NP L + G VS A KLF +IP+ +VVVWN MI ++
Sbjct: 53 LHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSY--AYKLFVKIPEPDVVVWNNMIKGWS 110
Query: 136 HSNCVSDALYMFDAM---HVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNL 192
+C + + ++ M V PD+ TF ++ GL DG A A
Sbjct: 111 KVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGL--KRDGGALACG-------------- 154
Query: 193 ITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYN 252
K++H ++ + + +++ LV+ Y CG + A VF
Sbjct: 155 -------------------KKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDR 195
Query: 253 MKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHA---GLA 309
+ DV +W+ +IS Y E ++E ME V P +T L VL ACS L
Sbjct: 196 RCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLC 255
Query: 310 DDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLG 369
+Y + + +PS + LV+ + G + A I R M + V +W +++
Sbjct: 256 KRVHEYVSECKT----EPSLRLENALVNAYAACGEMDIAVRIFRSMKAR-DVISWTSIVK 310
Query: 370 ACRTYGEVELAEIAGRALFEIEP 392
G ++LA R F+ P
Sbjct: 311 GYVERGNLKLA----RTYFDQMP 329
>AT4G16835.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:9473021-9474803 FORWARD
Length = 575
Score = 225 bits (573), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 134/346 (38%), Positives = 187/346 (54%), Gaps = 12/346 (3%)
Query: 98 ALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDAS 157
A++ Y +C A F P R VV W AMI+ Y + V A MF M V +
Sbjct: 105 AMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLV 164
Query: 158 TFNAIIAGLAGT---EDGSAKAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEI 214
T+NA+I+G EDG + + M E ++PN L + L C +++L + ++I
Sbjct: 165 TWNAMISGYVENSRPEDG----LKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQI 220
Query: 215 HGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEA 274
H ++ + + L+ Y +CG L +A +F MK++DVVAW+++IS YA HG A
Sbjct: 221 HQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNA 280
Query: 275 RSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSC 334
AL F M K+ PD ITF+AVL AC+HAGL + + YF M +DY ++P DHY+C
Sbjct: 281 DKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTC 340
Query: 335 LVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVELAEIAGRALFEIEPDN 394
+VD+L RAG+L EA +IR MP + +G LLGACR + VELAE A L ++ N
Sbjct: 341 MVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQN 400
Query: 395 PANYVLLARIYASMGRHGE-AXXXXXXXXXXGVKV----APGGSWV 435
A YV LA IYAS R + A VKV PG SW+
Sbjct: 401 AAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVERVKVPGYSWI 446
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 105/252 (41%), Gaps = 36/252 (14%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
L++W ++ +V+ + L +F + + + LS L CS + QLG IH
Sbjct: 163 LVTWNAMISGYVENSRPEDGLKLFRAMLEE-GIRPNSSGLSSALLGCSELSALQLGRQIH 221
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVS 141
K ++ +L+ MY KC A KLF+ + +++VV WNAMIS Y
Sbjct: 222 QIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNAD 281
Query: 142 DALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRA 201
AL +F M + ++P+ IT +A+L A
Sbjct: 282 KALCLFR---------------------------------EMIDNKIRPDWITFVAVLLA 308
Query: 202 CVRMTSLNMIKEIHGCSIRNH-IDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVA 260
C +N+ +R++ ++P P + +V+ GR G L A + +M R A
Sbjct: 309 CNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAA 368
Query: 261 -WSSLISAYALH 271
+ +L+ A +H
Sbjct: 369 VFGTLLGACRVH 380
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/290 (22%), Positives = 120/290 (41%), Gaps = 23/290 (7%)
Query: 111 SARKLFDEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTE 170
A +LFDEIP+ + +N M+S Y + A FD M DA+++N +I G A
Sbjct: 25 EAHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPF-KDAASWNTMITGYARRG 83
Query: 171 DGSAKAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCS-IRNHIDPHPQL 229
+ KA ++ M E N ++ A++ + L + +R +
Sbjct: 84 E-MEKARELFYSMME----KNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVV-----A 133
Query: 230 RSGLVEAYGRCGCLINASNVFYNMK-ERDVVAWSSLISAYALHGEARSALETFHHMEMAK 288
+ ++ Y + + A +F +M +++V W+++IS Y + L+ F M
Sbjct: 134 WTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEG 193
Query: 289 VLPDDITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLS---RAGRL 345
+ P+ + L CS AL ++ Q + + L ++S + G L
Sbjct: 194 IRPNSSGLSSALLGCSELS----ALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGEL 249
Query: 346 YEAYDIIRGMPVKVTVKAWGALLGACRTYGEVELAEIAGRALFE--IEPD 393
+A+ + M K V AW A++ +G + A R + + I PD
Sbjct: 250 GDAWKLFEVMKKKDVV-AWNAMISGYAQHGNADKALCLFREMIDNKIRPD 298
>AT5G39350.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:15750929-15752962 FORWARD
Length = 677
Score = 224 bits (570), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 131/418 (31%), Positives = 208/418 (49%), Gaps = 38/418 (9%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
+I+WT +N + + G + AL + +Q + + ++ ++ C + G +H
Sbjct: 284 VITWTCMINGYTEDGDVENALELCRLMQFE-GVRPNAVTIASLVSVCGDALKVNDGKCLH 342
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVS 141
+++ S+ + +L+ MY KC ++F + + W+A+I+ + VS
Sbjct: 343 GWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVS 402
Query: 142 DALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRA 201
DAL +F RMR ++PN+ TL +LL A
Sbjct: 403 DALGLFK---------------------------------RMRREDVEPNIATLNSLLPA 429
Query: 202 CVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKER----D 257
+ L IH + +GLV Y +CG L +A +F ++E+ D
Sbjct: 430 YAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKD 489
Query: 258 VVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFA 317
VV W +LIS Y +HG+ +AL+ F M + V P++ITF + L ACSH+GL ++ L F
Sbjct: 490 VVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFR 549
Query: 318 RMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEV 377
M + Y S+HY+C+VD+L RAGRL EAY++I +P + T WGALL AC T+ V
Sbjct: 550 FMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTHENV 609
Query: 378 ELAEIAGRALFEIEPDNPANYVLLARIYASMGRHGEAXXXXXXXXXXGVKVAPGGSWV 435
+L E+A LFE+EP+N NYVLLA IYA++GR + G++ PG S +
Sbjct: 610 QLGEMAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRSMMENVGLRKKPGHSTI 667
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 87/355 (24%), Positives = 155/355 (43%), Gaps = 44/355 (12%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVF-NHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAI 80
L+S+ + +V++G + A+ VF + + D Y V K+ + +LG +
Sbjct: 80 LLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLVV 139
Query: 81 HSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCV 140
H ++ F + +V AL+ MY AR +FD + R+V+ WN MIS Y + +
Sbjct: 140 HGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYM 199
Query: 141 SDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLR 200
+DAL MFD W + E S+ + T++++L
Sbjct: 200 NDALMMFD--------------------------------WMVNE-SVDLDHATIVSMLP 226
Query: 201 ACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVA 260
C + L M + +H + ++++ LV Y +CG + A VF M+ RDV+
Sbjct: 227 VCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVIT 286
Query: 261 WSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDA--LDYFAR 318
W+ +I+ Y G+ +ALE M+ V P+ +T +++ C A +D L +A
Sbjct: 287 WTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAV 346
Query: 319 MQQDYGLQPSSDHY--SCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGAC 371
QQ Y SD + L+ + ++ R+ + + G K W A++ C
Sbjct: 347 RQQVY-----SDIIIETSLISMYAKCKRVDLCFRVFSGAS-KYHTGPWSAIIAGC 395
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/360 (24%), Positives = 151/360 (41%), Gaps = 42/360 (11%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
+ISW ++ + + G+ AL++F+ + ++ LD + +L C + ++G +H
Sbjct: 183 VISWNTMISGYYRNGYMNDALMMFDWMVNE-SVDLDHATIVSMLPVCGHLKDLEMGRNVH 241
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVS 141
+ V ALV+MY KC AR +FD + +R+V+ W MI+ YT V
Sbjct: 242 KLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVE 301
Query: 142 DALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRA 201
+AL + M ++PN +T+ +L+
Sbjct: 302 NALELCRLMQFE---------------------------------GVRPNAVTIASLVSV 328
Query: 202 CVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAW 261
C +N K +HG ++R + + + L+ Y +C + VF + W
Sbjct: 329 CGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPW 388
Query: 262 SSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLAD--DALDYFARM 319
S++I+ + AL F M V P+ T ++L A +A LAD A++ +
Sbjct: 389 SAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPA--YAALADLRQAMNIHCYL 446
Query: 320 QQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKA---WGALLGACRTYGE 376
+ G S D + LV V S+ G L A+ I G+ K K WGAL+ +G+
Sbjct: 447 TKT-GFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGD 505
>AT5G16860.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:5543834-5546386 FORWARD
Length = 850
Score = 223 bits (569), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 133/426 (31%), Positives = 207/426 (48%), Gaps = 42/426 (9%)
Query: 20 LRLISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAA 79
+ +++W+ ++ + ++G +AL V + +S + + L VL C+++ G
Sbjct: 328 MDVVTWSAAISGYAQRGLGYEALGVCRQMLSS-GIKPNEVTLISVLSGCASVGALMHGKE 386
Query: 80 IHSHSIKM-------GFLSNPFVACALVDMYGKCVSTFSARKLFDEI--PQRNVVVWNAM 130
IH ++IK G V L+DMY KC +AR +FD + +R+VV W M
Sbjct: 387 IHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVM 446
Query: 131 ISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKP 190
I Y+ + AL + M D T +P
Sbjct: 447 IGGYSQHGDANKALELLSEM-FEEDCQT------------------------------RP 475
Query: 191 NLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSG-LVEAYGRCGCLINASNV 249
N T+ L AC + +L + K+IH ++RN + P S L++ Y +CG + +A V
Sbjct: 476 NAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLV 535
Query: 250 FYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLA 309
F NM ++ V W+SL++ Y +HG AL F M D +T L VL ACSH+G+
Sbjct: 536 FDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMI 595
Query: 310 DDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLG 369
D ++YF RM+ +G+ P +HY+CLVD+L RAGRL A +I MP++ W A L
Sbjct: 596 DQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLS 655
Query: 370 ACRTYGEVELAEIAGRALFEIEPDNPANYVLLARIYASMGRHGEAXXXXXXXXXXGVKVA 429
CR +G+VEL E A + E+ ++ +Y LL+ +YA+ GR + GVK
Sbjct: 656 CCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKR 715
Query: 430 PGGSWV 435
PG SWV
Sbjct: 716 PGCSWV 721
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 108/376 (28%), Positives = 178/376 (47%), Gaps = 22/376 (5%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
++SW + S+ K G + AL +F+ + D L VL C+++ LG +H
Sbjct: 193 VVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLH 252
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVS 141
++ + N FV LVDMY KC A +F + ++VV WNAM++ Y+
Sbjct: 253 CFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFE 312
Query: 142 DALYMFDAMH---VAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLAL 198
DA+ +F+ M + D T++A I+G A G +A+ +M +KPN +TL+++
Sbjct: 313 DAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLG-YEALGVCRQMLSSGIKPNEVTLISV 371
Query: 199 LRACVRMTSLNMIKEIHGCSIRNHID-------PHPQLRSGLVEAYGRCGCLINASNVFY 251
L C + +L KEIH +I+ ID + + L++ Y +C + A +F
Sbjct: 372 LSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFD 431
Query: 252 NM--KERDVVAWSSLISAYALHGEARSALETFHHM--EMAKVLPDDITFLAVLKACSHAG 307
++ KERDVV W+ +I Y+ HG+A ALE M E + P+ T L AC+
Sbjct: 432 SLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLA 491
Query: 308 ---LADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAW 364
+ Y R QQ+ S+ CL+D+ ++ G + +A + M K V W
Sbjct: 492 ALRIGKQIHAYALRNQQNAVPLFVSN---CLIDMYAKCGSISDARLVFDNMMAKNEV-TW 547
Query: 365 GALLGACRTYGEVELA 380
+L+ +G E A
Sbjct: 548 TSLMTGYGMHGYGEEA 563
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 149/316 (47%), Gaps = 37/316 (11%)
Query: 25 WTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIHSHS 84
W + S+ G + L +F + SL+ + D Y V K+C I + G + H+ S
Sbjct: 95 WNSLIRSYGDNGCANKCLYLFG-LMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALS 153
Query: 85 IKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSDAL 144
+ GF+SN FV ALV MY +C S ARK+FDE+ +VV WN++I Y AL
Sbjct: 154 LVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVAL 213
Query: 145 YMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRACVR 204
MF M E +P+ ITL+ +L C
Sbjct: 214 EMFSRM--------------------------------TNEFGCRPDNITLVNVLPPCAS 241
Query: 205 MTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWSSL 264
+ + ++ K++H ++ + + + + + LV+ Y +CG + A+ VF NM +DVV+W+++
Sbjct: 242 LGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAM 301
Query: 265 ISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQDYG 324
++ Y+ G A+ F M+ K+ D +T+ A + + GL +AL R G
Sbjct: 302 VAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALG-VCRQMLSSG 360
Query: 325 LQPSSDHYSCLVDVLS 340
++P+ L+ VLS
Sbjct: 361 IKPNE---VTLISVLS 373
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/343 (25%), Positives = 138/343 (40%), Gaps = 52/343 (15%)
Query: 46 NHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGK 105
+I+ SL + P + + C I + +L IH + G L+ + L+ Y
Sbjct: 16 QYIKVSLFSTSAPEITPPFIHKCKTISQVKL---IHQKLLSFGILTLNLTS-HLISTYIS 71
Query: 106 CVSTFSARKLFDEIPQRNVVV--WNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAII 163
A L P + V WN++I Y + C + LY+F MH
Sbjct: 72 VGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMH------------ 119
Query: 164 AGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHI 223
LS P+ T + +AC ++S+ + H S+
Sbjct: 120 ---------------------SLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGF 158
Query: 224 DPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHH 283
+ + + LV Y RC L +A VF M DVV+W+S+I +YA G+ + ALE F
Sbjct: 159 ISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSR 218
Query: 284 MEMA-KVLPDDITFLAVLKACSHAGLAD--DALDYFA---RMQQDYGLQPSSDHYSCLVD 337
M PD+IT + VL C+ G L FA M Q+ + +CLVD
Sbjct: 219 MTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVG------NCLVD 272
Query: 338 VLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVELA 380
+ ++ G + EA + M VK V +W A++ G E A
Sbjct: 273 MYAKCGMMDEANTVFSNMSVKDVV-SWNAMVAGYSQIGRFEDA 314
>AT3G53360.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:19784502-19786808 FORWARD
Length = 768
Score = 223 bits (568), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 143/486 (29%), Positives = 234/486 (48%), Gaps = 75/486 (15%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSL---DPYVLSLVLKSCSAIHRSQLGA 78
LISW+ + + GF +AL +H++ L+ + + Y+ LK+CS++ R G+
Sbjct: 234 LISWSSIIAGFSQLGFEFEAL---SHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGS 290
Query: 79 AIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSN 138
IH IK N C+L DMY +C SAR++FD+I + + WN +I+ ++
Sbjct: 291 QIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNG 350
Query: 139 CVSDALYMFDAMHVA---PDASTFNAIIAG----LAGTEDGSAKAIAFYWR-MRELSLKP 190
+A+ +F M + PDA + +++ +A ++ + W + +L++
Sbjct: 351 YADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCN 410
Query: 191 NLITLL--------------------------ALLRAC---------VRMTSLNMIKE-- 213
+L+T+ +L AC +R+ L ++ E
Sbjct: 411 SLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECE 470
Query: 214 ---------IHGC---------------SIRNHIDPHPQLRSGLVEAYGRCGCLINASNV 249
+ GC S++ + P +++GL++ Y +CG L A +
Sbjct: 471 PDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRI 530
Query: 250 FYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLA 309
F +M RDVV+WS+LI YA G AL F M+ A + P+ +TF+ VL ACSH GL
Sbjct: 531 FDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLV 590
Query: 310 DDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLG 369
++ L +A MQ ++G+ P+ +H SC+VD+L+RAGRL EA I M ++ V W LL
Sbjct: 591 EEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLS 650
Query: 370 ACRTYGEVELAEIAGRALFEIEPDNPANYVLLARIYASMGRHGEAXXXXXXXXXXGVKVA 429
AC+T G V LA+ A + +I+P N +VLL ++AS G A VK
Sbjct: 651 ACKTQGNVHLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWENAALLRSSMKKHDVKKI 710
Query: 430 PGGSWV 435
PG SW+
Sbjct: 711 PGQSWI 716
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 131/279 (46%), Gaps = 38/279 (13%)
Query: 29 LNSHVKQGFHQQALVVFNHIQ--TSLALSLDPYVLSLVLKSCSAIHRSQLGAAIHSHSIK 86
+NS K F+++AL F+ Q +S + L Y+ SL+ +CS+ G IH H +
Sbjct: 38 INSLCKSNFYREALEAFDFAQKNSSFKIRLRTYI-SLIC-ACSSSRSLAQGRKIHDHILN 95
Query: 87 MGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSDALYM 146
+ + ++ MYGKC S AR++FD +P+RN+V + ++I+ Y+ +
Sbjct: 96 SNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNG-------- 147
Query: 147 FDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRACVRMT 206
A+AI Y +M + L P+ ++++AC +
Sbjct: 148 -------------------------QGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSS 182
Query: 207 SLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWSSLIS 266
+ + K++H I+ H ++ L+ Y R + +AS VFY + +D+++WSS+I+
Sbjct: 183 DVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIA 242
Query: 267 AYALHGEARSALETFHHMEMAKVL-PDDITFLAVLKACS 304
++ G AL M V P++ F + LKACS
Sbjct: 243 GFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACS 281
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/376 (20%), Positives = 159/376 (42%), Gaps = 38/376 (10%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVF-NHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAI 80
L+S+T + + + G +A+ ++ +Q L D + ++K+C++ LG +
Sbjct: 133 LVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVP--DQFAFGSIIKACASSSDVGLGKQL 190
Query: 81 HSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCV 140
H+ IK+ S+ AL+ MY + A ++F IP ++++ W+++I+ ++
Sbjct: 191 HAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLG-- 248
Query: 141 SDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLR 200
+ F+A+ + +F PN + L+
Sbjct: 249 ----FEFEALSHLKEMLSFGV--------------------------FHPNEYIFGSSLK 278
Query: 201 ACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVA 260
AC + + +IHG I++ + + L + Y RCG L +A VF ++ D +
Sbjct: 279 ACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTAS 338
Query: 261 WSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQ 320
W+ +I+ A +G A A+ F M + +PD I+ ++L A + + + +
Sbjct: 339 WNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYII 398
Query: 321 QDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGE-VEL 379
+ +G + L+ + + LY +++ +W +L AC + + VE+
Sbjct: 399 K-WGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEM 457
Query: 380 AEIAGRALF-EIEPDN 394
+ L E EPD+
Sbjct: 458 LRLFKLMLVSECEPDH 473
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 101/204 (49%), Gaps = 14/204 (6%)
Query: 178 AFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAY 237
AF + + S K L T ++L+ AC SL ++IH + ++ L + ++ Y
Sbjct: 53 AFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMY 112
Query: 238 GRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFL 297
G+CG L +A VF M ER++V+++S+I+ Y+ +G+ A+ + M ++PD F
Sbjct: 113 GKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFG 172
Query: 298 AVLKAC---SHAGLADDALDYFARMQQDYGLQPSSDHY---SCLVDVLSRAGRLYEAYDI 351
+++KAC S GL +++ SS H + L+ + R ++ +A +
Sbjct: 173 SIIKACASSSDVGLGKQLHAQVIKLE-------SSSHLIAQNALIAMYVRFNQMSDASRV 225
Query: 352 IRGMPVKVTVKAWGALLGACRTYG 375
G+P+K + +W +++ G
Sbjct: 226 FYGIPMKDLI-SWSSIIAGFSQLG 248
>AT3G15130.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5097153-5099222 REVERSE
Length = 689
Score = 222 bits (566), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 121/417 (29%), Positives = 211/417 (50%), Gaps = 36/417 (8%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQ-TSLALSLDPYVLSLVLKSCSAIHRSQLGAAI 80
LISW + V G+ +AL F +Q ++ D + L+ +LK+CS+ G I
Sbjct: 173 LISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQI 232
Query: 81 HSHSIKMGF--LSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSN 138
H ++ GF S+ + +LVD+Y KC FSARK FD+I ++ ++ W+++I Y
Sbjct: 233 HGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEG 292
Query: 139 CVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLAL 198
+A+ +F R++EL+ + + L ++
Sbjct: 293 EFVEAMGLFK---------------------------------RLQELNSQIDSFALSSI 319
Query: 199 LRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDV 258
+ L K++ +++ + + +V+ Y +CG + A F M+ +DV
Sbjct: 320 IGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDV 379
Query: 259 VAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFAR 318
++W+ +I+ Y HG + ++ F+ M + PD++ +LAVL ACSH+G+ + + F++
Sbjct: 380 ISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSK 439
Query: 319 MQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVE 378
+ + +G++P +HY+C+VD+L RAGRL EA +I MP+K V W LL CR +G++E
Sbjct: 440 LLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIE 499
Query: 379 LAEIAGRALFEIEPDNPANYVLLARIYASMGRHGEAXXXXXXXXXXGVKVAPGGSWV 435
L + G+ L I+ NPANYV+++ +Y G E G+K G SWV
Sbjct: 500 LGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWV 556
Score = 125 bits (314), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 114/426 (26%), Positives = 187/426 (43%), Gaps = 54/426 (12%)
Query: 1 MFCEAKLNQLRIMSYSSNYLR-LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPY 59
M+C+ + + + S R ++SW+ ++ HV G + +L +F+ + + + +
Sbjct: 50 MYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQ-GIYPNEF 108
Query: 60 VLSLVLKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEI 119
S LK+C ++ + G IH +K+GF V +LVDMY KC A K+F I
Sbjct: 109 TFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRI 168
Query: 120 PQRNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAF 179
R+++ WNAMI+ + H+ S AL F M A
Sbjct: 169 VDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEA-------------------------- 202
Query: 180 YWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRN--HIDPHPQLRSGLVEAY 237
+ +P+ TL +LL+AC + K+IHG +R+ H + LV+ Y
Sbjct: 203 -----NIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLY 257
Query: 238 GRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFL 297
+CG L +A F +KE+ +++WSSLI YA GE A+ F ++ D
Sbjct: 258 VKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALS 317
Query: 298 AVLKACSHAGLADDALDYFARMQQDYGLQ-PSSDHYSCL---VDVLSRAGRLYEAYDIIR 353
+++ AD AL + Q ++ PS S L VD+ + G + EA
Sbjct: 318 SIIGV-----FADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFA 372
Query: 354 GMPVKVTVKAWGALLGACRTYGEVELAEIAGRALFE-----IEPDNPANY-VLLARIYAS 407
M +K V +W ++ YG+ L + + R +E IEPD VL A ++
Sbjct: 373 EMQLK-DVISWTVVITG---YGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSG 428
Query: 408 MGRHGE 413
M + GE
Sbjct: 429 MIKEGE 434
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 150/320 (46%), Gaps = 45/320 (14%)
Query: 64 VLKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRN 123
+L+ C+ S G +H + +K G N + L+DMY KC A K+FD +P+RN
Sbjct: 12 ILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERN 71
Query: 124 VVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRM 183
VV W+A++S + + + +L +F M G G
Sbjct: 72 VVSWSALMSGHVLNGDLKGSLSLFSEM--------------GRQG--------------- 102
Query: 184 RELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCL 243
+ PN T L+AC + +L +IHG ++ + ++ + LV+ Y +CG +
Sbjct: 103 ----IYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRI 158
Query: 244 INASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMA--KVLPDDITFLAVLK 301
A VF + +R +++W+++I+ + G AL+TF M+ A K PD+ T ++LK
Sbjct: 159 NEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLK 218
Query: 302 ACSHAGL--ADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLY---EAYDIIRGMP 356
ACS G+ A + F ++ + S+ LVD+ + G L+ +A+D I+
Sbjct: 219 ACSSTGMIYAGKQIHGFL-VRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIK--- 274
Query: 357 VKVTVKAWGALLGACRTYGE 376
+ T+ +W +L+ GE
Sbjct: 275 -EKTMISWSSLILGYAQEGE 293
>AT3G47530.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:17517382-17519157 REVERSE
Length = 591
Score = 222 bits (566), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 124/397 (31%), Positives = 198/397 (49%), Gaps = 31/397 (7%)
Query: 40 QALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACAL 99
+ +F ++ + +L +P S LK C G IH GFLS+ + L
Sbjct: 95 EGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGLQIHGKIFSDGFLSDSLLMTTL 154
Query: 100 VDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTF 159
+D+Y C ++ A K+FDEIP+R+ V WN + S Y + D L +FD M D
Sbjct: 155 MDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGC-- 212
Query: 160 NAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSI 219
+KP+ +T L L+AC + +L+ K++H
Sbjct: 213 ----------------------------VKPDGVTCLLALQACANLGALDFGKQVHDFID 244
Query: 220 RNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALE 279
N + L + LV Y RCG + A VFY M+ER+VV+W++LIS A++G + A+E
Sbjct: 245 ENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIE 304
Query: 280 TFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQ-DYGLQPSSDHYSCLVDV 338
F+ M + P++ T +L ACSH+GL + + +F RM+ ++ ++P+ HY C+VD+
Sbjct: 305 AFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDL 364
Query: 339 LSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVELAEIAGRALFEIEPDNPANY 398
L RA L +AY +I+ M +K W LLGACR +G+VEL E L E++ + +Y
Sbjct: 365 LGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDY 424
Query: 399 VLLARIYASMGRHGEAXXXXXXXXXXGVKVAPGGSWV 435
VLL Y+++G+ + + PG S +
Sbjct: 425 VLLLNTYSTVGKWEKVTELRSLMKEKRIHTKPGCSAI 461
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 116/271 (42%), Gaps = 46/271 (16%)
Query: 23 ISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLS--LVLKSCSAIHRSQLGAAI 80
+SW + +++ + LV+F+ ++ + + P ++ L L++C+ + G +
Sbjct: 180 VSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQV 239
Query: 81 HSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCV 140
H + G ++ LV MY +C S A ++F + +RNVV W A+IS +
Sbjct: 240 HDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFG 299
Query: 141 SDALYMFDAM---HVAPDASTFNAIIAGLAGTEDG-SAKAIAFYWRMR--ELSLKPNLIT 194
+A+ F+ M ++P+ T +++ A + G A+ + F+ RMR E +KPNL
Sbjct: 300 KEAIEAFNEMLKFGISPEEQTLTGLLS--ACSHSGLVAEGMMFFDRMRSGEFKIKPNL-- 355
Query: 195 LLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMK 254
+GC +V+ GR L A ++ +M+
Sbjct: 356 ------------------HHYGC---------------VVDLLGRARLLDKAYSLIKSME 382
Query: 255 ER-DVVAWSSLISAYALHGEARSALETFHHM 284
+ D W +L+ A +HG+ H+
Sbjct: 383 MKPDSTIWRTLLGACRVHGDVELGERVISHL 413
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD
Length = 705
Score = 222 bits (566), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 120/370 (32%), Positives = 197/370 (53%), Gaps = 34/370 (9%)
Query: 98 ALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDAS 157
+V YG+ ARK+FD +P++ V W +M+ Y + + DA +F+ M V P +
Sbjct: 208 TMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVIA 267
Query: 158 TFNAIIAGLAGTEDGSAKAIAFYWRMRELS------------------------------ 187
NA+I+GL G + AKA + M+E +
Sbjct: 268 C-NAMISGL-GQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQ 325
Query: 188 -LKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINA 246
++P TL+++L C + SL+ K++H +R D + S L+ Y +CG L+ +
Sbjct: 326 GVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKS 385
Query: 247 SNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMA-KVLPDDITFLAVLKACSH 305
+F +D++ W+S+IS YA HG AL+ F M ++ P+++TF+A L ACS+
Sbjct: 386 KLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSY 445
Query: 306 AGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWG 365
AG+ ++ L + M+ +G++P + HY+C+VD+L RAGR EA ++I M V+ WG
Sbjct: 446 AGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWG 505
Query: 366 ALLGACRTYGEVELAEIAGRALFEIEPDNPANYVLLARIYASMGRHGEAXXXXXXXXXXG 425
+LLGACRT+ ++++AE + L EIEP+N Y+LL+ +YAS GR +
Sbjct: 506 SLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRL 565
Query: 426 VKVAPGGSWV 435
V+ +PG SW
Sbjct: 566 VRKSPGCSWT 575
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 109/257 (42%), Gaps = 45/257 (17%)
Query: 24 SWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIHSH 83
SW + H + GF +AL +F +Q P ++S +L C+++ G +H+
Sbjct: 298 SWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLIS-ILSVCASLASLHHGKQVHAQ 356
Query: 84 SIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSDA 143
++ F + +VA L+ MY KC ++ +FD P +++++WN++IS Y +A
Sbjct: 357 LVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEA 416
Query: 144 LYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRACV 203
L +F M L+G S KPN +T +A L AC
Sbjct: 417 LKVFCEM--------------PLSG------------------STKPNEVTFVATLSAC- 443
Query: 204 RMTSLNMIKEIHGCSIRNHID------PHPQLRSGLVEAYGRCGCLINASNVFYNMK-ER 256
+ M++E G I ++ P + +V+ GR G A + +M E
Sbjct: 444 --SYAGMVEE--GLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEP 499
Query: 257 DVVAWSSLISAYALHGE 273
D W SL+ A H +
Sbjct: 500 DAAVWGSLLGACRTHSQ 516
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 119/280 (42%), Gaps = 58/280 (20%)
Query: 112 ARKLFDEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTED 171
ARKLFDE+P RN++ WN ++S Y + + +A +FD M + ++ A++ G +
Sbjct: 67 ARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMP-ERNVVSWTALVKGY--VHN 123
Query: 172 GSAK-AIAFYWRMRELSLKPNLITLLALLR------ACV------RMTSLNMIKEIHGCS 218
G A + +W+M E + + L+ L+ AC ++ IHG
Sbjct: 124 GKVDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLC 183
Query: 219 IRNHIDPHPQL------RS-----GLVEAYGRCGCLINASNVFYNMKERDVVAWSSLISA 267
+D ++ RS +V YG+ + +A +F M E+ V+W+S++
Sbjct: 184 KEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMG 243
Query: 268 YALHGEARSALETFHHMEMAKVLP---------------------------DDITFLAVL 300
Y +G A E F M + V+ +D ++ V+
Sbjct: 244 YVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVI 303
Query: 301 KACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLS 340
K G +ALD F MQ+ G++P+ + L+ +LS
Sbjct: 304 KIHERNGFELEALDLFILMQKQ-GVRPT---FPTLISILS 339
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/308 (21%), Positives = 129/308 (41%), Gaps = 67/308 (21%)
Query: 111 SARKLFDEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDAS--TFNAIIAG-LA 167
ARKLFD +++ WN+M++ Y + DA +FD M PD + ++N +++G +
Sbjct: 35 EARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEM---PDRNIISWNGLVSGYMK 91
Query: 168 GTEDGSAKAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHP 227
E A+ + +L + N+++ A
Sbjct: 92 NGEIDEARKVF------DLMPERNVVSWTA------------------------------ 115
Query: 228 QLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMA 287
LV+ Y G + A ++F+ M E++ V+W+ ++ + G A + +
Sbjct: 116 -----LVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLY------ 164
Query: 288 KVLP--DDITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRL 345
+++P D+I +++ G D+A + F M + S ++ +V + R+
Sbjct: 165 EMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSER-----SVITWTTMVTGYGQNNRV 219
Query: 346 YEAYDIIRGMPVKVTVKAWGALLGACRTYGEVELAEIAGRALFEIEPDNPANYVLLARIY 405
+A I MP K V +W ++L G +E AE LFE+ P P + +
Sbjct: 220 DDARKIFDVMPEKTEV-SWTSMLMGYVQNGRIEDAE----ELFEVMPVKPV--IACNAMI 272
Query: 406 ASMGRHGE 413
+ +G+ GE
Sbjct: 273 SGLGQKGE 280
>AT3G14330.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4779688-4782451 REVERSE
Length = 710
Score = 222 bits (565), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 128/413 (30%), Positives = 206/413 (49%), Gaps = 38/413 (9%)
Query: 25 WTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDP--YVLSLVLKSCSAIHRSQLGAAIHS 82
W + + G + AL+V+ + S ++P + +S+ LK+C + ++G IH+
Sbjct: 204 WAAMAIGYSRNGSPRDALIVYVDMLCSF---IEPGNFSISVALKACVDLKDLRVGRGIHA 260
Query: 83 HSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSD 142
+K + V L+ +Y + ARK+FD + +RNVV WN++IS+ + V +
Sbjct: 261 QIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHE 320
Query: 143 ALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRAC 202
+F M + I F W TL +L AC
Sbjct: 321 MFNLFRKMQ----------------------EEMIGFSW-----------ATLTTILPAC 347
Query: 203 VRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWS 262
R+ +L KEIH +++ P L + L++ YG+CG + + VF M +D+ +W+
Sbjct: 348 SRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWN 407
Query: 263 SLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQD 322
+++ YA++G + F M + V PD ITF+A+L CS GL + L F RM+ +
Sbjct: 408 IMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTE 467
Query: 323 YGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVELAEI 382
+ + P+ +HY+CLVD+L RAG++ EA +I MP K + WG+LL +CR +G V + EI
Sbjct: 468 FRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEI 527
Query: 383 AGRALFEIEPDNPANYVLLARIYASMGRHGEAXXXXXXXXXXGVKVAPGGSWV 435
A + LF +EP NP NYV+++ IYA GVK G SWV
Sbjct: 528 AAKELFVLEPHNPGNYVMVSNIYADAKMWDNVDKIREMMKQRGVKKEAGCSWV 580
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/290 (20%), Positives = 112/290 (38%), Gaps = 38/290 (13%)
Query: 92 NPFVACALVDMYGKCVSTFSARKLFDEIPQRNVV---VWNAMISLYTHSNCVSDALYMFD 148
NP + L+ ++ C ARK+FD++ +++ VW AM Y+ + DAL ++
Sbjct: 166 NPKLLSKLITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYV 225
Query: 149 AMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRACVRMTSL 208
M + ++P ++ L+ACV + L
Sbjct: 226 DMLCS---------------------------------FIEPGNFSISVALKACVDLKDL 252
Query: 209 NMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWSSLISAY 268
+ + IH ++ + + L++ Y G +A VF M ER+VV W+SLIS
Sbjct: 253 RVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVL 312
Query: 269 ALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQDYGLQPS 328
+ F M+ + T +L ACS + A++ + +P
Sbjct: 313 SKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKE-KPD 371
Query: 329 SDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVE 378
+ L+D+ + G + + + M K + +W +L G +E
Sbjct: 372 VPLLNSLMDMYGKCGEVEYSRRVFDVMLTK-DLASWNIMLNCYAINGNIE 420
>AT3G02330.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:473881-476592 REVERSE
Length = 861
Score = 222 bits (565), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 131/417 (31%), Positives = 208/417 (49%), Gaps = 22/417 (5%)
Query: 23 ISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIHS 82
+SW + +H + G + L +F + S + D + +LK+C+ G IHS
Sbjct: 407 VSWNAIIAAHEQNGKGYETLFLFVSMLRS-RIEPDEFTFGSILKACTGGSLG-YGMEIHS 464
Query: 83 HSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSD 142
+K G SN V C+L+DMY KC A K+ QR +N VS
Sbjct: 465 SIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQR--------------AN-VSG 509
Query: 143 ALYMFDAMH---VAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALL 199
+ + MH + ++N+II+G E S A + RM E+ + P+ T +L
Sbjct: 510 TMEELEKMHNKRLQEMCVSWNSIISGYVMKEQ-SEDAQMLFTRMMEMGITPDKFTYATVL 568
Query: 200 RACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVV 259
C + S + K+IH I+ + + S LV+ Y +CG L ++ +F RD V
Sbjct: 569 DTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFV 628
Query: 260 AWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARM 319
W+++I YA HG+ A++ F M + + P+ +TF+++L+AC+H GL D L+YF M
Sbjct: 629 TWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMM 688
Query: 320 QQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTY-GEVE 378
++DYGL P HYS +VD+L ++G++ A ++IR MP + W LLG C + VE
Sbjct: 689 KRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVE 748
Query: 379 LAEIAGRALFEIEPDNPANYVLLARIYASMGRHGEAXXXXXXXXXXGVKVAPGGSWV 435
+AE A AL ++P + + Y LL+ +YA G + +K PG SWV
Sbjct: 749 VAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWV 805
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 157/329 (47%), Gaps = 36/329 (10%)
Query: 23 ISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIHS 82
+SW+ + V+ AL F +Q A + + + VL+SC+A+ +LG +H+
Sbjct: 205 VSWSAIIAGCVQNNLLSLALKFFKEMQKVNA-GVSQSIYASVLRSCAALSELRLGGQLHA 263
Query: 83 HSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSD 142
H++K F ++ V A +DMY KC + A+ LFD N +NAMI+ Y+
Sbjct: 264 HALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQ------ 317
Query: 143 ALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRAC 202
E+ KA+ + R+ L + I+L + RAC
Sbjct: 318 ---------------------------EEHGFKALLLFHRLMSSGLGFDEISLSGVFRAC 350
Query: 203 VRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWS 262
+ L+ +I+G +I++ + + + ++ YG+C L A VF M+ RD V+W+
Sbjct: 351 ALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWN 410
Query: 263 SLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQD 322
++I+A+ +G+ L F M +++ PD+ TF ++LKAC+ L ++ + + +
Sbjct: 411 AIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTGGSLG-YGMEIHSSIVKS 469
Query: 323 YGLQPSSDHYSCLVDVLSRAGRLYEAYDI 351
G+ +S L+D+ S+ G + EA I
Sbjct: 470 -GMASNSSVGCSLIDMYSKCGMIEEAEKI 497
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 101/429 (23%), Positives = 187/429 (43%), Gaps = 68/429 (15%)
Query: 7 LNQLRIMSYSSNYLRLISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLK 66
+ +I+ +S L S+ + + ++ +AL++F+ + +S L D LS V +
Sbjct: 290 MQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSS-GLGFDEISLSGVFR 348
Query: 67 SCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVV 126
+C+ + G I+ +IK + VA A +DMYGKC + A ++FDE+ +R+ V
Sbjct: 349 ACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVS 408
Query: 127 WNAMISLYTHSNCVSDALYMFDAM---HVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRM 183
WNA+I+ + + + L++F +M + PD TF +I
Sbjct: 409 WNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSI--------------------- 447
Query: 184 RELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCL 243
L+AC SL EIH +++ + + + L++ Y +CG +
Sbjct: 448 ---------------LKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMI 491
Query: 244 INA----------SNVFYNMKERD----------VVAWSSLISAYALHGEARSALETFHH 283
A +NV M+E + V+W+S+IS Y + ++ A F
Sbjct: 492 EEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTR 551
Query: 284 MEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSC--LVDVLSR 341
M + PD T+ VL C++ A A++ + + SD Y C LVD+ S+
Sbjct: 552 MMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKK---ELQSDVYICSTLVDMYSK 608
Query: 342 AGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVELA-EIAGRALFEIEPDNPANYVL 400
G L+++ ++ ++ W A++ +G+ E A ++ R + E N ++
Sbjct: 609 CGDLHDSR-LMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFIS 667
Query: 401 LARIYASMG 409
+ R A MG
Sbjct: 668 ILRACAHMG 676
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/361 (21%), Positives = 160/361 (44%), Gaps = 48/361 (13%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
++SW L+ +++ G +++ VF + + D +++LK CS + + LG IH
Sbjct: 103 VVSWNSMLSGYLQNGESLKSIEVFVDMGRE-GIEFDGRTFAIILKVCSFLEDTSLGMQIH 161
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVS 141
+++G ++ A AL+DMY K + ++F IP++N V W+A+I+ +N +S
Sbjct: 162 GIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLS 221
Query: 142 DALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRA 201
AL F M +A +I A ++LR+
Sbjct: 222 LALKFFKEMQ-KVNAGVSQSIYA--------------------------------SVLRS 248
Query: 202 CVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAW 261
C ++ L + ++H ++++ +R+ ++ Y +C + +A +F N + + ++
Sbjct: 249 CAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSY 308
Query: 262 SSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQ 321
+++I+ Y+ AL FH + + + D+I+ V +AC+ + L Q
Sbjct: 309 NAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGL-------Q 361
Query: 322 DYGLQPSSDHY------SCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYG 375
YGL S + +D+ + L EA+ + M + V +W A++ A G
Sbjct: 362 IYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAV-SWNAIIAAHEQNG 420
Query: 376 E 376
+
Sbjct: 421 K 421
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 113/230 (49%), Gaps = 2/230 (0%)
Query: 75 QLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLY 134
+LG H+H I GF FV L+ +Y SA +FD++P R+VV WN MI+ Y
Sbjct: 23 ELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGY 82
Query: 135 THSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLIT 194
+ SN + A F+ M V D ++N++++G + S K+I + M ++ + T
Sbjct: 83 SKSNDMFKANSFFNMMPV-RDVVSWNSMLSGYLQNGE-SLKSIEVFVDMGREGIEFDGRT 140
Query: 195 LLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMK 254
+L+ C + ++ +IHG +R D S L++ Y + + + VF +
Sbjct: 141 FAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIP 200
Query: 255 ERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACS 304
E++ V+WS++I+ + AL+ F M+ + +VL++C+
Sbjct: 201 EKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCA 250
>AT5G06540.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1999181-2001049 REVERSE
Length = 622
Score = 221 bits (564), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 123/379 (32%), Positives = 204/379 (53%), Gaps = 2/379 (0%)
Query: 57 DPYVLSLVLKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLF 116
D ++K+ S + +G HS ++ GF ++ +V +LV MY C +A ++F
Sbjct: 116 DNITFPFLIKASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIF 175
Query: 117 DEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKA 176
++ R+VV W +M++ Y V +A MFD M + T++ +I G A + KA
Sbjct: 176 GQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEM-PHRNLFTWSIMINGYA-KNNCFEKA 233
Query: 177 IAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEA 236
I + M+ + N +++++ +C + +L + + +++H+ + L + LV+
Sbjct: 234 IDLFEFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDM 293
Query: 237 YGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITF 296
+ RCG + A +VF + E D ++WSS+I A+HG A A+ F M +P D+TF
Sbjct: 294 FWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTF 353
Query: 297 LAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMP 356
AVL ACSH GL + L+ + M++D+G++P +HY C+VD+L RAG+L EA + I M
Sbjct: 354 TAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMH 413
Query: 357 VKVTVKAWGALLGACRTYGEVELAEIAGRALFEIEPDNPANYVLLARIYASMGRHGEAXX 416
VK GALLGAC+ Y E+AE G L +++P++ YVLL+ IYA G+ +
Sbjct: 414 VKPNAPILGALLGACKIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIES 473
Query: 417 XXXXXXXXGVKVAPGGSWV 435
VK PG S +
Sbjct: 474 LRDMMKEKLVKKPPGWSLI 492
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/356 (21%), Positives = 147/356 (41%), Gaps = 88/356 (24%)
Query: 64 VLKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCV--STFS--------AR 113
+L+SCS+ ++ IH ++ +S+ FVA L+ + CV STF+ A
Sbjct: 18 LLQSCSSFSDLKI---IHGFLLRTHLISDVFVASRLLAL---CVDDSTFNKPTNLLGYAY 71
Query: 114 KLFDEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGS 173
+F +I N+ V+N +I ++ G E
Sbjct: 72 GIFSQIQNPNLFVFNLLIRCFS-------------------------------TGAE--P 98
Query: 174 AKAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGL 233
+KA FY +M + + P+ IT L++A M + + ++ H +R + + L
Sbjct: 99 SKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGEQTHSQIVRFGFQNDVYVENSL 158
Query: 234 VEAYGRCGCLINASNVFYNMKERDVVAWSSLISAYA------------------------ 269
V Y CG + A +F M RDVV+W+S+++ Y
Sbjct: 159 VHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWS 218
Query: 270 --LHGEARS-----ALETFHHMEMAKVLPDDITFLAVLKACSHAG---LADDALDYFARM 319
++G A++ A++ F M+ V+ ++ ++V+ +C+H G + A +Y +
Sbjct: 219 IMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKS 278
Query: 320 QQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYG 375
L + LVD+ R G + +A + G+P ++ +W +++ +G
Sbjct: 279 HMTVNLILG----TALVDMFWRCGDIEKAIHVFEGLPETDSL-SWSSIIKGLAVHG 329
>AT1G56690.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:21253817-21255931 FORWARD
Length = 704
Score = 221 bits (564), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 116/354 (32%), Positives = 188/354 (53%), Gaps = 31/354 (8%)
Query: 112 ARKLFDEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTED 171
ARKLF+ +P++ V W +M+ YT S + DA F+ M + P + NA+I G +
Sbjct: 222 ARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIAC-NAMIVGFGEVGE 280
Query: 172 GSA------------------------------KAIAFYWRMRELSLKPNLITLLALLRA 201
S +A+ + +M++ ++P+ +L+++L
Sbjct: 281 ISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSV 340
Query: 202 CVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAW 261
C + SL +++H +R D + S L+ Y +CG L+ A VF +D++ W
Sbjct: 341 CATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMW 400
Query: 262 SSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQ 321
+S+IS YA HG AL+ FH M + +P+ +T +A+L ACS+AG ++ L+ F M+
Sbjct: 401 NSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMES 460
Query: 322 DYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVELAE 381
+ + P+ +HYSC VD+L RAG++ +A ++I M +K WGALLGAC+T+ ++LAE
Sbjct: 461 KFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAE 520
Query: 382 IAGRALFEIEPDNPANYVLLARIYASMGRHGEAXXXXXXXXXXGVKVAPGGSWV 435
+A + LFE EPDN YVLL+ I AS + G+ V PG SW+
Sbjct: 521 VAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWI 574
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 107/250 (42%), Gaps = 36/250 (14%)
Query: 24 SWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIHSH 83
+W + ++ ++GF +AL +F +Q P ++S +L C+ + Q G +H+H
Sbjct: 298 TWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLIS-ILSVCATLASLQYGRQVHAH 356
Query: 84 SIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSDA 143
++ F + +VA L+ MY KC A+ +FD +++++WN++IS Y +A
Sbjct: 357 LVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEA 416
Query: 144 LYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRACV 203
L +F H P + T PN +TL+A+L AC
Sbjct: 417 LKIF---HEMPSSGTM------------------------------PNKVTLIAILTACS 443
Query: 204 RMTSLNMIKEI-HGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKER-DVVAW 261
L EI + + P + S V+ GR G + A + +M + D W
Sbjct: 444 YAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVW 503
Query: 262 SSLISAYALH 271
+L+ A H
Sbjct: 504 GALLGACKTH 513
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 117/288 (40%), Gaps = 72/288 (25%)
Query: 111 SARKLFDEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTE 170
AR+LFDE+ +RNVV WN ++S Y + + +A +F+ M + ++ A++ G E
Sbjct: 66 EARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMP-ERNVVSWTAMVKGYM-QE 123
Query: 171 DGSAKAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLR 230
+A + +WRM E N ++ + + ++ ++++ + +
Sbjct: 124 GMVGEAESLFWRMPE----RNEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMI 179
Query: 231 SGLVEAYGRCGCLINASNVFYNMKERDVVAWSSLIS------------------------ 266
GL R G + A +F M+ER+VV W+++I+
Sbjct: 180 GGLC----REGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEV 235
Query: 267 -------AYALHGEARSALETFHHMEMAKVLP---------------------------D 292
Y L G A E F M M V+ D
Sbjct: 236 SWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRD 295
Query: 293 DITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLS 340
+ T+ ++KA G +ALD FA+MQ+ G++PS + L+ +LS
Sbjct: 296 NATWRGMIKAYERKGFELEALDLFAQMQKQ-GVRPS---FPSLISILS 339
>AT1G13410.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 17 plant
structures; EXPRESSED DURING: 8 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT4G02750.1); Has 13539 Blast hits to 4793
proteins in 111 species: Archae - 0; Bacteria - 0;
Metazoa - 25; Fungi - 35; Plants - 13298; Viruses - 0;
Other Eukaryotes - 181 (source: NCBI BLink). |
chr1:4601526-4603174 FORWARD
Length = 474
Score = 221 bits (563), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 119/343 (34%), Positives = 189/343 (55%), Gaps = 10/343 (2%)
Query: 98 ALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDAS 157
++ Y + + AR LFD++P R+V+ WN ++ Y + + +FD M P+ +
Sbjct: 95 TMISGYIEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDM---PERN 151
Query: 158 TF--NAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIH 215
F N +I G A S +F + E S+ PN T+ +L AC ++ + + K +H
Sbjct: 152 VFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVH 211
Query: 216 --GCSIR-NHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHG 272
G ++ N +D + +++ L++ YG+CG + A VF +K RD+++W+++I+ A HG
Sbjct: 212 KYGETLGYNKVDVN--VKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHG 269
Query: 273 EARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHY 332
AL FH M+ + + PD +TF+ VL AC H GL +D L YF M D+ + P +H
Sbjct: 270 HGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHC 329
Query: 333 SCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVELAEIAGRALFEIEP 392
C+VD+LSRAG L +A + I MPVK W LLGA + Y +V++ E+A L ++EP
Sbjct: 330 GCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVALEELIKLEP 389
Query: 393 DNPANYVLLARIYASMGRHGEAXXXXXXXXXXGVKVAPGGSWV 435
NPAN+V+L+ IY GR +A G K G SW+
Sbjct: 390 RNPANFVMLSNIYGDAGRFDDAARLKVAMRDTGFKKEAGVSWI 432
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/323 (22%), Positives = 134/323 (41%), Gaps = 62/323 (19%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
+ SW + + + G + L F + ++ + ++LVL +C+ + G +H
Sbjct: 152 VFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVH 211
Query: 82 SHSIKMGFLS-NPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCV 140
+ +G+ + V AL+DMYGKC + A ++F I +R+++ WN MI+
Sbjct: 212 KYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHG 271
Query: 141 SDALYMFDAMH---VAPDASTFNAIIAG---LAGTEDGSAKAIAFYWRMRELSLKPNLIT 194
++AL +F M ++PD TF ++ + EDG +A++ M
Sbjct: 272 TEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDG----LAYFNSM----------- 316
Query: 195 LLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMK 254
T +++ EI C +V+ R G L A M
Sbjct: 317 ----------FTDFSIMPEIEHCGC-------------VVDLLSRAGFLTQAVEFINKMP 353
Query: 255 ER-DVVAWSSLISAYALHGE---ARSALETFHHMEMAKVLP-DDITFLAVLKACSHAGLA 309
+ D V W++L+ A ++ + ALE E+ K+ P + F+ + AG
Sbjct: 354 VKADAVIWATLLGASKVYKKVDIGEVALE-----ELIKLEPRNPANFVMLSNIYGDAGRF 408
Query: 310 DDALDYFARMQ---QDYGLQPSS 329
DDA AR++ +D G + +
Sbjct: 409 DDA----ARLKVAMRDTGFKKEA 427
>AT5G52630.1 | Symbols: MEF1 | MEF1 (MITOCHONDRIAL RNA EDITING
FACTOR 1) | chr5:21350375-21352141 FORWARD
Length = 588
Score = 221 bits (563), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 131/382 (34%), Positives = 198/382 (51%), Gaps = 34/382 (8%)
Query: 54 LSLDPYVLSLVLKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSAR 113
L D +VL KSC+ + R +G ++H S+K G+ ++ FV +LVDMY KC AR
Sbjct: 112 LRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYAR 171
Query: 114 KLFDEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGS 173
K+FDE+PQRNVV W+ M+ Y +AL++F A+ LA
Sbjct: 172 KMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFK-----------EALFENLA------ 214
Query: 174 AKAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGL 233
N + +++ C T L + ++IHG SI++ D + S L
Sbjct: 215 ----------------VNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSL 258
Query: 234 VEAYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDD 293
V Y +CG A VF + +++ W++++ AYA H + +E F M+++ + P+
Sbjct: 259 VSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNF 318
Query: 294 ITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIR 353
ITFL VL ACSHAGL D+ YF +M++ ++P+ HY+ LVD+L RAGRL EA ++I
Sbjct: 319 ITFLNVLNACSHAGLVDEGRYYFDQMKESR-IEPTDKHYASLVDMLGRAGRLQEALEVIT 377
Query: 354 GMPVKVTVKAWGALLGACRTYGEVELAEIAGRALFEIEPDNPANYVLLARIYASMGRHGE 413
MP+ T WGALL +C + ELA A +FE+ P + ++ L+ YA+ GR +
Sbjct: 378 NMPIDPTESVWGALLTSCTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFED 437
Query: 414 AXXXXXXXXXXGVKVAPGGSWV 435
A G K G SWV
Sbjct: 438 AAKARKLLRDRGEKKETGLSWV 459
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 140/309 (45%), Gaps = 48/309 (15%)
Query: 69 SAIHRSQL-GAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVW 127
SA RS + G +H + +K G P VA L++ Y K F +R+ F++ PQ++ W
Sbjct: 25 SARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSSTTW 84
Query: 128 NAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELS 187
+++IS + + + +M ++ F +M +
Sbjct: 85 SSIISCFAQN----ELPWM-----------------------------SLEFLKKMMAGN 111
Query: 188 LKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINAS 247
L+P+ L + ++C ++ ++ + +H S++ D + S LV+ Y +CG ++ A
Sbjct: 112 LRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYAR 171
Query: 248 NVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAG 307
+F M +R+VV WS ++ YA GE AL F + +D +F +V+ C+++
Sbjct: 172 KMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANST 231
Query: 308 LADDALDYFARMQQDYGL------QPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTV 361
L + +Q +GL SS S LV + S+ G AY + +PVK +
Sbjct: 232 LLELG-------RQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVK-NL 283
Query: 362 KAWGALLGA 370
W A+L A
Sbjct: 284 GIWNAMLKA 292
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 127/291 (43%), Gaps = 47/291 (16%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
+++W+ + + + G +++AL +F L+++ Y S V+ C+ +LG IH
Sbjct: 182 VVTWSGMMYGYAQMGENEEALWLFKEALFE-NLAVNDYSFSSVISVCANSTLLELGRQIH 240
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYT-HSNCV 140
SIK F S+ FV +LV +Y KC A ++F+E+P +N+ +WNAM+ Y HS+
Sbjct: 241 GLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSH-- 298
Query: 141 SDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLR 200
+ K I + RM+ +KPN IT L +L
Sbjct: 299 --------------------------------TQKVIELFKRMKLSGMKPNFITFLNVLN 326
Query: 201 ACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMK-ERDVV 259
AC ++ + + I+P + + LV+ GR G L A V NM +
Sbjct: 327 ACSHAGLVDEGRYYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTES 386
Query: 260 AWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLAD 310
W +L+++ +H + E+A D + L + + H L++
Sbjct: 387 VWGALLTSCTVH----------KNTELAAFAADKVFELGPVSSGMHISLSN 427
>AT1G31430.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11254025-11255737 REVERSE
Length = 570
Score = 221 bits (562), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 131/417 (31%), Positives = 215/417 (51%), Gaps = 6/417 (1%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
++SW ++S+V G + A+ VF + L D + L +CSA+ ++G I+
Sbjct: 112 VVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIY 171
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVS 141
+ F + + ALVDM+ KC AR +FD + +NV W +M+ Y + +
Sbjct: 172 RFVVTE-FEMSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRID 230
Query: 142 DALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRA 201
+A +F+ V D + A++ G + +A+ + M+ ++P+ L++LL
Sbjct: 231 EARVLFERSPV-KDVVLWTAMMNGYVQF-NRFDEALELFRCMQTAGIRPDNFVLVSLLTG 288
Query: 202 CVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAW 261
C + +L K IHG N + + + LV+ Y +CGC+ A VFY +KERD +W
Sbjct: 289 CAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASW 348
Query: 262 SSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQ 321
+SLI A++G + AL+ ++ ME V D ITF+AVL AC+H G + F M +
Sbjct: 349 TSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTE 408
Query: 322 DYGLQPSSDHYSCLVDVLSRAGRLYEAYDII---RGMPVKVTVKAWGALLGACRTYGEVE 378
+ +QP S+H SCL+D+L RAG L EA ++I RG + V + +LL A R YG V+
Sbjct: 409 RHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVK 468
Query: 379 LAEIAGRALFEIEPDNPANYVLLARIYASMGRHGEAXXXXXXXXXXGVKVAPGGSWV 435
+AE L ++E + + + LLA +YAS R + G++ PG S +
Sbjct: 469 IAERVAEKLEKVEVSDSSAHTLLASVYASANRWEDVTNVRRKMKDLGIRKFPGCSSI 525
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 94/406 (23%), Positives = 178/406 (43%), Gaps = 80/406 (19%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
L+ + K L S + L +F ++ L D + L +VLKS + + G +H
Sbjct: 11 LLMYNKMLKSLADGKSFTKVLALFGELRGQ-GLYPDNFTLPVVLKSIGRLRKVIEGEKVH 69
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVS 141
+++K G + +V+ +L+ MY K+FDE+PQR+VV WN +IS Y +
Sbjct: 70 GYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFE 129
Query: 142 DALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRA 201
DA+ +F M +E +LK + T+++ L A
Sbjct: 130 DAIGVFKRMS--------------------------------QESNLKFDEGTIVSTLSA 157
Query: 202 CVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAW 261
C + +L + + I+ + + ++ + LV+ + +CGCL A VF +M++++V W
Sbjct: 158 CSALKNLEIGERIYRFVV-TEFEMSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCW 216
Query: 262 SSLISAYALHG---EAR----------------------------SALETFHHMEMAKVL 290
+S++ Y G EAR ALE F M+ A +
Sbjct: 217 TSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIR 276
Query: 291 PDDITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHY--SCLVDVLSRAGRLYEA 348
PD+ +++L C+ G + + ++ + + D + LVD+ ++ G + A
Sbjct: 277 PDNFVLVSLLTGCAQTGALEQGKWIHGYINEN---RVTVDKVVGTALVDMYAKCGCIETA 333
Query: 349 YDIIRGMPVKVTVKAWGALLGACRTYGEVELAEIAGRAL---FEIE 391
++ + + T +W +L+ YG + + ++GRAL +E+E
Sbjct: 334 LEVFYEIKERDTA-SWTSLI-----YG-LAMNGMSGRALDLYYEME 372
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 128/290 (44%), Gaps = 39/290 (13%)
Query: 5 AKLNQLRIMSYSSNYLRLISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLV 64
++++ R++ S ++ WT +N +V+ +AL +F +QT+ + D +VL +
Sbjct: 227 GRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTA-GIRPDNFVLVSL 285
Query: 65 LKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNV 124
L C+ + G IH + + + V ALVDMY KC +A ++F EI +R+
Sbjct: 286 LTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDT 345
Query: 125 VVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMR 184
W ++I + + G++G +A+ Y+ M
Sbjct: 346 ASWTSLI---------------------------YGLAMNGMSG------RALDLYYEME 372
Query: 185 ELSLKPNLITLLALLRACVRMTSLNMIKEI-HGCSIRNHIDPHPQLRSGLVEAYGRCGCL 243
+ ++ + IT +A+L AC + ++I H + R+++ P + S L++ R G L
Sbjct: 373 NVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLL 432
Query: 244 INASNVFYNMK----ERDVVAWSSLISAYALHGEARSALETFHHMEMAKV 289
A + M+ E V + SL+SA +G + A +E +V
Sbjct: 433 DEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEV 482
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 122/284 (42%), Gaps = 24/284 (8%)
Query: 153 APDASTFNAIIAGLAGTEDGSA--KAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNM 210
P +N ++ LA DG + K +A + +R L P+ TL +L++ R+ +
Sbjct: 8 TPSLLMYNKMLKSLA---DGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIE 64
Query: 211 IKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWSSLISAYAL 270
+++HG +++ ++ + + L+ Y G + VF M +RDVV+W+ LIS+Y
Sbjct: 65 GEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVG 124
Query: 271 HGEARSALETFHHMEMAKVLP-DDITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSS 329
+G A+ F M L D+ T ++ L ACS AL ++ Y +
Sbjct: 125 NGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACS-------ALKNLEIGERIYRFVVTE 177
Query: 330 DHYS-----CLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVELAEIAG 384
S LVD+ + G L +A + M K VK W +++ + G ++ A
Sbjct: 178 FEMSVRIGNALVDMFCKCGCLDKARAVFDSMRDK-NVKCWTSMVFGYVSTGRIDEA---- 232
Query: 385 RALFEIEP-DNPANYVLLARIYASMGRHGEAXXXXXXXXXXGVK 427
R LFE P + + + Y R EA G++
Sbjct: 233 RVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIR 276
>AT1G05750.1 | Symbols: PDE247, CLB19 | PDE247 (pigment defective
247) | chr1:1721523-1723025 FORWARD
Length = 500
Score = 221 bits (562), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 134/417 (32%), Positives = 218/417 (52%), Gaps = 11/417 (2%)
Query: 23 ISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLV--LKSCSAIHRSQ--LGA 78
+SWT ++N + G +A F+ + + ++P ++ + L C LG
Sbjct: 37 VSWTSRINLLTRNGRLAEAAKEFSDMTLA---GVEPNHITFIALLSGCGDFTSGSEALGD 93
Query: 79 AIHSHSIKMGFLSN-PFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHS 137
+H ++ K+G N V A++ MY K AR +FD + +N V WN MI Y S
Sbjct: 94 LLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRS 153
Query: 138 NCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLA 197
V +A MFD M D ++ A+I G + +A+ ++ M+ +KP+ + ++A
Sbjct: 154 GQVDNAAKMFDKMP-ERDLISWTAMINGFV-KKGYQEEALLWFREMQISGVKPDYVAIIA 211
Query: 198 LLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERD 257
L AC + +L+ +H + + ++ + L++ Y RCGC+ A VFYNM++R
Sbjct: 212 ALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRT 271
Query: 258 VVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFA 317
VV+W+S+I +A +G A +L F M+ PD +TF L ACSH GL ++ L YF
Sbjct: 272 VVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQ 331
Query: 318 RMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYG-E 376
M+ DY + P +HY CLVD+ SRAGRL +A +++ MP+K G+LL AC +G
Sbjct: 332 IMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHGNN 391
Query: 377 VELAEIAGRALFEIEPDNPANYVLLARIYASMGRHGEAXXXXXXXXXXGVKVAPGGS 433
+ LAE + L ++ + +NYV+L+ +YA+ G+ A G+K PG S
Sbjct: 392 IVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFS 448
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 115/258 (44%), Gaps = 46/258 (17%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
LISWT +N VK+G+ ++AL+ F +Q S + D + L +C+ + G +H
Sbjct: 171 LISWTAMINGFVKKGYQEEALLWFREMQIS-GVKPDYVAIIAALNACTNLGALSFGLWVH 229
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVS 141
+ + F +N V+ +L+D+Y +C AR++F + +R VV WN++I + +
Sbjct: 230 RYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAH 289
Query: 142 DALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRA 201
++L F +M+E KP+ +T L A
Sbjct: 290 ESLVYFR---------------------------------KMQEKGFKPDAVTFTGALTA 316
Query: 202 CVRMTSLNMIKE------IHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKE 255
C + + +++E I C R I P + LV+ Y R G L +A + +M
Sbjct: 317 C---SHVGLVEEGLRYFQIMKCDYR--ISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPM 371
Query: 256 R-DVVAWSSLISAYALHG 272
+ + V SL++A + HG
Sbjct: 372 KPNEVVIGSLLAACSNHG 389
>AT2G21090.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9045695-9047488 REVERSE
Length = 597
Score = 220 bits (560), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 123/390 (31%), Positives = 205/390 (52%), Gaps = 4/390 (1%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
++SW + + + G +AL + + S + + + + +L +C + QL H
Sbjct: 144 VVSWNTMVIGYAQDGNLHEALWFYKEFRRS-GIKFNEFSFAGLLTACVKSRQLQLNRQAH 202
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVS 141
+ GFLSN ++C+++D Y KC SA++ FDE+ +++ +W +IS Y +
Sbjct: 203 GQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDME 262
Query: 142 DALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRA 201
A +F M + ++ A+IAG G+ +A+ + +M L +KP T + L A
Sbjct: 263 AAEKLFCEM-PEKNPVSWTALIAGYVRQGSGN-RALDLFRKMIALGVKPEQFTFSSCLCA 320
Query: 202 CVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKER-DVVA 260
+ SL KEIHG IR ++ P+ + S L++ Y + G L + VF ++ D V
Sbjct: 321 SASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVF 380
Query: 261 WSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQ 320
W+++ISA A HG AL M +V P+ T + +L ACSH+GL ++ L +F M
Sbjct: 381 WNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMT 440
Query: 321 QDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVELA 380
+G+ P +HY+CL+D+L RAG E I MP + W A+LG CR +G EL
Sbjct: 441 VQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDKHIWNAILGVCRIHGNEELG 500
Query: 381 EIAGRALFEIEPDNPANYVLLARIYASMGR 410
+ A L +++P++ A Y+LL+ IYA G+
Sbjct: 501 KKAADELIKLDPESSAPYILLSSIYADHGK 530
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 110/417 (26%), Positives = 180/417 (43%), Gaps = 58/417 (13%)
Query: 29 LNSHVKQGFHQQALVVFNHI-QTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIHSHSIKM 87
L+ H + QA+ + Q + L D +L+ +L+ C + G IH H
Sbjct: 18 LSKHATKAELSQAVSRLESLTQQGIRLPFD--LLASLLQQCGDTKSLKQGKWIHRHLKIT 75
Query: 88 GF-LSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSDALYM 146
GF N ++ L+ MY KC A K+FD++ RN+ WN M+S Y S + A +
Sbjct: 76 GFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVV 135
Query: 147 FDAMHVAPDASTFNAIIAGLAGTEDGSA-KAIAFYWRMRELSLKPNLITLLALLRACVRM 205
FD+M D ++N ++ G A +DG+ +A+ FY R +K N + LL ACV+
Sbjct: 136 FDSM-PERDVVSWNTMVIGYA--QDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKS 192
Query: 206 TSLNMIKEIHG--------------CSIRNHIDPHPQLRSG-----------------LV 234
L + ++ HG CSI + Q+ S L+
Sbjct: 193 RQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLI 252
Query: 235 EAYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDI 294
Y + G + A +F M E++ V+W++LI+ Y G AL+ F M V P+
Sbjct: 253 SGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQF 312
Query: 295 TFLAVLKACSHAGLA-----DDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAY 349
TF + L C+ A +A + Y R ++P++ S L+D+ S++G L +
Sbjct: 313 TFSSCL--CASASIASLRHGKEIHGYMIRTN----VRPNAIVISSLIDMYSKSGSLEASE 366
Query: 350 DIIRGMPVKVTVKAWGALLGACRTYGEVELAEIAGRAL-----FEIEPDNPANYVLL 401
+ R K W ++ A +G L A R L F ++P+ V+L
Sbjct: 367 RVFRICDDKHDCVFWNTMISALAQHG---LGHKALRMLDDMIKFRVQPNRTTLVVIL 420
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 85/198 (42%), Gaps = 7/198 (3%)
Query: 231 SGLVEAYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVL 290
+ +V Y + G L+ A VF +M ERDVV+W++++ YA G AL + + +
Sbjct: 117 NNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIK 176
Query: 291 PDDITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSC-LVDVLSRAGRLYEAY 349
++ +F +L AC + L+ A Q S+ SC ++D ++ G++ A
Sbjct: 177 FNEFSFAGLLTACVKSRQLQ--LNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAK 234
Query: 350 DIIRGMPVKVTVKAWGALLGACRTYGEVELAEIAGRALFEIEPDNPANYVLLARIYASMG 409
M VK + W L+ G++E AE + E+ NP ++ L Y G
Sbjct: 235 RCFDEMTVK-DIHIWTTLISGYAKLGDMEAAE---KLFCEMPEKNPVSWTALIAGYVRQG 290
Query: 410 RHGEAXXXXXXXXXXGVK 427
A GVK
Sbjct: 291 SGNRALDLFRKMIALGVK 308
>AT1G25360.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:8894428-8896800 FORWARD
Length = 790
Score = 220 bits (560), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 124/417 (29%), Positives = 219/417 (52%), Gaps = 6/417 (1%)
Query: 20 LRLISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAA 79
++L+++ ++ +V +GF+Q+AL + + +S + LD + V+++C+ QLG
Sbjct: 249 MKLVAYNAMISGYVNRGFYQEALEMVRRMVSS-GIELDEFTYPSVIRACATAGLLQLGKQ 307
Query: 80 IHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNC 139
+H++ ++ S F +LV +Y KC AR +F+++P +++V WNA++S Y S
Sbjct: 308 VHAYVLRREDFSFHFDN-SLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGH 366
Query: 140 VSDALYMFDAMHVAPDASTFNAIIAGLAGTEDG-SAKAIAFYWRMRELSLKPNLITLLAL 198
+ +A +F M + ++ +I+GLA E+G + + + M+ +P
Sbjct: 367 IGEAKLIFKEMK-EKNILSWMIMISGLA--ENGFGEEGLKLFSCMKREGFEPCDYAFSGA 423
Query: 199 LRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDV 258
+++C + + ++ H ++ D + L+ Y +CG + A VF M D
Sbjct: 424 IKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDS 483
Query: 259 VAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFAR 318
V+W++LI+A HG A++ + M + PD IT L VL ACSHAGL D YF
Sbjct: 484 VSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDS 543
Query: 319 MQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVE 378
M+ Y + P +DHY+ L+D+L R+G+ +A +I +P K T + W ALL CR +G +E
Sbjct: 544 METVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNME 603
Query: 379 LAEIAGRALFEIEPDNPANYVLLARIYASMGRHGEAXXXXXXXXXXGVKVAPGGSWV 435
L IA LF + P++ Y+LL+ ++A+ G+ E GVK SW+
Sbjct: 604 LGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWI 660
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 91/368 (24%), Positives = 161/368 (43%), Gaps = 50/368 (13%)
Query: 65 LKSCSAIHRS--QLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQR 122
L+ C + R+ QL A+H + I GF + L+D+Y K AR+LFDEI +
Sbjct: 19 LRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEP 78
Query: 123 NVVVWNAMISLYTHSNCVSDALYMFDAMHVA-PDASTFNAIIAGLAGTEDGSAKAIAFYW 181
+ + M+S Y S ++ A +F+ V D +NA+I G + DG + AI +
Sbjct: 79 DKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYS-AINLFC 137
Query: 182 RMRELSLKPNLITLLALLRACVRMT-SLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRC 240
+M+ KP+ T ++L + + H ++++ + + LV Y +C
Sbjct: 138 KMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKC 197
Query: 241 GC----LINASNVFYNMKERD--------------------------------VVAWSSL 264
L +A VF + E+D +VA++++
Sbjct: 198 ASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAM 257
Query: 265 ISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLAD--DALDYFARMQQD 322
IS Y G + ALE M + + D+ T+ +V++AC+ AGL + + ++D
Sbjct: 258 ISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRRED 317
Query: 323 YGLQPSSDHY-SCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVELAE 381
+ S H+ + LV + + G+ EA I MP K V +W ALL + G + A+
Sbjct: 318 F-----SFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLV-SWNALLSGYVSSGHIGEAK 371
Query: 382 IAGRALFE 389
+ + + E
Sbjct: 372 LIFKEMKE 379
>AT5G66520.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:26551879-26553741 FORWARD
Length = 620
Score = 220 bits (560), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 126/380 (33%), Positives = 201/380 (52%), Gaps = 2/380 (0%)
Query: 57 DPYVLSLVLKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLF 116
+ Y +LK+CS + + IH+ K+G+ ++ + +L++ Y + A LF
Sbjct: 114 NAYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLF 173
Query: 117 DEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKA 176
D IP+ + V WN++I Y + + AL +F M +A ++ +I+G D + +A
Sbjct: 174 DRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKM-AEKNAISWTTMISGYVQA-DMNKEA 231
Query: 177 IAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEA 236
+ + M+ ++P+ ++L L AC ++ +L K IH + I L L++
Sbjct: 232 LQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDM 291
Query: 237 YGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITF 296
Y +CG + A VF N+K++ V AW++LIS YA HG R A+ F M+ + P+ ITF
Sbjct: 292 YAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITF 351
Query: 297 LAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMP 356
AVL ACS+ GL ++ F M++DY L+P+ +HY C+VD+L RAG L EA I+ MP
Sbjct: 352 TAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMP 411
Query: 357 VKVTVKAWGALLGACRTYGEVELAEIAGRALFEIEPDNPANYVLLARIYASMGRHGEAXX 416
+K WGALL ACR + +EL E G L I+P + YV A I+A + +A
Sbjct: 412 LKPNAVIWGALLKACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAE 471
Query: 417 XXXXXXXXGVKVAPGGSWVT 436
GV PG S ++
Sbjct: 472 TRRLMKEQGVAKVPGCSTIS 491
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 78/362 (21%), Positives = 149/362 (41%), Gaps = 66/362 (18%)
Query: 45 FNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYG 104
N I S +L + Y L+ CS + + IH+ +K G + + + A+
Sbjct: 1 MNVISCSFSLEHNLYETMSCLQRCS---KQEELKQIHARMLKTGLMQDSY---AITKFLS 54
Query: 105 KCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIA 164
C+S+ S+ D +P +V FD PD +N +I
Sbjct: 55 FCISSTSS----DFLPYAQIV---------------------FDGFD-RPDTFLWNLMIR 88
Query: 165 GLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHG-------- 216
G + + D +++ Y RM S N T +LL+AC +++ +IH
Sbjct: 89 GFSCS-DEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYE 147
Query: 217 ---CSIRNHID------------------PHPQLRS--GLVEAYGRCGCLINASNVFYNM 253
++ + I+ P P S +++ Y + G + A +F M
Sbjct: 148 NDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKM 207
Query: 254 KERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDAL 313
E++ ++W+++IS Y + AL+ FH M+ + V PD+++ L AC+ G +
Sbjct: 208 AEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQG- 266
Query: 314 DYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRT 373
+ ++ S L+D+ ++ G + EA ++ + + K +V+AW AL+
Sbjct: 267 KWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIK-KKSVQAWTALISGYAY 325
Query: 374 YG 375
+G
Sbjct: 326 HG 327
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 116/304 (38%), Gaps = 80/304 (26%)
Query: 23 ISWTKQLNSHVKQG-------------------------------FHQQALVVFNHIQTS 51
+SW + +VK G +++AL +F+ +Q S
Sbjct: 182 VSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNS 241
Query: 52 LALSLDPYVLSLVLKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFS 111
+ D L+ L +C+ + + G IHS+ K + + C L+DMY KC
Sbjct: 242 -DVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEE 300
Query: 112 ARKLFDEIPQRNVVVWNAMISLYTHSNCVSDALYMF---DAMHVAPDASTFNAIIAGLAG 168
A ++F I +++V W A+IS Y + +A+ F M + P+ TF A++ +
Sbjct: 301 ALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSY 360
Query: 169 TEDGSAKAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQ 228
T + FY R+ +LKP + E +GC
Sbjct: 361 TGLVEEGKLIFYSMERDYNLKPTI--------------------EHYGC----------- 389
Query: 229 LRSGLVEAYGRCGCLINASNVFYNMKER-DVVAWSSLISAYALH---------GEARSAL 278
+V+ GR G L A M + + V W +L+ A +H GE A+
Sbjct: 390 ----IVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIAI 445
Query: 279 ETFH 282
+ +H
Sbjct: 446 DPYH 449
>AT4G30700.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:14962617-14964995 REVERSE
Length = 792
Score = 219 bits (559), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 126/410 (30%), Positives = 202/410 (49%), Gaps = 37/410 (9%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
++++ ++ + G + +L +F + S A ++SLV S + L AIH
Sbjct: 287 IVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLM----LIYAIH 342
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVS 141
+ +K FLS+ V+ AL +Y K SARKLFDE P++++ WNAMIS YT +
Sbjct: 343 GYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTE 402
Query: 142 DALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRA 201
DA I+ + M++ PN +T+ +L A
Sbjct: 403 DA---------------------------------ISLFREMQKSEFSPNPVTITCILSA 429
Query: 202 CVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAW 261
C ++ +L++ K +H + + + L+ Y +CG + A +F M +++ V W
Sbjct: 430 CAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTW 489
Query: 262 SSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQ 321
+++IS Y LHG+ + AL F+ M + + P +TFL VL ACSHAGL + + F M
Sbjct: 490 NTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIH 549
Query: 322 DYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVELAE 381
YG +PS HY+C+VD+L RAG L A I M ++ W LLGACR + + LA
Sbjct: 550 RYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLAR 609
Query: 382 IAGRALFEIEPDNPANYVLLARIYASMGRHGEAXXXXXXXXXXGVKVAPG 431
LFE++PDN +VLL+ I+++ + +A + APG
Sbjct: 610 TVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPG 659
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 75/354 (21%), Positives = 148/354 (41%), Gaps = 38/354 (10%)
Query: 23 ISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIHS 82
I W ++ + K + +++ VF + LD L +L + + + +LG IHS
Sbjct: 186 ILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHS 245
Query: 83 HSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSD 142
+ K G S+ +V + +Y KC LF E + ++V +NAMI YT +
Sbjct: 246 LATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETEL 305
Query: 143 ALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRAC 202
+L +F + L+G R+R L++L+ +
Sbjct: 306 SLSLFKELM--------------LSGA------------RLR----SSTLVSLVPV---- 331
Query: 203 VRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWS 262
L +I IHG ++++ H + + L Y + + +A +F E+ + +W+
Sbjct: 332 --SGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWN 389
Query: 263 SLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQD 322
++IS Y +G A+ F M+ ++ P+ +T +L AC+ G A + + +
Sbjct: 390 AMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLG-ALSLGKWVHDLVRS 448
Query: 323 YGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGE 376
+ S + L+ + ++ G + EA + M K V W ++ +G+
Sbjct: 449 TDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEV-TWNTMISGYGLHGQ 501
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 129/304 (42%), Gaps = 47/304 (15%)
Query: 5 AKLNQL---RIMSYSSNYLRLISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVL 61
+KLN++ R + S L SW ++ + + G + A+ +F +Q S S +P +
Sbjct: 365 SKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKS-EFSPNPVTI 423
Query: 62 SLVLKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQ 121
+ +L +C+ + LG +H F S+ +V+ AL+ MY KC S AR+LFD + +
Sbjct: 424 TCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTK 483
Query: 122 RNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYW 181
+N V WN MIS Y GL G +A+ ++
Sbjct: 484 KNEVTWNTMISGY------------------------------GLHGQ---GQEALNIFY 510
Query: 182 RMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSI-RNHIDPHPQLRSGLVEAYGRC 240
M + P +T L +L AC + EI I R +P + + +V+ GR
Sbjct: 511 EMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRA 570
Query: 241 GCLINASNVFYNMK-ERDVVAWSSLISAYALHGE---ARSALETFHHMEMAKVLPDDITF 296
G L A M E W +L+ A +H + AR+ E ++ PD++ +
Sbjct: 571 GHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELD-----PDNVGY 625
Query: 297 LAVL 300
+L
Sbjct: 626 HVLL 629
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 112/265 (42%), Gaps = 32/265 (12%)
Query: 41 ALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALV 100
+L VF H++ S L + + + + S + G IH ++ G S + +V
Sbjct: 102 SLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIV 161
Query: 101 DMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFN 160
MY K ARK+FD +P+++ ++WN MIS Y + +++ +F +
Sbjct: 162 KMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDL---------- 211
Query: 161 AIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIR 220
+ E + + TLL +L A + L + +IH + +
Sbjct: 212 ----------------------INESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATK 249
Query: 221 NHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALET 280
H + +G + Y +CG + S +F ++ D+VA++++I Y +GE +L
Sbjct: 250 TGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSL 309
Query: 281 FHHMEMAKVLPDDITFLAVLKACSH 305
F + ++ T ++++ H
Sbjct: 310 FKELMLSGARLRSSTLVSLVPVSGH 334
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 95/235 (40%), Gaps = 17/235 (7%)
Query: 154 PDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKE 213
PD FN ++ G + E + F + LKPN T + A +
Sbjct: 81 PDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRV 140
Query: 214 IHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGE 273
IHG ++ + D L S +V+ Y + + +A VF M E+D + W+++IS Y +
Sbjct: 141 IHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEM 200
Query: 274 ARSALETFHHM--EMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDH 331
+++ F + E L D T L +L A + L Q + L +
Sbjct: 201 YVESIQVFRDLINESCTRL-DTTTLLDILPAVAE-------LQELRLGMQIHSLATKTGC 252
Query: 332 YS------CLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVELA 380
YS + + S+ G++ + R K + A+ A++ + GE EL+
Sbjct: 253 YSHDYVLTGFISLYSKCGKIKMGSALFREFR-KPDIVAYNAMIHGYTSNGETELS 306
>AT1G19720.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:6819926-6822610 REVERSE
Length = 894
Score = 219 bits (559), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 128/471 (27%), Positives = 228/471 (48%), Gaps = 39/471 (8%)
Query: 3 CEAKLNQLRIMSYSSNYLRLISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLS 62
C+A ++ ++ M + +WT ++ + G QAL +F + + + ++S
Sbjct: 298 CDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMS 357
Query: 63 LVLKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQR 122
V +CS + G+ +HS ++KMGF+ + V +LVDMY KC ARK+FD + +
Sbjct: 358 AV-SACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNK 416
Query: 123 NVVVWNAMISLYTHSNCVSDALYMFDAMHVA---PDASTFNAIIAG-LAGTEDGSA---- 174
+V WN+MI+ Y + A +F M A P+ T+N +I+G + ++G A
Sbjct: 417 DVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLF 476
Query: 175 ------------------------------KAIAFYWRMRELSLKPNLITLLALLRACVR 204
+A+ + +M+ PN +T+L+LL AC
Sbjct: 477 QRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACAN 536
Query: 205 MTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWSSL 264
+ M++EIHGC +R ++D +++ L + Y + G + + +F M+ +D++ W+SL
Sbjct: 537 LLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSL 596
Query: 265 ISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQDYG 324
I Y LHG AL F+ M+ + P+ T +++ A G D+ F + DY
Sbjct: 597 IGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYH 656
Query: 325 LQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVELAEIAG 384
+ P+ +H S +V + RA RL EA I+ M ++ W + L CR +G++++A A
Sbjct: 657 IIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQSETPIWESFLTGCRIHGDIDMAIHAA 716
Query: 385 RALFEIEPDNPANYVLLARIYASMGRHGEAXXXXXXXXXXGVKVAPGGSWV 435
LF +EP+N A ++++IYA + G + +K G SW+
Sbjct: 717 ENLFSLEPENTATESIVSQIYALGAKLGRSLEGNKPRRDNLLKKPLGQSWI 767
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 94/393 (23%), Positives = 179/393 (45%), Gaps = 47/393 (11%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
L +W+ + ++ ++ ++ +F + L D ++ +L+ C+ + G IH
Sbjct: 146 LFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLP-DDFLFPKILQGCANCGDVEAGKVIH 204
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVS 141
S IK+G S V+ +++ +Y KC A K F + +R+V+ WN+++ Y +
Sbjct: 205 SVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHE 264
Query: 142 DALYMFDAMH---VAPDASTFNAIIAG-------------LAGTEDGSAKAIAFYWR--- 182
+A+ + M ++P T+N +I G + E A F W
Sbjct: 265 EAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMI 324
Query: 183 -------MRELSLK-----------PNLITLLALLRACVRMTSLNMIKEIHGCSIRNHID 224
MR +L PN +T+++ + AC + +N E+H +++
Sbjct: 325 SGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFI 384
Query: 225 PHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHM 284
+ + LV+ Y +CG L +A VF ++K +DV W+S+I+ Y G A E F M
Sbjct: 385 DDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRM 444
Query: 285 EMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGR 344
+ A + P+ IT+ ++ G +A+D F RM++D +Q ++ ++ ++ + G+
Sbjct: 445 QDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGK 504
Query: 345 LYEAYDIIRG------MPVKVTVKAWGALLGAC 371
EA ++ R MP VT+ +LL AC
Sbjct: 505 KDEALELFRKMQFSRFMPNSVTIL---SLLPAC 534
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 129/297 (43%), Gaps = 45/297 (15%)
Query: 64 VLKSCSAIHRSQLGAAIHSHSIKMGFLSNP--FVACALVDMYGKCVSTFSARKLFDEIPQ 121
+L+SC LG +H+ + G + P FV L+ MY KC ARK+FD + +
Sbjct: 87 LLESCIDSGSIHLGRILHA---RFGLFTEPDVFVETKLLSMYAKCGCIADARKVFDSMRE 143
Query: 122 RNVVVWNAMISLYTHSNCVSDALYMFDAMH---VAPDASTFNAIIAGLAGTEDGSAKAIA 178
RN+ W+AMI Y+ N + +F M V PD F I+ G A D A +
Sbjct: 144 RNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKV- 202
Query: 179 FYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYG 238
IH I+ + ++ + ++ Y
Sbjct: 203 -----------------------------------IHSVVIKLGMSSCLRVSNSILAVYA 227
Query: 239 RCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLA 298
+CG L A+ F M+ERDV+AW+S++ AY +G+ A+E ME + P +T+
Sbjct: 228 KCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNI 287
Query: 299 VLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGM 355
++ + G D A+D +M+ +G+ ++ ++ L G Y+A D+ R M
Sbjct: 288 LIGGYNQLGKCDAAMDLMQKMET-FGITADVFTWTAMISGLIHNGMRYQALDMFRKM 343
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD
Length = 786
Score = 219 bits (559), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 132/418 (31%), Positives = 223/418 (53%), Gaps = 7/418 (1%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
+++W ++ ++G+ +AL +F+ + LS D + L+ VL +C+ + + +G IH
Sbjct: 243 IVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIH 302
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVV--WNAMISLYTHSNC 139
SH + GF + V AL+ MY +C +AR+L ++ +++ + + A++ Y
Sbjct: 303 SHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGD 362
Query: 140 VSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGS-AKAIAFYWRMRELSLKPNLITLLAL 198
++ A +F ++ D + A+I G + GS +AI + M +PN TL A+
Sbjct: 363 MNQAKNIFVSLK-DRDVVAWTAMIVGYE--QHGSYGEAINLFRSMVGGGQRPNSYTLAAM 419
Query: 199 LRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMK-ERD 257
L + SL+ K+IHG ++++ + + L+ Y + G + +AS F ++ ERD
Sbjct: 420 LSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERD 479
Query: 258 VVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFA 317
V+W+S+I A A HG A ALE F M M + PD IT++ V AC+HAGL + YF
Sbjct: 480 TVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFD 539
Query: 318 RMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEV 377
M+ + P+ HY+C+VD+ RAG L EA + I MP++ V WG+LL ACR + +
Sbjct: 540 MMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNI 599
Query: 378 ELAEIAGRALFEIEPDNPANYVLLARIYASMGRHGEAXXXXXXXXXXGVKVAPGGSWV 435
+L ++A L +EP+N Y LA +Y++ G+ EA VK G SW+
Sbjct: 600 DLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWI 657
Score = 114 bits (286), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 140/311 (45%), Gaps = 37/311 (11%)
Query: 23 ISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIHS 82
+SWT + + G + +A+ V + + + L+ VL S +A + G +HS
Sbjct: 112 VSWTTMIVGYKNIGQYHKAIRVMGDM-VKEGIEPTQFTLTNVLASVAATRCMETGKKVHS 170
Query: 83 HSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSD 142
+K+G N V+ +L++MY KC A+ +FD + R++ WNAMI+L+ +
Sbjct: 171 FIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDL 230
Query: 143 ALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRM-RELSLKPNLITLLALLRA 201
A+ F+ M D T+N++I+G +A+ + +M R+ L P+ TL ++L A
Sbjct: 231 AMAQFEQM-AERDIVTWNSMISGF-NQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSA 288
Query: 202 CVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGC------------------- 242
C + L + K+IH + D + + L+ Y RCG
Sbjct: 289 CANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIE 348
Query: 243 --------------LINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAK 288
+ A N+F ++K+RDVVAW+++I Y HG A+ F M
Sbjct: 349 GFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGG 408
Query: 289 VLPDDITFLAV 299
P+ T A+
Sbjct: 409 QRPNSYTLAAM 419
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 135/296 (45%), Gaps = 17/296 (5%)
Query: 58 PYVLSLVLKSCSAIHRSQLGAA--------IHSHSIKMGFLSNPFVACALVDMYGKCVST 109
P LS +L+ C+ + + + + +H IK G + + ++ L+++Y K
Sbjct: 6 PLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYA 65
Query: 110 FSARKLFDEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGT 169
ARKLFDE+P R WN ++S Y+ + FD + D+ ++ +I G
Sbjct: 66 LHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLP-QRDSVSWTTMIVGYKNI 124
Query: 170 EDGSAKAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQL 229
KAI M + ++P TL +L + + K++H ++ + + +
Sbjct: 125 GQ-YHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSV 183
Query: 230 RSGLVEAYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKV 289
+ L+ Y +CG + A VF M RD+ +W+++I+ + G+ A+ F M
Sbjct: 184 SNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQM----A 239
Query: 290 LPDDITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRL 345
D +T+ +++ + G ALD F++M +D L P D ++ L VLS L
Sbjct: 240 ERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSP--DRFT-LASVLSACANL 292
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 132/313 (42%), Gaps = 59/313 (18%)
Query: 7 LNQLRIMSYSSNYLRLISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLK 66
+NQ + + S +++WT + + + G + +A+ +F + + Y L+ +L
Sbjct: 363 MNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSM-VGGGQRPNSYTLAAMLS 421
Query: 67 SCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIP-QRNVV 125
S++ G IH ++K G + + V+ AL+ MY K + SA + FD I +R+ V
Sbjct: 422 VASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTV 481
Query: 126 VWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRE 185
W +MI +AL +F+ M ++ G
Sbjct: 482 SWTSMIIALAQHGHAEEALELFETM-----------LMEG-------------------- 510
Query: 186 LSLKPNLITLLALLRACVRMTSLN-------MIKEIHGCSIRNHIDPHPQLRSGLVEAYG 238
L+P+ IT + + AC +N M+K++ + I P + +V+ +G
Sbjct: 511 --LRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDV------DKIIPTLSHYACMVDLFG 562
Query: 239 RCGCLINASNVFYNMK-ERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFL 297
R G L A M E DVV W SL+SA +H ++++ KV + + L
Sbjct: 563 RAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVH----------KNIDLGKVAAERLLLL 612
Query: 298 AVLKACSHAGLAD 310
+ +++ LA+
Sbjct: 613 EPENSGAYSALAN 625
>AT3G12770.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4056900-4059193 REVERSE
Length = 719
Score = 219 bits (558), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 127/415 (30%), Positives = 216/415 (52%), Gaps = 37/415 (8%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
++SWT ++++ + G +AL +F+ ++ + + D L VL + + + + G +IH
Sbjct: 187 IVSWTAIVSAYAQNGEPMEALEIFSQMR-KMDVKPDWVALVSVLNAFTCLQDLKQGRSIH 245
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVS 141
+ +KMG P + +L MY KC +A+ LFD++ N+++
Sbjct: 246 ASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLIL--------------- 290
Query: 142 DALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAK-AIAFYWRMRELSLKPNLITLLALLR 200
+NA+I+G A ++G A+ AI + M ++P+ I++ + +
Sbjct: 291 -----------------WNAMISGYA--KNGYAREAIDMFHEMINKDVRPDTISITSAIS 331
Query: 201 ACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVA 260
AC ++ SL + ++ R+ + S L++ + +CG + A VF +RDVV
Sbjct: 332 ACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVV 391
Query: 261 WSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQ 320
WS++I Y LHG AR A+ + ME V P+D+TFL +L AC+H+G+ + +F RM
Sbjct: 392 WSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMA 451
Query: 321 QDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVELA 380
D+ + P HY+C++D+L RAG L +AY++I+ MPV+ V WGALL AC+ + VEL
Sbjct: 452 -DHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELG 510
Query: 381 EIAGRALFEIEPDNPANYVLLARIYASMGRHGEAXXXXXXXXXXGVKVAPGGSWV 435
E A + LF I+P N +YV L+ +YA+ G+ G SWV
Sbjct: 511 EYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWV 565
Score = 138 bits (347), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 87/353 (24%), Positives = 169/353 (47%), Gaps = 44/353 (12%)
Query: 21 RLISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAI 80
++ W + + + Q AL++++++Q + +S D + +LK+CS + Q+G +
Sbjct: 83 QIFPWNAIIRGYSRNNHFQDALLMYSNMQLA-RVSPDSFTFPHLLKACSGLSHLQMGRFV 141
Query: 81 HSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFD--EIPQRNVVVWNAMISLYTHSN 138
H+ ++GF ++ FV L+ +Y KC SAR +F+ +P+R +V W A++S Y +
Sbjct: 142 HAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNG 201
Query: 139 CVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLAL 198
+AL +F +MR++ +KP+ + L+++
Sbjct: 202 EPMEALEIFS---------------------------------QMRKMDVKPDWVALVSV 228
Query: 199 LRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDV 258
L A + L + IH ++ ++ P L L Y +CG + A +F MK ++
Sbjct: 229 LNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNL 288
Query: 259 VAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFAR 318
+ W+++IS YA +G AR A++ FH M V PD I+ + + AC+ G + A +
Sbjct: 289 ILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEY 348
Query: 319 M-QQDYGLQPSSDHY--SCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALL 368
+ + DY D + S L+D+ ++ G + E ++ + V W A++
Sbjct: 349 VGRSDY----RDDVFISSALIDMFAKCGSV-EGARLVFDRTLDRDVVVWSAMI 396
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 118/255 (46%), Gaps = 39/255 (15%)
Query: 50 TSLALSLDPYVLSLVLKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVST 109
T+ + D + SL+ SA H++QL IH+ + +G + F+ L+
Sbjct: 14 TNSGIHSDSFYASLI---DSATHKAQL-KQIHARLLVLGLQFSGFLITKLIHASSSFGDI 69
Query: 110 FSARKLFDEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGT 169
AR++FD++P+ + WNA+I Y+ +N DAL M+ M +A
Sbjct: 70 TFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLA---------------- 113
Query: 170 EDGSAKAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQL 229
+ P+ T LL+AC ++ L M + +H R D +
Sbjct: 114 -----------------RVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFV 156
Query: 230 RSGLVEAYGRCGCLINASNVFYN--MKERDVVAWSSLISAYALHGEARSALETFHHMEMA 287
++GL+ Y +C L +A VF + ER +V+W++++SAYA +GE ALE F M
Sbjct: 157 QNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKM 216
Query: 288 KVLPDDITFLAVLKA 302
V PD + ++VL A
Sbjct: 217 DVKPDWVALVSVLNA 231
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 88/170 (51%), Gaps = 8/170 (4%)
Query: 229 LRSGLVEAYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAK 288
L + L+ A G + A VF ++ + W+++I Y+ + + AL + +M++A+
Sbjct: 55 LITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLAR 114
Query: 289 VLPDDITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHY--SCLVDVLSRAGRLY 346
V PD TF +LKACS GL+ + F Q + L +D + + L+ + ++ RL
Sbjct: 115 VSPDSFTFPHLLKACS--GLSHLQMGRFVHAQV-FRLGFDADVFVQNGLIALYAKCRRLG 171
Query: 347 EAYDIIRGMPV-KVTVKAWGALLGACRTYGE-VELAEIAGRAL-FEIEPD 393
A + G+P+ + T+ +W A++ A GE +E EI + +++PD
Sbjct: 172 SARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPD 221
>AT1G56570.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:21195804-21197721 FORWARD
Length = 611
Score = 219 bits (557), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 120/415 (28%), Positives = 207/415 (49%), Gaps = 37/415 (8%)
Query: 23 ISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIHS 82
++WT + G L ++ + A + PY +++ +++ ++I G IH+
Sbjct: 179 VTWTTLITGFTHLGDGIGGLKMYKQMLLENA-EVTPYCITIAVRASASIDSVTTGKQIHA 237
Query: 83 HSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSD 142
IK GF SN V +++D+Y +C A+ F E+ ++++ WN +IS S+
Sbjct: 238 SVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISELERSD---- 293
Query: 143 ALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRAC 202
S++A+ + R PN T +L+ AC
Sbjct: 294 ------------------------------SSEALLMFQRFESQGFVPNCYTFTSLVAAC 323
Query: 203 VRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNM-KERDVVAW 261
+ +LN +++HG R + + +L + L++ Y +CG + ++ VF + R++V+W
Sbjct: 324 ANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSW 383
Query: 262 SSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQ 321
+S++ Y HG A+E F M + + PD I F+AVL AC HAGL + L YF M+
Sbjct: 384 TSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMES 443
Query: 322 DYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVEL-A 380
+YG+ P D Y+C+VD+L RAG++ EAY+++ MP K WGA+LGAC+ + L +
Sbjct: 444 EYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAILGACKAHKHNGLIS 503
Query: 381 EIAGRALFEIEPDNPANYVLLARIYASMGRHGEAXXXXXXXXXXGVKVAPGGSWV 435
+A R + E++P YV+L+ IYA+ G+ + G K G SW+
Sbjct: 504 RLAARKVMELKPKMVGTYVMLSYIYAAEGKWVDFARVRKMMRMMGNKKEAGMSWI 558
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/355 (21%), Positives = 156/355 (43%), Gaps = 37/355 (10%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
+++WT + + ++ +A F H S + + LS VLKSC + GA +H
Sbjct: 76 VVAWTAMITGYASSNYNARAWECF-HEMVKQGTSPNEFTLSSVLKSCRNMKVLAYGALVH 134
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKL-FDEIPQRNVVVWNAMISLYTHSNCV 140
+K+G + +V A+++MY C T A L F +I +N V W +I+ +TH
Sbjct: 135 GVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRDIKVKNDVTWTTLITGFTHLGDG 194
Query: 141 SDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLR 200
L M+ M + + P IT+ +R
Sbjct: 195 IGGLKMYKQM-------------------------------LLENAEVTPYCITIA--VR 221
Query: 201 ACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVA 260
A + S+ K+IH I+ + + + +++ Y RCG L A + F+ M+++D++
Sbjct: 222 ASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLIT 281
Query: 261 WSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQ 320
W++LIS ++ AL F E +P+ TF +++ AC++ + R+
Sbjct: 282 WNTLISELE-RSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIF 340
Query: 321 QDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYG 375
+ G + + + L+D+ ++ G + ++ + + + + +W +++ ++G
Sbjct: 341 RR-GFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHG 394
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 114/260 (43%), Gaps = 40/260 (15%)
Query: 112 ARKLFDEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTED 171
AR LFDE+P R+VV W AMI+ Y SN +NA
Sbjct: 64 ARSLFDEMPDRDVVAWTAMITGYASSN--------------------YNA---------- 93
Query: 172 GSAKAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRS 231
+A + M + PN TL ++L++C M L +HG ++ ++ + +
Sbjct: 94 ---RAWECFHEMVKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDN 150
Query: 232 GLVEAYGRCGCLINASN-VFYNMKERDVVAWSSLISAYALHGEARSALETFHHM--EMAK 288
++ Y C + A+ +F ++K ++ V W++LI+ + G+ L+ + M E A+
Sbjct: 151 AMMNMYATCSVTMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAE 210
Query: 289 VLPDDITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEA 348
V P IT +AV + S + + + +++ G Q + + ++D+ R G L EA
Sbjct: 211 VTPYCIT-IAVRASASIDSVTTGKQIHASVIKR--GFQSNLPVMNSILDLYCRCGYLSEA 267
Query: 349 YDIIRGMPVKVTVKAWGALL 368
M K + W L+
Sbjct: 268 KHYFHEMEDKDLI-TWNTLI 286
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 77/147 (52%), Gaps = 6/147 (4%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
LI+W L S +++ +AL++F + S + Y + ++ +C+ I G +H
Sbjct: 279 LITWN-TLISELERSDSSEALLMFQRFE-SQGFVPNCYTFTSLVAACANIAALNCGQQLH 336
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEI-PQRNVVVWNAMISLYTHSNCV 140
+ GF N +A AL+DMY KC + ++++F EI +RN+V W +M+ Y
Sbjct: 337 GRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYG 396
Query: 141 SDALYMFDAM---HVAPDASTFNAIIA 164
++A+ +FD M + PD F A+++
Sbjct: 397 AEAVELFDKMVSSGIRPDRIVFMAVLS 423
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 44/80 (55%)
Query: 226 HPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHME 285
H L + L+ +Y G + A ++F M +RDVVAW+++I+ YA A E FH M
Sbjct: 44 HHILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMV 103
Query: 286 MAKVLPDDITFLAVLKACSH 305
P++ T +VLK+C +
Sbjct: 104 KQGTSPNEFTLSSVLKSCRN 123
>AT5G40405.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT5G66520.1); Has
12548 Blast hits to 5076 proteins in 168 species: Archae
- 0; Bacteria - 2; Metazoa - 87; Fungi - 66; Plants -
12146; Viruses - 0; Other Eukaryotes - 247 (source: NCBI
BLink). | chr5:16169315-16171153 FORWARD
Length = 612
Score = 219 bits (557), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 125/413 (30%), Positives = 216/413 (52%), Gaps = 3/413 (0%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTS-LALSLDPYVLSLVLKSCSAIHRSQLGAAI 80
L + + +H K +++ + I +S L D Y ++ ++++C+ + + G +
Sbjct: 71 LFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQV 130
Query: 81 HSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCV 140
H +I+ GF ++P V L+ +Y + S K+F+ IP + V AM++ V
Sbjct: 131 HGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDV 190
Query: 141 SDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLR 200
A +F+ M D +NA+I+G A + S +A+ + M+ +K N + ++++L
Sbjct: 191 VFARKLFEGM-PERDPIAWNAMISGYAQVGE-SREALNVFHLMQLEGVKVNGVAMISVLS 248
Query: 201 ACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVA 260
AC ++ +L+ + H RN I +L + LV+ Y +CG + A VF+ M+E++V
Sbjct: 249 ACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYT 308
Query: 261 WSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQ 320
WSS ++ A++G LE F M+ V P+ +TF++VL+ CS G D+ +F M+
Sbjct: 309 WSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMR 368
Query: 321 QDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVELA 380
++G++P +HY CLVD+ +RAGRL +A II+ MP+K W +LL A R Y +EL
Sbjct: 369 NEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLELG 428
Query: 381 EIAGRALFEIEPDNPANYVLLARIYASMGRHGEAXXXXXXXXXXGVKVAPGGS 433
+A + + E+E N YVLL+ IYA GV+ PG S
Sbjct: 429 VLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCS 481
>AT1G09190.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: shoot apex, sperm cell,
embryo, flower, seed; EXPRESSED DURING: petal
differentiation and expansion stage, D bilateral stage,
E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT5G56310.1); Has
12606 Blast hits to 4809 proteins in 101 species: Archae
- 0; Bacteria - 0; Metazoa - 13; Fungi - 33; Plants -
12368; Viruses - 0; Other Eukaryotes - 192 (source: NCBI
BLink). | chr1:2966263-2967717 REVERSE
Length = 484
Score = 218 bits (556), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 123/373 (32%), Positives = 208/373 (55%), Gaps = 5/373 (1%)
Query: 40 QALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACAL 99
++L F+ ++ S + D Y + +LKSCS++ + G +H I+ GF + +
Sbjct: 85 ESLSFFSSMK-SRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGV 143
Query: 100 VDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTF 159
V++Y A+K+FDE+ +RNVVVWN MI + S V L++F M S +
Sbjct: 144 VELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVS-W 202
Query: 160 NAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSI 219
N++I+ L+ +A+ + M + P+ T++ +L + L+ K IH +
Sbjct: 203 NSMISSLSKC-GRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAE 261
Query: 220 RNHI-DPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSAL 278
+ + + + LV+ Y + G L A+ +F M+ R+VV+W++LIS A++G+ +
Sbjct: 262 SSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGI 321
Query: 279 ETFHHM-EMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVD 337
+ F M E KV P++ TFL VL CS+ G + + F M + + L+ ++HY +VD
Sbjct: 322 DLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVD 381
Query: 338 VLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVELAEIAGRALFEIEPDNPAN 397
++SR+GR+ EA+ ++ MPV WG+LL ACR++G+V+LAE+A L +IEP N N
Sbjct: 382 LMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSHGDVKLAEVAAMELVKIEPGNSGN 441
Query: 398 YVLLARIYASMGR 410
YVLL+ +YA GR
Sbjct: 442 YVLLSNLYAEEGR 454
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 105/248 (42%), Gaps = 38/248 (15%)
Query: 80 IHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNC 139
IH+H ++ + + + + G ++ A ++F I NV+V+NAMI Y+
Sbjct: 23 IHAHLLRHFLHGSNLLLAHFISICGSLSNSDYANRVFSHIQNPNVLVFNAMIKCYSL--- 79
Query: 140 VSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALL 199
V P ++++F+ M+ + + T LL
Sbjct: 80 ------------VGP------------------PLESLSFFSSMKSRGIWADEYTYAPLL 109
Query: 200 RACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVV 259
++C ++ L K +HG IR ++R G+VE Y G + +A VF M ER+VV
Sbjct: 110 KSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVV 169
Query: 260 AWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARM 319
W+ +I + G+ L F M + +++ +++ + S G +AL+ F M
Sbjct: 170 VWNLMIRGFCDSGDVERGLHLFKQMSERSI----VSWNSMISSLSKCGRDREALELFCEM 225
Query: 320 QQDYGLQP 327
D G P
Sbjct: 226 -IDQGFDP 232
>AT5G40410.1 | Symbols: | INVOLVED IN: biological_process unknown;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT1G08070.1); Has 12213 Blast hits to 4641
proteins in 127 species: Archae - 0; Bacteria - 0;
Metazoa - 61; Fungi - 12; Plants - 12006; Viruses - 0;
Other Eukaryotes - 134 (source: NCBI BLink). |
chr5:16171385-16173211 FORWARD
Length = 608
Score = 218 bits (556), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 126/416 (30%), Positives = 213/416 (51%), Gaps = 36/416 (8%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLV--LKSCSAIHRSQLGAA 79
L+SW ++ + +G+ + V + + S + P ++ + + +C + G
Sbjct: 97 LVSWNSLISGYSGRGYLGKCFEVLSRMMIS-EVGFRPNEVTFLSMISACVYGGSKEEGRC 155
Query: 80 IHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNC 139
IH +K G L V A ++ YGK S+ KLF+++ +N+V WN MI ++ +
Sbjct: 156 IHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQN-- 213
Query: 140 VSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALL 199
GLA K +A++ R + +P+ T LA+L
Sbjct: 214 -------------------------GLA------EKGLAYFNMSRRVGHEPDQATFLAVL 242
Query: 200 RACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVV 259
R+C M + + + IHG + + + + L++ Y + G L ++S VF+ + D +
Sbjct: 243 RSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSM 302
Query: 260 AWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARM 319
AW+++++AYA HG R A++ F M + PD +TF +L ACSH+GL ++ YF M
Sbjct: 303 AWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETM 362
Query: 320 QQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVEL 379
+ Y + P DHYSC+VD+L R+G L +AY +I+ MP++ + WGALLGACR Y + +L
Sbjct: 363 SKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQL 422
Query: 380 AEIAGRALFEIEPDNPANYVLLARIYASMGRHGEAXXXXXXXXXXGVKVAPGGSWV 435
A LFE+EP + NYV+L+ IY++ G +A G+ A G S++
Sbjct: 423 GTKAAERLFELEPRDGRNYVMLSNIYSASGLWKDASRIRNLMKQKGLVRASGCSYI 478
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 153/331 (46%), Gaps = 42/331 (12%)
Query: 49 QTSLALSLDPYVLSLV--LKSCSAIHRSQL--GAAIHSHSIKMGFLSNPFVACALVDMYG 104
Q+S SLD V SL+ +KSC +I +L + S S + GF+ + V C L +
Sbjct: 23 QSSFVHSLDANVSSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHD 82
Query: 105 KCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIA 164
C A KLFDE+P+R++V WN++IS Y+ + + M ++
Sbjct: 83 VC-----AEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMIS----------- 126
Query: 165 GLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHID 224
E+ +PN +T L+++ ACV S + IHG ++ +
Sbjct: 127 --------------------EVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVL 166
Query: 225 PHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHM 284
++ + + YG+ G L ++ +F ++ +++V+W+++I + +G A L F+
Sbjct: 167 EEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMS 226
Query: 285 EMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGR 344
PD TFLAVL++C G+ A + G + + L+D+ S+ GR
Sbjct: 227 RRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFG-GFSGNKCITTALLDLYSKLGR 285
Query: 345 LYEAYDIIRGMPVKVTVKAWGALLGACRTYG 375
L ++ + + ++ AW A+L A T+G
Sbjct: 286 LEDSSTVFHEITSPDSM-AWTAMLAAYATHG 315
>AT1G53600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:20001263-20005795 FORWARD
Length = 839
Score = 218 bits (556), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 121/444 (27%), Positives = 227/444 (51%), Gaps = 31/444 (6%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
+I+WT ++ + K GF + +F ++ + ++ L+++ K+C R + G+ IH
Sbjct: 239 VITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIH 298
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVS 141
+M + F+ +L+ MY K A+ +F + ++ V WN++I+ +S
Sbjct: 299 GLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQIS 358
Query: 142 DALYMFDAMHVAPDASTFNAIIAGLAGTEDGSA--------------------------- 174
+A +F+ M D ++ +I G +G + S
Sbjct: 359 EAYELFEKMP-GKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNG 417
Query: 175 ---KAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRS 231
+A+ ++ +M + + PN T ++L A + L +IHG ++ +I +++
Sbjct: 418 YYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQN 477
Query: 232 GLVEAYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLP 291
LV Y +CG +A +F + E ++V+++++IS Y+ +G + AL+ F +E + P
Sbjct: 478 SLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEP 537
Query: 292 DDITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDI 351
+ +TFLA+L AC H G D YF M+ Y ++P DHY+C+VD+L R+G L +A ++
Sbjct: 538 NGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGRSGLLDDASNL 597
Query: 352 IRGMPVKVTVKAWGALLGACRTYGEVELAEIAGRALFEIEPDNPANYVLLARIYASMGRH 411
I MP K WG+LL A +T+ V+LAE+A + L E+EPD+ YV+L+++Y+ +G++
Sbjct: 598 ISTMPCKPHSGVWGSLLSASKTHLRVDLAELAAKKLIELEPDSATPYVVLSQLYSIIGKN 657
Query: 412 GEAXXXXXXXXXXGVKVAPGGSWV 435
+ +K PG SW+
Sbjct: 658 RDCDRIMNIKKSKRIKKDPGSSWI 681
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 118/303 (38%), Gaps = 64/303 (21%)
Query: 88 GFLSNPFVACA-LVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSDALYM 146
G V+C+ +V Y K AR LFD + +RNV+ W AMI Y + D +
Sbjct: 202 GMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGL 261
Query: 147 FDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMR-ELSLKPNLITLLALLRACVRM 205
F RMR E +K N TL + +AC
Sbjct: 262 F---------------------------------LRMRQEGDVKVNSNTLAVMFKACRDF 288
Query: 206 TSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWSSLI 265
+IHG R ++ L + L+ Y + G + A VF MK +D V+W+SLI
Sbjct: 289 VRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLI 348
Query: 266 SAYALHGEARSALETFHHM-------------------------EMAKVLP--DDITFLA 298
+ + A E F M E+ ++P D+IT+ A
Sbjct: 349 TGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTA 408
Query: 299 VLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVK 358
++ A G ++AL +F +M Q + P+S +S ++ + L E I G VK
Sbjct: 409 MISAFVSNGYYEEALCWFHKMLQKE-VCPNSYTFSSVLSATASLADLIEGLQ-IHGRVVK 466
Query: 359 VTV 361
+ +
Sbjct: 467 MNI 469
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 107/253 (42%), Gaps = 20/253 (7%)
Query: 112 ARKLFDEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTED 171
A +F ++ R++V W AMIS Y + +S A +FD M V S +NA+I + +
Sbjct: 69 AEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTTS-YNAMITAMIKNKC 127
Query: 172 GSAKAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHG---CSIRNHIDPHPQ 228
KA + + E N ++ ++ VR + + ++ R+ + +
Sbjct: 128 DLGKAYELFCDIPE----KNAVSYATMITGFVRAGRFDEAEFLYAETPVKFRDSVASNV- 182
Query: 229 LRSGLVEAYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAK 288
L+ Y R G A VF M ++VV+ SS++ Y G A F M
Sbjct: 183 ----LLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERN 238
Query: 289 VLPDDITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEA 348
V IT+ A++ AG +D F RM+Q+ ++ +S+ + + R E
Sbjct: 239 V----ITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREG 294
Query: 349 YDI---IRGMPVK 358
I + MP++
Sbjct: 295 SQIHGLVSRMPLE 307
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 69/319 (21%), Positives = 122/319 (38%), Gaps = 55/319 (17%)
Query: 98 ALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDAS 157
A++ Y + A ++FDE+P R +NAMI+ + C Y +A
Sbjct: 86 AMISAYAENGKMSKAWQVFDEMPVRVTTSYNAMITAMIKNKCDLGKAYELFCDIPEKNAV 145
Query: 158 TFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNL---ITLLALLRA-----CVRMTSLN 209
++ +I G G F + + + ++ + L LRA VR+
Sbjct: 146 SYATMITGF--VRAGRFDEAEFLYAETPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGM 203
Query: 210 MIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWSSLISAYA 269
+KE+ C S +V Y + G +++A ++F M ER+V+ W+++I Y
Sbjct: 204 AVKEVVSC-------------SSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYF 250
Query: 270 LHGEARSALETFHHMEMAKVLPDDITFLAVL-KAC----------------SHAGLADD- 311
G F M + + LAV+ KAC S L D
Sbjct: 251 KAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDL 310
Query: 312 -----------ALDYFARMQQDYGLQPSSD--HYSCLVDVLSRAGRLYEAYDIIRGMPVK 358
L Y + +G+ + D ++ L+ L + ++ EAY++ MP K
Sbjct: 311 FLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGK 370
Query: 359 VTVKAWGALLGACRTYGEV 377
V +W ++ GE+
Sbjct: 371 DMV-SWTDMIKGFSGKGEI 388
>AT2G37320.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15667223-15668725 FORWARD
Length = 500
Score = 218 bits (555), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 129/382 (33%), Positives = 193/382 (50%), Gaps = 35/382 (9%)
Query: 55 SLDPYVLSLVLKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARK 114
S D Y LS ++SC + G+ H ++K GF+S+ ++ +LV +Y +A K
Sbjct: 117 SFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYK 176
Query: 115 LFDEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSA 174
+F+E+P+RNVV W AMIS + V L +
Sbjct: 177 VFEEMPERNVVSWTAMISGFAQEWRVDICLKL---------------------------- 208
Query: 175 KAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLV 234
Y +MR+ + PN T ALL AC +L + +H ++ + + + + L+
Sbjct: 209 -----YSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLI 263
Query: 235 EAYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFH-HMEMAKVLPDD 293
Y +CG L +A +F +DVV+W+S+I+ YA HG A A+E F M + PD
Sbjct: 264 SMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDA 323
Query: 294 ITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIR 353
IT+L VL +C HAGL + +F M + +GL+P +HYSCLVD+L R G L EA ++I
Sbjct: 324 ITYLGVLSSCRHAGLVKEGRKFFNLMAE-HGLKPELNHYSCLVDLLGRFGLLQEALELIE 382
Query: 354 GMPVKVTVKAWGALLGACRTYGEVELAEIAGRALFEIEPDNPANYVLLARIYASMGRHGE 413
MP+K WG+LL +CR +G+V A +EPD A +V LA +YAS+G E
Sbjct: 383 NMPMKPNSVIWGSLLFSCRVHGDVWTGIRAAEERLMLEPDCAATHVQLANLYASVGYWKE 442
Query: 414 AXXXXXXXXXXGVKVAPGGSWV 435
A G+K PG SW+
Sbjct: 443 AATVRKLMKDKGLKTNPGCSWI 464
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 112/260 (43%), Gaps = 38/260 (14%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDP--YVLSLVLKSCSAIHRSQLGAA 79
++SWT ++ ++ L +++ ++ S + DP Y + +L +C+ G +
Sbjct: 186 VVSWTAMISGFAQEWRVDICLKLYSKMRKSTS---DPNDYTFTALLSACTGSGALGQGRS 242
Query: 80 IHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNC 139
+H ++ MG S ++ +L+ MY KC A ++FD+ ++VV WN+MI+ Y
Sbjct: 243 VHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGL 302
Query: 140 VSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALL 199
A+ +F+ M P + T KP+ IT L +L
Sbjct: 303 AMQAIELFELM--MPKSGT------------------------------KPDAITYLGVL 330
Query: 200 RACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKER-DV 258
+C + ++ + + P S LV+ GR G L A + NM + +
Sbjct: 331 SSCRHAGLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNS 390
Query: 259 VAWSSLISAYALHGEARSAL 278
V W SL+ + +HG+ + +
Sbjct: 391 VIWGSLLFSCRVHGDVWTGI 410
>AT2G27610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:11783927-11786533 REVERSE
Length = 868
Score = 218 bits (554), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 127/434 (29%), Positives = 214/434 (49%), Gaps = 39/434 (8%)
Query: 3 CEAKLNQLRIMSYSSNYLRLISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLS 62
C A L+ LR+ ++SWT ++ ++ ++A+ +F+ ++ + + + S
Sbjct: 343 CTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRK-GVRPNEFTYS 401
Query: 63 LVLKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQR 122
++L + I S+ +H+ +K + + V AL+D Y K A K+F I +
Sbjct: 402 VILTALPVISPSE----VHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDK 457
Query: 123 NVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWR 182
++V W+AM+ AG A T + A AI +
Sbjct: 458 DIVAWSAML--------------------------------AGYAQTGETEA-AIKMFGE 484
Query: 183 MRELSLKPNLITLLALLRACVRMT-SLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCG 241
+ + +KPN T ++L C S+ K+ HG +I++ +D + S L+ Y + G
Sbjct: 485 LTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKG 544
Query: 242 CLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLK 301
+ +A VF +E+D+V+W+S+IS YA HG+A AL+ F M+ KV D +TF+ V
Sbjct: 545 NIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFA 604
Query: 302 ACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTV 361
AC+HAGL ++ YF M +D + P+ +H SC+VD+ SRAG+L +A +I MP
Sbjct: 605 ACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGS 664
Query: 362 KAWGALLGACRTYGEVELAEIAGRALFEIEPDNPANYVLLARIYASMGRHGEAXXXXXXX 421
W +L ACR + + EL +A + ++P++ A YVLL+ +YA G E
Sbjct: 665 TIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLM 724
Query: 422 XXXGVKVAPGGSWV 435
VK PG SW+
Sbjct: 725 NERNVKKEPGYSWI 738
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 120/272 (44%), Gaps = 34/272 (12%)
Query: 34 KQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIHSHSIKMGFLSNP 93
+ G Q+A +F +I L + +D + S VLK + + G +H IK GFL +
Sbjct: 70 RDGRTQEAKRLFLNIH-RLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDV 128
Query: 94 FVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMHVA 153
V +LVD Y K + RK+FDE+ +RNVV W +IS Y ++ + L +F
Sbjct: 129 SVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLF------ 182
Query: 154 PDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKE 213
RM+ +PN T A L +
Sbjct: 183 ---------------------------MRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQ 215
Query: 214 IHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGE 273
+H ++N +D + + L+ Y +CG + A +F + + VV W+S+IS YA +G
Sbjct: 216 VHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGL 275
Query: 274 ARSALETFHHMEMAKVLPDDITFLAVLKACSH 305
AL F+ M + V + +F +V+K C++
Sbjct: 276 DLEALGMFYSMRLNYVRLSESSFASVIKLCAN 307
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 78/374 (20%), Positives = 166/374 (44%), Gaps = 42/374 (11%)
Query: 5 AKLNQLRIMSYSSNYLRLISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLV 64
+ + RI+ + +++W ++ + G +AL +F ++ + + L + V
Sbjct: 243 GNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNY-VRLSESSFASV 301
Query: 65 LKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNV 124
+K C+ + + +H +K GFL + + AL+ Y KC + A +LF EI
Sbjct: 302 IKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEI----- 356
Query: 125 VVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMR 184
CV + + ++ A+I+G DG +A+ + M+
Sbjct: 357 -------------GCVGNVV-------------SWTAMISGFL-QNDGKEEAVDLFSEMK 389
Query: 185 ELSLKPNLITLLALLRACVRMTSLNMIK--EIHGCSIRNHIDPHPQLRSGLVEAYGRCGC 242
++PN T +L T+L +I E+H ++ + + + + L++AY + G
Sbjct: 390 RKGVRPNEFTYSVIL------TALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGK 443
Query: 243 LINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKA 302
+ A+ VF + ++D+VAWS++++ YA GE +A++ F + + P++ TF ++L
Sbjct: 444 VEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNV 503
Query: 303 CSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVK 362
C+ + F L S S L+ + ++ G + A ++ + K V
Sbjct: 504 CAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLV- 562
Query: 363 AWGALLGACRTYGE 376
+W +++ +G+
Sbjct: 563 SWNSMISGYAQHGQ 576
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/360 (21%), Positives = 160/360 (44%), Gaps = 41/360 (11%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
+++WT ++ + + + + L +F +Q + + + L + G +H
Sbjct: 159 VVTWTTLISGYARNSMNDEVLTLFMRMQNE-GTQPNSFTFAAALGVLAEEGVGGRGLQVH 217
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVS 141
+ +K G V+ +L+++Y KC + AR LFD+ ++VV WN+MIS Y +
Sbjct: 218 TVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDL 277
Query: 142 DALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRA 201
+AL MF +M + Y R+ E S ++++
Sbjct: 278 EALGMFYSMRLN--------------------------YVRLSESSFA-------SVIKL 304
Query: 202 CVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMK-ERDVVA 260
C + L +++H ++ +R+ L+ AY +C +++A +F + +VV+
Sbjct: 305 CANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVS 364
Query: 261 WSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQ 320
W+++IS + + A++ F M+ V P++ T+ +L A + + + ++
Sbjct: 365 WTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALP---VISPSEVHAQVVK 421
Query: 321 QDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVELA 380
+Y + SS + L+D + G++ EA + G+ K V AW A+L GE E A
Sbjct: 422 TNY--ERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIV-AWSAMLAGYAQTGETEAA 478
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 105/245 (42%), Gaps = 10/245 (4%)
Query: 129 AMISLYTHSNCVSDALY----MFDAMHVAPDASTFNAIIAGLAGTEDG-SAKAIAFYWRM 183
A + +Y S LY +FD D ++ +++ G + DG + +A + +
Sbjct: 28 AQVRIYCFGTVSSSRLYNAHNLFDK-SPGRDRESYISLLFGF--SRDGRTQEAKRLFLNI 84
Query: 184 RELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCL 243
L ++ + ++L+ + +++H I+ + + LV+ Y +
Sbjct: 85 HRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNF 144
Query: 244 INASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKAC 303
+ VF MKER+VV W++LIS YA + L F M+ P+ TF A L
Sbjct: 145 KDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVL 204
Query: 304 SHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKA 363
+ G+ L + ++ GL + + L+++ + G + +A + VK +V
Sbjct: 205 AEEGVGGRGLQVHTVVVKN-GLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVK-SVVT 262
Query: 364 WGALL 368
W +++
Sbjct: 263 WNSMI 267
>AT4G14170.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:8176709-8178085 REVERSE
Length = 458
Score = 217 bits (552), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 139/433 (32%), Positives = 206/433 (47%), Gaps = 38/433 (8%)
Query: 5 AKLNQLRIMSYS----SNYLRLISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYV 60
+KLN L S S Y + SW + + GF +++ +F + + D +
Sbjct: 58 SKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFT 117
Query: 61 LSLVLKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIP 120
L L+L++CSA ++ G IH +K+GF S+ FV+ ALV MY ARKLFD++P
Sbjct: 118 LPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMP 177
Query: 121 QRNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFY 180
R+ V++ AM Y L MF M G +G S
Sbjct: 178 VRDSVLYTAMFGGYVQQGEAMLGLAMFREM--------------GYSGFALDS------- 216
Query: 181 WRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRC 240
+ +++LL AC ++ +L K +HG IR L + + + Y +C
Sbjct: 217 ------------VVMVSLLMACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKC 264
Query: 241 GCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVL 300
L A VF NM RDV++WSSLI Y L G+ + + F M + P+ +TFL VL
Sbjct: 265 SILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVL 324
Query: 301 KACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVT 360
AC+H GL + + YF R+ Q+Y + P HY+ + D +SRAG L EA + MPVK
Sbjct: 325 SACAHGGLVEKSWLYF-RLMQEYNIVPELKHYASVADCMSRAGLLEEAEKFLEDMPVKPD 383
Query: 361 VKAWGALLGACRTYGEVELAEIAGRALFEIEPDNPANYVLLARIYASMGRHGEAXXXXXX 420
GA+L C+ YG VE+ E R L +++P + YV LA +Y++ GR EA
Sbjct: 384 EAVMGAVLSGCKVYGNVEVGERVARELIQLKPRKASYYVTLAGLYSAAGRFDEAESLRQW 443
Query: 421 XXXXGVKVAPGGS 433
+ PG S
Sbjct: 444 MKEKQISKVPGCS 456
>AT5G48910.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:19832969-19834909 REVERSE
Length = 646
Score = 217 bits (552), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 130/410 (31%), Positives = 211/410 (51%), Gaps = 18/410 (4%)
Query: 41 ALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALV 100
A+ +F + + + + + VLK+C+ + Q G IH ++K GF + FV LV
Sbjct: 111 AITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLV 170
Query: 101 DMYGKCVSTFSARKLF-DEIPQRNVVV-------------WNAMISLYTHSNCVSDALYM 146
MY C AR LF I ++++VV WN MI Y A +
Sbjct: 171 RMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARML 230
Query: 147 FDAMHVAPDASTFNAIIAGLAGTEDGSAK-AIAFYWRMRELSLKPNLITLLALLRACVRM 205
FD M ++N +I+G + +G K A+ + M++ ++PN +TL+++L A R+
Sbjct: 231 FDKMR-QRSVVSWNTMISGY--SLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRL 287
Query: 206 TSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWSSLI 265
SL + + +H + + I L S L++ Y +CG + A +VF + +V+ WS++I
Sbjct: 288 GSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMI 347
Query: 266 SAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQDYGL 325
+ +A+HG+A A++ F M A V P D+ ++ +L ACSH GL ++ YF++M GL
Sbjct: 348 NGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGL 407
Query: 326 QPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVELAEIAGR 385
+P +HY C+VD+L R+G L EA + I MP+K W ALLGACR G VE+ +
Sbjct: 408 EPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVAN 467
Query: 386 ALFEIEPDNPANYVLLARIYASMGRHGEAXXXXXXXXXXGVKVAPGGSWV 435
L ++ P + YV L+ +YAS G E ++ PG S +
Sbjct: 468 ILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGCSLI 517
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/351 (22%), Positives = 147/351 (41%), Gaps = 87/351 (24%)
Query: 78 AAIHSHSIKMGFLSNPFVA------CALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMI 131
+ IH+ IK G + + A CA D++ + + A K+F+++PQRN WN +I
Sbjct: 40 SQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDY--AHKIFNQMPQRNCFSWNTII 97
Query: 132 SLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIA-FYWRMRELSLKP 190
++ S+ ED + AI FY M + ++P
Sbjct: 98 RGFSESD-------------------------------EDKALIAITLFYEMMSDEFVEP 126
Query: 191 NLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVF 250
N T ++L+AC + + K+IHG +++ + S LV Y CG + +A +F
Sbjct: 127 NRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLF 186
Query: 251 Y---------------------------------------------NMKERDVVAWSSLI 265
Y M++R VV+W+++I
Sbjct: 187 YKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMI 246
Query: 266 SAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQDYGL 325
S Y+L+G + A+E F M+ + P+ +T ++VL A S G + ++ +D G+
Sbjct: 247 SGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELG-EWLHLYAEDSGI 305
Query: 326 QPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGE 376
+ S L+D+ S+ G + +A + +P + V W A++ +G+
Sbjct: 306 RIDDVLGSALIDMYSKCGIIEKAIHVFERLP-RENVITWSAMINGFAIHGQ 355
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 110/255 (43%), Gaps = 40/255 (15%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSL--VLKSCSAIHRSQLGAA 79
++SW ++ + GF + A+ VF ++ + P ++L VL + S + +LG
Sbjct: 239 VVSWNTMISGYSLNGFFKDAVEVFREMKKG---DIRPNYVTLVSVLPAISRLGSLELGEW 295
Query: 80 IHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNC 139
+H ++ G + + AL+DMY KC A +F+ +P+ NV+ W+AMI+ +
Sbjct: 296 LHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFA---- 351
Query: 140 VSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALL 199
I G AG AI + +MR+ ++P+ + + LL
Sbjct: 352 -----------------------IHGQAGD------AIDCFCKMRQAGVRPSDVAYINLL 382
Query: 200 RACVRMTSLNMIKEIHGCSIR-NHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKER-D 257
AC + + + + ++P + +V+ GR G L A NM + D
Sbjct: 383 TACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPD 442
Query: 258 VVAWSSLISAYALHG 272
V W +L+ A + G
Sbjct: 443 DVIWKALLGACRMQG 457
>AT4G14850.1 | Symbols: LOI1 | LOI1 (lovastatin insensitive 1) |
chr4:8513947-8516275 FORWARD
Length = 684
Score = 216 bits (549), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 128/443 (28%), Positives = 221/443 (49%), Gaps = 45/443 (10%)
Query: 1 MFCEAKL-NQLRIMSYSSNYLRLISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPY 59
M+C+ +L + R + L +W +++ V G ++A+ F + +D +
Sbjct: 152 MYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFR-----RIDGH 206
Query: 60 VLSLV----LKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKL 115
S+ L +CS LG +H ++ GF ++ V L+D YGKC S+ +
Sbjct: 207 PNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEII 266
Query: 116 FDEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAK 175
F E+ +N V W ++++ Y ++ ED K
Sbjct: 267 FTEMGTKNAVSWCSLVAAYVQNH-------------------------------ED--EK 293
Query: 176 AIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVE 235
A Y R R+ ++ + + ++L AC M L + + IH +++ ++ + S LV+
Sbjct: 294 ASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVD 353
Query: 236 AYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHM--EMAKVLPDD 293
YG+CGC+ ++ F M E+++V +SLI YA G+ AL F M P+
Sbjct: 354 MYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNY 413
Query: 294 ITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIR 353
+TF+++L ACS AG ++ + F M+ YG++P ++HYSC+VD+L RAG + AY+ I+
Sbjct: 414 MTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIK 473
Query: 354 GMPVKVTVKAWGALLGACRTYGEVELAEIAGRALFEIEPDNPANYVLLARIYASMGRHGE 413
MP++ T+ WGAL ACR +G+ +L +A LF+++P + N+VLL+ +A+ GR E
Sbjct: 474 KMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAE 533
Query: 414 AXXXXXXXXXXGVKVAPGGSWVT 436
A G+K G SW+T
Sbjct: 534 ANTVREELKGVGIKKGAGYSWIT 556
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 107/399 (26%), Positives = 174/399 (43%), Gaps = 52/399 (13%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
++SWT ++ + G ALV F ++ + D + K+ +++ G IH
Sbjct: 73 VVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPND-FTFPCAFKAVASLRLPVTGKQIH 131
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVS 141
+ ++K G + + FV C+ DMY K ARKLFDEIP+RN+ WNA IS N V+
Sbjct: 132 ALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFIS-----NSVT 186
Query: 142 DALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRA 201
D +AI + R + PN IT A L A
Sbjct: 187 DGR----------------------------PREAIEAFIEFRRIDGHPNSITFCAFLNA 218
Query: 202 CVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAW 261
C LN+ ++HG +R+ D + +GL++ YG+C + ++ +F M ++ V+W
Sbjct: 219 CSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSW 278
Query: 262 SSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQ 321
SL++AY + E A + V D +VL AC AG+A L R
Sbjct: 279 CSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSAC--AGMAGLEL---GRSIH 333
Query: 322 DYGLQPSSDHY----SCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEV 377
+ ++ + S LVD+ + G + ++ MP K V +L+G G+V
Sbjct: 334 AHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTR-NSLIGGYAHQGQV 392
Query: 378 ELAEIAGRALF-EIEPDN---PANYVLLARIYASMGRHG 412
++A ALF E+ P NY+ + ++ R G
Sbjct: 393 DMA----LALFEEMAPRGCGPTPNYMTFVSLLSACSRAG 427
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 96/245 (39%), Gaps = 34/245 (13%)
Query: 61 LSLVLKSCSAIHRSQLGAAIHSHSIK-MGFLSNPFVACALVDMYGKCVSTFSARKLFDEI 119
L L+LK+ + +LG +H+ +K + PF+A L++MY K SAR +
Sbjct: 9 LGLLLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLT 68
Query: 120 PQRNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAF 179
P RNVV W ++IS + S AL F
Sbjct: 69 PARNVVSWTSLISGLAQNGHFSTALVEF-------------------------------- 96
Query: 180 YWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGR 239
+ MR + PN T +A + K+IH +++ + + Y +
Sbjct: 97 -FEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCK 155
Query: 240 CGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAV 299
+A +F + ER++ W++ IS G R A+E F P+ ITF A
Sbjct: 156 TRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAF 215
Query: 300 LKACS 304
L ACS
Sbjct: 216 LNACS 220
>AT3G24000.1 | Symbols: | INVOLVED IN: biological_process unknown;
EXPRESSED IN: shoot apex, carpel; EXPRESSED DURING:
petal differentiation and expansion stage; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT3G23330.1); Has 15874 Blast hits to 5333
proteins in 187 species: Archae - 1; Bacteria - 6;
Metazoa - 100; Fungi - 81; Plants - 15349; Viruses - 0;
Other Eukaryotes - 337 (source: NCBI BLink). |
chr3:8672774-8674881 FORWARD
Length = 665
Score = 216 bits (549), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 135/414 (32%), Positives = 205/414 (49%), Gaps = 35/414 (8%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
++WT ++ + + AL+ FN + S + + LS V+K+ +A R G +H
Sbjct: 126 FVTWTTLISGYSQHDRPCDALLFFNQM-LRFGYSPNEFTLSSVIKAAAAERRGCCGHQLH 184
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVS 141
+K GF SN V AL+D LYT +
Sbjct: 185 GFCVKCGFDSNVHVGSALLD-------------------------------LYTRYGLMD 213
Query: 142 DALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRA 201
DA +FDA+ D S +NA+IAG A G+ KA+ + M +P+ + +L A
Sbjct: 214 DAQLVFDALESRNDVS-WNALIAGHA-RRSGTEKALELFQGMLRDGFRPSHFSYASLFGA 271
Query: 202 CVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAW 261
C L K +H I++ + L++ Y + G + +A +F + +RDVV+W
Sbjct: 272 CSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSW 331
Query: 262 SSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQ 321
+SL++AYA HG + A+ F M + P++I+FL+VL ACSH+GL D+ Y+ M++
Sbjct: 332 NSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKK 391
Query: 322 DYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVELAE 381
D G+ P + HY +VD+L RAG L A I MP++ T W ALL ACR + EL
Sbjct: 392 D-GIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGA 450
Query: 382 IAGRALFEIEPDNPANYVLLARIYASMGRHGEAXXXXXXXXXXGVKVAPGGSWV 435
A +FE++PD+P +V+L IYAS GR +A GVK P SWV
Sbjct: 451 YAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWV 504
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 142/319 (44%), Gaps = 35/319 (10%)
Query: 57 DPYVLSLVLKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLF 116
D + +LK C+ G +H+H ++ F + + L++MY KC S ARK+F
Sbjct: 59 DRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVF 118
Query: 117 DEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKA 176
+++PQR+ V W +IS Y+ + DAL F+
Sbjct: 119 EKMPQRDFVTWTTLISGYSQHDRPCDALLFFN---------------------------- 150
Query: 177 IAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEA 236
+M PN TL ++++A ++HG ++ D + + S L++
Sbjct: 151 -----QMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDL 205
Query: 237 YGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITF 296
Y R G + +A VF ++ R+ V+W++LI+ +A ALE F M P ++
Sbjct: 206 YTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSY 265
Query: 297 LAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMP 356
++ ACS G + A M + G + + + L+D+ +++G +++A I +
Sbjct: 266 ASLFGACSSTGFLEQGKWVHAYMIKS-GEKLVAFAGNTLLDMYAKSGSIHDARKIFDRL- 323
Query: 357 VKVTVKAWGALLGACRTYG 375
K V +W +LL A +G
Sbjct: 324 AKRDVVSWNSLLTAYAQHG 342
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 83/189 (43%), Gaps = 7/189 (3%)
Query: 197 ALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKER 256
LL+ C L + +H +++ + + L+ Y +CG L A VF M +R
Sbjct: 65 TLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQR 124
Query: 257 DVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACS--HAGLADDALD 314
D V W++LIS Y+ H AL F+ M P++ T +V+KA + G L
Sbjct: 125 DFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLH 184
Query: 315 YFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALL-GACRT 373
F G + S L+D+ +R G + +A + + + V +W AL+ G R
Sbjct: 185 GFC---VKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDV-SWNALIAGHARR 240
Query: 374 YGEVELAEI 382
G + E+
Sbjct: 241 SGTEKALEL 249
>AT3G14730.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4949385-4951346 REVERSE
Length = 653
Score = 216 bits (549), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 122/415 (29%), Positives = 217/415 (52%), Gaps = 38/415 (9%)
Query: 25 WTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIHSHS 84
W +N + + + AL+VF+ ++ + + + ++ VL + + G +IH +
Sbjct: 230 WNALVNGYSQIFRFEDALLVFSKMREE-GVGVSRHTITSVLSAFTVSGDIDNGRSIHGLA 288
Query: 85 IKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSDAL 144
+K G S+ V+ AL+DMYGK A +F+ + +R++ WN+++ CV D
Sbjct: 289 VKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVL-------CVHD-- 339
Query: 145 YMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRACVR 204
G DG+ +A + RM ++P+++TL +L C R
Sbjct: 340 ---------------------YCGDHDGT---LALFERMLCSGIRPDIVTLTTVLPTCGR 375
Query: 205 MTSLNMIKEIHG----CSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVA 260
+ SL +EIHG + N + + + L++ Y +CG L +A VF +M+ +D +
Sbjct: 376 LASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSAS 435
Query: 261 WSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQ 320
W+ +I+ Y + AL+ F M A V PD+ITF+ +L+ACSH+G ++ ++ A+M+
Sbjct: 436 WNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQME 495
Query: 321 QDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVELA 380
Y + P+SDHY+C++D+L RA +L EAY++ P+ W ++L +CR +G +LA
Sbjct: 496 TVYNILPTSDHYACVIDMLGRADKLEEAYELAISKPICDNPVVWRSILSSCRLHGNKDLA 555
Query: 381 EIAGRALFEIEPDNPANYVLLARIYASMGRHGEAXXXXXXXXXXGVKVAPGGSWV 435
+AG+ L E+EP++ YVL++ +Y G++ E VK PG SW+
Sbjct: 556 LVAGKRLHELEPEHCGGYVLMSNVYVEAGKYEEVLDVRDAMRQQNVKKTPGCSWI 610
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/399 (21%), Positives = 170/399 (42%), Gaps = 42/399 (10%)
Query: 1 MFCEAKLNQLRIMSYSSNYLRLISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYV 60
M+ + L + ++ + + + + ++ V G A+ + ++ + L D Y
Sbjct: 105 MYAKCGLMRRAVLVFGGSERDVFGYNALISGFVVNGSPLDAMETYREMRANGILP-DKYT 163
Query: 61 LSLVLKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIP 120
+LK A+ S + +H + K+GF S+ +V LV Y K +S A+K+FDE+P
Sbjct: 164 FPSLLKGSDAMELSDV-KKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELP 222
Query: 121 QRN-VVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAF 179
R+ V+WNA+++ Y+ DAL +F
Sbjct: 223 DRDDSVLWNALVNGYSQIFRFEDALLVFS------------------------------- 251
Query: 180 YWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGR 239
+MRE + + T+ ++L A ++ + IHG +++ + + L++ YG+
Sbjct: 252 --KMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGK 309
Query: 240 CGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAV 299
L A+++F M ERD+ W+S++ + G+ L F M + + PD +T V
Sbjct: 310 SKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTV 369
Query: 300 LKACSHAGLADDALDYFARMQQDYGLQPSSDH---YSCLVDVLSRAGRLYEAYDIIRGMP 356
L C + M L S + ++ L+D+ + G L +A + M
Sbjct: 370 LPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMR 429
Query: 357 VKVTVKAWGALLG--ACRTYGEVELAEIAGRALFEIEPD 393
VK + +W ++ ++ GE+ L + ++PD
Sbjct: 430 VKDSA-SWNIMINGYGVQSCGELALDMFSCMCRAGVKPD 467
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 89/187 (47%), Gaps = 16/187 (8%)
Query: 191 NLITLLALLRACVRMTSLNMIKEIHGCSIRN-HIDPHPQLRSGLVEAYGRCGCLINASNV 249
N+ T +A L+ C + ++IHG +R +D P+ + LV Y +CG + A V
Sbjct: 59 NVATCIATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLV 118
Query: 250 FYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLA 309
F ERDV +++LIS + ++G A+ET+ M +LPD TF ++LK L+
Sbjct: 119 F-GGSERDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMELS 177
Query: 310 DDALDYFARMQQDYGLQ----PSSDHY--SCLVDVLSRAGRLYEAYDIIRGMPVKVTVKA 363
D +++ +GL SD Y S LV S+ + +A + +P +
Sbjct: 178 D--------VKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVL 229
Query: 364 WGALLGA 370
W AL+
Sbjct: 230 WNALVNG 236
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 109/273 (39%), Gaps = 43/273 (15%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
L +W L H G H L +F + S + D L+ VL +C + + G IH
Sbjct: 328 LFTWNSVLCVHDYCGDHDGTLALFERMLCS-GIRPDIVTLTTVLPTCGRLASLRQGREIH 386
Query: 82 SHSIKMGFL----SNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHS 137
+ I G L SN F+ +L+DMY KC AR +FD + ++ WN MI+ Y
Sbjct: 387 GYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQ 446
Query: 138 NCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLA 197
+C AL MF M A +KP+ IT +
Sbjct: 447 SCGELALDMFSCMCRA---------------------------------GVKPDEITFVG 473
Query: 198 LLRACVRMTSLNMIKE-IHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKER 256
LL+AC LN + + +I P + +++ GR L A + +
Sbjct: 474 LLQACSHSGFLNEGRNFLAQMETVYNILPTSDHYACVIDMLGRADKLEEAYELAISKPIC 533
Query: 257 D-VVAWSSLISAYALHGEARSAL---ETFHHME 285
D V W S++S+ LHG AL + H +E
Sbjct: 534 DNPVVWRSILSSCRLHGNKDLALVAGKRLHELE 566
>AT4G14050.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:8103645-8105483 REVERSE
Length = 612
Score = 215 bits (548), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 130/414 (31%), Positives = 213/414 (51%), Gaps = 2/414 (0%)
Query: 23 ISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIHS 82
I+W L + + + L VF+ + +S L D +V S ++K+C+ + G +H
Sbjct: 70 IAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHC 129
Query: 83 HSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSD 142
H I + ++ V +LVDMY KC SA+ +FD I +N + W AM+S Y S +
Sbjct: 130 HFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEE 189
Query: 143 ALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRAC 202
AL +F + V + ++ A+I+G + G F RE + + L +++ AC
Sbjct: 190 ALELFRILPVK-NLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGAC 248
Query: 203 VRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWS 262
+ + +++HG I D + + L++ Y +C +I A ++F M+ RDVV+W+
Sbjct: 249 ANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWT 308
Query: 263 SLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQD 322
SLI A HG+A AL + M V P+++TF+ ++ ACSH G + + F M +D
Sbjct: 309 SLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKD 368
Query: 323 YGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVELA-E 381
YG++PS HY+CL+D+L R+G L EA ++I MP W ALL AC+ G ++
Sbjct: 369 YGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIR 428
Query: 382 IAGRALFEIEPDNPANYVLLARIYASMGRHGEAXXXXXXXXXXGVKVAPGGSWV 435
IA + + +P+ Y+LL+ IYAS G+ V+ PG S V
Sbjct: 429 IADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSV 482
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 133/297 (44%), Gaps = 41/297 (13%)
Query: 4 EAKLNQLRIMSYSSNYLRLISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSL 63
E L RI+ + Y SWT ++ V+ G +A VF ++ LDP VLS
Sbjct: 188 EEALELFRILPVKNLY----SWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSS 243
Query: 64 VLKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRN 123
++ +C+ + S G +H I +GF S F++ AL+DMY KC +A+ +F + R+
Sbjct: 244 IVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRD 303
Query: 124 VVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAK-AIAFYWR 182
VV W ++ I G+A + G A+ A+A Y
Sbjct: 304 VVSWTSL--------------------------------IVGMA--QHGQAEKALALYDD 329
Query: 183 MRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNH-IDPHPQLRSGLVEAYGRCG 241
M +KPN +T + L+ AC + + +E+ +++ I P Q + L++ GR G
Sbjct: 330 MVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSG 389
Query: 242 CLINASNVFYNMK-ERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFL 297
L A N+ + M D W++L+SA G + + H+ + L D T++
Sbjct: 390 LLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYI 446
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 122/260 (46%), Gaps = 40/260 (15%)
Query: 65 LKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNV 124
L+ C+ A+H+H +K+G + +A LV++YGKC + A ++FDE+P R+
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 125 VVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMR 184
+ W ++++ +N L +F ++
Sbjct: 70 IAWASVLTALNQANLSGKTLSVFSSV--------------------------------GS 97
Query: 185 ELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLI 244
L+P+ AL++AC + S++ +++H I + ++S LV+ Y +CG L
Sbjct: 98 SSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLN 157
Query: 245 NASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLP--DDITFLAVLKA 302
+A VF +++ ++ ++W++++S YA G ALE F ++LP + ++ A++
Sbjct: 158 SAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELF------RILPVKNLYSWTALISG 211
Query: 303 CSHAGLADDALDYFARMQQD 322
+G +A F M+++
Sbjct: 212 FVQSGKGLEAFSVFTEMRRE 231
>AT4G16470.1 | Symbols: | INVOLVED IN: biological_process unknown;
LOCATED IN: cellular_component unknown; EXPRESSED IN: 14
plant structures; EXPRESSED DURING: 4 anthesis, C
globular stage, petal differentiation and expansion
stage, D bilateral stage, E expanded cotyledon stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: CRR22 (CHLORORESPIRATORY REDUCTION22);
endonuclease (TAIR:AT1G11290.1); Has 12729 Blast hits to
4676 proteins in 132 species: Archae - 0; Bacteria - 0;
Metazoa - 31; Fungi - 25; Plants - 12474; Viruses - 0;
Other Eukaryotes - 199 (source: NCBI BLink). |
chr4:9287862-9289541 REVERSE
Length = 485
Score = 214 bits (546), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 178/385 (46%), Gaps = 49/385 (12%)
Query: 51 SLALSLDPYVLSLVLKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTF 110
S L ++P +++L+ C G IH+ +GF N ++ L+ +Y
Sbjct: 101 SSGLQVEPETYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYA------ 154
Query: 111 SARKLFDEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTE 170
L D IP WNAMIS Y + L++
Sbjct: 155 ----LSDLIP------WNAMISGYVQKGLEQEGLFI------------------------ 180
Query: 171 DGSAKAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLR 230
Y+ MR+ + P+ T ++ RAC + L K H I+ I + +
Sbjct: 181 ---------YYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVD 231
Query: 231 SGLVEAYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVL 290
S LV+ Y +C + VF + R+V+ W+SLIS Y HG+ L+ F M+
Sbjct: 232 SALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCR 291
Query: 291 PDDITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYD 350
P+ +TFL VL AC+H GL D ++F M++DYG++P HY+ +VD L RAGRL EAY+
Sbjct: 292 PNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYE 351
Query: 351 IIRGMPVKVTVKAWGALLGACRTYGEVELAEIAGRALFEIEPDNPANYVLLARIYASMGR 410
+ P K WG+LLGACR +G V+L E+A E++P N NYV+ A YAS G
Sbjct: 352 FVMKSPCKEHPPVWGSLLGACRIHGNVKLLELAATKFLELDPTNGGNYVVFANGYASCGL 411
Query: 411 HGEAXXXXXXXXXXGVKVAPGGSWV 435
A GVK PG S +
Sbjct: 412 REAASKVRRKMENAGVKKDPGYSQI 436
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 116/257 (45%), Gaps = 38/257 (14%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
LI W ++ +V++G Q+ L ++ ++ + + D Y + V ++CSA+ R + G H
Sbjct: 158 LIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVP-DQYTFASVFRACSALDRLEHGKRAH 216
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVS 141
+ IK SN V ALVDMY KC S ++FD++ RNV+ W ++IS Y + VS
Sbjct: 217 AVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVS 276
Query: 142 DALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRA 201
+ L F+ +M+E +PN +T L +L A
Sbjct: 277 EVLKCFE---------------------------------KMKEEGCRPNPVTFLVVLTA 303
Query: 202 CVRMTSLNMIKEIHGCSIRNH-IDPHPQLRSGLVEAYGRCGCLINASNVFYN--MKERDV 258
C ++ E R++ I+P Q + +V+ GR G L A KE
Sbjct: 304 CNHGGLVDKGWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPP 363
Query: 259 VAWSSLISAYALHGEAR 275
V W SL+ A +HG +
Sbjct: 364 V-WGSLLGACRIHGNVK 379
>AT2G33680.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:14249608-14251791 FORWARD
Length = 727
Score = 214 bits (545), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 131/433 (30%), Positives = 212/433 (48%), Gaps = 35/433 (8%)
Query: 3 CEAKLNQLRIMSYSSNYLRLISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLS 62
CE+ LN+ M SS I+W+ + + + G +A+ +F+ + S + Y +
Sbjct: 269 CES-LNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRM-FSAGIKPSEYTIV 326
Query: 63 LVLKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQR 122
VL +CS I + G +HS +K+GF + F ALVDMY K
Sbjct: 327 GVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAK----------------- 369
Query: 123 NVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWR 182
+ C++DA FD + D + + ++I+G D + +A+ Y R
Sbjct: 370 --------------AGCLADARKGFDCLQ-ERDVALWTSLISGYVQNSD-NEEALILYRR 413
Query: 183 MRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGC 242
M+ + PN T+ ++L+AC + +L + K++HG +I++ + S L Y +CG
Sbjct: 414 MKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGS 473
Query: 243 LINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKA 302
L + + VF +DVV+W+++IS + +G+ ALE F M + PDD+TF+ ++ A
Sbjct: 474 LEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISA 533
Query: 303 CSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVK 362
CSH G + YF M GL P DHY+C+VD+LSRAG+L EA + I + +
Sbjct: 534 CSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLC 593
Query: 363 AWGALLGACRTYGEVELAEIAGRALFEIEPDNPANYVLLARIYASMGRHGEAXXXXXXXX 422
W LL AC+ +G+ EL AG L + + YV L+ IY ++GR +
Sbjct: 594 LWRILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTALGRMRDVERVWKHMR 653
Query: 423 XXGVKVAPGGSWV 435
GV G SW+
Sbjct: 654 ANGVSKEVGCSWI 666
Score = 142 bits (358), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 113/400 (28%), Positives = 188/400 (47%), Gaps = 43/400 (10%)
Query: 1 MFCEAKL--NQLRIMSYSSNYLRLISWTKQLNSHVKQGFHQQALVVFN-HIQTSLALSLD 57
M+C+A L + L++ +Y +W+ ++ + +G ++A+ VFN ++ S
Sbjct: 162 MYCKAGLVEDGLKVFAYMPER-NTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDS 220
Query: 58 PYVLSLVLKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFD 117
YV + VL S +A LG IH +IK G L ++ ALV MY KC S A K+FD
Sbjct: 221 DYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFD 280
Query: 118 EIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAI 177
RN + W+AM++ Y+ + S +A+
Sbjct: 281 SSGDRNSITWSAMVTGYSQNG---------------------------------ESLEAV 307
Query: 178 AFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAY 237
+ RM +KP+ T++ +L AC + L K++H ++ + H + LV+ Y
Sbjct: 308 KLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMY 367
Query: 238 GRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFL 297
+ GCL +A F ++ERDV W+SLIS Y + + AL + M+ A ++P+D T
Sbjct: 368 AKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMA 427
Query: 298 AVLKACSH-AGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMP 356
+VLKACS A L + ++ +GL+ S L + S+ G L + + R P
Sbjct: 428 SVLKACSSLATLELGKQVHGHTIKHGFGLEVPIG--SALSTMYSKCGSLEDGNLVFRRTP 485
Query: 357 VKVTVKAWGALLGACRTYGEVELA-EIAGRALFE-IEPDN 394
K V +W A++ G+ + A E+ L E +EPD+
Sbjct: 486 NKDVV-SWNAMISGLSHNGQGDEALELFEEMLAEGMEPDD 524
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/382 (23%), Positives = 166/382 (43%), Gaps = 43/382 (11%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDP--YVLSLVLKSCSAIHRSQLGAA 79
++SW + + + G + V + A + P Y L+ + K+ S++ S +G
Sbjct: 80 VVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQ 139
Query: 80 IHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNC 139
H+ +KM + +V +LV MY K K+F +P+RN W+ M+S Y
Sbjct: 140 AHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGR 199
Query: 140 VSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALL 199
V +A+ +F+ L E+GS F A+L
Sbjct: 200 VEEAIKVFNLF---------------LREKEEGSDSDYVF----------------TAVL 228
Query: 200 RACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVV 259
+ + + ++IH +I+N + L + LV Y +C L A +F + +R+ +
Sbjct: 229 SSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSI 288
Query: 260 AWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARM 319
WS++++ Y+ +GE+ A++ F M A + P + T + VL ACS ++ + +
Sbjct: 289 TWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFL 348
Query: 320 QQDYGLQPSSDHYSCLVDVLSRAGRLYEA---YDIIRGMPVKVTVKAWGALLGACRTYGE 376
+ G + + LVD+ ++AG L +A +D ++ V + W +L+ +
Sbjct: 349 LK-LGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVAL----WTSLISGYVQNSD 403
Query: 377 VELAEIAGRALFE--IEPDNPA 396
E A I R + I P++P
Sbjct: 404 NEEALILYRRMKTAGIIPNDPT 425
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 108/244 (44%), Gaps = 25/244 (10%)
Query: 185 ELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLI 244
+ L P+ TLL L + +L + +HG IR Q + LV Y +CG L
Sbjct: 7 QTELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLA 66
Query: 245 NASNVFYNMKERDVVAWSSLISAYALHGEARSA---LETFHHMEMAKVLPDDITFLAVLK 301
A ++F + +DVV+W+SLI+ Y+ +G S+ ++ F M +LP+ T + K
Sbjct: 67 KAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFK 126
Query: 302 ACSHAGLADDALDYFARMQQDYGL----QPSSDHY--SCLVDVLSRAGRLYEAYDIIRGM 355
A+ +L +Q + L D Y + LV + +AG + + + M
Sbjct: 127 -------AESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYM 179
Query: 356 PVKVTVKAWGALLGACRTYGEVELA-EIAGRALFEIEPDNPANYV-------LLARIYAS 407
P + T W ++ T G VE A ++ L E E + ++YV L A IY
Sbjct: 180 PERNTY-TWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVG 238
Query: 408 MGRH 411
+GR
Sbjct: 239 LGRQ 242
>AT3G23330.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:8347200-8349347 FORWARD
Length = 679
Score = 214 bits (544), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 121/414 (29%), Positives = 202/414 (48%), Gaps = 34/414 (8%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
++S+ + + + G ++ AL + + T+ L D + LS VL S G IH
Sbjct: 171 VVSYNTIIAGYAQSGMYEDALRMVREMGTT-DLKPDSFTLSSVLPIFSEYVDVIKGKEIH 229
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVS 141
+ I+ G S+ ++ +LVDMY K + ++F + R+ + WN++++ Y + +
Sbjct: 230 GYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYN 289
Query: 142 DALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRA 201
+AL +F M A +KP + +++ A
Sbjct: 290 EALRLFRQMVTAK---------------------------------VKPGAVAFSSVIPA 316
Query: 202 CVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAW 261
C + +L++ K++HG +R + + S LV+ Y +CG + A +F M D V+W
Sbjct: 317 CAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSW 376
Query: 262 SSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQ 321
+++I +ALHG A+ F M+ V P+ + F+AVL ACSH GL D+A YF M +
Sbjct: 377 TAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTK 436
Query: 322 DYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVELAE 381
YGL +HY+ + D+L RAG+L EAY+ I M V+ T W LL +C + +ELAE
Sbjct: 437 VYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAE 496
Query: 382 IAGRALFEIEPDNPANYVLLARIYASMGRHGEAXXXXXXXXXXGVKVAPGGSWV 435
+F ++ +N YVL+ +YAS GR E G++ P SW+
Sbjct: 497 KVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWI 550
Score = 124 bits (312), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 97/351 (27%), Positives = 159/351 (45%), Gaps = 44/351 (12%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
+++W + Q +AL F ++ S D V VLKSC+ + + G ++H
Sbjct: 70 VLAWKSVIRCFTDQSLFSKALASFVEMRAS-GRCPDHNVFPSVLKSCTMMMDLRFGESVH 128
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVS 141
+++G + + AL++MY K + S R++F+ +P+++VV +N +I+ Y S
Sbjct: 129 GFIVRLGMDCDLYTGNALMNMYAKLLGMDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYE 188
Query: 142 DALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRA 201
DAL M M GT D LKP+ TL ++L
Sbjct: 189 DALRMVREM-----------------GTTD----------------LKPDSFTLSSVLPI 215
Query: 202 CVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAW 261
+ KEIHG IR ID + S LV+ Y + + ++ VF + RD ++W
Sbjct: 216 FSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISW 275
Query: 262 SSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQ 321
+SL++ Y +G AL F M AKV P + F +V+ AC+H A + +
Sbjct: 276 NSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHL-----ATLHLGKQLH 330
Query: 322 DYGLQP--SSDHY--SCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALL 368
Y L+ S+ + S LVD+ S+ G + A I M V V +W A++
Sbjct: 331 GYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEV-SWTAII 380
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 81/171 (47%), Gaps = 2/171 (1%)
Query: 130 MISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLK 189
+IS+YT+ + +AL +F + +P + ++I + +KA+A + MR
Sbjct: 45 VISIYTNLKLLHEALLLFKTLK-SPPVLAWKSVIRCFT-DQSLFSKALASFVEMRASGRC 102
Query: 190 PNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNV 249
P+ ++L++C M L + +HG +R +D + L+ Y + + + V
Sbjct: 103 PDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMDSVRRV 162
Query: 250 FYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVL 300
F M +DVV+++++I+ YA G AL M + PD T +VL
Sbjct: 163 FEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVL 213
>AT2G41080.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:17132857-17134554 FORWARD
Length = 565
Score = 214 bits (544), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 122/415 (29%), Positives = 196/415 (47%), Gaps = 35/415 (8%)
Query: 21 RLISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAI 80
+L +W + ++ F+++ L +F + L S D Y L V + + +G I
Sbjct: 55 KLTTWNAMIAGLIQFEFNEEGLSLFREMH-GLGFSPDEYTLGSVFSGSAGLRSVSIGQQI 113
Query: 81 HSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCV 140
H ++IK G + V +L MY + + +P RN+V WN +I + C
Sbjct: 114 HGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCP 173
Query: 141 SDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLR 200
LY++ M ++ +PN IT + +L
Sbjct: 174 ETVLYLYKMMKIS---------------------------------GCRPNKITFVTVLS 200
Query: 201 ACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVA 260
+C + ++IH +I+ + S L+ Y +CGCL +A+ F ++ D V
Sbjct: 201 SCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVM 260
Query: 261 WSSLISAYALHGEARSALETFHHM-EMAKVLPDDITFLAVLKACSHAGLADDALDYFARM 319
WSS+ISAY HG+ A+E F+ M E + +++ FL +L ACSH+GL D L+ F M
Sbjct: 261 WSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMM 320
Query: 320 QQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVEL 379
+ YG +P HY+C+VD+L RAG L +A IIR MP+K + W LL AC + E+
Sbjct: 321 VEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEM 380
Query: 380 AEIAGRALFEIEPDNPANYVLLARIYASMGRHGEAXXXXXXXXXXGVKVAPGGSW 434
A+ + + +I+P++ A YVLLA ++AS R + VK G SW
Sbjct: 381 AQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISW 435
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 108/205 (52%), Gaps = 6/205 (2%)
Query: 102 MYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDA--STF 159
MY K SA ++ + ++N + N +I+ Y + + +A +FD M PD +T+
Sbjct: 3 MYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEM---PDRKLTTW 59
Query: 160 NAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSI 219
NA+IAGL E + + ++ + M L P+ TL ++ + S+++ ++IHG +I
Sbjct: 60 NAMIAGLIQFE-FNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTI 118
Query: 220 RNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALE 279
+ ++ + S L Y R G L + V +M R++VAW++LI A +G + L
Sbjct: 119 KYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLY 178
Query: 280 TFHHMEMAKVLPDDITFLAVLKACS 304
+ M+++ P+ ITF+ VL +CS
Sbjct: 179 LYKMMKISGCRPNKITFVTVLSSCS 203
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 121/297 (40%), Gaps = 49/297 (16%)
Query: 5 AKLNQLRIMSYSSNYLRLISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLV 64
KL I+ S L++W + + + G + L ++ ++ S + V
Sbjct: 140 GKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKIS-GCRPNKITFVTV 198
Query: 65 LKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNV 124
L SCS + G IH+ +IK+G S V +L+ MY KC A K F E +
Sbjct: 199 LSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDE 258
Query: 125 VVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMR 184
V+W++MIS Y +A+ +F+ M
Sbjct: 259 VMWSSMISAYGFHGQGDEAIELFNTM--------------------------------AE 286
Query: 185 ELSLKPNLITLLALLRACVR-------MTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAY 237
+ +++ N + L LL AC + +M+ E +G P + + +V+
Sbjct: 287 QTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYG------FKPGLKHYTCVVDLL 340
Query: 238 GRCGCLINASNVFYNMK-ERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDD 293
GR GCL A + +M + D+V W +L+SA +H A A F E+ ++ P+D
Sbjct: 341 GRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFK--EILQIDPND 395
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 61/142 (42%), Gaps = 14/142 (9%)
Query: 233 LVEAYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPD 292
L+ Y R G L+NA VF M +R + W+++I+ L F M PD
Sbjct: 31 LINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPD 90
Query: 293 DITFLAVLKACSHAGLADDALDYFARMQQ------DYGLQPSSDHYSCLVDVLSRAGRLY 346
+ T +V AGL ++ QQ YGL+ S L + R G+L
Sbjct: 91 EYTLGSVFSGS--AGLRSVSIG-----QQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQ 143
Query: 347 EAYDIIRGMPVKVTVKAWGALL 368
+ +IR MPV+ V AW L+
Sbjct: 144 DGEIVIRSMPVRNLV-AWNTLI 164
>AT1G08070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:2514374-2516599 REVERSE
Length = 741
Score = 213 bits (543), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 127/419 (30%), Positives = 212/419 (50%), Gaps = 46/419 (10%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
++SW ++ + + G +++AL +F + + + D + V+ +C+ +LG +H
Sbjct: 231 VVSWNAMISGYAETGNYKEALELFKDMMKT-NVRPDESTMVTVVSACAQSGSIELGRQVH 289
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVS 141
GF SN + AL+D+Y KC +A LF+ +P ++V+ WN +I YTH N
Sbjct: 290 LWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYK 349
Query: 142 DALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRA 201
+AL +F M + + PN +T+L++L A
Sbjct: 350 EALLLFQEMLRSGET---------------------------------PNDVTMLSILPA 376
Query: 202 CVRMTSLNMIKEIHGCSIRNHIDPH-------PQLRSGLVEAYGRCGCLINASNVFYNMK 254
C + ++++ + IH +ID LR+ L++ Y +CG + A VF ++
Sbjct: 377 CAHLGAIDIGRWIH-----VYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSIL 431
Query: 255 ERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALD 314
+ + +W+++I +A+HG A ++ + F M + PDDITF+ +L ACSH+G+ D
Sbjct: 432 HKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRH 491
Query: 315 YFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTY 374
F M QDY + P +HY C++D+L +G EA ++I M ++ W +LL AC+ +
Sbjct: 492 IFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMH 551
Query: 375 GEVELAEIAGRALFEIEPDNPANYVLLARIYASMGRHGEAXXXXXXXXXXGVKVAPGGS 433
G VEL E L +IEP+NP +YVLL+ IYAS GR E G+K PG S
Sbjct: 552 GNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCS 610
Score = 138 bits (348), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 105/402 (26%), Positives = 195/402 (48%), Gaps = 21/402 (5%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
L+ W H AL ++ SL L + Y VLKSC+ + G IH
Sbjct: 99 LLIWNTMFRGHALSSDPVSALKLYV-CMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIH 157
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVS 141
H +K+G + +V +L+ MY + A K+FD+ P R+VV + A+I Y +
Sbjct: 158 GHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIE 217
Query: 142 DALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAK-AIAFYWRMRELSLKPNLITLLALLR 200
+A +FD + V D ++NA+I+G A E G+ K A+ + M + +++P+ T++ ++
Sbjct: 218 NAQKLFDEIPVK-DVVSWNAMISGYA--ETGNYKEALELFKDMMKTNVRPDESTMVTVVS 274
Query: 201 ACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVA 260
AC + S+ + +++H + + ++ + L++ Y +CG L A +F + +DV++
Sbjct: 275 ACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVIS 334
Query: 261 WSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQ 320
W++LI Y + AL F M + P+D+T L++L AC+H G D +
Sbjct: 335 WNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYID 394
Query: 321 QDY-GLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVEL 379
+ G+ +S + L+D+ ++ G + A+ + + K ++ +W A++ +G +
Sbjct: 395 KRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHK-SLSSWNAMIFGFAMHGRAD- 452
Query: 380 AEIAGRALFE------IEPDNPANYVLLARIYAS----MGRH 411
A LF I+PD+ LL+ S +GRH
Sbjct: 453 ---ASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRH 491
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 144/318 (45%), Gaps = 26/318 (8%)
Query: 64 VLKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVST--FS----ARKLFD 117
+L +C + ++ IH+ IK+G + + L++ C+ + F A +F
Sbjct: 39 LLHNCKTLQSLRI---IHAQMIKIGLHNTNYALSKLIEF---CILSPHFEGLPYAISVFK 92
Query: 118 EIPQRNVVVWNAMISLYTHSNCVSDALYMFDAM---HVAPDASTFNAIIAGLAGTEDGSA 174
I + N+++WN M + S+ AL ++ M + P++ TF ++ A ++
Sbjct: 93 TIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSK-AFK 151
Query: 175 KAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRS--G 232
+ + + +L +L +L+ V+ L ++ S PH + S
Sbjct: 152 EGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKS------PHRDVVSYTA 205
Query: 233 LVEAYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPD 292
L++ Y G + NA +F + +DVV+W+++IS YA G + ALE F M V PD
Sbjct: 206 LIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPD 265
Query: 293 DITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDII 352
+ T + V+ AC+ +G + + D+G + + L+D+ S+ G L A +
Sbjct: 266 ESTMVTVVSACAQSGSIELGRQVHLWI-DDHGFGSNLKIVNALIDLYSKCGELETACGLF 324
Query: 353 RGMPVKVTVKAWGALLGA 370
+P K V +W L+G
Sbjct: 325 ERLPYK-DVISWNTLIGG 341
>AT5G13270.1 | Symbols: RARE1 | pentatricopeptide (PPR)
repeat-containing protein | chr5:4246954-4249212 REVERSE
Length = 752
Score = 213 bits (543), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 126/413 (30%), Positives = 203/413 (49%), Gaps = 33/413 (7%)
Query: 23 ISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIHS 82
++ T + + + G + AL +F + T + D +V S+VLK+C+++ LG IH+
Sbjct: 251 VACTGLMVGYTQAGRARDALKLFVDLVTE-GVEWDSFVFSVVLKACASLEELNLGKQIHA 309
Query: 83 HSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSD 142
K+G S V LVD Y KC S SA + F EI + N V W+A+IS Y + +
Sbjct: 310 CVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEE 369
Query: 143 ALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRAC 202
A+ F ++ + +AS N+ T ++ +AC
Sbjct: 370 AVKTFKSLR-SKNASILNSF-------------------------------TYTSIFQAC 397
Query: 203 VRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWS 262
+ N+ ++H +I+ + S L+ Y +CGCL +A+ VF +M D+VAW+
Sbjct: 398 SVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWT 457
Query: 263 SLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQD 322
+ IS +A +G A AL F M + P+ +TF+AVL ACSHAGL + M +
Sbjct: 458 AFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRK 517
Query: 323 YGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVELAEI 382
Y + P+ DHY C++D+ +R+G L EA ++ MP + +W L C T+ +EL EI
Sbjct: 518 YNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEI 577
Query: 383 AGRALFEIEPDNPANYVLLARIYASMGRHGEAXXXXXXXXXXGVKVAPGGSWV 435
AG L +++P++ A YVL +Y G+ EA +K SW+
Sbjct: 578 AGEELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEMMKLMNERMLKKELSCSWI 630
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 91/383 (23%), Positives = 169/383 (44%), Gaps = 50/383 (13%)
Query: 1 MFCEAK-LNQLRIMSYSSNYLRLISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDP- 58
M+CE + L + + L +S T ++++ +QG +A+ +F+ + LA P
Sbjct: 127 MYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGM---LASGDKPP 183
Query: 59 -YVLSLVLKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFD 117
+ + +LKS G IH+H I+ G SN + +V+MY KC A+++FD
Sbjct: 184 SSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFD 243
Query: 118 EIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAI 177
++ + V ++ YT + DAL +F + + G+
Sbjct: 244 QMAVKKPVACTGLMVGYTQAGRARDALKLF-----------VDLVTEGVE---------- 282
Query: 178 AFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAY 237
W + +L+AC + LN+ K+IH C + ++ + + LV+ Y
Sbjct: 283 ---W---------DSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFY 330
Query: 238 GRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHM--EMAKVLPDDIT 295
+C +A F ++E + V+WS++IS Y + A++TF + + A +L + T
Sbjct: 331 IKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASIL-NSFT 389
Query: 296 FLAVLKACSHAGLADDALDYFARMQQD---YGLQPSSDHYSCLVDVLSRAGRLYEAYDII 352
+ ++ +ACS LAD + ++ D L S S L+ + S+ G L +A ++
Sbjct: 390 YTSIFQACS--VLAD--CNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVF 445
Query: 353 RGMPVKVTVKAWGALLGACRTYG 375
M + AW A + YG
Sbjct: 446 ESMD-NPDIVAWTAFISGHAYYG 467
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 112/272 (41%), Gaps = 41/272 (15%)
Query: 38 HQQALVVFNHIQT--SLALSLDPYVLSLVLKSCSAIHRSQLGAAIHSHSIKMGFLSNPFV 95
H++ F +Q +S+ Y + ++C + G +H ++MG + NP V
Sbjct: 61 HRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDR-MRMG-IENPSV 118
Query: 96 ---ACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMHV 152
C L MY +C S A KLFDE+ + N V MIS Y + A+ +F M
Sbjct: 119 LLQNCVL-QMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLA 177
Query: 153 APDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIK 212
+ D KP LL++ V +L+ +
Sbjct: 178 SGD---------------------------------KPPSSMYTTLLKSLVNPRALDFGR 204
Query: 213 EIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHG 272
+IH IR + + + +G+V Y +CG L+ A VF M + VA + L+ Y G
Sbjct: 205 QIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAG 264
Query: 273 EARSALETFHHMEMAKVLPDDITFLAVLKACS 304
AR AL+ F + V D F VLKAC+
Sbjct: 265 RARDALKLFVDLVTEGVEWDSFVFSVVLKACA 296
>AT4G25270.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:12937253-12938836 REVERSE
Length = 527
Score = 213 bits (541), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 121/389 (31%), Positives = 203/389 (52%), Gaps = 41/389 (10%)
Query: 23 ISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIHS 82
+W ++ + + G ++ A+ ++ + + D + VLK+C I Q+G AIH
Sbjct: 161 FAWNSLISGYAELGQYEDAMALYFQMAED-GVKPDRFTFPRVLKACGGIGSVQIGEAIHR 219
Query: 83 HSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSD 142
+K GF + +V ALV MY KC AR +FD IP ++ V WN+M++ Y H + +
Sbjct: 220 DLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHE 279
Query: 143 ALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRAC 202
AL +F M ++G ++P+ + + ++L
Sbjct: 280 ALDIFRLM------------------VQNG---------------IEPDKVAISSVL--- 303
Query: 203 VRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWS 262
R+ S +++HG IR ++ + + L+ Y + G L A +F M ERD V+W+
Sbjct: 304 ARVLSFKHGRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWN 363
Query: 263 SLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQD 322
++ISA H + + L+ F M A PD ITF++VL C++ G+ +D F+ M ++
Sbjct: 364 AIISA---HSKNSNGLKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKE 420
Query: 323 YGLQPSSDHYSCLVDVLSRAGRLYEAYD-IIRGMPVKVTVKAWGALLGACRTYGEVELAE 381
YG+ P +HY+C+V++ RAG + EAY I++ M ++ WGALL AC +G ++ E
Sbjct: 421 YGIDPKMEHYACMVNLYGRAGMMEEAYSMIVQEMGLEAGPTVWGALLYACYLHGNTDIGE 480
Query: 382 IAGRALFEIEPDNPANYVLLARIYASMGR 410
+A + LFE+EPDN N+ LL RIY+ R
Sbjct: 481 VAAQRLFELEPDNEHNFELLIRIYSKAKR 509
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 93/378 (24%), Positives = 165/378 (43%), Gaps = 52/378 (13%)
Query: 6 KLNQLRIMSYSSNYLRLISWTKQLNSHV---KQGFHQQALVVFNHIQTSLALS------- 55
+L Q R Y++N +S+TK + + KQ H+ L + + T L S
Sbjct: 30 QLKQHRQNQYNNNGFTSLSFTKPSPTPLLIEKQSIHRTQLEALDSVITDLETSAQKGISL 89
Query: 56 LDPYVLSLVLKSCSAIHRSQLGAAIHSHSIKMGFLSNPF-VACALVDMYGKCVSTFSARK 114
+P + + +L++C ++ G +H H I L N ++ LV +Y C A +
Sbjct: 90 TEPEIFASLLETCYSLRAIDHGVRVH-HLIPPYLLRNNLGISSKLVRLYASCGYAEVAHE 148
Query: 115 LFDEIPQRNV--VVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDG 172
+FD + +R+ WN++IS Y A L ED
Sbjct: 149 VFDRMSKRDSSPFAWNSLISGY-----------------------------AELGQYED- 178
Query: 173 SAKAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSG 232
A+A Y++M E +KP+ T +L+AC + S+ + + IH ++ + +
Sbjct: 179 ---AMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNA 235
Query: 233 LVEAYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPD 292
LV Y +CG ++ A NVF + +D V+W+S+++ Y HG AL+ F M + PD
Sbjct: 236 LVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPD 295
Query: 293 DITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDII 352
+ +VL + R ++ L + + L+ + S+ G+L +A I
Sbjct: 296 KVAISSVLARVLSFKHGRQLHGWVIRRGMEWELSVA----NALIVLYSKRGQLGQACFIF 351
Query: 353 RGMPVKVTVKAWGALLGA 370
M + TV +W A++ A
Sbjct: 352 DQMLERDTV-SWNAIISA 368
>AT3G20730.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:7247095-7248878 FORWARD
Length = 564
Score = 213 bits (541), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 140/487 (28%), Positives = 228/487 (46%), Gaps = 74/487 (15%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
++SWT ++ + G+H AL++F + + + + VLKSC + + G IH
Sbjct: 78 VVSWTAMISRFSRCGYHPDALLLFKEMHRE-DVKANQFTYGSVLKSCKDLGCLKEGMQIH 136
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVS 141
K N V AL+ +Y +C AR FD + +R++V WNAMI YT + C
Sbjct: 137 GSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACAD 196
Query: 142 DALYMFDAMHV---APDASTFNAIIA---------------GLA---GTEDGSA------ 174
+ +F M PD TF +++ GLA G SA
Sbjct: 197 TSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLV 256
Query: 175 ------KAIAFYWRMRELSLKPNLITLLAL------------------------------ 198
++A W++ E + K +L++ AL
Sbjct: 257 NAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDE 316
Query: 199 ------LRACVRMTSLNMIKEIHGCSIR-NHIDPHPQLRSGLVEAYGRCGCLINASNVFY 251
L+ C + S+ + ++IHG +++ + I L + L++ Y + G + +A F
Sbjct: 317 VVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFE 376
Query: 252 NMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADD 311
MKE+DV +W+SLI+ Y HG A++ ++ ME ++ P+D+TFL++L ACSH G +
Sbjct: 377 EMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQTEL 436
Query: 312 ALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMP--VKVTVKAWGALLG 369
+ M +G++ +H SC++D+L+R+G L EAY +IR V ++ WGA L
Sbjct: 437 GWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYALIRSKEGIVSLSSSTWGAFLD 496
Query: 370 ACRTYGEVELAEIAGRALFEIEPDNPANYVLLARIYASMGRHGEAXXXXXXXXXXG-VKV 428
ACR +G V+L+++A L +EP P NY+ LA +YA+ G A G
Sbjct: 497 ACRRHGNVQLSKVAATQLLSMEPRKPVNYINLASVYAANGAWDNALNTRKLMKESGSCNK 556
Query: 429 APGGSWV 435
APG S V
Sbjct: 557 APGYSLV 563
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 114/247 (46%), Gaps = 33/247 (13%)
Query: 56 LDPYVLSLVLKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKL 115
L P + LK CS + + IH +SI GF SN + L+D+Y K ARKL
Sbjct: 10 LSPSLYLKALKLCSYQNVKKQLLLIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKL 69
Query: 116 FDEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAK 175
FD I +R+VV W AMIS ++ DAL +F MH
Sbjct: 70 FDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMH------------------------ 105
Query: 176 AIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVE 235
RE +K N T ++L++C + L +IHG + + + +RS L+
Sbjct: 106 --------RE-DVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLS 156
Query: 236 AYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDIT 295
Y RCG + A F +MKERD+V+W+++I Y + A ++ F M PD T
Sbjct: 157 LYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFT 216
Query: 296 FLAVLKA 302
F ++L+A
Sbjct: 217 FGSLLRA 223
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 86/181 (47%), Gaps = 4/181 (2%)
Query: 188 LKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINAS 247
L P+L L L+ C + IHG SI N + QL+ L++ Y + G + +A
Sbjct: 10 LSPSL--YLKALKLCSYQNVKKQLLLIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHAR 67
Query: 248 NVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAG 307
+F + +RDVV+W+++IS ++ G AL F M V + T+ +VLK+C G
Sbjct: 68 KLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLG 127
Query: 308 LADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGAL 367
+ + +++ + S L+ + +R G++ EA M + V +W A+
Sbjct: 128 CLKEGMQIHGSVEKG-NCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLV-SWNAM 185
Query: 368 L 368
+
Sbjct: 186 I 186
>AT4G21065.2 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT4G33170.1); Has 16184 Blast hits to 5257
proteins in 175 species: Archae - 0; Bacteria - 4;
Metazoa - 118; Fungi - 47; Plants - 15742; Viruses - 0;
Other Eukaryotes - 273 (source: NCBI BLink). |
chr4:11246375-11247763 FORWARD
Length = 462
Score = 212 bits (539), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 110/314 (35%), Positives = 188/314 (59%), Gaps = 5/314 (1%)
Query: 124 VVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGS-AKAIAFYWR 182
+ V N+++ LY + V+ A +FD M D +N++I G A E+G +A+A Y
Sbjct: 23 IYVQNSLLHLYANCGDVASAYKVFDKMP-EKDLVAWNSVINGFA--ENGKPEEALALYTE 79
Query: 183 MRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGC 242
M +KP+ T+++LL AC ++ +L + K +H I+ + + + L++ Y RCG
Sbjct: 80 MNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGR 139
Query: 243 LINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAK-VLPDDITFLAVLK 301
+ A +F M +++ V+W+SLI A++G + A+E F +ME + +LP +ITF+ +L
Sbjct: 140 VEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILY 199
Query: 302 ACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTV 361
ACSH G+ + +YF RM+++Y ++P +H+ C+VD+L+RAG++ +AY+ I+ MP++ V
Sbjct: 200 ACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNV 259
Query: 362 KAWGALLGACRTYGEVELAEIAGRALFEIEPDNPANYVLLARIYASMGRHGEAXXXXXXX 421
W LLGAC +G+ +LAE A + ++EP++ +YVLL+ +YAS R +
Sbjct: 260 VIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQM 319
Query: 422 XXXGVKVAPGGSWV 435
GVK PG S V
Sbjct: 320 LRDGVKKVPGHSLV 333
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 114/276 (41%), Gaps = 43/276 (15%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
L++W +N + G ++AL ++ + S + D + + +L +C+ I LG +H
Sbjct: 54 LVAWNSVINGFAENGKPEEALALYTEM-NSKGIKPDGFTIVSLLSACAKIGALTLGKRVH 112
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVS 141
+ IK+G N + L+D+Y +C A+ LFDE+ +N V W ++
Sbjct: 113 VYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSL----------- 161
Query: 142 DALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRA 201
I GLA G F + L P IT + +L A
Sbjct: 162 ---------------------IVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYA 200
Query: 202 CVRMTSLNMIKE----IHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMK-ER 256
C + M+KE I+P + +V+ R G + A +M +
Sbjct: 201 C---SHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQP 257
Query: 257 DVVAWSSLISAYALHGEARSALETFHHMEMAKVLPD 292
+VV W +L+ A +HG+ S L F +++ ++ P+
Sbjct: 258 NVVIWRTLLGACTVHGD--SDLAEFARIQILQLEPN 291
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 85/167 (50%), Gaps = 8/167 (4%)
Query: 205 MTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWSSL 264
M + + + IH IR+ +++ L+ Y CG + +A VF M E+D+VAW+S+
Sbjct: 1 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSV 60
Query: 265 ISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQ--- 321
I+ +A +G+ AL + M + PD T +++L AC+ G AL R+
Sbjct: 61 INGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIG----ALTLGKRVHVYMI 116
Query: 322 DYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALL 368
GL + + L+D+ +R GR+ EA + M K +V +W +L+
Sbjct: 117 KVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSV-SWTSLI 162
>AT1G71490.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:26933326-26935371 REVERSE
Length = 681
Score = 211 bits (538), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 133/425 (31%), Positives = 204/425 (48%), Gaps = 37/425 (8%)
Query: 13 MSYSSNYLRLISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIH 72
M +S + +I+W ++ G + AL + + ++ + SLDP + + LK+CS I
Sbjct: 236 MWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMR-NFPTSLDPVAMIIGLKACSLIG 294
Query: 73 RSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMIS 132
+LG IH +I + V L+ MY KC A +F + + ++ WN++IS
Sbjct: 295 AIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIIS 354
Query: 133 LYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNL 192
Y N +A ++ M VA +PN
Sbjct: 355 GYAQLNKSEEASHLLREMLVA---------------------------------GFQPNS 381
Query: 193 ITLLALLRACVRMTSLNMIKEIHGCSI--RNHIDPHPQLRSGLVEAYGRCGCLINASNVF 250
ITL ++L C R+ +L KE H C I R + L + LV+ Y + G ++ A V
Sbjct: 382 ITLASILPLCARIANLQHGKEFH-CYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVS 440
Query: 251 YNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLAD 310
M +RD V ++SLI Y GE AL F M + + PD +T +AVL ACSH+ L
Sbjct: 441 DLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACSHSKLVH 500
Query: 311 DALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGA 370
+ F +MQ +YG++P H+SC+VD+ RAG L +A DII MP K + W LL A
Sbjct: 501 EGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYKPSGATWATLLNA 560
Query: 371 CRTYGEVELAEIAGRALFEIEPDNPANYVLLARIYASMGRHGEAXXXXXXXXXXGVKVAP 430
C +G ++ + A L E++P+NP YVL+A +YA+ G + GVK P
Sbjct: 561 CHIHGNTQIGKWAAEKLLEMKPENPGYYVLIANMYAAAGSWSKLAEVRTIMRDLGVKKDP 620
Query: 431 GGSWV 435
G +W+
Sbjct: 621 GCAWI 625
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 97/392 (24%), Positives = 178/392 (45%), Gaps = 8/392 (2%)
Query: 8 NQLRIMSYSSNYLRLISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKS 67
N+ + + +S+ L + W + S+ K ++ + + + S + D + VLK+
Sbjct: 95 NEAQSIIENSDILHPLPWNVLIASYAKNELFEEVIAAYKRM-VSKGIRPDAFTYPSVLKA 153
Query: 68 CSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVW 127
C G +H + S+ +V AL+ MY + + AR+LFD + +R+ V W
Sbjct: 154 CGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSW 213
Query: 128 NAMISLYTHSNCVSDALYMFDAM---HVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMR 184
NA+I+ Y S+A +FD M V T+N I G T + A+ RMR
Sbjct: 214 NAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGN-YVGALGLISRMR 272
Query: 185 ELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLI 244
+ + ++ L+AC + ++ + KEIHG +I + D +R+ L+ Y +C L
Sbjct: 273 NFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLR 332
Query: 245 NASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACS 304
+A VF +E + W+S+IS YA ++ A M +A P+ IT ++L C+
Sbjct: 333 HALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCA 392
Query: 305 HAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAW 364
++ + + + + ++ LVDV +++G++ A + M + V +
Sbjct: 393 RIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEV-TY 451
Query: 365 GALLGACRTYGE--VELAEIAGRALFEIEPDN 394
+L+ GE V LA I+PD+
Sbjct: 452 TSLIDGYGNQGEGGVALALFKEMTRSGIKPDH 483
>AT3G22150.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:7813028-7815490 FORWARD
Length = 820
Score = 211 bits (538), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 123/420 (29%), Positives = 220/420 (52%), Gaps = 42/420 (10%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
++SW +++ V+ G + L++ +Q +D ++ +L + S + ++G H
Sbjct: 384 VVSWNTMISAFVQNGLDDEGLMLVYEMQKQ-GFKIDYITVTALLSAASNLRNKEIGKQTH 442
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDE--IPQRNVVVWNAMISLYTHSNC 139
+ I+ G + + L+DMY K ++KLF+ +R+ WN+MIS Y
Sbjct: 443 AFLIRQG-IQFEGMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGY----- 496
Query: 140 VSDALYMFDAMHVAPDASTFNAIIAGLAGTEDG-SAKAIAFYWRMRELSLKPNLITLLAL 198
T++G + K + +M E +++PN +T+ ++
Sbjct: 497 -----------------------------TQNGHTEKTFLVFRKMLEQNIRPNAVTVASI 527
Query: 199 LRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDV 258
L AC ++ S+++ K++HG SIR ++D + + S LV+ Y + G + A ++F KER+
Sbjct: 528 LPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNS 587
Query: 259 VAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFAR 318
V ++++I Y HG A+ F M+ + + PD ITF+AVL ACS++GL D+ L F
Sbjct: 588 VTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEE 647
Query: 319 MQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTV-KAWGALLGACRTYGEV 377
M++ Y +QPSS+HY C+ D+L R GR+ EAY+ ++G+ + + + WG+LLG+C+ +GE+
Sbjct: 648 MREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHGEL 707
Query: 378 ELAEIAGRALFEIEP-DNPANY-VLLARIYASMGRHGEAXXXXXXXXXXGVKVAPGGSWV 435
ELAE L + + N + Y VLL+ +YA + G+K G S +
Sbjct: 708 ELAETVSERLAKFDKGKNFSGYEVLLSNMYAEEQKWKSVDKVRRGMREKGLKKEVGRSGI 767
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 84/377 (22%), Positives = 166/377 (44%), Gaps = 40/377 (10%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
+++W ++ +VK G + +A F I + + P V + S + +
Sbjct: 179 VVAWNTLISWYVKTGRNAEACRQFG-IMMRMEVKPSPVSFVNVFPAVSISRSIKKANVFY 237
Query: 82 SHSIKMG--FLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNC 139
+K+G ++ + FV + + MY + S+R++FD +RN+ VWN MI +Y ++C
Sbjct: 238 GLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDC 297
Query: 140 VSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALL 199
+ +++ +F AI GS + ++ + +T L
Sbjct: 298 LVESIELF-----------LEAI---------GSKEIVS------------DEVTYLLAA 325
Query: 200 RACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVV 259
A + + + ++ HG +N + + + L+ Y RCG + + VF +M+ERDVV
Sbjct: 326 SAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVV 385
Query: 260 AWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARM 319
+W+++ISA+ +G L + M+ D IT A+L A S+ + A +
Sbjct: 386 SWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFL 445
Query: 320 QQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKA-WGALLGACRTYGEVE 378
+ G+Q + S L+D+ S++G + + + G +A W +++ G E
Sbjct: 446 IRQ-GIQFEGMN-SYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTE 503
Query: 379 LAEIAGRALFE--IEPD 393
+ R + E I P+
Sbjct: 504 KTFLVFRKMLEQNIRPN 520
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 73/357 (20%), Positives = 149/357 (41%), Gaps = 47/357 (13%)
Query: 25 WTKQLNSHVKQGFHQQALVVFNHIQTSLALS-LDPYVLSLVLKSCSAIHRSQLGAAIHSH 83
W + + +AL+ ++ ++ + + D Y S LK+C+ + G A+H H
Sbjct: 73 WNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSSTLKACAETKNLKAGKAVHCH 132
Query: 84 SIKMGFLSNPFVACALVDMYGKCVSTFS------ARKLFDEIPQRNVVVWNAMISLYTHS 137
I+ S+ V +L++MY C++ RK+FD + ++NVV WN +IS Y +
Sbjct: 133 LIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFDNMRRKNVVAWNTLISWYVKT 192
Query: 138 NCVSDALYMFD---AMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLIT 194
++A F M V P +F + ++ + KA FY M L L +
Sbjct: 193 GRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRS-IKKANVFYGLM--LKLGDEYVK 249
Query: 195 LLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMK 254
L ++ + + M Y G + ++ VF +
Sbjct: 250 DLFVVSSAISM-------------------------------YAELGDIESSRRVFDSCV 278
Query: 255 ERDVVAWSSLISAYALHGEARSALETF-HHMEMAKVLPDDITFLAVLKACSHAGLADDAL 313
ER++ W+++I Y + ++E F + +++ D++T+L A S +
Sbjct: 279 ERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGR 338
Query: 314 DYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGA 370
+ + +++ P S +V + SR G +++++ + M + V +W ++ A
Sbjct: 339 QFHGFVSKNFRELPIVIVNSLMV-MYSRCGSVHKSFGVFLSMRERDVV-SWNTMISA 393
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 84/204 (41%), Gaps = 47/204 (23%)
Query: 112 ARKLFDEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTED 171
AR+LFD IP+ V+WN +I + +N +AL
Sbjct: 58 ARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALL-------------------------- 91
Query: 172 GSAKAIAFYWRMRELSLKPNL--ITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQL 229
FY RM++ + N T + L+AC +L K +H IR + +
Sbjct: 92 -------FYSRMKKTAPFTNCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVV 144
Query: 230 RSGLVEAYGRCGCLINASN---------VFYNMKERDVVAWSSLISAYALHGEARSALET 280
+ L+ Y C +NA + VF NM+ ++VVAW++LIS Y G A
Sbjct: 145 HNSLMNMYVSC---LNAPDCFEYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQ 201
Query: 281 FHHMEMAKVLPDDITFLAVLKACS 304
F M +V P ++F+ V A S
Sbjct: 202 FGIMMRMEVKPSPVSFVNVFPAVS 225
>AT3G22690.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:8020757-8024534 REVERSE
Length = 978
Score = 211 bits (536), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 133/413 (32%), Positives = 222/413 (53%), Gaps = 16/413 (3%)
Query: 30 NSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLV--LKSCSAIHRSQLGAAIHSHSIKM 87
+++V+QG ++AL VFN + S + P +S++ + SCS + G + H + ++
Sbjct: 310 SNYVRQGLTREALGVFNLMMDS---GVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRN 366
Query: 88 GFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSDALYMF 147
GF S + AL+DMY KC +A ++FD + + VV WN++++ Y + V A F
Sbjct: 367 GFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETF 426
Query: 148 DAMHVAPDAS--TFNAIIAGLAGTEDGS--AKAIAFYWRMR-ELSLKPNLITLLALLRAC 202
+ M P+ + ++N II+GL GS +AI + M+ + + + +T++++ AC
Sbjct: 427 ETM---PEKNIVSWNTIISGLV---QGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASAC 480
Query: 203 VRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWS 262
+ +L++ K I+ +N I +L + LV+ + RCG +A ++F ++ RDV AW+
Sbjct: 481 GHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWT 540
Query: 263 SLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQD 322
+ I A A+ G A A+E F M + PD + F+ L ACSH GL + F M +
Sbjct: 541 AAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKL 600
Query: 323 YGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVELAEI 382
+G+ P HY C+VD+L RAG L EA +I MP++ W +LL ACR G VE+A
Sbjct: 601 HGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAY 660
Query: 383 AGRALFEIEPDNPANYVLLARIYASMGRHGEAXXXXXXXXXXGVKVAPGGSWV 435
A + + P+ +YVLL+ +YAS GR + G++ PG S +
Sbjct: 661 AAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSI 713
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/386 (23%), Positives = 162/386 (41%), Gaps = 45/386 (11%)
Query: 11 RIMSYSSNYLRLISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSA 70
+ S +Y + + + G +A+++F + S +S D Y L +C+
Sbjct: 88 EVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNS-GISPDKYTFPFGLSACAK 146
Query: 71 IHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAM 130
G IH +KMG+ + FV +LV Y +C SARK+FDE+ +RNVV W +M
Sbjct: 147 SRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSM 206
Query: 131 ISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKP 190
I Y + DA+ +F M +R+ + P
Sbjct: 207 ICGYARRDFAKDAVDLFFRM--------------------------------VRDEEVTP 234
Query: 191 NLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVF 250
N +T++ ++ AC ++ L ++++ + I+ + + S LV+ Y +C + A +F
Sbjct: 235 NSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLF 294
Query: 251 YNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAG--- 307
++ +++ S Y G R AL F+ M + V PD I+ L+ + +CS
Sbjct: 295 DEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNIL 354
Query: 308 LADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGAL 367
Y R G + + + L+D+ + R A+ I M K TV W ++
Sbjct: 355 WGKSCHGYVLR----NGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNK-TVVTWNSI 409
Query: 368 LGACRTYGEVELAEIAGRALFEIEPD 393
+ GEV+ A FE P+
Sbjct: 410 VAGYVENGEVD----AAWETFETMPE 431
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/291 (21%), Positives = 116/291 (39%), Gaps = 45/291 (15%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
++SW ++ V+ ++A+ VF +Q+ ++ D + + +C + L I+
Sbjct: 434 IVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIY 493
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVS 141
+ K G + + LVDM+ +C SA +F+ + R+V W A I +
Sbjct: 494 YYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAE 553
Query: 142 DALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRA 201
A+ +FD M E LKP+ + + L A
Sbjct: 554 RAIELFD---------------------------------DMIEQGLKPDGVAFVGALTA 580
Query: 202 CVRMTSLNMIKEIHGCSIRNH-IDPHPQLRSGLVEAYGRCGCLINASNVFYNMK-ERDVV 259
C + KEI ++ H + P +V+ GR G L A + +M E + V
Sbjct: 581 CSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDV 640
Query: 260 AWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLAD 310
W+SL++A + G ++EMA + I LA + S+ L++
Sbjct: 641 IWNSLLAACRVQG----------NVEMAAYAAEKIQVLAPERTGSYVLLSN 681
>AT3G11460.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:3608250-3610121 FORWARD
Length = 623
Score = 210 bits (535), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 114/354 (32%), Positives = 180/354 (50%), Gaps = 33/354 (9%)
Query: 53 ALSLDPYVLSLVLKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSA 112
+S+D + ++ C+ LG ++H +K G S V + + MY KC S +
Sbjct: 151 GVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAG 210
Query: 113 RKLFDEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDG 172
R+LFDE+P + ++ WNA+IS Y+ + D
Sbjct: 211 RRLFDEMPVKGLITWNAVISGYSQNGLAYDV----------------------------- 241
Query: 173 SAKAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSG 232
+ Y +M+ + P+ TL+++L +C + + + E+ N P+ + +
Sbjct: 242 ----LELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNA 297
Query: 233 LVEAYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPD 292
+ Y RCG L A VF M + +V+W+++I Y +HG L F M + PD
Sbjct: 298 SISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPD 357
Query: 293 DITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDII 352
F+ VL ACSH+GL D L+ F M+++Y L+P +HYSCLVD+L RAGRL EA + I
Sbjct: 358 GAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFI 417
Query: 353 RGMPVKVTVKAWGALLGACRTYGEVELAEIAGRALFEIEPDNPANYVLLARIYA 406
MPV+ WGALLGAC+ + V++AE+A + E EP+N YVL++ IY+
Sbjct: 418 ESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYS 471
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 104/386 (26%), Positives = 178/386 (46%), Gaps = 48/386 (12%)
Query: 25 WTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIHSHS 84
W +L Q +++ ++ + S S D + +LKSC+++ G +H H
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRS-GSSPDAFSFPFILKSCASLSLPVSGQQLHCHV 79
Query: 85 IKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRN--VVVWNAMISLYTHSNCVSD 142
K G + PFV AL+ MY KC ARK+F+E PQ + V +NA+IS YT ++ V+D
Sbjct: 80 TKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTD 139
Query: 143 ALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRAC 202
A YMF RM+E + + +T+L L+ C
Sbjct: 140 AAYMFR---------------------------------RMKETGVSVDSVTMLGLVPLC 166
Query: 203 VRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWS 262
L + + +HG ++ +D + + + Y +CG + +F M + ++ W+
Sbjct: 167 TVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWN 226
Query: 263 SLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQD 322
++IS Y+ +G A LE + M+ + V PD T ++VL +C+H G A ++ +
Sbjct: 227 AVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLG-AKKIGHEVGKLVES 285
Query: 323 YGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVELAEI 382
G P+ + + + +R G L +A + MPVK V +W A++G YG + EI
Sbjct: 286 NGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLV-SWTAMIGC---YGMHGMGEI 341
Query: 383 AGRALFE------IEPDNPANYVLLA 402
G LF+ I PD ++L+
Sbjct: 342 -GLMLFDDMIKRGIRPDGAVFVMVLS 366
>AT2G03880.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:1181560-1183452 FORWARD
Length = 630
Score = 210 bits (535), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 137/419 (32%), Positives = 211/419 (50%), Gaps = 49/419 (11%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDP--YVLSLVLKSCSAIHRSQLGAA 79
+ISWT ++++ K HQ+AL + + L ++ P Y S VL+SC+ + ++
Sbjct: 127 VISWTTMISAYSKCKIHQKALEL---LVLMLRDNVRPNVYTYSSVLRSCNGMSDVRM--- 180
Query: 80 IHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNC 139
+H IK G S+ FV AL+D++ K P+
Sbjct: 181 LHCGIIKEGLESDVFVRSALIDVFAKLGE-----------PE------------------ 211
Query: 140 VSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALL 199
DAL +FD M V DA +N+II G A S A+ + RM+ TL ++L
Sbjct: 212 --DALSVFDEM-VTGDAIVWNSIIGGFA-QNSRSDVALELFKRMKRAGFIAEQATLTSVL 267
Query: 200 RACVRMTSLNMIKEIHGCSIRNHIDPHPQ---LRSGLVEAYGRCGCLINASNVFYNMKER 256
RAC + L + + H HI + Q L + LV+ Y +CG L +A VF MKER
Sbjct: 268 RACTGLALLELGMQAHV-----HIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKER 322
Query: 257 DVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYF 316
DV+ WS++IS A +G ++ AL+ F M+ + P+ IT + VL ACSHAGL +D YF
Sbjct: 323 DVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYF 382
Query: 317 ARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGE 376
M++ YG+ P +HY C++D+L +AG+L +A ++ M + W LLGACR
Sbjct: 383 RSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRN 442
Query: 377 VELAEIAGRALFEIEPDNPANYVLLARIYASMGRHGEAXXXXXXXXXXGVKVAPGGSWV 435
+ LAE A + + ++P++ Y LL+ IYA+ + G+K PG SW+
Sbjct: 443 MVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWI 501
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 137/322 (42%), Gaps = 46/322 (14%)
Query: 57 DPYVLSLVLKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLF 116
D S ++K C + G I H G F+ L++MY K A +LF
Sbjct: 60 DSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLF 119
Query: 117 DEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKA 176
D++PQRNV+ W MIS Y S C +H KA
Sbjct: 120 DQMPQRNVISWTTMISAY--SKC---------KIH----------------------QKA 146
Query: 177 IAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEA 236
+ M +++PN+ T ++LR+C M+ + M+ H I+ ++ +RS L++
Sbjct: 147 LELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVRML---HCGIIKEGLESDVFVRSALIDV 203
Query: 237 YGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITF 296
+ + G +A +VF M D + W+S+I +A + + ALE F M+ A + + T
Sbjct: 204 FAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATL 263
Query: 297 LAVLKACSHAGLADDALD---YFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIR 353
+VL+AC+ L + + + + QD L + LVD+ + G L +A +
Sbjct: 264 TSVLRACTGLALLELGMQAHVHIVKYDQDLILN------NALVDMYCKCGSLEDALRVFN 317
Query: 354 GMPVKVTVKAWGALLGACRTYG 375
M + V W ++ G
Sbjct: 318 QMKER-DVITWSTMISGLAQNG 338
>AT5G27110.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:9538572-9540647 REVERSE
Length = 691
Score = 210 bits (534), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 125/415 (30%), Positives = 203/415 (48%), Gaps = 35/415 (8%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
L++W + +V +G + + + N + L+ +L +CS G IH
Sbjct: 274 LVAWNSMIKGYVAKGDSKSCVEILNRMIIE-GTRPSQTTLTSILMACSRSRNLLHGKFIH 332
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVS 141
+ I+ ++ +V C+L+D+Y KC A +F + + WN MIS Y
Sbjct: 333 GYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYI------ 386
Query: 142 DALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRA 201
S N KA+ Y +M + +KP+++T ++L A
Sbjct: 387 ---------------SVGNWF------------KAVEVYDQMVSVGVKPDVVTFTSVLPA 419
Query: 202 CVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAW 261
C ++ +L K+IH + ++ L S L++ Y +CG A +F ++ ++DVV+W
Sbjct: 420 CSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSW 479
Query: 262 SSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQ 321
+ +ISAY HG+ R AL F M+ + PD +T LAVL AC HAGL D+ L +F++M+
Sbjct: 480 TVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRS 539
Query: 322 DYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMP-VKVTVKAWGALLGACRTYGEVELA 380
YG++P +HYSC++D+L RAGRL EAY+II+ P + L AC + E L
Sbjct: 540 KYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLG 599
Query: 381 EIAGRALFEIEPDNPANYVLLARIYASMGRHGEAXXXXXXXXXXGVKVAPGGSWV 435
+ R L E PD+ + Y++L +YAS A G++ PG SW+
Sbjct: 600 DRIARLLVENYPDDASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSWI 654
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 127/282 (45%), Gaps = 33/282 (11%)
Query: 25 WTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIHSHS 84
W ++ + K L VF + D + V+K+ A+ R LG IH+
Sbjct: 74 WNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLV 133
Query: 85 IKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSDAL 144
+K G++ + VA +LV MY K ++ ++FDE+P+R+V WN +IS + S
Sbjct: 134 VKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSG------ 187
Query: 145 YMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRACVR 204
+ KA+ + RM +PN ++L + AC R
Sbjct: 188 ---------------------------EAEKALELFGRMESSGFEPNSVSLTVAISACSR 220
Query: 205 MTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWSSL 264
+ L KEIH ++ + + S LV+ YG+C CL A VF M + +VAW+S+
Sbjct: 221 LLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSM 280
Query: 265 ISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHA 306
I Y G+++S +E + M + P T ++L ACS +
Sbjct: 281 IKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRS 322
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/372 (26%), Positives = 169/372 (45%), Gaps = 38/372 (10%)
Query: 24 SWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIHSH 83
SW ++ + G ++AL +F +++S + L++ + +CS + + G IH
Sbjct: 175 SWNTVISCFYQSGEAEKALELFGRMESS-GFEPNSVSLTVAISACSRLLWLERGKEIHRK 233
Query: 84 SIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSDA 143
+K GF + +V ALVDMYGKC AR++F ++P++++V WN+MI Y
Sbjct: 234 CVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSC 293
Query: 144 LYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRACV 203
+ + + M II G +P+ TL ++L AC
Sbjct: 294 VEILNRM-----------IIEGT----------------------RPSQTTLTSILMACS 320
Query: 204 RMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWSS 263
R +L K IHG IR+ ++ + L++ Y +CG A VF ++ +W+
Sbjct: 321 RSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNV 380
Query: 264 LISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQDY 323
+IS+Y G A+E + M V PD +TF +VL ACS + + +
Sbjct: 381 MISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESR 440
Query: 324 GLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVE--LAE 381
L+ S L+D+ S+ G EA+ I +P K V +W ++ A ++G+ L +
Sbjct: 441 -LETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVV-SWTVMISAYGSHGQPREALYQ 498
Query: 382 IAGRALFEIEPD 393
F ++PD
Sbjct: 499 FDEMQKFGLKPD 510
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 86/202 (42%), Gaps = 20/202 (9%)
Query: 195 LLALLRACVRMT-SLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNM 253
LL+LLR C T SL IK +H + + L L+ Y C +A +VF N
Sbjct: 6 LLSLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENF 65
Query: 254 KER-DVVAWSSLISAYALHGEARSALETFHHMEMAKV-LPDDITFLAVLKACSHAGLADD 311
R DV W+SL+S Y+ + LE F + + +PD TF V+KA G
Sbjct: 66 DIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALG---- 121
Query: 312 ALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRG-------MPVKVTVKAW 364
++ RM ++ Y C V V S +Y +++ MP + V +W
Sbjct: 122 -REFLGRMIHTLVVKSG---YVCDVVVASSLVGMYAKFNLFENSLQVFDEMPER-DVASW 176
Query: 365 GALLGACRTYGEVELA-EIAGR 385
++ GE E A E+ GR
Sbjct: 177 NTVISCFYQSGEAEKALELFGR 198
>AT4G19191.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 13 plant structures;
EXPRESSED DURING: 10 growth stages; CONTAINS InterPro
DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885);
BEST Arabidopsis thaliana protein match is: CRR22
(CHLORORESPIRATORY REDUCTION22); endonuclease
(TAIR:AT1G11290.1); Has 16668 Blast hits to 5144
proteins in 160 species: Archae - 1; Bacteria - 6;
Metazoa - 71; Fungi - 62; Plants - 16190; Viruses - 0;
Other Eukaryotes - 338 (source: NCBI BLink). |
chr4:10496228-10498192 FORWARD
Length = 654
Score = 210 bits (534), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 128/373 (34%), Positives = 185/373 (49%), Gaps = 44/373 (11%)
Query: 67 SCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVV 126
SC G IHSH+I +G + + MY K T SAR LFD + R V
Sbjct: 265 SCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVS 324
Query: 127 WNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMREL 186
W MIS Y + +AL +F AM + +
Sbjct: 325 WTVMISGYAEKGDMDEALALFHAMIKSGE------------------------------- 353
Query: 187 SLKPNLITLLALLRACVRMTSLNMIK------EIHGCSIRNHIDPHPQLRSGLVEAYGRC 240
KP+L+TLL+L+ C + SL K +I+GC R+++ + + L++ Y +C
Sbjct: 354 --KPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCK-RDNV----MICNALIDMYSKC 406
Query: 241 GCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVL 300
G + A ++F N E+ VV W+++I+ YAL+G AL+ F M P+ ITFLAVL
Sbjct: 407 GSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVL 466
Query: 301 KACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVT 360
+AC+H+G + +YF M+Q Y + P DHYSC+VD+L R G+L EA ++IR M K
Sbjct: 467 QACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPD 526
Query: 361 VKAWGALLGACRTYGEVELAEIAGRALFEIEPDNPANYVLLARIYASMGRHGEAXXXXXX 420
WGALL AC+ + V++AE A +LF +EP A YV +A IYA+ G
Sbjct: 527 AGIWGALLNACKIHRNVKIAEQAAESLFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSI 586
Query: 421 XXXXGVKVAPGGS 433
+K PG S
Sbjct: 587 MKQRNIKKYPGES 599
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 135/286 (47%), Gaps = 40/286 (13%)
Query: 24 SWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIHSH 83
+W Q+ V + ++L++F ++ + + V K+C+ + +H+H
Sbjct: 19 AWNLQIREAVNRNDPVESLLLFREMKRG-GFEPNNFTFPFVAKACARLADVGCCEMVHAH 77
Query: 84 SIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSDA 143
IK F S+ FV A VDM+ KC S A K+F+ +P+R
Sbjct: 78 LIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPER--------------------- 116
Query: 144 LYMFDAMHVAPDASTFNAIIAGL--AGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRA 201
DA+T+NA+++G +G D KA + + MR + P+ +T++ L+++
Sbjct: 117 -----------DATTWNAMLSGFCQSGHTD---KAFSLFREMRLNEITPDSVTVMTLIQS 162
Query: 202 CVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVF--YNMKERDVV 259
SL +++ +H IR +D + + + YG+CG L +A VF + +R VV
Sbjct: 163 ASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVV 222
Query: 260 AWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSH 305
+W+S+ AY++ GEA A + M + PD TF+ + +C +
Sbjct: 223 SWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQN 268
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 85/359 (23%), Positives = 146/359 (40%), Gaps = 57/359 (15%)
Query: 24 SWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIHSH 83
+W L+ + G +A +F ++ + ++ D + +++S S +L A+H+
Sbjct: 120 TWNAMLSGFCQSGHTDKAFSLFREMRLN-EITPDSVTVMTLIQSASFEKSLKLLEAMHAV 178
Query: 84 SIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQ--RNVVVWNAMISLYTHSNCVS 141
I++G VA + YGKC SA+ +F+ I + R VV WN+M Y+
Sbjct: 179 GIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAF 238
Query: 142 DALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRA 201
DA ++ M +RE KP+L T + L +
Sbjct: 239 DAFGLYCLM--------------------------------LRE-EFKPDLSTFINLAAS 265
Query: 202 CVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAW 261
C +L + IH +I D + + + Y + +A +F M R V+W
Sbjct: 266 CQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSW 325
Query: 262 SSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQ 321
+ +IS YA G+ AL FH M + PD +T L+++ C F ++
Sbjct: 326 TVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGK----------FGSLET 375
Query: 322 DYGLQPSSDHYSC----------LVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGA 370
+ +D Y C L+D+ S+ G ++EA DI P K TV W ++
Sbjct: 376 GKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEK-TVVTWTTMIAG 433
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 113/275 (41%), Gaps = 40/275 (14%)
Query: 23 ISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIHS 82
+SWT ++ + ++G +AL +F H D L ++ C + G I +
Sbjct: 323 VSWTVMISGYAEKGDMDEALALF-HAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDA 381
Query: 83 HSIKMGFLSNPFVAC-ALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVS 141
+ G + + C AL+DMY KC S AR +FD P++ VV W MI+ Y +
Sbjct: 382 RADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFL 441
Query: 142 DALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRA 201
+AL +F +M +L KPN IT LA+L+A
Sbjct: 442 EALKLFS---------------------------------KMIDLDYKPNHITFLAVLQA 468
Query: 202 CVRMTSLNMIKE-IHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKER-DVV 259
C SL E H +I P S +V+ GR G L A + NM + D
Sbjct: 469 CAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAG 528
Query: 260 AWSSLISAYALHGE---ARSALETFHHMEMAKVLP 291
W +L++A +H A A E+ ++E P
Sbjct: 529 IWGALLNACKIHRNVKIAEQAAESLFNLEPQMAAP 563
>AT5G55740.1 | Symbols: CRR21 | CRR21 (chlororespiratory reduction
21) | chr5:22561941-22564433 REVERSE
Length = 830
Score = 210 bits (534), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 131/475 (27%), Positives = 230/475 (48%), Gaps = 44/475 (9%)
Query: 2 FCEAKLNQLRIMSYSSNYLR-LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYV 60
+C+ L + M + + + +++W ++ +V+QG + A+ + ++ L D
Sbjct: 319 YCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLE-KLKYDCVT 377
Query: 61 LSLVLKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIP 120
L+ ++ + + +LG + + I+ F S+ +A ++DMY KC S A+K+FD
Sbjct: 378 LATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTV 437
Query: 121 QRNVVVWNAMISLYTHSNCVSDALYMFDAMH---VAPDASTFNAIIAGL----------- 166
++++++WN +++ Y S +AL +F M V P+ T+N II L
Sbjct: 438 EKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKD 497
Query: 167 ----------------------AGTEDG-SAKAIAFYWRMRELSLKPNLITLLALLRACV 203
++G S +AI F +M+E L+PN ++ L AC
Sbjct: 498 MFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACA 557
Query: 204 RMTSLNMIKEIHGCSIRNHIDPHPQL---RSGLVEAYGRCGCLINASNVFYNMKERDVVA 260
+ SL++ + IHG IRN H L + LV+ Y +CG + A VF + ++
Sbjct: 558 HLASLHIGRTIHGYIIRNL--QHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPL 615
Query: 261 WSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQ 320
+++ISAYAL+G + A+ + +E + PD+IT VL AC+HAG + A++ F +
Sbjct: 616 SNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIV 675
Query: 321 QDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVELA 380
++P +HY +VD+L+ AG +A +I MP K + +L+ +C + EL
Sbjct: 676 SKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMPFKPDARMIQSLVASCNKQRKTELV 735
Query: 381 EIAGRALFEIEPDNPANYVLLARIYASMGRHGEAXXXXXXXXXXGVKVAPGGSWV 435
+ R L E EP+N NYV ++ YA G E G+K PG SW+
Sbjct: 736 DYLSRKLLESEPENSGNYVTISNAYAVEGSWDEVVKMREMMKAKGLKKKPGCSWI 790
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 112/422 (26%), Positives = 189/422 (44%), Gaps = 73/422 (17%)
Query: 5 AKLNQLRIMSYSSNYLRL---ISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVL 61
AK + L I + LR+ SW + + G + AL+ F + + D +V+
Sbjct: 118 AKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFP-DNFVV 176
Query: 62 SLVLKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQ 121
V K+C A+ S+ G +H + +K G FVA +L DMYGKC A K+FDEIP
Sbjct: 177 PNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPD 236
Query: 122 RNVVVWNAMISLYTHSNCVSDALYMFDAMH---VAPDASTFNAII---AGLAGTEDG-SA 174
RN V WNA++ Y + +A+ +F M V P T + + A + G E+G +
Sbjct: 237 RNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQS 296
Query: 175 KAIA-----------------FY-----------------------WRM-----RELSLK 189
AIA FY W + + L
Sbjct: 297 HAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLV 356
Query: 190 PNLITLLALLR------ACVRMTS----------LNMIKEIHGCSIRNHIDPHPQLRSGL 233
+ I + L+R CV + + L + KE+ IR+ + L S +
Sbjct: 357 EDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTV 416
Query: 234 VEAYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDD 293
++ Y +CG +++A VF + E+D++ W++L++AYA G + AL F+ M++ V P+
Sbjct: 417 MDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNV 476
Query: 294 ITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIR 353
IT+ ++ + G D+A D F +MQ G+ P+ ++ +++ + + G EA +R
Sbjct: 477 ITWNLIILSLLRNGQVDEAKDMFLQMQSS-GIIPNLISWTTMMNGMVQNGCSEEAILFLR 535
Query: 354 GM 355
M
Sbjct: 536 KM 537
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 75/331 (22%), Positives = 137/331 (41%), Gaps = 41/331 (12%)
Query: 24 SWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIHSH 83
S+ +++S K G ++AL + + L + P + +L+ C G IH+
Sbjct: 37 SYFHRVSSLCKNGEIKEALSLVTEMDFR-NLRIGPEIYGEILQGCVYERDLSTGKQIHAR 95
Query: 84 SIKMG--FLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVS 141
+K G + N ++ LV Y KC + A LF ++ RNV W A+I +
Sbjct: 96 ILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCE 155
Query: 142 DALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRA 201
AL F M E + P+ + + +A
Sbjct: 156 GALMGF---------------------------------VEMLENEIFPDNFVVPNVCKA 182
Query: 202 CVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAW 261
C + + +HG +++ ++ + S L + YG+CG L +AS VF + +R+ VAW
Sbjct: 183 CGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAW 242
Query: 262 SSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADD-----ALDYF 316
++L+ Y +G+ A+ F M V P +T L A ++ G ++ A+
Sbjct: 243 NALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIV 302
Query: 317 ARMQQDYGLQPSSDHYSCLVDVLSRAGRLYE 347
M+ D L S ++ C V ++ A +++
Sbjct: 303 NGMELDNILGTSLLNFYCKVGLIEYAEMVFD 333
>AT1G62260.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:22997826-22999796 REVERSE
Length = 656
Score = 210 bits (534), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 127/386 (32%), Positives = 186/386 (48%), Gaps = 33/386 (8%)
Query: 81 HSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCV 140
H + F N +++ Y K SAR LFD++ R+ + WN MI Y H + +
Sbjct: 269 HGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRM 328
Query: 141 SDALYMFDAM----------------------------HVAPDAST--FNAIIAGLAGTE 170
DA +F M P+ T +N+IIA +
Sbjct: 329 EDAFALFSEMPNRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNK 388
Query: 171 DGSAKAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLR 230
D +A+ + RM KP+ TL +LL A + +L + ++H ++ I P +
Sbjct: 389 D-YKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVI-PDVPVH 446
Query: 231 SGLVEAYGRCGCLINASNVFYNMK-ERDVVAWSSLISAYALHGEARSALETFHHMEMAKV 289
+ L+ Y RCG ++ + +F MK +R+V+ W+++I YA HG A AL F M+ +
Sbjct: 447 NALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGI 506
Query: 290 LPDDITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAY 349
P ITF++VL AC+HAGL D+A F M Y ++P +HYS LV+V S G+ EA
Sbjct: 507 YPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAM 566
Query: 350 DIIRGMPVKVTVKAWGALLGACRTYGEVELAEIAGRALFEIEPDNPANYVLLARIYASMG 409
II MP + WGALL ACR Y V LA +A A+ +EP++ YVLL +YA MG
Sbjct: 567 YIITSMPFEPDKTVWGALLDACRIYNNVGLAHVAAEAMSRLEPESSTPYVLLYNMYADMG 626
Query: 410 RHGEAXXXXXXXXXXGVKVAPGGSWV 435
EA +K G SWV
Sbjct: 627 LWDEASQVRMNMESKRIKKERGSSWV 652
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 88/402 (21%), Positives = 167/402 (41%), Gaps = 42/402 (10%)
Query: 26 TKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIHSHSI 85
K+LN ++ G+ +A +F ++ ++ + + V + R +
Sbjct: 44 NKELNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVV 103
Query: 86 KMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSDALY 145
+ + +V+C + + ARKLFDE+P R+ WN MIS Y + + +AL
Sbjct: 104 TWNTMISGYVSCGGIRFLEE------ARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALL 157
Query: 146 MFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRACVRM 205
+F+ M +A +++A+I G ++G + +R + L L+A L R+
Sbjct: 158 LFEKMP-ERNAVSWSAMITGFC--QNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERL 214
Query: 206 TSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKE---------- 255
+ + +G + D + L+ YG+ G + A +F + +
Sbjct: 215 SEAAWVLGQYGSLVSGREDLVYAYNT-LIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEF 273
Query: 256 -----RDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLAD 310
++VV+W+S+I AY G+ SA F M+ D I++ ++ H +
Sbjct: 274 RERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDR----DTISWNTMIDGYVHVSRME 329
Query: 311 DALDYFARMQQDYGLQPSSDHYS--CLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALL 368
DA F+ M P+ D +S +V + G + A P K TV +W +++
Sbjct: 330 DAFALFSEM-------PNRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTV-SWNSII 381
Query: 369 GACRTYGEV-ELAEIAGRALFEIEPDNPANYVLLARIYASMG 409
A + E ++ R IE + P + L + + AS G
Sbjct: 382 AAYEKNKDYKEAVDLFIR--MNIEGEKPDPHTLTSLLSASTG 421
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 80/349 (22%), Positives = 141/349 (40%), Gaps = 79/349 (22%)
Query: 23 ISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIHS 82
+SW + ++ K +++A+ +F + DP+ L+ +L + + + +LG +H
Sbjct: 375 VSWNSIIAAYEKNKDYKEAVDLFIRMNIE-GEKPDPHTLTSLLSASTGLVNLRLGMQMHQ 433
Query: 83 HSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIP-QRNVVVWNAMISLYTHSNCVS 141
+K P V AL+ MY +C +R++FDE+ +R V+ WNAMI Y S
Sbjct: 434 IVVKTVIPDVP-VHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNAS 492
Query: 142 DALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRA 201
+AL +F GS K+ Y P+ IT +++L A
Sbjct: 493 EALNLF------------------------GSMKSNGIY---------PSHITFVSVLNA 519
Query: 202 CVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLV-EAYGRCGCLINASNVFYNMKERDVVA 260
C +GLV EA + +++ + M+
Sbjct: 520 CA--------------------------HAGLVDEAKAQFVSMMSVYKIEPQMEH----- 548
Query: 261 WSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKAC---SHAGLADDALDYFA 317
+SSL++ + G+ A+ M PD + A+L AC ++ GLA A + +
Sbjct: 549 YSSLVNVTSGQGQFEEAMYIITSMPFE---PDKTVWGALLDACRIYNNVGLAHVAAEAMS 605
Query: 318 RMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGA 366
R++ + SS Y L ++ + G EA + M K K G+
Sbjct: 606 RLEPE-----SSTPYVLLYNMYADMGLWDEASQVRMNMESKRIKKERGS 649
>AT2G02750.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:771641-773482 REVERSE
Length = 613
Score = 210 bits (534), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 128/365 (35%), Positives = 204/365 (55%), Gaps = 12/365 (3%)
Query: 55 SLDPYVLSLV--LKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSA 112
S +P ++ V + +C+++ Q G +H +K F V AL+DMY KC SA
Sbjct: 226 SEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSA 285
Query: 113 RKLFDEIPQ-RNVVVWNAMISLYTHSNCVSDALYMF---DAMHVAPDASTFNAIIAGLAG 168
+F E+ RN++ WN++IS + A+ +F D+ + PD++T+N++I+G
Sbjct: 286 YIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGF-- 343
Query: 169 TEDGSA-KAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHP 227
++ G +A F+ RM + + P+L L +LL AC + +L KEIHG I+ +
Sbjct: 344 SQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDI 403
Query: 228 QLRSGLVEAYGRCGCLINASNVF--YNMKERDVVAWSSLISAYALHGEARSALETFHHME 285
+ + L++ Y +CG A +F + K +D V W+ +IS Y HGE SA+E F +
Sbjct: 404 FVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGECESAIEIFELLR 463
Query: 286 MAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRL 345
KV P TF AVL ACSH G + F MQ++YG +PS++H C++D+L R+GRL
Sbjct: 464 EEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTEHIGCMIDLLGRSGRL 523
Query: 346 YEAYDIIRGMPVKVTVKAWGALLGACRTYGEVELAEIAGRALFEIEPDNPANYVLLARIY 405
EA ++I M + +LLG+CR + + L E A L E+EP+NPA +V+L+ IY
Sbjct: 524 REAKEVIDQMSEPSSSVY-SSLLGSCRQHLDPVLGEEAAMKLAELEPENPAPFVILSSIY 582
Query: 406 ASMGR 410
A++ R
Sbjct: 583 AALER 587
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/386 (24%), Positives = 173/386 (44%), Gaps = 47/386 (12%)
Query: 33 VKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIHSHSIKMGFLSN 92
++ GF + A +F + S ++ ++ VL C I + G +H ++K GF
Sbjct: 108 LENGFCRDAFRMFGDARVS-GSGMNSVTVASVLGGCGDI---EGGMQLHCLAMKSGFEME 163
Query: 93 PFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMHV 152
+V +LV MY +C A ++F+++P ++VV +NA IS L M++
Sbjct: 164 VYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFIS----------GLMENGVMNL 213
Query: 153 APDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELS-LKPNLITLLALLRACVRMTSLNMI 211
P S FN MR+ S +PN +T + + AC + +L
Sbjct: 214 VP--SVFNL---------------------MRKFSSEEPNDVTFVNAITACASLLNLQYG 250
Query: 212 KEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKE-RDVVAWSSLISAYAL 270
+++HG ++ + + L++ Y +C C +A VF +K+ R++++W+S+IS +
Sbjct: 251 RQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMI 310
Query: 271 HGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSD 330
+G+ +A+E F ++ + PD T+ +++ S G +A +F RM + PS
Sbjct: 311 NGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVV-MVPS-- 367
Query: 331 HYSCLVDVLSRAGRLYEAYD--IIRGMPVKVTV-KAWGALLGACRTYGEVELAEIAGRAL 387
CL +LS ++ + I G +K + L Y + L+ A R
Sbjct: 368 -LKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIF 426
Query: 388 FEIEPDNPANYVLLARIYASMGRHGE 413
EP P + V + + G+HGE
Sbjct: 427 DRFEP-KPKDPVFWNVMISGYGKHGE 451
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 83/378 (21%), Positives = 157/378 (41%), Gaps = 65/378 (17%)
Query: 52 LALSLDPYVLSLVLKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFS 111
L+ S + + +LKSC+ + G +H+ +K GF + F A ALV MY K
Sbjct: 25 LSHSPNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTD 84
Query: 112 ARKLFDEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMHVAP---DASTFNAIIAGLAG 168
A K+ DE+P+R + NA +S + DA MF V+ ++ T +++ G
Sbjct: 85 ALKVLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCGD 144
Query: 169 TEDGSAKAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQ 228
E G ++H ++++ +
Sbjct: 145 IEGG---------------------------------------MQLHCLAMKSGFEMEVY 165
Query: 229 LRSGLVEAYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHM-EMA 287
+ + LV Y RCG + A+ +F + + VV +++ IS +G F+ M + +
Sbjct: 166 VGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFS 225
Query: 288 KVLPDDITFLAVLKACSHAGLADDALDYFAR-----MQQDYGLQPSSDHYSCLVDVLSRA 342
P+D+TF+ + AC A L + L Y + M++++ + + L+D+ S+
Sbjct: 226 SEEPNDVTFVNAITAC--ASLLN--LQYGRQLHGLVMKKEFQFETMVG--TALIDMYSKC 279
Query: 343 GRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVELAEIAGRALFE------IEPDNPA 396
AY + + + +W +++ G+ E A LFE ++PD+ A
Sbjct: 280 RCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETA----VELFEKLDSEGLKPDS-A 334
Query: 397 NYVLLARIYASMGRHGEA 414
+ L ++ +G+ EA
Sbjct: 335 TWNSLISGFSQLGKVIEA 352
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 96/214 (44%), Gaps = 25/214 (11%)
Query: 36 GFHQQALVV--FNHIQTSLALSLDPYV--LSLVLKSCSAIHRSQLGAAIHSHSIKMGFLS 91
GF Q V+ F + L++ + P + L+ +L +CS I + G IH H IK
Sbjct: 342 GFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAER 401
Query: 92 NPFVACALVDMYGKCVSTFSARKLFD--EIPQRNVVVWNAMISLY-THSNCVSDALYMFD 148
+ FV +L+DMY KC + AR++FD E ++ V WN MIS Y H C S A+ +F+
Sbjct: 402 DIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGECES-AIEIFE 460
Query: 149 AMH---VAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRACVRM 205
+ V P +TF A+++ + + + F E KP+ + ++ R
Sbjct: 461 LLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTEHIGCMIDLLGRS 520
Query: 206 TSLNMIKEIHG--------------CSIRNHIDP 225
L KE+ S R H+DP
Sbjct: 521 GRLREAKEVIDQMSEPSSSVYSSLLGSCRQHLDP 554
>AT4G33170.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:15995701-15998673 REVERSE
Length = 990
Score = 209 bits (533), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 117/414 (28%), Positives = 206/414 (49%), Gaps = 34/414 (8%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
L++W + + + + L +F + S D + L+ V K+C + G +H
Sbjct: 482 LVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERS-DDFTLATVFKTCGFLFAINQGKQVH 540
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVS 141
+++IK G+ + +V+ ++DMY KC +A+ FD IP + V W MIS C+
Sbjct: 541 AYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMIS-----GCIE 595
Query: 142 DALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRA 201
+ G E+ +A + +MR + + P+ T+ L +A
Sbjct: 596 N-------------------------GEEE---RAFHVFSQMRLMGVLPDEFTIATLAKA 627
Query: 202 CVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAW 261
+T+L ++IH +++ + P + + LV+ Y +CG + +A +F ++ ++ AW
Sbjct: 628 SSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAW 687
Query: 262 SSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQ 321
++++ A HGE + L+ F M+ + PD +TF+ VL ACSH+GL +A + M
Sbjct: 688 NAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHG 747
Query: 322 DYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVELAE 381
DYG++P +HYSCL D L RAG + +A ++I M ++ + + LL ACR G+ E +
Sbjct: 748 DYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGK 807
Query: 382 IAGRALFEIEPDNPANYVLLARIYASMGRHGEAXXXXXXXXXXGVKVAPGGSWV 435
L E+EP + + YVLL+ +YA+ + E VK PG SW+
Sbjct: 808 RVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWI 861
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 92/358 (25%), Positives = 163/358 (45%), Gaps = 42/358 (11%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRS-QLGAAI 80
LISW + + G +A+ +F + L D Y ++ VLK+ S++ L +
Sbjct: 381 LISWNSVIAGIAQNGLEVEAVCLFMQL-LRCGLKPDQYTMTSVLKAASSLPEGLSLSKQV 439
Query: 81 HSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCV 140
H H+IK+ +S+ FV+ AL+D Y + A LF E ++V WNAM++ YT S+
Sbjct: 440 HVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILF-ERHNFDLVAWNAMMAGYTQSHDG 498
Query: 141 SDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLR 200
L +F MH + S + TL + +
Sbjct: 499 HKTLKLFALMHKQGERS---------------------------------DDFTLATVFK 525
Query: 201 ACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVA 260
C + ++N K++H +I++ D + SG+++ Y +CG + A F ++ D VA
Sbjct: 526 TCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVA 585
Query: 261 WSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQ 320
W+++IS +GE A F M + VLPD+ T + KA S + A
Sbjct: 586 WTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANAL 645
Query: 321 QDYGLQPSSDHY--SCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGE 376
+ L ++D + + LVD+ ++ G + +AY + + + + + + AW A+L +GE
Sbjct: 646 K---LNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEM-MNITAWNAMLVGLAQHGE 699
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 146/326 (44%), Gaps = 46/326 (14%)
Query: 22 LISWTKQLNSHVKQGFH-----QQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQL 76
L+SW L ++ + QQA ++F ++ + + LS +LK C +H +
Sbjct: 105 LVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYT-SRMTLSPMLKLC--LHSGYV 161
Query: 77 GAA--IHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLY 134
A+ H ++ K+G + FVA ALV++Y K + LF+E+P R+VV+WN M+ Y
Sbjct: 162 WASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAY 221
Query: 135 THSNCVSDALYMFDAMH----------------VAPDASTFNAIIAGLAGTEDGSAKAIA 178
+A+ + A H ++ D S + + G + S I
Sbjct: 222 LEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVSEII 281
Query: 179 F--------------------YWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCS 218
F + M E ++ + +T + +L V++ SL + +++H +
Sbjct: 282 FRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMA 341
Query: 219 IRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSAL 278
++ +D + + L+ Y + A VF NM ERD+++W+S+I+ A +G A+
Sbjct: 342 LKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAV 401
Query: 279 ETFHHMEMAKVLPDDITFLAVLKACS 304
F + + PD T +VLKA S
Sbjct: 402 CLFMQLLRCGLKPDQYTMTSVLKAAS 427
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 82/370 (22%), Positives = 156/370 (42%), Gaps = 46/370 (12%)
Query: 16 SSNYLRLISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQ 75
+S+ +I K L+ ++ G + L F + S + D L+L + +
Sbjct: 274 ASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVES-DVECDQVTFILMLATAVKVDSLA 332
Query: 76 LGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYT 135
LG +H ++K+G V+ +L++MY K AR +FD + +R+++ WN+
Sbjct: 333 LGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNS------ 386
Query: 136 HSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDG-SAKAIAFYWRMRELSLKPNLIT 194
+IAG+A ++G +A+ + ++ LKP+ T
Sbjct: 387 --------------------------VIAGIA--QNGLEVEAVCLFMQLLRCGLKPDQYT 418
Query: 195 LLALLRACVRM-TSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNM 253
+ ++L+A + L++ K++H +I+ + + + L++AY R C+ A + +
Sbjct: 419 MTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEA-EILFER 477
Query: 254 KERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDAL 313
D+VAW+++++ Y + L+ F M DD T V K C +
Sbjct: 478 HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGK 537
Query: 314 D---YFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGA 370
Y + D L SS ++D+ + G + A +PV V AW ++
Sbjct: 538 QVHAYAIKSGYDLDLWVSSG----ILDMYVKCGDMSAAQFAFDSIPVPDDV-AWTTMISG 592
Query: 371 CRTYGEVELA 380
C GE E A
Sbjct: 593 CIENGEEERA 602
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 102/231 (44%), Gaps = 32/231 (13%)
Query: 69 SAIHRSQLGAAIHSHSIKMGFLSNP--FVACALVDMYGKCVSTFSARKLFDEIPQRNVVV 126
+AI S L +H+ + F NP F+ L+ MY KC S AR++FD++P R++V
Sbjct: 48 NAITSSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVS 107
Query: 127 WNAMISLYTHSN-CVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRE 185
WN++++ Y S+ CV + + +A + +R+
Sbjct: 108 WNSILAAYAQSSECVVENI-----------------------------QQAFLLFRILRQ 138
Query: 186 LSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLIN 245
+ + +TL +L+ C+ + + HG + + +D + LV Y + G +
Sbjct: 139 DVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKE 198
Query: 246 ASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITF 296
+F M RDVV W+ ++ AY G A++ + + P++IT
Sbjct: 199 GKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITL 249
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 90/216 (41%), Gaps = 10/216 (4%)
Query: 196 LALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKE 255
LR + + L + K H + +P L + L+ Y +CG L A VF M +
Sbjct: 43 FGFLRNAITSSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPD 102
Query: 256 RDVVAWSSLISAYALHGEA-----RSALETFHHMEMAKVLPDDITFLAVLKACSHAGLAD 310
RD+V+W+S+++AYA E + A F + V +T +LK C H+G
Sbjct: 103 RDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYV- 161
Query: 311 DALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGA 370
A + F GL LV++ + G++ E + MP + V W +L A
Sbjct: 162 WASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVV-LWNLMLKA 220
Query: 371 CRTYGEVELAEIAGRALFEIEPDNPANYV--LLARI 404
G E A I + F NP LLARI
Sbjct: 221 YLEMGFKEEA-IDLSSAFHSSGLNPNEITLRLLARI 255
>AT5G04780.1 | Symbols: | INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: MEF1
(MITOCHONDRIAL RNA EDITING FACTOR 1) (TAIR:AT5G52630.1);
Has 13798 Blast hits to 4918 proteins in 150 species:
Archae - 0; Bacteria - 4; Metazoa - 59; Fungi - 36;
Plants - 13447; Viruses - 0; Other Eukaryotes - 252
(source: NCBI BLink). | chr5:1384564-1386447 FORWARD
Length = 627
Score = 209 bits (531), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 117/414 (28%), Positives = 206/414 (49%), Gaps = 34/414 (8%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
L+SW + + + +AL +F ++ + +S VL +C + +H
Sbjct: 119 LVSWNTMIGLYTRNRMESEALDIFLEMRNE-GFKFSEFTISSVLSACGVNCDALECKKLH 177
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVS 141
S+K N +V AL+D LY +
Sbjct: 178 CLSVKTCIDLNLYVGTALLD-------------------------------LYAKCGMIK 206
Query: 142 DALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRA 201
DA+ +F++M + T+++++AG ++ +A+ Y R + +SL+ N TL +++ A
Sbjct: 207 DAVQVFESMQ-DKSSVTWSSMVAGYVQNKN-YEEALLLYRRAQRMSLEQNQFTLSSVICA 264
Query: 202 CVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAW 261
C + +L K++H ++ + + S V+ Y +CG L + +F ++E+++ W
Sbjct: 265 CSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELW 324
Query: 262 SSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQ 321
+++IS +A H + + F M+ + P+++TF ++L C H GL ++ +F M+
Sbjct: 325 NTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRT 384
Query: 322 DYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVELAE 381
YGL P+ HYSC+VD+L RAG L EAY++I+ +P T WG+LL +CR Y +ELAE
Sbjct: 385 TYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAE 444
Query: 382 IAGRALFEIEPDNPANYVLLARIYASMGRHGEAXXXXXXXXXXGVKVAPGGSWV 435
+A LFE+EP+N N+VLL+ IYA+ + E VK G SW+
Sbjct: 445 VAAEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGKSWI 498
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 132/307 (42%), Gaps = 35/307 (11%)
Query: 64 VLKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRN 123
+L+ C+ A H I++ + + L++ Y KC AR++FD + +R+
Sbjct: 59 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 118
Query: 124 VVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRM 183
+V WN MI LYT + S+AL +F M
Sbjct: 119 LVSWNTMIGLYTRNRMESEALDIF---------------------------------LEM 145
Query: 184 RELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCL 243
R K + T+ ++L AC K++H S++ ID + + + L++ Y +CG +
Sbjct: 146 RNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMI 205
Query: 244 INASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKAC 303
+A VF +M+++ V WSS+++ Y + AL + + + + T +V+ AC
Sbjct: 206 KDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICAC 265
Query: 304 SHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKA 363
S+ + A + + G + S VD+ ++ G L E+Y I + K ++
Sbjct: 266 SNLAALIEGKQMHAVICKS-GFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEK-NLEL 323
Query: 364 WGALLGA 370
W ++
Sbjct: 324 WNTIISG 330
>AT3G49710.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:18437845-18440010 FORWARD
Length = 721
Score = 209 bits (531), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 122/417 (29%), Positives = 206/417 (49%), Gaps = 37/417 (8%)
Query: 23 ISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIHS 82
+SW + ++ + +AL ++ + +D + L+ VL + +++ G H
Sbjct: 206 VSWNSMIVAYGQHKEGAKALALYKEMIFK-GFKIDMFTLASVLNALTSLDHLIGGRQFHG 264
Query: 83 HSIKMGFLSNPFVACALVDMY---GKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNC 139
IK GF N V L+D Y G C + + K+F EI ++VVWN
Sbjct: 265 KLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNT---------- 314
Query: 140 VSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALL 199
+I+G + E+ S +A+ + +M+ + +P+ + + +
Sbjct: 315 ----------------------MISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVT 352
Query: 200 RACVRMTSLNMIKEIHGCSIRNHIDPHP-QLRSGLVEAYGRCGCLINASNVFYNMKERDV 258
AC ++S + K+IHG +I++HI + + + L+ Y + G L +A VF M E +
Sbjct: 353 SACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNA 412
Query: 259 VAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFAR 318
V+++ +I YA HG AL + M + + P+ ITF+AVL AC+H G D+ +YF
Sbjct: 413 VSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNT 472
Query: 319 MQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVE 378
M++ + ++P ++HYSC++D+L RAG+L EA I MP K AW ALLGACR + +
Sbjct: 473 MKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMA 532
Query: 379 LAEIAGRALFEIEPDNPANYVLLARIYASMGRHGEAXXXXXXXXXXGVKVAPGGSWV 435
LAE A L ++P YV+LA +YA + E ++ PG SW+
Sbjct: 533 LAERAANELMVMQPLAATPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWI 589
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 133/281 (47%), Gaps = 18/281 (6%)
Query: 77 GAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTH 136
G ++H+ +K S+ +++ V++Y KC AR F + NV +N ++ Y
Sbjct: 27 GKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKAYAK 86
Query: 137 SNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLL 196
+ + A +FD + PD ++N +I+G A + A A+ + RMR+L + + TL
Sbjct: 87 DSKIHIARQLFDEI-PQPDTVSYNTLISGYADARETFA-AMVLFKRMRKLGFEVDGFTLS 144
Query: 197 ALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKE- 255
L+ AC +++IK++H S+ D + + + V Y + G L A +VFY M E
Sbjct: 145 GLIAACC--DRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDEL 202
Query: 256 RDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDY 315
RD V+W+S+I AY H E AL + M D T +VL A + +LD+
Sbjct: 203 RDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALT-------SLDH 255
Query: 316 FARMQQDY------GLQPSSDHYSCLVDVLSRAGRLYEAYD 350
+Q + G +S S L+D S+ G YD
Sbjct: 256 LIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYD 296
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 137/289 (47%), Gaps = 31/289 (10%)
Query: 86 KMGFLSNPFV-------ACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSN 138
K+GF + F C VD+ K + FS FD N NA ++ Y+
Sbjct: 133 KLGFEVDGFTLSGLIAACCDRVDLI-KQLHCFSVSGGFDSYSSVN----NAFVTYYSKGG 187
Query: 139 CVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLAL 198
+ +A+ +F M D ++N++I ++G AKA+A Y M K ++ TL ++
Sbjct: 188 LLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEG-AKALALYKEMIFKGFKIDMFTLASV 246
Query: 199 LRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRC-GC--LINASNVFYNMKE 255
L A + L ++ HG I+ + + SGL++ Y +C GC + ++ VF +
Sbjct: 247 LNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILS 306
Query: 256 RDVVAWSSLISAYALHGE-ARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALD 314
D+V W+++IS Y+++ E + A+++F M+ PDD +F+ V ACS+ L
Sbjct: 307 PDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSN-------LS 359
Query: 315 YFARMQQDYGLQPSSDHYS-------CLVDVLSRAGRLYEAYDIIRGMP 356
++ +Q +GL S S L+ + ++G L +A + MP
Sbjct: 360 SPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMP 408
>AT2G01510.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:230752-232506 REVERSE
Length = 584
Score = 209 bits (531), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 124/392 (31%), Positives = 208/392 (53%), Gaps = 36/392 (9%)
Query: 21 RLISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAI 80
R+ W +V+ ++L+++ ++ L + D + V+K+ S + G A+
Sbjct: 73 RIFLWNTLFKGYVRNQLPFESLLLYKKMR-DLGVRPDEFTYPFVVKAISQLGDFSCGFAL 131
Query: 81 HSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCV 140
H+H +K GF VA LV MY K SA LF+ + +++V WNA +++ +
Sbjct: 132 HAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNS 191
Query: 141 SDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLR 200
+ AL F+ M DA F++ T++++L
Sbjct: 192 AIALEYFNKM--CADAVQFDSF-------------------------------TVVSMLS 218
Query: 201 ACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVA 260
AC ++ SL + +EI+ + + ID + + + ++ + +CG A +F MK+R+VV+
Sbjct: 219 ACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVS 278
Query: 261 WSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQ 320
WS++I YA++G++R AL F M+ + P+ +TFL VL ACSHAGL ++ YF+ M
Sbjct: 279 WSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMV 338
Query: 321 Q--DYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVE 378
Q D L+P +HY+C+VD+L R+G L EAY+ I+ MPV+ WGALLGAC + ++
Sbjct: 339 QSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGACAVHRDMI 398
Query: 379 LAEIAGRALFEIEPDNPANYVLLARIYASMGR 410
L + L E PD + +VLL+ IYA+ G+
Sbjct: 399 LGQKVADVLVETAPDIGSYHVLLSNIYAAAGK 430
>AT5G08490.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:2745208-2747757 REVERSE
Length = 849
Score = 208 bits (530), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 114/387 (29%), Positives = 208/387 (53%), Gaps = 7/387 (1%)
Query: 53 ALSLDPYVLSLVLKSCSAIHRSQLGAAIHSHSIKMGFLSN---PFVACALVDMYGKCVST 109
A++LD + +LK C + +H +S+K G L + P + AL+D Y KC +
Sbjct: 427 AITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNV 486
Query: 110 FSARKLFDEIPQRNVVV-WNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAG 168
A K+F + +R +V +N+++S Y +S DA +F M D +T++ ++ +
Sbjct: 487 EYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTT-DLTTWSLMVR-IYA 544
Query: 169 TEDGSAKAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQ 228
+AI + ++ ++PN +T++ LL C ++ SL+++++ HG IR + +
Sbjct: 545 ESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGLGD-IR 603
Query: 229 LRSGLVEAYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAK 288
L+ L++ Y +CG L +A +VF + RD+V ++++++ YA+HG + AL + HM +
Sbjct: 604 LKGTLLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTESN 663
Query: 289 VLPDDITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEA 348
+ PD + +L AC HAGL D L + ++ +G++P+ + Y+C VD+++R GRL +A
Sbjct: 664 IKPDHVFITTMLTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQYACAVDLIARGGRLDDA 723
Query: 349 YDIIRGMPVKVTVKAWGALLGACRTYGEVELAEIAGRALFEIEPDNPANYVLLARIYASM 408
Y + MPV+ WG LL AC TY ++L L + E D+ N+VL++ +YA+
Sbjct: 724 YSFVTQMPVEPNANIWGTLLRACTTYNRMDLGHSVANHLLQAESDDTGNHVLISNMYAAD 783
Query: 409 GRHGEAXXXXXXXXXXGVKVAPGGSWV 435
+ +K G SW+
Sbjct: 784 AKWEGVMELRNLMKKKEMKKPAGCSWL 810
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 141/318 (44%), Gaps = 42/318 (13%)
Query: 60 VLSLVLKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTF-SARKLFDE 118
++VL C + S G ++HS+ IK G + V ALV MY K F A FD
Sbjct: 124 TFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDG 183
Query: 119 IPQRNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIA 178
I ++VV WNA+I+ ++ +N ++DA F M P
Sbjct: 184 IADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEP------------------------ 219
Query: 179 FYWRMRELSLKPNLITLLALLRACVRM---TSLNMIKEIHGCSI-RNHIDPHPQLRSGLV 234
+PN T+ +L C M + ++IH + R+ + H + + LV
Sbjct: 220 ---------TEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLV 270
Query: 235 EAYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHM-EMAKVLPDD 293
Y R G + A+++F M +D+V+W+ +I+ YA + E A + FH++ V PD
Sbjct: 271 SFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDS 330
Query: 294 ITFLAVLKACSH-AGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDII 352
+T +++L C+ LA + ++ Y L+ +S + L+ +R G AY
Sbjct: 331 VTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVG-NALISFYARFGDTSAAYWAF 389
Query: 353 RGMPVKVTVKAWGALLGA 370
M K + +W A+L A
Sbjct: 390 SLMSTK-DIISWNAILDA 406
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 136/320 (42%), Gaps = 42/320 (13%)
Query: 57 DPYVLSLVLKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLF 116
D V V+K+C+++ G A+H K+G ++ V+ ++++MY KC +K+F
Sbjct: 20 DHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQKMF 79
Query: 117 DEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKA 176
++ + VVWN +++ + S C + + F AMH A +
Sbjct: 80 RQMDSLDPVVWNIVLTGLSVS-CGRETMRFFKAMHFADEP-------------------- 118
Query: 177 IAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEA 236
KP+ +T +L CVR+ K +H I+ ++ + + LV
Sbjct: 119 ------------KPSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSM 166
Query: 237 YGRCGCLI-NASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDIT 295
Y + G + +A F + ++DVV+W+++I+ ++ + A +F M P+ T
Sbjct: 167 YAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYAT 226
Query: 296 FLAVLKACSHAGLADDALDYFARMQQDYGLQPS---SDHYSC--LVDVLSRAGRLYEAYD 350
VL C A + + R Y +Q S + + C LV R GR+ EA
Sbjct: 227 IANVLPVC--ASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAAS 284
Query: 351 IIRGMPVKVTVKAWGALLGA 370
+ M K V +W ++
Sbjct: 285 LFTRMGSKDLV-SWNVVIAG 303
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 155/330 (46%), Gaps = 25/330 (7%)
Query: 90 LSNPFVACALVDMYGKCVSTFSARKLFDEIPQRN-----VVVWNAMISLYTHSNCVSDAL 144
++N CA +D K ++ S R++ + QR+ V V N+++S Y + +A
Sbjct: 227 IANVLPVCASMD---KNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAA 283
Query: 145 YMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRACVR 204
+F M + D ++N +IAG A + F+ + + + P+ +T++++L C +
Sbjct: 284 SLFTRMG-SKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQ 342
Query: 205 MTSLNMIKEIHGCSIR-NHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWSS 263
+T L KEIH +R +++ + + L+ Y R G A F M +D+++W++
Sbjct: 343 LTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNA 402
Query: 264 LISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHA---GLADDALDYFARMQ 320
++ A+A + L HH+ + D +T L++LK C + G + Y +
Sbjct: 403 ILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKA- 461
Query: 321 QDYGLQPSSDHY---SCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEV 377
GL + + L+D ++ G + A+ I G+ + T+ ++ +LL G
Sbjct: 462 ---GLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSH 518
Query: 378 ELAEIAGRALF-EIEPDNPANYVLLARIYA 406
+ A++ LF E+ + + L+ RIYA
Sbjct: 519 DDAQM----LFTEMSTTDLTTWSLMVRIYA 544
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 101/229 (44%), Gaps = 24/229 (10%)
Query: 195 LLALLRACVRMTSLNMIKEIHGCSIR-NHIDPHPQLRSGLVEAYGRCGCLINASNVFYNM 253
L +++AC ++ L + +HGC + HI ++ ++ Y +C + + +F M
Sbjct: 24 FLDVVKACASVSDLTSGRALHGCVFKLGHI-ACSEVSKSVLNMYAKCRRMDDCQKMFRQM 82
Query: 254 KERDVVAWSSLISAYALHGEARSALETFHHMEMA-KVLPDDITFLAVLKACSHAGLADDA 312
D V W+ +++ ++ R + F M A + P +TF VL C G +
Sbjct: 83 DSLDPVVWNIVLTGLSVSC-GRETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLGDS--- 138
Query: 313 LDYFARMQQDY----GLQPSSDHYSCLVDVLSRAGRLY-EAYDIIRGMPVKVTVKAWGAL 367
Y + Y GL+ + + LV + ++ G ++ +AY G+ K V +W A+
Sbjct: 139 --YNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADK-DVVSWNAI 195
Query: 368 LGACRTYGEVELAEIAGRA--LFEIEPDNPANYVLLARIY---ASMGRH 411
+ + E + A R+ L EP P NY +A + ASM ++
Sbjct: 196 IAG---FSENNMMADAFRSFCLMLKEPTEP-NYATIANVLPVCASMDKN 240
>AT3G05340.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:1524071-1526047 REVERSE
Length = 658
Score = 208 bits (529), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 126/411 (30%), Positives = 207/411 (50%), Gaps = 36/411 (8%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
+I+ T ++ ++ H+ L +F+ ++ L LS L +CS R G IH
Sbjct: 221 VITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLS-ALAACSGSQRIVEGQQIH 279
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVS 141
+ K G S + AL+DMY KC S +
Sbjct: 280 ALLWKYGIESELCIESALMDMYSKCGS-------------------------------IE 308
Query: 142 DALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAK-AIAFYWRMRELSLKPNLITLLALLR 200
DA +F++ D + I+ GLA ++GS + AI F+ RM + ++ + + A+L
Sbjct: 309 DAWTIFEST-TEVDEVSMTVILVGLA--QNGSEEEAIQFFIRMLQAGVEIDANVVSAVLG 365
Query: 201 ACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVA 260
SL + K++H I+ + + +GL+ Y +CG L ++ VF M +R+ V+
Sbjct: 366 VSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVS 425
Query: 261 WSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQ 320
W+S+I+A+A HG +AL+ + M +V P D+TFL++L ACSH GL D + M+
Sbjct: 426 WNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMK 485
Query: 321 QDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVELA 380
+ +G++P ++HY+C++D+L RAG L EA I +P+K K W ALLGAC +G+ E+
Sbjct: 486 EVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALLGACSFHGDTEVG 545
Query: 381 EIAGRALFEIEPDNPANYVLLARIYASMGRHGEAXXXXXXXXXXGVKVAPG 431
E A LF+ PD+ + ++L+A IY+S G+ E GV G
Sbjct: 546 EYAAEQLFQTAPDSSSAHILIANIYSSRGKWKERAKTIKRMKAMGVTKETG 596
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 120/271 (44%), Gaps = 6/271 (2%)
Query: 118 EIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAI 177
+I + +VVWN+++SLY + DA+ +FD M + D + N + G + +
Sbjct: 84 DIHRNALVVWNSLLSLYAKCGKLVDAIKLFDEMPMR-DVISQNIVFYGFLRNRETES--- 139
Query: 178 AFYWRMREL-SLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEA 236
F R L S + TL +L C + K IH +I + D + + L+ +
Sbjct: 140 GFVLLKRMLGSGGFDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITS 199
Query: 237 YGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITF 296
Y +CGC ++ VF M R+V+ +++IS + L F M V P+ +T+
Sbjct: 200 YFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTY 259
Query: 297 LAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMP 356
L+ L ACS + + A + + YG++ S L+D+ S+ G + +A+ I
Sbjct: 260 LSALAACSGSQRIVEGQQIHALLWK-YGIESELCIESALMDMYSKCGSIEDAWTIFESTT 318
Query: 357 VKVTVKAWGALLGACRTYGEVELAEIAGRAL 387
V L+G + E E + R L
Sbjct: 319 EVDEVSMTVILVGLAQNGSEEEAIQFFIRML 349
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/323 (22%), Positives = 131/323 (40%), Gaps = 41/323 (12%)
Query: 56 LDPYVLSLVLKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKL 115
D L++VL C + IH+ +I G+ V L+ Y KC + S R +
Sbjct: 153 FDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGV 212
Query: 116 FDEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAK 175
FD + RNV+ A+IS + D L +F M
Sbjct: 213 FDGMSHRNVITLTAVISGLIENELHEDGLRLFSLM------------------------- 247
Query: 176 AIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVE 235
R + PN +T L+ L AC + ++IH + I+ + S L++
Sbjct: 248 --------RRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMD 299
Query: 236 AYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDIT 295
Y +CG + +A +F + E D V+ + ++ A +G A++ F M A V D
Sbjct: 300 MYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANV 359
Query: 296 FLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHY---SCLVDVLSRAGRLYEAYDII 352
AVL D++L ++ + S + + L+++ S+ G L ++ +
Sbjct: 360 VSAVLG----VSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVF 415
Query: 353 RGMPVKVTVKAWGALLGACRTYG 375
R MP + V +W +++ A +G
Sbjct: 416 RRMPKRNYV-SWNSMIAAFARHG 437
>AT4G13650.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:7939611-7942898 REVERSE
Length = 1064
Score = 208 bits (529), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 113/414 (27%), Positives = 194/414 (46%), Gaps = 34/414 (8%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
++SWT + + + F +AL F + + D L+ + +C+ + + G IH
Sbjct: 556 VVSWTTMIAGYTQYNFDDKALTTFRQM-LDRGIRSDEVGLTNAVSACAGLQALKEGQQIH 614
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVS 141
+ + GF S+ ALV +Y +C + F++ + + WNA++S + S
Sbjct: 615 AQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSG--- 671
Query: 142 DALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRA 201
+ +A+ + RM + N T + ++A
Sbjct: 672 ------------------------------NNEEALRVFVRMNREGIDNNNFTFGSAVKA 701
Query: 202 CVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAW 261
++ K++H + D ++ + L+ Y +CG + +A F + ++ V+W
Sbjct: 702 ASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSW 761
Query: 262 SSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQ 321
+++I+AY+ HG AL++F M + V P+ +T + VL ACSH GL D + YF M
Sbjct: 762 NAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNS 821
Query: 322 DYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVELAE 381
+YGL P +HY C+VD+L+RAG L A + I+ MP+K W LL AC + +E+ E
Sbjct: 822 EYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGE 881
Query: 382 IAGRALFEIEPDNPANYVLLARIYASMGRHGEAXXXXXXXXXXGVKVAPGGSWV 435
A L E+EP++ A YVLL+ +YA + GVK PG SW+
Sbjct: 882 FAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWI 935
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/361 (23%), Positives = 156/361 (43%), Gaps = 42/361 (11%)
Query: 23 ISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIHS 82
+++ +N + G+ ++A+ +F + L D L+ ++ +CSA G +H+
Sbjct: 355 VTYNTLINGLSQCGYGEKAMELFKRMHLD-GLEPDSNTLASLVVACSADGTLFRGQQLHA 413
Query: 83 HSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSD 142
++ K+GF SN + AL+++Y KC +A F E NVV+WN M+ Y + + +
Sbjct: 414 YTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRN 473
Query: 143 ALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRAC 202
+ +F M + + PN T ++L+ C
Sbjct: 474 SFRIFRQMQIE---------------------------------EIVPNQYTYPSILKTC 500
Query: 203 VRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWS 262
+R+ L + ++IH I+ + + + S L++ Y + G L A ++ +DVV+W+
Sbjct: 501 IRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWT 560
Query: 263 SLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQD 322
++I+ Y + AL TF M + D++ + AC AGL AL ++
Sbjct: 561 TMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSAC--AGL--QALKEGQQIHAQ 616
Query: 323 ---YGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVEL 379
G + LV + SR G++ E+Y + AW AL+ + G E
Sbjct: 617 ACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNI-AWNALVSGFQQSGNNEE 675
Query: 380 A 380
A
Sbjct: 676 A 676
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/351 (23%), Positives = 159/351 (45%), Gaps = 36/351 (10%)
Query: 24 SWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIHSH 83
SW ++ K +A+ +F + L + PY S VL +C I ++G +H
Sbjct: 255 SWVAMISGLSKNECEAEAIRLFCDMYV-LGIMPTPYAFSSVLSACKKIESLEIGEQLHGL 313
Query: 84 SIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSDA 143
+K+GF S+ +V NA++SLY H + A
Sbjct: 314 VLKLGFSSDTYVC-------------------------------NALVSLYFHLGNLISA 342
Query: 144 LYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRACV 203
++F M DA T+N +I GL+ G KA+ + RM L+P+ TL +L+ AC
Sbjct: 343 EHIFSNMS-QRDAVTYNTLINGLSQCGYGE-KAMELFKRMHLDGLEPDSNTLASLVVACS 400
Query: 204 RMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWSS 263
+L +++H + + + ++ L+ Y +C + A + F + +VV W+
Sbjct: 401 ADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNV 460
Query: 264 LISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQDY 323
++ AY L + R++ F M++ +++P+ T+ ++LK C G + +++ +
Sbjct: 461 MLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKT- 519
Query: 324 GLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTY 374
Q ++ S L+D+ ++ G+L A+DI+ K V +W ++ Y
Sbjct: 520 NFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVV-SWTTMIAGYTQY 569
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 111/220 (50%), Gaps = 3/220 (1%)
Query: 88 GFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSDALYMF 147
G S AC + V AR L+ + + + VV N +I LY+ + V A +F
Sbjct: 187 GTFSGVLEACRGGSVAFDVVEQIHARILYQGL-RDSTVVCNPLIDLYSRNGFVDLARRVF 245
Query: 148 DAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRACVRMTS 207
D + + D S++ A+I+GL+ E A+AI + M L + P ++L AC ++ S
Sbjct: 246 DGLRL-KDHSSWVAMISGLSKNE-CEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIES 303
Query: 208 LNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWSSLISA 267
L + +++HG ++ + + LV Y G LI+A ++F NM +RD V +++LI+
Sbjct: 304 LEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLING 363
Query: 268 YALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAG 307
+ G A+E F M + + PD T +++ ACS G
Sbjct: 364 LSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADG 403
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/337 (21%), Positives = 137/337 (40%), Gaps = 36/337 (10%)
Query: 39 QQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACA 98
+ + +F +Q + + Y +LK+C + +LG IHS IK F N +V
Sbjct: 472 RNSFRIFRQMQIE-EIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSV 530
Query: 99 LVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDAST 158
L+DMY K +A + ++VV W MI+ YT Y FD
Sbjct: 531 LIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQ--------YNFD---------- 572
Query: 159 FNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCS 218
KA+ + +M + ++ + + L + AC + +L ++IH +
Sbjct: 573 ---------------DKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQA 617
Query: 219 IRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSAL 278
+ ++ LV Y RCG + + F + D +AW++L+S + G AL
Sbjct: 618 CVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEAL 677
Query: 279 ETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDV 338
F M + ++ TF + +KA S A + + G ++ + L+ +
Sbjct: 678 RVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKT-GYDSETEVCNALISM 736
Query: 339 LSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYG 375
++ G + +A + K V +W A++ A +G
Sbjct: 737 YAKCGSISDAEKQFLEVSTKNEV-SWNAIINAYSKHG 772
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/347 (23%), Positives = 140/347 (40%), Gaps = 55/347 (15%)
Query: 60 VLSLVLKSCSAIHRS-QLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDE 118
L +L+ C + S G +HS +K+G SN ++ L D Y + A K+FDE
Sbjct: 86 TLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDE 145
Query: 119 IPQRNVVVWNAMISLYTHSNCVSDALYMFDAM---HVAPDASTFNAIIAGLAGTEDGSAK 175
+P+R + WN MI N + + +F M +V P+ TF+ ++ G
Sbjct: 146 MPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGG------ 199
Query: 176 AIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVE 235
++AF +++++IH + + + + L++
Sbjct: 200 SVAF-----------------------------DVVEQIHARILYQGLRDSTVVCNPLID 230
Query: 236 AYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDIT 295
Y R G + A VF ++ +D +W ++IS + + A+ F M + ++P
Sbjct: 231 LYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYA 290
Query: 296 FLAVLKACSHAGLADDALDYFARMQQDYG----LQPSSDHYSC--LVDVLSRAGRLYEAY 349
F +VL AC ++ +Q +G L SSD Y C LV + G L A
Sbjct: 291 FSSVLSACK-------KIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAE 343
Query: 350 DIIRGMPVK--VTVKAWGALLGACRTYGEVELAEIAGRALFEIEPDN 394
I M + VT L C YGE + L +EPD+
Sbjct: 344 HIFSNMSQRDAVTYNTLINGLSQC-GYGEKAMELFKRMHLDGLEPDS 389
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 93/225 (41%), Gaps = 13/225 (5%)
Query: 147 FDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRE------------LSLKPNLIT 194
F +H P + L GT S AI+ Y E ++PN T
Sbjct: 27 FIFIHGVPRKLKTRTVFPTLCGTRRASFAAISVYISEDESFQEKRIDSVENRGIRPNHQT 86
Query: 195 LLALLRACVRMT-SLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNM 253
L LL C++ SL+ +++H ++ +D + L L + Y G L A VF M
Sbjct: 87 LKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEM 146
Query: 254 KERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDAL 313
ER + W+ +I A F M V P++ TF VL+AC +A D +
Sbjct: 147 PERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVV 206
Query: 314 DYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVK 358
+ GL+ S+ + L+D+ SR G + A + G+ +K
Sbjct: 207 EQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLK 251
>AT4G31070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:15118696-15120537 REVERSE
Length = 613
Score = 207 bits (528), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 122/393 (31%), Positives = 209/393 (53%), Gaps = 41/393 (10%)
Query: 23 ISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSL--VLKSCSAI-HRSQLGAA 79
+SWT ++ V ++ + +F +Q +L P ++L VL +C + + S L
Sbjct: 217 VSWTAMISGCVANQNYEMGVDLFRAMQRE---NLRPNRVTLLSVLPACVELNYGSSLVKE 273
Query: 80 IHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNC 139
IH S + G ++ + A + MY +C + +R LF+ R+VV+W++MIS Y +
Sbjct: 274 IHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGD 333
Query: 140 VSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALL 199
S+ + + + +MR+ ++ N +TLLA++
Sbjct: 334 CSEVMNLLN---------------------------------QMRKEGIEANSVTLLAIV 360
Query: 200 RACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVV 259
AC T L+ +H ++ H L + L++ Y +CG L A VFY + E+D+V
Sbjct: 361 SACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLV 420
Query: 260 AWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARM 319
+WSS+I+AY LHG ALE F M DD+ FLA+L AC+HAGL ++A F +
Sbjct: 421 SWSSMINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIFTQA 480
Query: 320 QQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVEL 379
+ Y + + +HY+C +++L R G++ +A+++ MP+K + + W +LL AC T+G +++
Sbjct: 481 GK-YHMPVTLEHYACYINLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACETHGRLDV 539
Query: 380 A-EIAGRALFEIEPDNPANYVLLARIYASMGRH 411
A +I L + EPDNPANYVLL++I+ G +
Sbjct: 540 AGKIIANELMKSEPDNPANYVLLSKIHTESGNY 572
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 140/280 (50%), Gaps = 5/280 (1%)
Query: 97 CALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDA 156
C + K F A L DE Q +V++ A++ +Y + + A ++FD M V +
Sbjct: 158 CTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEV 217
Query: 157 STFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRACVRMT-SLNMIKEIH 215
S + A+I+G ++ F RE +L+PN +TLL++L ACV + +++KEIH
Sbjct: 218 S-WTAMISGCVANQNYEMGVDLFRAMQRE-NLRPNRVTLLSVLPACVELNYGSSLVKEIH 275
Query: 216 GCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEAR 275
G S R+ +L + + Y RCG + + +F K RDVV WSS+IS YA G+
Sbjct: 276 GFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCS 335
Query: 276 SALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCL 335
+ + M + + +T LA++ AC+++ L A +++ + G + L
Sbjct: 336 EVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILK-CGFMSHILLGNAL 394
Query: 336 VDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYG 375
+D+ ++ G L A ++ + K V +W +++ A +G
Sbjct: 395 IDMYAKCGSLSAAREVFYELTEKDLV-SWSSMINAYGLHG 433
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 130/295 (44%), Gaps = 37/295 (12%)
Query: 1 MFCE-AKLNQLRIMSYSSNYLRLISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPY 59
M+C ++ R++ +S ++ W+ ++ + + G + + + N ++ + +
Sbjct: 296 MYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKE-GIEANSV 354
Query: 60 VLSLVLKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEI 119
L ++ +C+ + +HS +K GF+S+ + AL+DMY KC S +AR++F E+
Sbjct: 355 TLLAIVSACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYEL 414
Query: 120 PQRNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAF 179
++++V W++MI+ Y S+AL +F M I G +D
Sbjct: 415 TEKDLVSWSSMINAYGLHGHGSEALEIFKGM------------IKGGHEVDD-------- 454
Query: 180 YWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGR 239
+ LA+L AC + + I + + H+ + + + GR
Sbjct: 455 -------------MAFLAILSACNHAGLVEEAQTIFTQAGKYHMPVTLEHYACYINLLGR 501
Query: 240 CGCLINASNVFYNMKER-DVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDD 293
G + +A V NM + WSSL+SA HG A + + E+ K PD+
Sbjct: 502 FGKIDDAFEVTINMPMKPSARIWSSLLSACETHGRLDVAGKIIAN-ELMKSEPDN 555
>AT2G03380.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:1028292-1030361 FORWARD
Length = 689
Score = 207 bits (528), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 127/431 (29%), Positives = 217/431 (50%), Gaps = 44/431 (10%)
Query: 8 NQLRIMSYSSNYLRLISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSL--VL 65
N R+ + S ++ L+ WT + + G +AL +F ++ + + P +++ VL
Sbjct: 295 NARRVFNEHS-HVDLVMWTAMIVGYTHNGSVNEALSLFQKMK---GVEIKPNCVTIASVL 350
Query: 66 KSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVV 125
C I +LG ++H SIK+G + + VA ALV MY KC
Sbjct: 351 SGCGLIENLELGRSVHGLSIKVG-IWDTNVANALVHMYAKCYQN---------------- 393
Query: 126 VWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSA-KAIAFYWRMR 184
DA Y+F+ M D +N+II+G +++GS +A+ + RM
Sbjct: 394 ---------------RDAKYVFE-MESEKDIVAWNSIISGF--SQNGSIHEALFLFHRMN 435
Query: 185 ELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSG--LVEAYGRCGC 242
S+ PN +T+ +L AC + SL + +H S++ + G L++ Y +CG
Sbjct: 436 SESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGD 495
Query: 243 LINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKA 302
+A +F ++E++ + WS++I Y G+ +LE F M + P++ TF ++L A
Sbjct: 496 PQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSA 555
Query: 303 CSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVK 362
C H G+ ++ YF+ M +DY PS+ HY+C+VD+L+RAG L +A DII MP++ V+
Sbjct: 556 CGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVR 615
Query: 363 AWGALLGACRTYGEVELAEIAGRALFEIEPDNPANYVLLARIYASMGRHGEAXXXXXXXX 422
+GA L C + +L EI + + ++ PD+ + YVL++ +YAS GR +A
Sbjct: 616 CFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWNQAKEVRNLMK 675
Query: 423 XXGVKVAPGGS 433
G+ G S
Sbjct: 676 QRGLSKIAGHS 686
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 101/394 (25%), Positives = 177/394 (44%), Gaps = 43/394 (10%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
++ WT + +VK ++ LV+FN ++ + L + Y ++ +C+ + G H
Sbjct: 207 VVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLG-NEYTYGTLIMACTKLSALHQGKWFH 265
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVS 141
+K G + + +L+DMY KC +AR++F+E ++V+W AMI YTH+ V+
Sbjct: 266 GCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVN 325
Query: 142 DALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRA 201
+AL +F +M+ + +KPN +T+ ++L
Sbjct: 326 EALSLFQ---------------------------------KMKGVEIKPNCVTIASVLSG 352
Query: 202 CVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAW 261
C + +L + + +HG SI+ I + + LV Y +C +A VF E+D+VAW
Sbjct: 353 CGLIENLELGRSVHGLSIKVGI-WDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAW 411
Query: 262 SSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQ 321
+S+IS ++ +G AL FH M V P+ +T ++ AC+ G A +
Sbjct: 412 NSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVK 471
Query: 322 DYGLQPSSDHY-SCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVELA 380
L SS H + L+D ++ G A I + K T+ W A++G G+
Sbjct: 472 LGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTI-TWSAMIGGYGKQGDT--- 527
Query: 381 EIAGRALFE--IEPDNPANYVLLARIYASMGRHG 412
I LFE ++ N I ++ G G
Sbjct: 528 -IGSLELFEEMLKKQQKPNESTFTSILSACGHTG 560
Score = 118 bits (296), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 116/247 (46%), Gaps = 34/247 (13%)
Query: 57 DPYVLSLVLKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLF 116
D V S LK+C+ + G IH +K+ N V L+DMY KC SA K+F
Sbjct: 141 DDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDN-VVLTGLLDMYAKCGEIKSAHKVF 199
Query: 117 DEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKA 176
++I RNVV W +MI+ Y ++ + L +F+
Sbjct: 200 NDITLRNVVCWTSMIAGYVKNDLCEEGLVLFN---------------------------- 231
Query: 177 IAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEA 236
RMRE ++ N T L+ AC ++++L+ K HGC +++ I+ L + L++
Sbjct: 232 -----RMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDM 286
Query: 237 YGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITF 296
Y +CG + NA VF D+V W+++I Y +G AL F M+ ++ P+ +T
Sbjct: 287 YVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTI 346
Query: 297 LAVLKAC 303
+VL C
Sbjct: 347 ASVLSGC 353
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 78/349 (22%), Positives = 144/349 (41%), Gaps = 45/349 (12%)
Query: 63 LVLKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQR 122
L+L C+ I + + + + MG +S +A LV +YG T AR +FD+IP+
Sbjct: 49 LLLSKCTNIDSLRQSHGVLTGNGLMGDIS---IATKLVSLYGFFGYTKDARLVFDQIPEP 105
Query: 123 NVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWR 182
+ +W M+ Y C++ S + + Y
Sbjct: 106 DFYLWKVMLRCY----CLNKE-----------------------------SVEVVKLYDL 132
Query: 183 MRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGC 242
+ + + + I L+AC + L+ K+IH C + + +GL++ Y +CG
Sbjct: 133 LMKHGFRYDDIVFSKALKACTELQDLDNGKKIH-CQLVKVPSFDNVVLTGLLDMYAKCGE 191
Query: 243 LINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKA 302
+ +A VF ++ R+VV W+S+I+ Y + L F+ M VL ++ T+ ++ A
Sbjct: 192 IKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMA 251
Query: 303 CSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVK 362
C+ +F G++ SS + L+D+ + G + A + V +
Sbjct: 252 CTKLSALHQG-KWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHS-HVDLV 309
Query: 363 AWGALLGACRTYGEVE--LAEIAGRALFEIEPDNPANYVLLARIYASMG 409
W A++ G V L+ EI+P N V +A + + G
Sbjct: 310 MWTAMIVGYTHNGSVNEALSLFQKMKGVEIKP----NCVTIASVLSGCG 354
>AT1G09220.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:2977952-2978968 REVERSE
Length = 338
Score = 207 bits (528), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 120/336 (35%), Positives = 183/336 (54%), Gaps = 11/336 (3%)
Query: 108 STFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDAS--TFNAIIAG 165
+ A K+FDE+P+RN V WN MI+ T+ AL + M P+ + ++ II G
Sbjct: 7 NMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKM---PNRTVVSWTTIIDG 63
Query: 166 LAGTEDGSAKAIAFYWRMREL-SLKPNLITLLALLRACVRMTSLNMIKEIHG-CSIRNHI 223
A D +AI + RM ++KPN IT+LA+L A + L M +H R +
Sbjct: 64 YARV-DKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGSVHAYVGKRGFV 122
Query: 224 DPHPQLRSGLVEAYGRCGCLINASNVFYNMK--ERDVVAWSSLISAYALHGEARSALETF 281
++ + L++AY +CGC+ +A F + +++V+W+++ISA+A+HG + A+ F
Sbjct: 123 PCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMF 182
Query: 282 HHMEMAKVLPDDITFLAVLKACSHAGLADDA-LDYFARMQQDYGLQPSSDHYSCLVDVLS 340
ME + P+ +T ++VL ACSH GLA++ L++F M +Y + P HY CLVD+L
Sbjct: 183 KDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKITPDVKHYGCLVDMLR 242
Query: 341 RAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVELAEIAGRALFEIEPDNPANYVL 400
R GRL EA I +P++ W LLGAC Y + ELAE R L E+E + +YVL
Sbjct: 243 RKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELAERVTRKLMELERSHGGDYVL 302
Query: 401 LARIYASMGRHGEAXXXXXXXXXXGVKVAPGGSWVT 436
++ I+ GR +A GV PG S VT
Sbjct: 303 MSNIFCGTGRFLDAQRFRKQMDVRGVAKLPGHSQVT 338
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 114/262 (43%), Gaps = 39/262 (14%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
++SWT ++ + + ++A+++F+ + A+ + + +L + + ++ ++H
Sbjct: 54 VVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGSVH 113
Query: 82 SHSIKMGFLS-NPFVACALVDMYGKCVSTFSARKLFDEIP--QRNVVVWNAMISLYTHSN 138
++ K GF+ + V +L+D Y KC SA K F EIP ++N+V W MIS +
Sbjct: 114 AYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFA--- 170
Query: 139 CVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLAL 198
I G+ +A++ + M L LKPN +T++++
Sbjct: 171 ------------------------IHGMG------KEAVSMFKDMERLGLKPNRVTMISV 200
Query: 199 LRACVR--MTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMK-E 255
L AC + ++ + I P + LV+ R G L A + + E
Sbjct: 201 LNACSHGGLAEEEFLEFFNTMVNEYKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIE 260
Query: 256 RDVVAWSSLISAYALHGEARSA 277
V W L+ A +++ +A A
Sbjct: 261 EKAVVWRMLLGACSVYDDAELA 282
>AT5G09950.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3102877-3105864 REVERSE
Length = 995
Score = 207 bits (528), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 124/366 (33%), Positives = 177/366 (48%), Gaps = 37/366 (10%)
Query: 75 QLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQR-NVVVWNAMISL 133
+LG IH ++K AL+ YGKC K+F + +R + V WN+MIS
Sbjct: 534 ELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISG 593
Query: 134 YTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLI 193
Y H+ + AKA+ W M + + +
Sbjct: 594 YIHNELL---------------------------------AKALDLVWFMLQTGQRLDSF 620
Query: 194 TLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNM 253
+L A + +L E+H CS+R ++ + S LV+ Y +CG L A F M
Sbjct: 621 MYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTM 680
Query: 254 KERDVVAWSSLISAYALHGEARSALETFHHMEM-AKVLPDDITFLAVLKACSHAGLADDA 312
R+ +W+S+IS YA HG+ AL+ F M++ + PD +TF+ VL ACSHAGL ++
Sbjct: 681 PVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEG 740
Query: 313 LDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGA-C 371
+F M YGL P +H+SC+ DVL RAG L + D I MP+K V W +LGA C
Sbjct: 741 FKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACC 800
Query: 372 RTYG-EVELAEIAGRALFEIEPDNPANYVLLARIYASMGRHGEAXXXXXXXXXXGVKVAP 430
R G + EL + A LF++EP+N NYVLL +YA+ GR + VK
Sbjct: 801 RANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEA 860
Query: 431 GGSWVT 436
G SWVT
Sbjct: 861 GYSWVT 866
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 94/396 (23%), Positives = 172/396 (43%), Gaps = 47/396 (11%)
Query: 23 ISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLV--LKSCSAIHRSQLGAAI 80
+SW + + G +A+ + ++ L P +L+ L SC+++ ++LG I
Sbjct: 381 VSWNSMITGLDQNGCFIEAVERYKSMRRHDIL---PGSFTLISSLSSCASLKWAKLGQQI 437
Query: 81 HSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCV 140
H S+K+G +D+ NV V NA+++LY + +
Sbjct: 438 HGESLKLG-----------IDL--------------------NVSVSNALMTLYAETGYL 466
Query: 141 SDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLR 200
++ +F +M D ++N+II LA +E +A+ + + K N IT ++L
Sbjct: 467 NECRKIFSSMP-EHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLS 525
Query: 201 ACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKE-RDVV 259
A ++ + K+IHG +++N+I + L+ YG+CG + +F M E RD V
Sbjct: 526 AVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNV 585
Query: 260 AWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARM 319
W+S+IS Y + AL+ M D + VL A + + ++ A
Sbjct: 586 TWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHA-C 644
Query: 320 QQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVEL 379
L+ S LVD+ S+ GRL A MPV+ + +W +++ +G+ E
Sbjct: 645 SVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSY-SWNSMISGYARHGQGEE 703
Query: 380 AEIAGRALFE---IEPDNPANYVLLARIYASMGRHG 412
A LFE ++ P ++V + ++ G
Sbjct: 704 A----LKLFETMKLDGQTPPDHVTFVGVLSACSHAG 735
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 86/356 (24%), Positives = 149/356 (41%), Gaps = 45/356 (12%)
Query: 23 ISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRS-QLGAAIH 81
+SW ++ + + G + A +F+ +Q + + SLV +CS +L I
Sbjct: 172 VSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIM 231
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVS 141
K G L++ FV LV + K S ARK+F+++ RN V N ++
Sbjct: 232 CTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGE 291
Query: 142 DALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRA 201
+A +F M+ D S + +I + E Y E+ LK
Sbjct: 292 EATKLFMDMNSMIDVSPESYVILLSSFPE---------YSLAEEVGLKKG---------- 332
Query: 202 CVRMTSLNMIKEIHGCSIRNH-IDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVA 260
+E+HG I +D + +GLV Y +CG + +A VFY M ++D V+
Sbjct: 333 ----------REVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVS 382
Query: 261 WSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQ 320
W+S+I+ +G A+E + M +LP T ++ L +C+ +L + Q
Sbjct: 383 WNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCA-------SLKWAKLGQ 435
Query: 321 Q------DYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGA 370
Q G+ + + L+ + + G L E I MP V +W +++GA
Sbjct: 436 QIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQV-SWNSIIGA 490
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 105/241 (43%), Gaps = 37/241 (15%)
Query: 33 VKQGFHQQALVVFNHIQTSLALSLDPYVL---SLVLKSCSAIHRSQLGAAIHSHSIKMGF 89
V+Q + ++A +F + + + +S + YV+ S S + + G +H H I G
Sbjct: 285 VRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGL 344
Query: 90 LSNPF-VACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSDALYMFD 148
+ + LV+MY KC S AR++F + ++ V WN+MI+ + C
Sbjct: 345 VDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCF-------- 396
Query: 149 AMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRACVRMTSL 208
+A+ Y MR + P TL++ L +C +
Sbjct: 397 -------------------------IEAVERYKSMRRHDILPGSFTLISSLSSCASLKWA 431
Query: 209 NMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWSSLISAY 268
+ ++IHG S++ ID + + + L+ Y G L +F +M E D V+W+S+I A
Sbjct: 432 KLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGAL 491
Query: 269 A 269
A
Sbjct: 492 A 492
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 137/319 (42%), Gaps = 44/319 (13%)
Query: 65 LKSCSAIHRSQLGAA--IHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQR 122
++SC HR GAA HS K + ++ L++ Y + + SARK+FDE+P R
Sbjct: 10 VQSCVG-HR---GAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLR 65
Query: 123 NVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWR 182
N V W ++S Y+ + H +A+ F
Sbjct: 66 NCVSWACIVSGYSR-----------NGEH----------------------KEALVFLRD 92
Query: 183 MRELSLKPNLITLLALLRACVRMTSLNMI--KEIHGCSIRNHIDPHPQLRSGLVEAYGRC 240
M + + N +++LRAC + S+ ++ ++IHG + + + L+ Y +C
Sbjct: 93 MVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKC 152
Query: 241 -GCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLA- 298
G + A F +++ ++ V+W+S+IS Y+ G+ RSA F M+ P + TF +
Sbjct: 153 IGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSL 212
Query: 299 VLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVK 358
V ACS L+ Q GL S LV +++G L A + M +
Sbjct: 213 VTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETR 272
Query: 359 VTVKAWGALLGACR-TYGE 376
V G ++G R +GE
Sbjct: 273 NAVTLNGLMVGLVRQKWGE 291
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 114/280 (40%), Gaps = 38/280 (13%)
Query: 23 ISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQL--GAAI 80
+SW ++ + + G H++ALV + S + Y VL++C I + G I
Sbjct: 68 VSWACIVSGYSRNGEHKEALVFLRDMVKEGIFS-NQYAFVSVLRACQEIGSVGILFGRQI 126
Query: 81 HSHSIKMGFLSNPFVACALVDMYGKCVSTFS-ARKLFDEIPQRNVVVWNAMISLYTHSNC 139
H K+ + + V+ L+ MY KC+ + A F +I +N V WN++IS+Y+ +
Sbjct: 127 HGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGD 186
Query: 140 VSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALL 199
A +F +M DGS R E + + T +L
Sbjct: 187 QRSAFRIFSSMQY------------------DGS--------RPTEYTFGSLVTTACSLT 220
Query: 200 RACVRMTSLNMIKEIHGCSI-RNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDV 258
VR+ M C+I ++ + + SGLV A+ + G L A VF M+ R+
Sbjct: 221 EPDVRLLEQIM------CTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNA 274
Query: 259 VAWSSLISAYALHGEARSALETFHHME-MAKVLPDDITFL 297
V + L+ A + F M M V P+ L
Sbjct: 275 VTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVIL 314
>AT3G09040.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:2761195-2764281 REVERSE
Length = 1028
Score = 207 bits (527), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 129/402 (32%), Positives = 195/402 (48%), Gaps = 41/402 (10%)
Query: 39 QQALVVFNHIQTSLALSLDPYVLSL--VLKSCSAIHRSQLGAAIHSHSIKMGFLSN-PFV 95
++A+V+F Q L ++P ++ ++++C LG H K GF S ++
Sbjct: 611 EEAVVLF---QEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYL 667
Query: 96 ACALVDMYGKCVSTFSARKLFDEIPQ-RNVVVWNAMISLYTHSNCVSDALYMFDAMHVAP 154
+L+ MY A LF E+ +++V+W M+S ++ + +AL
Sbjct: 668 GISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEAL---------- 717
Query: 155 DASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEI 214
FY MR + P+ T + +LR C ++SL + I
Sbjct: 718 -----------------------KFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAI 754
Query: 215 HGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKER-DVVAWSSLISAYALHGE 273
H D + L++ Y +CG + +S VF M+ R +VV+W+SLI+ YA +G
Sbjct: 755 HSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGY 814
Query: 274 ARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYS 333
A AL+ F M + ++PD+ITFL VL ACSHAG D F M YG++ DH +
Sbjct: 815 AEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVA 874
Query: 334 CLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVELAEIAGRALFEIEPD 393
C+VD+L R G L EA D I +K + W +LLGACR +G+ EI+ L E+EP
Sbjct: 875 CMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQ 934
Query: 394 NPANYVLLARIYASMGRHGEAXXXXXXXXXXGVKVAPGGSWV 435
N + YVLL+ IYAS G +A GVK PG SW+
Sbjct: 935 NSSAYVLLSNIYASQGCWEKANALRKVMRDRGVKKVPGYSWI 976
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 87/353 (24%), Positives = 151/353 (42%), Gaps = 37/353 (10%)
Query: 5 AKLNQLRIMSYSSNYLRLISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLV 64
KL R++ + +++W ++ H K+G A+ F +++ S S L V
Sbjct: 275 GKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRS-TLGSV 333
Query: 65 LKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNV 124
L + + LG +H+ +IK+G SN +V +LV MY KC +A K+F+ + ++N
Sbjct: 334 LSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKND 393
Query: 125 VVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMR 184
V WNAMI Y H+ S K + + M+
Sbjct: 394 VFWNAMIRGYAHNG---------------------------------ESHKVMELFMDMK 420
Query: 185 ELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLI 244
+ T +LL C L M + H I+ + + + + LV+ Y +CG L
Sbjct: 421 SSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALE 480
Query: 245 NASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACS 304
+A +F M +RD V W+++I +Y A + F M + ++ D + LKAC+
Sbjct: 481 DARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACT 540
Query: 305 HA-GLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMP 356
H GL + ++ GL S L+D+ S+ G + +A + +P
Sbjct: 541 HVHGLYQGKQVHCLSVK--CGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLP 591
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 159/348 (45%), Gaps = 37/348 (10%)
Query: 57 DPYVLSLVLKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLF 116
+ + S+VL +C+ + G IH IKMG N + ALVDMY KC AR++F
Sbjct: 159 NKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVF 218
Query: 117 DEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAM--------HVA--------------- 153
+ I N V W + S Y + +A+ +F+ M H+A
Sbjct: 219 EWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLK 278
Query: 154 -----------PDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRAC 202
PD +N +I+G G AI +++ MR+ S+K TL ++L A
Sbjct: 279 DARLLFGEMSSPDVVAWNVMISG-HGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAI 337
Query: 203 VRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWS 262
+ +L++ +H +I+ + + + S LV Y +C + A+ VF ++E++ V W+
Sbjct: 338 GIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWN 397
Query: 263 SLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQD 322
++I YA +GE+ +E F M+ + DD TF ++L C+ A + F +
Sbjct: 398 AMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCA-ASHDLEMGSQFHSIIIK 456
Query: 323 YGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGA 370
L + + LVD+ ++ G L +A I M + V W ++G+
Sbjct: 457 KKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNV-TWNTIIGS 503
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 128/281 (45%), Gaps = 35/281 (12%)
Query: 23 ISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIHS 82
+ W + + G + + +F +++S ++D + + +L +C+A H ++G+ HS
Sbjct: 394 VFWNAMIRGYAHNGESHKVMELFMDMKSS-GYNIDDFTFTSLLSTCAASHDLEMGSQFHS 452
Query: 83 HSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSD 142
IK N FV ALVDMY KC + AR++F+ + R+ V WN +I Y
Sbjct: 453 IIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQ------ 506
Query: 143 ALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRAC 202
++ ++A + RM + + L + L+AC
Sbjct: 507 ---------------------------DENESEAFDLFKRMNLCGIVSDGACLASTLKAC 539
Query: 203 VRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWS 262
+ L K++H S++ +D S L++ Y +CG + +A VF ++ E VV+ +
Sbjct: 540 THVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMN 599
Query: 263 SLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKAC 303
+LI+ Y+ A+ F M V P +ITF +++AC
Sbjct: 600 ALIAGYS-QNNLEEAVVLFQEMLTRGVNPSEITFATIVEAC 639
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 84/365 (23%), Positives = 152/365 (41%), Gaps = 48/365 (13%)
Query: 23 ISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIHS 82
++W + S+V+ +A +F + +S D L+ LK+C+ +H G +H
Sbjct: 495 VTWNTIIGSYVQDENESEAFDLFKRMNLCGIVS-DGACLASTLKACTHVHGLYQGKQVHC 553
Query: 83 HSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSD 142
S+K G + +L+DMY KC ARK+F +P+ +VV NA+I+ Y+ +N
Sbjct: 554 LSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNL--- 610
Query: 143 ALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRAC 202
+A+ + M + P+ IT ++ AC
Sbjct: 611 -------------------------------EEAVVLFQEMLTRGVNPSEITFATIVEAC 639
Query: 203 VRMTSLNMIKEIHG-CSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKE-RDVVA 260
+ SL + + HG + R L L+ Y + A +F + + +V
Sbjct: 640 HKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVL 699
Query: 261 WSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACS-----HAGLADDALDY 315
W+ ++S ++ +G AL+ + M VLPD TF+ VL+ CS G A +L +
Sbjct: 700 WTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIF 759
Query: 316 FARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYG 375
+ D S + L+D+ ++ G + + + M + V +W +L+ G
Sbjct: 760 --HLAHDLDELTS----NTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNG 813
Query: 376 EVELA 380
E A
Sbjct: 814 YAEDA 818
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 115/256 (44%), Gaps = 39/256 (15%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
++ WT ++ H + GF+++AL + ++ L D VL+ CS + + G AIH
Sbjct: 697 IVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLP-DQATFVTVLRVCSVLSSLREGRAIH 755
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQR-NVVVWNAMISLYTHSNCV 140
S + + + L+DMY KC + ++FDE+ +R NVV WN++I+ Y +
Sbjct: 756 SLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYA 815
Query: 141 SDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLR 200
DAL +FD+M R+ + P+ IT L +L
Sbjct: 816 EDALKIFDSM---------------------------------RQSHIMPDEITFLGVLT 842
Query: 201 ACVRMTSLNMIKEIHGCSIRNH-IDPHPQLRSGLVEAYGRCGCLINASNVF--YNMKERD 257
AC ++ ++I I + I+ + +V+ GR G L A + N+K D
Sbjct: 843 ACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKP-D 901
Query: 258 VVAWSSLISAYALHGE 273
WSSL+ A +HG+
Sbjct: 902 ARLWSSLLGACRIHGD 917
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 103/245 (42%), Gaps = 34/245 (13%)
Query: 75 QLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLY 134
++G A+HS S+ +G S + A+VD+Y KC A K FD + +++V WN+M+S+Y
Sbjct: 77 RIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLSMY 135
Query: 135 THSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLIT 194
+ G G K + + + E + PN T
Sbjct: 136 SS---------------------------IGKPG------KVLRSFVSLFENQIFPNKFT 162
Query: 195 LLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMK 254
+L C R T++ ++IH I+ ++ + LV+ Y +C + +A VF +
Sbjct: 163 FSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIV 222
Query: 255 ERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALD 314
+ + V W+ L S Y G A+ F M PD + F+ V+ G DA
Sbjct: 223 DPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARL 282
Query: 315 YFARM 319
F M
Sbjct: 283 LFGEM 287
>AT1G06145.1 | Symbols: EMB1444 | EMB1444 (EMBRYO DEFECTIVE 1444) |
chr1:1867129-1868862 REVERSE
Length = 577
Score = 207 bits (527), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 126/415 (30%), Positives = 207/415 (49%), Gaps = 36/415 (8%)
Query: 53 ALSLDPYVLSLVLKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSA 112
++S Y S ++K+ S S+ G ++ +H K GF + + L+D Y A
Sbjct: 121 SVSPSSYTYSSLVKASS--FASRFGESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREA 178
Query: 113 RKLFDEIPQRNVVVWNAMISLYTH---------------------SNCV----------S 141
RK+FDE+P+R+ + W M+S Y SNC+
Sbjct: 179 RKVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCLINGYMGLGNLE 238
Query: 142 DALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRA 201
A +F+ M V D ++ +I G + + +AIA +++M E + P+ +T+ ++ A
Sbjct: 239 QAESLFNQMPV-KDIISWTTMIKGYSQNKR-YREAIAVFYKMMEEGIIPDEVTMSTVISA 296
Query: 202 CVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAW 261
C + L + KE+H +++N + S LV+ Y +CG L A VF+N+ ++++ W
Sbjct: 297 CAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCW 356
Query: 262 SSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQ 321
+S+I A HG A+ AL+ F MEM V P+ +TF++V AC+HAGL D+ + M
Sbjct: 357 NSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMID 416
Query: 322 DYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVELAE 381
DY + + +HY +V + S+AG +YEA ++I M + WGALL CR + + +AE
Sbjct: 417 DYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRIHKNLVIAE 476
Query: 382 IAGRALFEIEPDNPANYVLLARIYASMGRHGEAXXXXXXXXXXGV-KVAPGGSWV 435
IA L +EP N Y LL +YA R + G+ K+ PG S +
Sbjct: 477 IAFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEKICPGTSSI 531
>AT1G04840.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:1362867-1364962 REVERSE
Length = 665
Score = 206 bits (524), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 121/392 (30%), Positives = 202/392 (51%), Gaps = 35/392 (8%)
Query: 52 LALSLDPYVLSLVLKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFS 111
L + D VLKS S + LG A+H+ ++K + FV +LVDMY K
Sbjct: 120 LGVKPDRLTFPFVLKSNSKLGFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKH 179
Query: 112 ARKLFDEIPQR----NVVVWNAMISLYTHSNCVSDALYMFDAM----------------- 150
A ++F+E P R ++++WN +I+ Y + + A +F +M
Sbjct: 180 AFQVFEESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVD 239
Query: 151 -----------HVAPDAS--TFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLA 197
+ P+ + ++ +I G + T D AI+ Y+ M E LKPN T+ A
Sbjct: 240 SGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYET-AISTYFEMLEKGLKPNEYTIAA 298
Query: 198 LLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERD 257
+L AC + +L IHG + N I + + LV+ Y +CG L A+ VF NM +D
Sbjct: 299 VLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKD 358
Query: 258 VVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFA 317
+++W+++I +A+HG A++ F M + PD++ FLAVL AC ++ D L++F
Sbjct: 359 ILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFD 418
Query: 318 RMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEV 377
M+ DY ++P+ HY +VD+L RAG+L EA++++ MP+ + W AL AC+ +
Sbjct: 419 SMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTTWAALYRACKAHKGY 478
Query: 378 ELAEIAGRALFEIEPDNPANYVLLARIYASMG 409
AE + L E++P+ +Y+ L + +AS G
Sbjct: 479 RRAESVSQNLLELDPELCGSYIFLDKTHASKG 510
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 102/258 (39%), Gaps = 36/258 (13%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
++SWT +N + G ++ A+ + + L + Y ++ VL +CS G IH
Sbjct: 258 VVSWTTLINGFSQTGDYETAISTYFEMLEK-GLKPNEYTIAAVLSACSKSGALGSGIRIH 316
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVS 141
+ + G + + ALVDMY KC A +F + ++++ W AMI +
Sbjct: 317 GYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFH 376
Query: 142 DALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRA 201
A+ F M + + KP+ + LA+L A
Sbjct: 377 QAIQCFRQMMYSGE---------------------------------KPDEVVFLAVLTA 403
Query: 202 CVRMTSLNM-IKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMK-ERDVV 259
C+ + +++ + + I+P + +V+ GR G L A + NM D+
Sbjct: 404 CLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLT 463
Query: 260 AWSSLISAYALHGEARSA 277
W++L A H R A
Sbjct: 464 TWAALYRACKAHKGYRRA 481
>AT4G18840.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:10338719-10340356 REVERSE
Length = 545
Score = 206 bits (524), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 128/403 (31%), Positives = 204/403 (50%), Gaps = 33/403 (8%)
Query: 39 QQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACA 98
+ AL VF + D Y + VLK+C+A + G IH IK G +++ FV
Sbjct: 122 EVALTVFREMLLGPVFP-DKYSFTFVLKACAAFCGFEEGRQIHGLFIKSGLVTDVFVENT 180
Query: 99 LVDMYGKC------------------------VSTF-------SARKLFDEIPQRNVVVW 127
LV++YG+ +S + AR LFDE+ +RNV W
Sbjct: 181 LVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFDEMEERNVESW 240
Query: 128 NAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELS 187
N MIS Y + V +A +FD+M V D ++NA++ A + F + + +
Sbjct: 241 NFMISGYAAAGLVKEAKEVFDSMPVR-DVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDST 299
Query: 188 LKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINAS 247
KP+ TL+++L AC + SL+ + +H ++ I+ L + LV+ Y +CG + A
Sbjct: 300 EKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKAL 359
Query: 248 NVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAG 307
VF +RDV W+S+IS ++HG + ALE F M P+ ITF+ VL AC+H G
Sbjct: 360 EVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVG 419
Query: 308 LADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGAL 367
+ D A F M Y ++P+ +HY C+VD+L R G++ EA +++ +P +L
Sbjct: 420 MLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPADEASILLESL 479
Query: 368 LGACRTYGEVELAEIAGRALFEIEPDNPANYVLLARIYASMGR 410
LGAC+ +G++E AE L E+ + + Y ++ +YAS GR
Sbjct: 480 LGACKRFGQLEQAERIANRLLELNLRDSSGYAQMSNLYASDGR 522
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 95/229 (41%), Gaps = 34/229 (14%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
++SW + ++ G + + L VFN + D + L VL +C+++ G +H
Sbjct: 268 VVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVH 327
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVS 141
+ K G F+A ALVDMY KC A ++F +R+V WN++IS +
Sbjct: 328 VYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGK 387
Query: 142 DALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRA 201
DAL +F M + G KPN IT + +L A
Sbjct: 388 DALEIFSEM-----------VYEG----------------------FKPNGITFIGVLSA 414
Query: 202 CVRMTSLNMIKEI-HGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNV 249
C + L+ +++ S ++P + +V+ GR G + A +
Sbjct: 415 CNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEEL 463
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 76/160 (47%), Gaps = 19/160 (11%)
Query: 262 SSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQ 321
+S+I AYA AL F M + V PD +F VLKAC+ A F +Q
Sbjct: 109 NSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACA-------AFCGFEEGRQ 161
Query: 322 DYGLQPSS----DHY--SCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYG 375
+GL S D + + LV+V R+G A ++ MPV+ V +W +LL A G
Sbjct: 162 IHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAV-SWNSLLSAYLEKG 220
Query: 376 EVELAEIAGRALF-EIEPDNPANYVLLARIYASMGRHGEA 414
V+ A RALF E+E N ++ + YA+ G EA
Sbjct: 221 LVDEA----RALFDEMEERNVESWNFMISGYAAAGLVKEA 256
>AT3G26782.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED IN:
seed; EXPRESSED DURING: E expanded cotyledon stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT3G23330.1); Has 13812 Blast hits to 4961
proteins in 140 species: Archae - 0; Bacteria - 2;
Metazoa - 58; Fungi - 30; Plants - 13522; Viruses - 0;
Other Eukaryotes - 200 (source: NCBI BLink). |
chr3:9850594-9852682 FORWARD
Length = 659
Score = 206 bits (524), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 136/419 (32%), Positives = 208/419 (49%), Gaps = 39/419 (9%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHI-----QTSLALSLDPYVLSLVLKSCSAIHRSQL 76
++SWT + + G A+ +F + A+ LD L V+ +CS + L
Sbjct: 142 IVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGL 201
Query: 77 GAAIHSHSIKMGFLSNPFVACALVDMYGKCVS--TFSARKLFDEIPQRNVVVWNAMISLY 134
+IHS IK GF V L+D Y K ARK+FD+I ++ V +N+++S+Y
Sbjct: 202 TESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVY 261
Query: 135 THSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLIT 194
S ++A +F + V TFNAI T
Sbjct: 262 AQSGMSNEAFEVFRRL-VKNKVVTFNAI-------------------------------T 289
Query: 195 LLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMK 254
L +L A +L + K IH IR ++ + + +++ Y +CG + A F MK
Sbjct: 290 LSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMK 349
Query: 255 ERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALD 314
++V +W+++I+ Y +HG A ALE F M + V P+ ITF++VL ACSHAGL +
Sbjct: 350 NKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWR 409
Query: 315 YFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTY 374
+F M+ +G++P +HY C+VD+L RAG L +AYD+I+ M +K W +LL ACR +
Sbjct: 410 WFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIH 469
Query: 375 GEVELAEIAGRALFEIEPDNPANYVLLARIYASMGRHGEAXXXXXXXXXXGVKVAPGGS 433
VELAEI+ LFE++ N Y+LL+ IYA GR + G+ PG S
Sbjct: 470 KNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFS 528
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 96/362 (26%), Positives = 167/362 (46%), Gaps = 43/362 (11%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSL--VLKSCSAIHRSQLGAA 79
+ SW + + G +AL+ F+ ++ LSL P S +K+CS++ G
Sbjct: 41 VFSWNSVIADLARSGDSAEALLAFSSMRK---LSLYPTRSSFPCAIKACSSLFDIFSGKQ 97
Query: 80 IHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNC 139
H + G+ S+ FV+ AL+ MY C ARK+FDEIP+RN+V W +MI Y +
Sbjct: 98 THQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGN 157
Query: 140 VSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALL 199
DA+ +F + V + +D A + + + L++++
Sbjct: 158 ALDAVSLFKDLLVDEN--------------DDDDAMFL-------------DSMGLVSVI 190
Query: 200 RACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAY--GRCGCLINASNVFYNMKERD 257
AC R+ + + + IH I+ D + + L++AY G G + A +F + ++D
Sbjct: 191 SACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKD 250
Query: 258 VVAWSSLISAYALHGEARSALETFHHMEMAKVLP-DDITFLAVLKACSHAG---LADDAL 313
V+++S++S YA G + A E F + KV+ + IT VL A SH+G +
Sbjct: 251 RVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIH 310
Query: 314 DYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRT 373
D RM GL+ + ++D+ + GR+ A M K V++W A++
Sbjct: 311 DQVIRM----GLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNK-NVRSWTAMIAGYGM 365
Query: 374 YG 375
+G
Sbjct: 366 HG 367
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 99/207 (47%), Gaps = 14/207 (6%)
Query: 146 MFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRACVRM 205
+F+ D ++N++IA LA + D SA+A+ + MR+LSL P + ++AC +
Sbjct: 31 LFNRYVDKTDVFSWNSVIADLARSGD-SAEALLAFSSMRKLSLYPTRSSFPCAIKACSSL 89
Query: 206 TSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWSSLI 265
+ K+ H + + S L+ Y CG L +A VF + +R++V+W+S+I
Sbjct: 90 FDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMI 149
Query: 266 SAYALHGEARSALETFHHMEMAKVLPDDITFL------AVLKACSHA---GLADDALDYF 316
Y L+G A A+ F + + + DD FL +V+ ACS GL + +
Sbjct: 150 RGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFV 209
Query: 317 ARMQQDYGLQPSSDHYSCLVDVLSRAG 343
+ D G+ + L+D ++ G
Sbjct: 210 IKRGFDRGVSVG----NTLLDAYAKGG 232
>AT5G50390.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:20520789-20522980 REVERSE
Length = 701
Score = 206 bits (523), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 118/416 (28%), Positives = 208/416 (50%), Gaps = 38/416 (9%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
L S+ ++ V G + +A +F + L+ + + +++L++ + + +G +H
Sbjct: 189 LYSYYSIISGFVNFGNYVEAFELFKMMWEELS-DCETHTFAVMLRASAGLGSIYVGKQLH 247
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVS 141
++K+G + N FV+C L+DMY KC +
Sbjct: 248 VCALKLGVVDNTFVSCGLIDMYSKCGD-------------------------------IE 276
Query: 142 DALYMFDAMHVAPDAST--FNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALL 199
DA F+ M P+ +T +N +IAG A S +A+ + MR+ + + TL ++
Sbjct: 277 DARCAFECM---PEKTTVAWNNVIAGYA-LHGYSEEALCLLYDMRDSGVSIDQFTLSIMI 332
Query: 200 RACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVV 259
R ++ L + K+ H IRN + + LV+ Y + G + A VF + ++++
Sbjct: 333 RISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNII 392
Query: 260 AWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARM 319
+W++L+ YA HG A++ F M A V P+ +TFLAVL AC+++GL++ + F M
Sbjct: 393 SWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSM 452
Query: 320 QQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVEL 379
+ +G++P + HY+C++++L R G L EA IR P+K TV W ALL ACR +EL
Sbjct: 453 SEVHGIKPRAMHYACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNACRMQENLEL 512
Query: 380 AEIAGRALFEIEPDNPANYVLLARIYASMGRHGEAXXXXXXXXXXGVKVAPGGSWV 435
+ L+ + P+ NYV++ +Y SMG+ EA G+ + P +WV
Sbjct: 513 GRVVAEKLYGMGPEKLGNYVVMYNMYNSMGKTAEAAGVLETLESKGLSMMPACTWV 568
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/337 (22%), Positives = 149/337 (44%), Gaps = 35/337 (10%)
Query: 39 QQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACA 98
++A +F ++ + + ++++C + + ++ + GF ++
Sbjct: 104 REAFELFEILEIRCSFKVGVSTYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNR 163
Query: 99 LVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDAST 158
++ M+ KC AR+LFDEIP+RN+ + ++IS + + +A +F M
Sbjct: 164 ILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMM-------- 215
Query: 159 FNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCS 218
W ELS T +LRA + S+ + K++H C+
Sbjct: 216 ----------------------WE--ELS-DCETHTFAVMLRASAGLGSIYVGKQLHVCA 250
Query: 219 IRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSAL 278
++ + + + GL++ Y +CG + +A F M E+ VAW+++I+ YALHG + AL
Sbjct: 251 LKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEAL 310
Query: 279 ETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDV 338
+ M + V D T +++ + + A + ++ G + + LVD
Sbjct: 311 CLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRN-GFESEIVANTALVDF 369
Query: 339 LSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYG 375
S+ GR+ A + +P K + +W AL+G +G
Sbjct: 370 YSKWGRVDTARYVFDKLPRK-NIISWNALMGGYANHG 405
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 94/198 (47%), Gaps = 10/198 (5%)
Query: 187 SLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINA 246
S K + T AL+ AC+R+ S+ +K ++G + N +P + + ++ + +CG +I+A
Sbjct: 118 SFKVGVSTYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDA 177
Query: 247 SNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHA 306
+F + ER++ ++ S+IS + G A E F M + TF +L+A A
Sbjct: 178 RRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRA--SA 235
Query: 307 GLADDALDYFARMQQDYGLQ---PSSDHYSC-LVDVLSRAGRLYEAYDIIRGMPVKVTVK 362
GL Y + L+ + SC L+D+ S+ G + +A MP K TV
Sbjct: 236 GLGS---IYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTV- 291
Query: 363 AWGALLGACRTYGEVELA 380
AW ++ +G E A
Sbjct: 292 AWNNVIAGYALHGYSEEA 309
>AT4G35130.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:16721084-16723498 REVERSE
Length = 804
Score = 206 bits (523), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 118/389 (30%), Positives = 199/389 (51%), Gaps = 37/389 (9%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
+++W + + + G A + F + L D + S+ L SAI G IH
Sbjct: 298 IVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPD-VITSINLLPASAILE---GRTIH 353
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVS 141
++++ GFL + + AL+DMYG+C SA +FD + ++NV+ WN++I+ Y +
Sbjct: 354 GYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNY 413
Query: 142 DALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRA 201
AL +F + W + SL P+ T+ ++L A
Sbjct: 414 SALELFQEL------------------------------W---DSSLVPDSTTIASILPA 440
Query: 202 CVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAW 261
SL+ +EIH +++ + + + LV Y CG L +A F ++ +DVV+W
Sbjct: 441 YAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSW 500
Query: 262 SSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQ 321
+S+I AYA+HG R ++ F M ++V P+ TF ++L ACS +G+ D+ +YF M++
Sbjct: 501 NSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKR 560
Query: 322 DYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVELAE 381
+YG+ P +HY C++D++ R G A + MP T + WG+LL A R + ++ +AE
Sbjct: 561 EYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDITIAE 620
Query: 382 IAGRALFEIEPDNPANYVLLARIYASMGR 410
A +F++E DN YVLL +YA GR
Sbjct: 621 FAAEQIFKMEHDNTGCYVLLLNMYAEAGR 649
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 137/282 (48%), Gaps = 38/282 (13%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
++SW ++ ++ G +L++F + D + L +CS ++ ++G IH
Sbjct: 196 IVSWNSMISGYLALGDGFSSLMLFKEM-LKCGFKPDRFSTMSALGACSHVYSPKMGKEIH 254
Query: 82 SHSIKMGFLS-NPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCV 140
H+++ + + V +++DMY K A ++F+ + QRN+V WN MI Y + V
Sbjct: 255 CHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRV 314
Query: 141 SDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLR 200
+DA F M ++G L+P++IT + LL
Sbjct: 315 TDAFLCFQKM-----------------SEQNG---------------LQPDVITSINLLP 342
Query: 201 ACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVA 260
A + + IHG ++R PH L + L++ YG CG L +A +F M E++V++
Sbjct: 343 ASAILEG----RTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVIS 398
Query: 261 WSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKA 302
W+S+I+AY +G+ SALE F + + ++PD T ++L A
Sbjct: 399 WNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPA 440
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 92/361 (25%), Positives = 163/361 (45%), Gaps = 46/361 (12%)
Query: 25 WTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIHSHS 84
W + G + +A+ ++ + + + D + V+KS + I + G IH+
Sbjct: 98 WNVMIKGFTSCGLYIEAVQFYSRMVFA-GVKADTFTYPFVIKSVAGISSLEEGKKIHAMV 156
Query: 85 IKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSDAL 144
IK+GF+S+ +V +L+ +Y K + A K+F+E+P+R++V WN+MIS
Sbjct: 157 IKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMIS------------ 204
Query: 145 YMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRACVR 204
G DG + + F M + KP+ + ++ L AC
Sbjct: 205 --------------------GYLALGDGFSSLMLFK-EMLKCGFKPDRFSTMSALGACSH 243
Query: 205 MTSLNMIKEIHGCSIRNHIDPHP-QLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWSS 263
+ S M KEIH ++R+ I+ + + +++ Y + G + A +F M +R++VAW+
Sbjct: 244 VYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNV 303
Query: 264 LISAYALHGEARSALETFHHM-EMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQD 322
+I YA +G A F M E + PD IT + +L A A L + +A +
Sbjct: 304 MIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPA--SAILEGRTIHGYAMRR-- 359
Query: 323 YGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGA----CRTYGEVE 378
G P + L+D+ G+L A I M K V +W +++ A + Y +E
Sbjct: 360 -GFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEK-NVISWNSIIAAYVQNGKNYSALE 417
Query: 379 L 379
L
Sbjct: 418 L 418
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 126/272 (46%), Gaps = 24/272 (8%)
Query: 134 YTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDG-SAKAIAFYWRMRELSLKPNL 192
+ S + DAL +FD M+ A DA +N +I G T G +A+ FY RM +K +
Sbjct: 74 FADSRLMEDALQLFDEMNKA-DAFLWNVMIKGF--TSCGLYIEAVQFYSRMVFAGVKADT 130
Query: 193 ITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYN 252
T ++++ ++SL K+IH I+ + + L+ Y + GC +A VF
Sbjct: 131 FTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEE 190
Query: 253 MKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDA 312
M ERD+V+W+S+IS Y G+ S+L F M PD + ++ L ACSH
Sbjct: 191 MPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHV------ 244
Query: 313 LDYFARMQQDYGLQPSSDH--------YSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAW 364
Y +M ++ + ++D+ S+ G + A I GM ++ + AW
Sbjct: 245 --YSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGM-IQRNIVAW 301
Query: 365 GALLGACRTYGEVELAEIAGRALFE---IEPD 393
++G G V A + + + E ++PD
Sbjct: 302 NVMIGCYARNGRVTDAFLCFQKMSEQNGLQPD 333
>AT4G33990.1 | Symbols: EMB2758 | EMB2758 (embryo defective 2758) |
chr4:16290141-16292612 REVERSE
Length = 823
Score = 206 bits (523), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 134/422 (31%), Positives = 215/422 (50%), Gaps = 45/422 (10%)
Query: 19 YLR-LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLG 77
Y+R LISW + ++ +A+ +F ++ S + P L+L+ S ++I SQLG
Sbjct: 309 YVRDLISWNSIIKAYELNEQPLRAISLFQEMRLS---RIQPDCLTLI--SLASI-LSQLG 362
Query: 78 -----AAIHSHSIKMG-FLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMI 131
++ +++ G FL + + A+V MY K SAR +F+ +P +V+ WN +I
Sbjct: 363 DIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTII 422
Query: 132 SLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPN 191
S Y + S+A+ M++ M E+G A N
Sbjct: 423 SGYAQNGFASEAIEMYNIME------------------EEGEIAA--------------N 450
Query: 192 LITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFY 251
T +++L AC + +L ++HG ++N + + + L + YG+CG L +A ++FY
Sbjct: 451 QGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFY 510
Query: 252 NMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADD 311
+ + V W++LI+ + HG A+ F M V PD ITF+ +L ACSH+GL D+
Sbjct: 511 QIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDE 570
Query: 312 ALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGAC 371
F MQ DYG+ PS HY C+VD+ RAG+L A I+ M ++ WGALL AC
Sbjct: 571 GQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSAC 630
Query: 372 RTYGEVELAEIAGRALFEIEPDNPANYVLLARIYASMGRHGEAXXXXXXXXXXGVKVAPG 431
R +G V+L +IA LFE+EP++ +VLL+ +YAS G+ G++ PG
Sbjct: 631 RVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPG 690
Query: 432 GS 433
S
Sbjct: 691 WS 692
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 132/284 (46%), Gaps = 40/284 (14%)
Query: 24 SWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIHSH 83
+W ++ + + G + + F+ S L+ D VLK+C + G IH
Sbjct: 119 AWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---GNKIHCL 175
Query: 84 SIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSDA 143
++K GF+ + +VA +L+ +Y + + +AR LFDE+P R++ WNAMIS Y S +A
Sbjct: 176 ALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEA 235
Query: 144 LYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRACV 203
L + + + A D+ +T+++LL AC
Sbjct: 236 LTLSNGLR-AMDS------------------------------------VTVVSLLSACT 258
Query: 204 RMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWSS 263
N IH SI++ ++ + + L++ Y G L + VF M RD+++W+S
Sbjct: 259 EAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNS 318
Query: 264 LISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAG 307
+I AY L+ + A+ F M ++++ PD +T +++ S G
Sbjct: 319 IIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLG 362
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 135/296 (45%), Gaps = 25/296 (8%)
Query: 122 RNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYW 181
+NV + +++LY + V+ A + FD + D +N +I+G + S F
Sbjct: 84 QNVCISAKLVNLYCYLGNVALARHTFDHIQ-NRDVYAWNLMISGYGRAGNSSEVIRCFSL 142
Query: 182 RMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCG 241
M L P+ T ++L+AC + N +IH +++ + + L+ Y R
Sbjct: 143 FMLSSGLTPDYRTFPSVLKACRTVIDGN---KIHCLALKFGFMWDVYVAASLIHLYSRYK 199
Query: 242 CLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLK 301
+ NA +F M RD+ +W+++IS Y G A+ AL + + D +T +++L
Sbjct: 200 AVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAM----DSVTVVSLLS 255
Query: 302 ACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTV 361
AC+ AG + + + +GL+ + L+D+ + GRL + + M V+ +
Sbjct: 256 ACTEAGDFNRGVTIHS-YSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLI 314
Query: 362 KAWGALLGACRTYGEVELAEIAGRA--LFE------IEPDNPANYVLLARIYASMG 409
+W +++ A EL E RA LF+ I+PD + LA I + +G
Sbjct: 315 -SWNSIIKA------YELNEQPLRAISLFQEMRLSRIQPD-CLTLISLASILSQLG 362
>AT4G15720.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:8949569-8951419 FORWARD
Length = 616
Score = 205 bits (522), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 122/392 (31%), Positives = 200/392 (51%), Gaps = 35/392 (8%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
++SWT ++ + G Q AL +F + + + Y + V K+CSA+ S++G IH
Sbjct: 95 VVSWTSVISGYNDMGKPQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIH 154
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQ--RNVVVWNAMISLYTHSNC 139
+ G N V+ +LVDMYGKC +AR++FD + RNVV W +MI+ Y +
Sbjct: 155 ARLEISGLRRNIVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNAR 214
Query: 140 VSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALL 199
+A+ +F +FNA + S + N L +++
Sbjct: 215 GHEAIELF---------RSFNAALT----------------------SDRANQFMLASVI 243
Query: 200 RACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVV 259
AC + L K HG R + + + + L++ Y +CG L A +F ++ V+
Sbjct: 244 SACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVI 303
Query: 260 AWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARM 319
+++S+I A A HG +A++ F M ++ P+ +T L VL ACSH+GL ++ L+Y + M
Sbjct: 304 SYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLM 363
Query: 320 QQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKA--WGALLGACRTYGEV 377
+ YG+ P S HY+C+VD+L R GR+ EAY++ + + V A WGALL A R +G V
Sbjct: 364 AEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGALLSAGRLHGRV 423
Query: 378 ELAEIAGRALFEIEPDNPANYVLLARIYASMG 409
E+ A + L + + Y+ L+ YA G
Sbjct: 424 EIVSEASKRLIQSNQQVTSAYIALSNAYAVSG 455
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 104/232 (44%), Gaps = 36/232 (15%)
Query: 80 IHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNC 139
+H+ ++K+GF S+ F LV Y K +ARKLFDE+ + NVV W ++IS Y
Sbjct: 51 LHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGK 110
Query: 140 VSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALL 199
+AL MF MH + + PN T ++
Sbjct: 111 PQNALSMFQKMH--------------------------------EDRPVPPNEYTFASVF 138
Query: 200 RACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNM--KERD 257
+AC + + K IH + + + + S LV+ YG+C + A VF +M R+
Sbjct: 139 KACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVETARRVFDSMIGYGRN 198
Query: 258 VVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFL--AVLKACSHAG 307
VV+W+S+I+AYA + A+E F A F+ +V+ ACS G
Sbjct: 199 VVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLASVISACSSLG 250
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 89/187 (47%), Gaps = 14/187 (7%)
Query: 233 LVEAYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHM-EMAKVLP 291
LV +Y + + A +F M E +VV+W+S+IS Y G+ ++AL F M E V P
Sbjct: 70 LVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKMHEDRPVPP 129
Query: 292 DDITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDI 351
++ TF +V KACS + + AR++ GL+ + S LVD+ + + A +
Sbjct: 130 NEYTFASVFKACSALAESRIGKNIHARLEIS-GLRRNIVVSSSLVDMYGKCNDVETARRV 188
Query: 352 IRGM-PVKVTVKAWGALLGA----CRTYGEVELAEIAGRALFEIEPDNPANYVLLARIY- 405
M V +W +++ A R + +EL AL + AN +LA +
Sbjct: 189 FDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAAL----TSDRANQFMLASVIS 244
Query: 406 --ASMGR 410
+S+GR
Sbjct: 245 ACSSLGR 251
>AT5G13230.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:4222514-4224982 FORWARD
Length = 822
Score = 205 bits (522), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 120/414 (28%), Positives = 205/414 (49%), Gaps = 34/414 (8%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
++ W+ + + GF +A+ +F ++ + + + + LS +L C+ S LG +H
Sbjct: 313 VVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVP-NEFTLSSILNGCAIGKCSGLGEQLH 371
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVS 141
+K+GF + +V+ AL+D+Y KC +A KLF E+ +N V WN +I Y +
Sbjct: 372 GLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGG 431
Query: 142 DALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRA 201
A MF A+ ++ TE +T + L A
Sbjct: 432 KAFSMFR-----------EALRNQVSVTE----------------------VTFSSALGA 458
Query: 202 CVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAW 261
C + S+++ ++HG +I+ + + + L++ Y +CG + A +VF M+ DV +W
Sbjct: 459 CASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASW 518
Query: 262 SSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQ 321
++LIS Y+ HG R AL M+ P+ +TFL VL CS+AGL D + F M +
Sbjct: 519 NALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIR 578
Query: 322 DYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVELAE 381
D+G++P +HY+C+V +L R+G+L +A +I G+P + +V W A+L A E A
Sbjct: 579 DHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFAR 638
Query: 382 IAGRALFEIEPDNPANYVLLARIYASMGRHGEAXXXXXXXXXXGVKVAPGGSWV 435
+ + +I P + A YVL++ +YA + GVK PG SW+
Sbjct: 639 RSAEEILKINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWI 692
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 91/386 (23%), Positives = 169/386 (43%), Gaps = 67/386 (17%)
Query: 20 LRLISWTKQLNSHVKQGFHQQALVVFNHI-----------------QTSLAL-------- 54
L L + LN++VK GF + AL +F+ + Q + L
Sbjct: 82 LDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYACQDPIGLYSRLHREG 141
Query: 55 -SLDPYVLSLVLKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSAR 113
L+P+V + LK ++ ++++ +HS +K+G+ SN FV AL++ Y C S SAR
Sbjct: 142 HELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSAR 201
Query: 114 KLFDEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGS 173
+F+ I +++VVW ++S Y + D+L + M +A
Sbjct: 202 TVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMA-------------------- 241
Query: 174 AKAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGL 233
PN T L+A + + + + K +HG ++ P++ GL
Sbjct: 242 -------------GFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGL 288
Query: 234 VEAYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDD 293
++ Y + G + +A VF M + DVV WS +I+ + +G A++ F M A V+P++
Sbjct: 289 LQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNE 348
Query: 294 ITFLAVLKACS---HAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYD 350
T ++L C+ +GL + ++ D + S + L+DV ++ ++ A
Sbjct: 349 FTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVS----NALIDVYAKCEKMDTAVK 404
Query: 351 IIRGMPVKVTVKAWGALLGACRTYGE 376
+ + K V +W ++ GE
Sbjct: 405 LFAELSSKNEV-SWNTVIVGYENLGE 429
>AT2G42920.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:17858705-17860384 FORWARD
Length = 559
Score = 205 bits (521), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 120/400 (30%), Positives = 211/400 (52%), Gaps = 7/400 (1%)
Query: 18 NYLRLISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSL--VLKSCSAIHRSQ 75
N+ W + + F + A+ +F + S + S+ P L+ V K+ + +++
Sbjct: 85 NHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCS-SPSVKPQRLTYPSVFKAYGRLGQAR 143
Query: 76 LGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYT 135
G +H IK G + F+ ++ MY C A ++F + +VV WN+MI +
Sbjct: 144 DGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFA 203
Query: 136 HSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAK-AIAFYWRMRELSLKPNLIT 194
+ A +FD M + ++N++I+G +G K A+ + M+E +KP+ T
Sbjct: 204 KCGLIDQAQNLFDEMP-QRNGVSWNSMISGF--VRNGRFKDALDMFREMQEKDVKPDGFT 260
Query: 195 LLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMK 254
+++LL AC + + + IH +RN + + + + L++ Y +CGC+ NVF
Sbjct: 261 MVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAP 320
Query: 255 ERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALD 314
++ + W+S+I A +G A++ F +E + + PD ++F+ VL AC+H+G A +
Sbjct: 321 KKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADE 380
Query: 315 YFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTY 374
+F M++ Y ++PS HY+ +V+VL AG L EA +I+ MPV+ W +LL ACR
Sbjct: 381 FFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKI 440
Query: 375 GEVELAEIAGRALFEIEPDNPANYVLLARIYASMGRHGEA 414
G VE+A+ A + L +++PD YVLL+ YAS G EA
Sbjct: 441 GNVEMAKRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEA 480
>AT5G15340.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:4982273-4984144 REVERSE
Length = 623
Score = 204 bits (518), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 122/420 (29%), Positives = 220/420 (52%), Gaps = 19/420 (4%)
Query: 23 ISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIHS 82
+ WT L+S + G ++ +F ++ + +D + + C+ + H
Sbjct: 77 VDWTTLLSSFSRYGLLVNSMKLFVEMRRK-RVEIDDVSVVCLFGVCAKLEDLGFAQQGHG 135
Query: 83 HSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSD 142
++KMG L++ V AL+DMYGKC +++F+E+ +++VV W ++ +
Sbjct: 136 VAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLER 195
Query: 143 ALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKP----NLITLLAL 198
+F M +A + ++AG G G + + + E+ + N +TL ++
Sbjct: 196 GREVFHEMP-ERNAVAWTVMVAGYLGA--GFTREVLEL--LAEMVFRCGHGLNFVTLCSM 250
Query: 199 LRACVRMTSLNMIKEIHGCSIRNHIDPHPQ-------LRSGLVEAYGRCGCLINASNVFY 251
L AC + +L + + +H +++ + + + + LV+ Y +CG + ++ NVF
Sbjct: 251 LSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFR 310
Query: 252 NMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADD 311
M++R+VV W++L S A+HG+ R ++ F M + +V PDD+TF AVL ACSH+G+ D+
Sbjct: 311 LMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQM-IREVKPDDLTFTAVLSACSHSGIVDE 369
Query: 312 ALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGAC 371
F ++ YGL+P DHY+C+VD+L RAG + EA ++R MPV G+LLG+C
Sbjct: 370 GWRCFHSLRF-YGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSC 428
Query: 372 RTYGEVELAEIAGRALFEIEPDNPANYVLLARIYASMGRHGEAXXXXXXXXXXGVKVAPG 431
+G+VE+AE R L ++ P N +L++ +Y + GR A G++ PG
Sbjct: 429 SVHGKVEIAERIKRELIQMSPGNTEYQILMSNMYVAEGRSDIADGLRGSLRKRGIRKIPG 488
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 73/379 (19%), Positives = 157/379 (41%), Gaps = 81/379 (21%)
Query: 61 LSLVLKSCSAIHRSQL--GAAIHSHSIKMGFLSNP--FVACALVDMYGKCVSTFSARKLF 116
+ L+L+ C+ HRS L G +H+ G P +++ AL Y +A+KLF
Sbjct: 9 VRLLLRHCA--HRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLF 66
Query: 117 DEIP--QRNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSA 174
DEIP +++ V W ++S ++ + +++ +F
Sbjct: 67 DEIPLSEKDNVDWTTLLSSFSRYGLLVNSMKLF--------------------------- 99
Query: 175 KAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLV 234
MR ++ + ++++ L C ++ L ++ HG +++ + ++ + L+
Sbjct: 100 ------VEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKMGVLTSVKVCNALM 153
Query: 235 EAYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHM---------- 284
+ YG+CG + +F ++E+ VV+W+ ++ E FH M
Sbjct: 154 DMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAVAWTV 213
Query: 285 ------------EMAKVLPDD----------ITFLAVLKACSHAG---LADDALDYFARM 319
E+ ++L + +T ++L AC+ +G + Y +
Sbjct: 214 MVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRWVHVYALKK 273
Query: 320 QQDYGLQPSSDHY---SCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGE 376
+ G + S D + LVD+ ++ G + + ++ R M K V W AL +G+
Sbjct: 274 EMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMR-KRNVVTWNALFSGLAMHGK 332
Query: 377 VELA-EIAGRALFEIEPDN 394
+ ++ + + E++PD+
Sbjct: 333 GRMVIDMFPQMIREVKPDD 351
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 92/206 (44%), Gaps = 16/206 (7%)
Query: 198 LLRACVRMTSLNMIKEIHGCSIRNHIDPHPQ--LRSGLVEAYGRCGCLINASNVFYN--M 253
LLR C + L KE+H + + P+ L + L + Y G ++ A +F +
Sbjct: 12 LLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPL 71
Query: 254 KERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSH---AGLAD 310
E+D V W++L+S+++ +G ++++ F M +V DD++ + + C+ G A
Sbjct: 72 SEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQ 131
Query: 311 DALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGA 370
+M G+ S + L+D+ + G + E I + K +V +W +L
Sbjct: 132 QGHGVAVKM----GVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEK-SVVSWTVVLDT 186
Query: 371 CRTYGEVELAEIAGRALFEIEPDNPA 396
+ +E GR +F P+ A
Sbjct: 187 VVKWEGLE----RGREVFHEMPERNA 208
>AT1G15510.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:5329111-5331711 FORWARD
Length = 866
Score = 204 bits (518), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 127/415 (30%), Positives = 215/415 (51%), Gaps = 39/415 (9%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
++SWT ++ + +A+ + + ++ D ++ VL +C+ + G +H
Sbjct: 363 IVSWTTMISGYEYNFLPDKAIDTYRMMDQD-SVKPDEITVAAVLSACATLGDLDTGVELH 421
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMIS-LYTHSNCV 140
+IK +S VA L++MY KC A +F IP++NV+ W ++I+ L ++ C
Sbjct: 422 KLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRC- 480
Query: 141 SDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLR 200
F A+I + R +++L+PN ITL A L
Sbjct: 481 ------------------FEALI----------------FLRQMKMTLQPNAITLTAALA 506
Query: 201 ACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVA 260
AC R+ +L KEIH +R + L + L++ Y RCG + A + F N +++DV +
Sbjct: 507 ACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQF-NSQKKDVTS 565
Query: 261 WSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQ 320
W+ L++ Y+ G+ +E F M ++V PD+ITF+++L CS + + L YF++M+
Sbjct: 566 WNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKME 625
Query: 321 QDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVELA 380
DYG+ P+ HY+C+VD+L RAG L EA+ I+ MPV WGALL ACR + +++L
Sbjct: 626 -DYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLG 684
Query: 381 EIAGRALFEIEPDNPANYVLLARIYASMGRHGEAXXXXXXXXXXGVKVAPGGSWV 435
E++ + +FE++ + Y+LL +YA G+ E G+ V G SWV
Sbjct: 685 ELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWV 739
Score = 141 bits (356), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 93/351 (26%), Positives = 163/351 (46%), Gaps = 35/351 (9%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
L SW + + KQG+ +A+ +++ + + D Y VL++C I G +H
Sbjct: 160 LFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVH 219
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVS 141
H ++ G+ + V AL+ MY KC SAR LFD +P+R+++ WNAMIS Y +
Sbjct: 220 VHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCH 279
Query: 142 DALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRA 201
+ L +F AM R LS+ P+L+TL +++ A
Sbjct: 280 EGLELFFAM---------------------------------RGLSVDPDLMTLTSVISA 306
Query: 202 CVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAW 261
C + + ++IH I + + L + Y G A +F M+ +D+V+W
Sbjct: 307 CELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSW 366
Query: 262 SSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQ 321
+++IS Y + A++T+ M+ V PD+IT AVL AC+ G D ++ ++
Sbjct: 367 TTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVE-LHKLAI 425
Query: 322 DYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACR 372
L + L+++ S+ + +A DI +P K V +W +++ R
Sbjct: 426 KARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRK-NVISWTSIIAGLR 475
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 129/268 (48%), Gaps = 38/268 (14%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSL--VLKSCSAIHRSQLGAA 79
+ISW ++ + + G + L +F ++ LS+DP +++L V+ +C + +LG
Sbjct: 262 IISWNAMISGYFENGMCHEGLELFFAMR---GLSVDPDLMTLTSVISACELLGDRRLGRD 318
Query: 80 IHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNC 139
IH++ I GF + V +L MY S A KLF + ++++V W MIS Y +
Sbjct: 319 IHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEY--- 375
Query: 140 VSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALL 199
+ PD KAI Y M + S+KP+ IT+ A+L
Sbjct: 376 -----------NFLPD-------------------KAIDTYRMMDQDSVKPDEITVAAVL 405
Query: 200 RACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVV 259
AC + L+ E+H +I+ + + + + L+ Y +C C+ A ++F+N+ ++V+
Sbjct: 406 SACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVI 465
Query: 260 AWSSLISAYALHGEARSALETFHHMEMA 287
+W+S+I+ L+ AL M+M
Sbjct: 466 SWTSIIAGLRLNNRCFEALIFLRQMKMT 493
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 94/408 (23%), Positives = 167/408 (40%), Gaps = 94/408 (23%)
Query: 28 QLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIHSHSIK- 86
QL+ G ++A+ + N +Q L +++D V +++ C + G+ ++S ++
Sbjct: 65 QLHGLCANGKLEEAMKLLNSMQ-ELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSS 123
Query: 87 ---MGF-LSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSD 142
+G L N F+A M+ + + A +F ++ +RN+ WN ++ Y
Sbjct: 124 MSSLGVELGNAFLA-----MFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQG---- 174
Query: 143 ALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELS-LKPNLITLLALLRA 201
FD +A+ Y RM + +KP++ T +LR
Sbjct: 175 ---YFD--------------------------EAMCLYHRMLWVGGVKPDVYTFPCVLRT 205
Query: 202 CVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAW 261
C + L KE+H +R + + + L+ Y +CG + +A +F M RD+++W
Sbjct: 206 CGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISW 265
Query: 262 SSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACS----------------- 304
+++IS Y +G LE F M V PD +T +V+ AC
Sbjct: 266 NAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVIT 325
Query: 305 ------------------HAGLADDALDYFARMQQD----YGLQPSSDHYSCLVDVLSRA 342
+AG +A F+RM++ + S Y+ L D +A
Sbjct: 326 TGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPD---KA 382
Query: 343 GRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGE----VELAEIAGRA 386
Y D P ++TV A+L AC T G+ VEL ++A +A
Sbjct: 383 IDTYRMMDQDSVKPDEITV---AAVLSACATLGDLDTGVELHKLAIKA 427
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 133/316 (42%), Gaps = 42/316 (13%)
Query: 77 GAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTH 136
G IH+H ++ G + F+ AL+DMY +C +A F+ +++V WN +++ Y+
Sbjct: 517 GKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNS-QKKDVTSWNILLTGYSE 575
Query: 137 SNCVSDALYMFDAM---HVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLI 193
S + +FD M V PD TF +++ G + ++ + + ++ +M + + PNL
Sbjct: 576 RGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQ-MVRQGLMYFSKMEDYGVTPNLK 634
Query: 194 TLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLIN-------- 245
++ R L +E H + + P P + L+ A C I+
Sbjct: 635 HYACVVDLLGRAGEL---QEAHKFIQKMPVTPDPAVWGALLNA-----CRIHHKIDLGEL 686
Query: 246 ASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSH 305
++ + + ++ V + L + YA G+ R + M+ + D +K H
Sbjct: 687 SAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGKVH 746
Query: 306 AGLADD-----------ALDYFARMQQDYGLQPSSDHYSCLVDVLSR-------AGRLYE 347
A L+DD L+ F + GL S+ S +SR + R
Sbjct: 747 AFLSDDKYHPQTKEINTVLEGFYEKMSEVGLTKISESSSMDETEISRDEIFCGHSERKAI 806
Query: 348 AYDIIR---GMPVKVT 360
A+ +I GMP+ VT
Sbjct: 807 AFGLINTVPGMPIWVT 822
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE
Length = 895
Score = 204 bits (518), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 119/411 (28%), Positives = 203/411 (49%), Gaps = 34/411 (8%)
Query: 25 WTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIHSHS 84
W ++ + G+ ++A+ +F+ + S D L+ VL CS+ G IH ++
Sbjct: 519 WASMISGFNEYGYLREAIGLFSEMLDD-GTSPDESTLAAVLTVCSSHPSLPRGKEIHGYT 577
Query: 85 IKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSDAL 144
++ G + ALV+MY KC S AR+++D +P+ + V +++IS Y+ + D
Sbjct: 578 LRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGF 637
Query: 145 YMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRACVR 204
+F M +++G T D A + ++L+A
Sbjct: 638 LLFRDM-----------VMSGF--TMDSFA--------------------ISSILKAAAL 664
Query: 205 MTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWSSL 264
++ ++H + + P + S L+ Y + G + + F + D++AW++L
Sbjct: 665 SDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTAL 724
Query: 265 ISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQDYG 324
I++YA HG+A AL+ ++ M+ PD +TF+ VL ACSH GL +++ + M +DYG
Sbjct: 725 IASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYG 784
Query: 325 LQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVELAEIAG 384
++P + HY C+VD L R+GRL EA I M +K WG LL AC+ +GEVEL ++A
Sbjct: 785 IEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHGEVELGKVAA 844
Query: 385 RALFEIEPDNPANYVLLARIYASMGRHGEAXXXXXXXXXXGVKVAPGGSWV 435
+ E+EP + Y+ L+ I A +G E GV+ PG S V
Sbjct: 845 KKAIELEPSDAGAYISLSNILAEVGEWDEVEETRKLMKGTGVQKEPGWSSV 895
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 108/238 (45%), Gaps = 36/238 (15%)
Query: 75 QLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLY 134
LG +H +++K G + + V +L +Y KC S + KLF IP ++ W +MIS +
Sbjct: 467 NLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGF 526
Query: 135 THSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLIT 194
+ +A+ +F M +DG++ P+ T
Sbjct: 527 NEYGYLREAIGLFSEM------------------LDDGTS---------------PDEST 553
Query: 195 LLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMK 254
L A+L C SL KEIHG ++R ID L S LV Y +CG L A V+ +
Sbjct: 554 LAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLP 613
Query: 255 ERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDA 312
E D V+ SSLIS Y+ HG + F M M+ D ++LKA A L+D++
Sbjct: 614 ELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKA---AALSDES 668
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 148/341 (43%), Gaps = 49/341 (14%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
++SWT L+ + K AL +F ++ S + ++ ++ V+ +C + +H
Sbjct: 316 VVSWTVMLSGYTKSNDAFSALEIFKEMRHS-GVEINNCTVTSVISACGRPSMVCEASQVH 374
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLF---DEIPQRNVVVWNAMISLYTHSN 138
+ K GF + VA AL+ MY K + ++F D+I ++N+V N MI+ ++ S
Sbjct: 375 AWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMITSFSQSK 432
Query: 139 CVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLAL 198
KAI + RM + L+ + ++ +L
Sbjct: 433 ---------------------------------KPGKAIRLFTRMLQEGLRTDEFSVCSL 459
Query: 199 LRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDV 258
L + LN+ K++HG ++++ + + S L Y +CG L + +F + +D
Sbjct: 460 LSV---LDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDN 516
Query: 259 VAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKAC-SHAGL--ADDALDY 315
W+S+IS + +G R A+ F M PD+ T AVL C SH L + Y
Sbjct: 517 ACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGY 576
Query: 316 FARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMP 356
R D G+ D S LV++ S+ G L A + +P
Sbjct: 577 TLRAGIDKGM----DLGSALVNMYSKCGSLKLARQVYDRLP 613
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 119/261 (45%), Gaps = 42/261 (16%)
Query: 20 LRLISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAA 79
L +S + ++ + + G Q ++F + S ++D + +S +LK+ + S LGA
Sbjct: 615 LDPVSCSSLISGYSQHGLIQDGFLLFRDMVMS-GFTMDSFAISSILKAAALSDESSLGAQ 673
Query: 80 IHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNC 139
+H++ K+G + P V +L+ MY K S K F +I +++ W A+I+ Y
Sbjct: 674 VHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGK 733
Query: 140 VSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALL 199
++AL +++ M+E KP+ +T + +L
Sbjct: 734 ANEALQVYNL---------------------------------MKEKGFKPDKVTFVGVL 760
Query: 200 RACVRMTSLNMIKEIH---GCSIRNH-IDPHPQLRSGLVEAYGRCGCLINASNVFYNMKE 255
AC + +++E + ++++ I+P + +V+A GR G L A + NM
Sbjct: 761 SAC---SHGGLVEESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHI 817
Query: 256 R-DVVAWSSLISAYALHGEAR 275
+ D + W +L++A +HGE
Sbjct: 818 KPDALVWGTLLAACKIHGEVE 838
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 124/299 (41%), Gaps = 47/299 (15%)
Query: 64 VLKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRN 123
V+ +CSA+ + H+IKMG+ V AL+D++ K + A K+F + N
Sbjct: 156 VISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSAN 215
Query: 124 VVVWNAMISLYTHSNCVSDALYMFDAMHVA---PDASTFNAIIAGLAGTEDGSAKAIAFY 180
V WN +I+ + +F M V PD+ T+++++A
Sbjct: 216 VYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLA---------------- 259
Query: 181 WRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRC 240
AC + L K + I+ + + + +V+ Y +C
Sbjct: 260 --------------------ACASLEKLRFGKVVQARVIKCGAE-DVFVCTAIVDLYAKC 298
Query: 241 GCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVL 300
G + A VF + VV+W+ ++S Y +A SALE F M + V ++ T +V+
Sbjct: 299 GHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVI 358
Query: 301 KACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAG------RLYEAYDIIR 353
AC + +A A + + G S + L+ + S++G +++E D I+
Sbjct: 359 SACGRPSMVCEASQVHAWVFKS-GFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQ 416
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 120/249 (48%), Gaps = 11/249 (4%)
Query: 123 NVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWR 182
+V + +++S Y++S ++DA +FD + PD + N +I+G +++ F+ +
Sbjct: 83 DVFLTKSLLSWYSNSGSMADAAKLFDTIP-QPDVVSCNIMISGYK-QHRLFEESLRFFSK 140
Query: 183 MRELSLKPNLITLLALLRACVRMTSLNMIKEIHGC-SIRNHIDPHPQLRSGLVEAYGRCG 241
M L + N I+ +++ AC + + + E+ C +I+ + + S L++ + +
Sbjct: 141 MHFLGFEANEISYGSVISACSALQA-PLFSELVCCHTIKMGYFFYEVVESALIDVFSKNL 199
Query: 242 CLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLK 301
+A VF + +V W+++I+ + + + FH M + PD T+ +VL
Sbjct: 200 RFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLA 259
Query: 302 ACSHAGLADDALDYFARMQQDYGLQPSSDHYSC--LVDVLSRAGRLYEAYDIIRGMPVKV 359
AC+ + L + +Q + D + C +VD+ ++ G + EA ++ +P
Sbjct: 260 ACASL----EKLRFGKVVQARVIKCGAEDVFVCTAIVDLYAKCGHMAEAMEVFSRIP-NP 314
Query: 360 TVKAWGALL 368
+V +W +L
Sbjct: 315 SVVSWTVML 323
>AT2G02980.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:868468-870279 FORWARD
Length = 603
Score = 203 bits (516), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 113/350 (32%), Positives = 186/350 (53%), Gaps = 33/350 (9%)
Query: 57 DPYVLSLVLKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLF 116
D Y +LK+C+ + G +H S+K+G N +V L++M
Sbjct: 128 DNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINM-------------- 173
Query: 117 DEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKA 176
YT V A +FD + V P +NA+I G A + +A
Sbjct: 174 -----------------YTECEDVDSARCVFDRI-VEPCVVCYNAMITGYA-RRNRPNEA 214
Query: 177 IAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEA 236
++ + M+ LKPN ITLL++L +C + SL++ K IH + ++ + ++ + L++
Sbjct: 215 LSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDM 274
Query: 237 YGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITF 296
+ +CG L +A ++F M+ +D AWS++I AYA HG+A ++ F M V PD+ITF
Sbjct: 275 FAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITF 334
Query: 297 LAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMP 356
L +L ACSH G ++ YF++M +G+ PS HY +VD+LSRAG L +AY+ I +P
Sbjct: 335 LGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLP 394
Query: 357 VKVTVKAWGALLGACRTYGEVELAEIAGRALFEIEPDNPANYVLLARIYA 406
+ T W LL AC ++ ++LAE +FE++ + +YV+L+ +YA
Sbjct: 395 ISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYA 444
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 118/243 (48%), Gaps = 12/243 (4%)
Query: 140 VSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALL 199
+S A ++F+AM PD FN++ G + + + + + + E + P+ T +LL
Sbjct: 79 MSYARHLFEAMS-EPDIVIFNSMARGYSRFTN-PLEVFSLFVEILEDGILPDNYTFPSLL 136
Query: 200 RACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVV 259
+AC +L +++H S++ +D + + L+ Y C + +A VF + E VV
Sbjct: 137 KACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVV 196
Query: 260 AWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARM 319
++++I+ YA AL F M+ + P++IT L+VL +C+ G D +
Sbjct: 197 CYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLD-----LGKW 251
Query: 320 QQDYGLQPSSDHY----SCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYG 375
Y + S Y + L+D+ ++ G L +A I M K T +AW A++ A +G
Sbjct: 252 IHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDT-QAWSAMIVAYANHG 310
Query: 376 EVE 378
+ E
Sbjct: 311 KAE 313
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 74/153 (48%), Gaps = 8/153 (5%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSL--VLKSCSAIHRSQLGAA 79
++ + + + ++ +AL +F +Q L P ++L VL SC+ + LG
Sbjct: 195 VVCYNAMITGYARRNRPNEALSLFREMQGKY---LKPNEITLLSVLSSCALLGSLDLGKW 251
Query: 80 IHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNC 139
IH ++ K F V AL+DM+ KC S A +F+++ ++ W+AMI Y +
Sbjct: 252 IHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGK 311
Query: 140 VSDALYMFDAM---HVAPDASTFNAIIAGLAGT 169
++ MF+ M +V PD TF ++ + T
Sbjct: 312 AEKSMLMFERMRSENVQPDEITFLGLLNACSHT 344
>AT1G31920.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11461864-11463684 REVERSE
Length = 606
Score = 202 bits (515), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 113/397 (28%), Positives = 197/397 (49%), Gaps = 33/397 (8%)
Query: 39 QQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACA 98
++AL +N + D + +LK+C+ + + G IH K+G ++ FV +
Sbjct: 114 EEALCFYNEMMQR-GNEPDNFTYPCLLKACTRLKSIREGKQIHGQVFKLGLEADVFVQNS 172
Query: 99 LVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDAST 158
L++MYG+C + +F+++ + W++M+S S+ L +F M
Sbjct: 173 LINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLLLFRGM-------- 224
Query: 159 FNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCS 218
E +LK +++ L AC +LN+ IHG
Sbjct: 225 ------------------------CSETNLKAEESGMVSALLACANTGALNLGMSIHGFL 260
Query: 219 IRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSAL 278
+RN + + +++ LV+ Y +CGCL A ++F M++R+ + +S++IS ALHGE SAL
Sbjct: 261 LRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESAL 320
Query: 279 ETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDV 338
F M + PD + +++VL ACSH+GL + FA M ++ ++P+++HY CLVD+
Sbjct: 321 RMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDL 380
Query: 339 LSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVELAEIAGRALFEIEPDNPANY 398
L RAG L EA + I+ +P++ W L CR +EL +IA + L ++ NP +Y
Sbjct: 381 LGRAGLLEEALETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDY 440
Query: 399 VLLARIYASMGRHGEAXXXXXXXXXXGVKVAPGGSWV 435
+L++ +Y+ + G+K PG S V
Sbjct: 441 LLISNLYSQGQMWDDVARTRTEIAIKGLKQTPGFSIV 477
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 116/244 (47%), Gaps = 6/244 (2%)
Query: 154 PDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKE 213
P FN +I G +A+ FY M + +P+ T LL+AC R+ S+ K+
Sbjct: 95 PCTFDFNTMIRGYVNVMS-FEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQ 153
Query: 214 IHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGE 273
IHG + ++ +++ L+ YGRCG + +S VF ++ + +WSS++SA A G
Sbjct: 154 IHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGM 213
Query: 274 ARSALETFHHM-EMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHY 332
L F M + ++ ++ L AC++ G + + + ++ + +
Sbjct: 214 WSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNIS-ELNIIVQ 272
Query: 333 SCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVELA-EIAGRALFE-I 390
+ LVD+ + G L +A I + M + + + A++ +GE E A + + + E +
Sbjct: 273 TSLVDMYVKCGCLDKALHIFQKMEKRNNL-TYSAMISGLALHGEGESALRMFSKMIKEGL 331
Query: 391 EPDN 394
EPD+
Sbjct: 332 EPDH 335
>AT1G59720.1 | Symbols: CRR28 | CRR28 (CHLORORESPIRATORY
REDUCTION28); endonuclease | chr1:21939868-21941784
REVERSE
Length = 638
Score = 202 bits (515), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 122/409 (29%), Positives = 200/409 (48%), Gaps = 45/409 (11%)
Query: 39 QQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACA 98
++A +++ + S D + VLK+C+ I G +H +K GF + +V
Sbjct: 132 EEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNG 191
Query: 99 LVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMH--VAPDA 156
L+ +YG C ARK+FDE+P+R++V WN+MI AL +F M PD
Sbjct: 192 LIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQRSFEPDG 251
Query: 157 STFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHG 216
T ++++ AG S A + LLR C +++++
Sbjct: 252 YTMQSVLSACAGLGSLSLGTWAHAF----------------LLRKCDVDVAMDVL----- 290
Query: 217 CSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARS 276
+++ L+E Y +CG L A VF M++RD+ +W+++I +A HG A
Sbjct: 291 ------------VKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEE 338
Query: 277 ALETFHHM--EMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSC 334
A+ F M + V P+ +TF+ +L AC+H G + YF M +DY ++P+ +HY C
Sbjct: 339 AMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGC 398
Query: 335 LVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYG-EVELAEIAGRALFEIEPD 393
+VD+++RAG + EA D++ MP+K W +LL AC G VEL+E R + + D
Sbjct: 399 IVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKED 458
Query: 394 NPAN-------YVLLARIYASMGRHGEAXXXXXXXXXXGVKVAPGGSWV 435
N ++ YVLL+R+YAS R + G++ PG S +
Sbjct: 459 NESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSI 507
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 130/283 (45%), Gaps = 15/283 (5%)
Query: 105 KCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTF--NAI 162
K + F+ R + E P + ++ ++ L S+ SD Y F + S+F N +
Sbjct: 65 KQLHAFTLRTTYPEEPA-TLFLYGKILQL---SSSFSDVNYAFRVFDSIENHSSFMWNTL 120
Query: 163 IAGLAGTEDGSAKAIAFYWRMREL-SLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRN 221
I A +A Y +M E P+ T +L+AC + + K++H +++
Sbjct: 121 IRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKH 180
Query: 222 HIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETF 281
+ +GL+ YG CGCL A VF M ER +V+W+S+I A GE SAL+ F
Sbjct: 181 GFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLF 240
Query: 282 HHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFAR----MQQDYGLQPSSDHYSCLVD 337
M+ + PD T +VL AC AGL +L +A + D + + L++
Sbjct: 241 REMQRS-FEPDGYTMQSVLSAC--AGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIE 297
Query: 338 VLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVELA 380
+ + G L A + +GM K + +W A++ T+G E A
Sbjct: 298 MYCKCGSLRMAEQVFQGMQ-KRDLASWNAMILGFATHGRAEEA 339
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 112/256 (43%), Gaps = 38/256 (14%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
L+SW +++ V+ G + AL +F +Q S D Y + VL +C+ + LG H
Sbjct: 217 LVSWNSMIDALVRFGEYDSALQLFREMQRSF--EPDGYTMQSVLSACAGLGSLSLGTWAH 274
Query: 82 SHSIK---MGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSN 138
+ ++ + + V +L++MY KC S A ++F + +R++ WNAMI +
Sbjct: 275 AFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHG 334
Query: 139 CVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLAL 198
+A+ FD M RE +++PN +T + L
Sbjct: 335 RAEEAMNFFDRM------------------------------VDKRE-NVRPNSVTFVGL 363
Query: 199 LRACVRMTSLNMIKEIHGCSIRNH-IDPHPQLRSGLVEAYGRCGCLINASNVFYNMKER- 256
L AC +N ++ +R++ I+P + +V+ R G + A ++ +M +
Sbjct: 364 LIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKP 423
Query: 257 DVVAWSSLISAYALHG 272
D V W SL+ A G
Sbjct: 424 DAVIWRSLLDACCKKG 439
>AT2G35030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:14761080-14762963 REVERSE
Length = 627
Score = 202 bits (513), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 128/449 (28%), Positives = 221/449 (49%), Gaps = 47/449 (10%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
++SW ++ + + G +AL +F+ + +S + V +LV Q G
Sbjct: 140 VVSWNTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALV----------QRGRIDE 189
Query: 82 SHSIKMGFLSNPFVA-CALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCV 140
+ ++ V+ A+VD K AR+LFD +P+RN++ WNAMI+ Y +N +
Sbjct: 190 AMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRI 249
Query: 141 SDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRM----------------- 183
+A +F M D +++N +I G + + KA + RM
Sbjct: 250 DEADQLFQVMP-ERDFASWNTMITGFIRNREMN-KACGLFDRMPEKNVISWTTMITGYVE 307
Query: 184 ---------------RELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQ 228
R+ S+KPN+ T +++L AC + L ++IH ++ +
Sbjct: 308 NKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEI 367
Query: 229 LRSGLVEAYGRCGCLINASNVFYN--MKERDVVAWSSLISAYALHGEARSALETFHHMEM 286
+ S L+ Y + G LI A +F N + +RD+++W+S+I+ YA HG + A+E ++ M
Sbjct: 368 VTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRK 427
Query: 287 AKVLPDDITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLY 346
P +T+L +L ACSHAGL + +++F + +D L +HY+CLVD+ RAGRL
Sbjct: 428 HGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCGRAGRLK 487
Query: 347 EAYDIIRGMPVKVTVKAWGALLGACRTYGEVELAEIAGRALFEIEPDNPANYVLLARIYA 406
+ + I +++ +GA+L AC + EV +A+ + + E D+ YVL++ IYA
Sbjct: 488 DVTNFINCDDARLSRSFYGAILSACNVHNEVSIAKEVVKKVLETGSDDAGTYVLMSNIYA 547
Query: 407 SMGRHGEAXXXXXXXXXXGVKVAPGGSWV 435
+ G+ EA G+K PG SWV
Sbjct: 548 ANGKREEAAEMRMKMKEKGLKKQPGCSWV 576
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 134/305 (43%), Gaps = 29/305 (9%)
Query: 92 NPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMH 151
N A+V Y + A LF E+P+RNVV WN MI Y S + AL +FD M
Sbjct: 108 NVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEM- 166
Query: 152 VAPDAS--TFNAIIAGLA--GTEDGSAKAIAFYWRMRELSLKPNLITLLALLRACVRMTS 207
P+ + ++N+++ L G D +A+ + RM + ++++ A++ +
Sbjct: 167 --PERNIVSWNSMVKALVQRGRID---EAMNLFERM----PRRDVVSWTAMVDGLAKNGK 217
Query: 208 LNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWSSLISA 267
++ + + C +I + ++ Y + + A +F M ERD +W+++I+
Sbjct: 218 VDEARRLFDCMPERNIISW----NAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITG 273
Query: 268 YALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQDYGLQP 327
+ + E A F M V I++ ++ ++AL+ F++M +D ++P
Sbjct: 274 FIRNREMNKACGLFDRMPEKNV----ISWTTMITGYVENKENEEALNVFSKMLRDGSVKP 329
Query: 328 SSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVK---AWGALLGACRTYGEVELAEIAG 384
+ Y ++ S L E I + + V K ALL GE+ IA
Sbjct: 330 NVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGEL----IAA 385
Query: 385 RALFE 389
R +F+
Sbjct: 386 RKMFD 390
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/258 (20%), Positives = 109/258 (42%), Gaps = 50/258 (19%)
Query: 111 SARKLFDEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTE 170
ARKLFD +P+R+VV W +I+ Y + +A +FD + + T+ A+++G
Sbjct: 64 EARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVTWTAMVSG----- 118
Query: 171 DGSAKAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLR 230
Y R ++LS+ L M N++
Sbjct: 119 ---------YLRSKQLSIAEMLFQ---------EMPERNVVS-----------------W 143
Query: 231 SGLVEAYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVL 290
+ +++ Y + G + A +F M ER++V+W+S++ A G A+ F M V
Sbjct: 144 NTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDV- 202
Query: 291 PDDITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYD 350
+++ A++ + G D+A F M + + ++ ++ ++ R+ EA
Sbjct: 203 ---VSWTAMVDGLAKNGKVDEARRLFDCMPERNIIS-----WNAMITGYAQNNRIDEADQ 254
Query: 351 IIRGMPVKVTVKAWGALL 368
+ + MP + +W ++
Sbjct: 255 LFQVMPER-DFASWNTMI 271
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 102/236 (43%), Gaps = 43/236 (18%)
Query: 208 LNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWSSLISA 267
N+++ I+ S R + P P+ L+ + G + A +F + ERDVV W+ +I+
Sbjct: 31 FNLVRSIYSSSSRPRV-PQPEW---LIGELCKVGKIAEARKLFDGLPERDVVTWTHVITG 86
Query: 268 YALHGEARSALETFHHMEMAK--------------------------VLPDD--ITFLAV 299
Y G+ R A E F ++ K +P+ +++ +
Sbjct: 87 YIKLGDMREARELFDRVDSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTM 146
Query: 300 LKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKV 359
+ + +G D AL+ F M + + ++ +V L + GR+ EA ++ MP +
Sbjct: 147 IDGYAQSGRIDKALELFDEMPERNIVS-----WNSMVKALVQRGRIDEAMNLFERMPRRD 201
Query: 360 TVKAWGALLGACRTYGEVELAEIAGRALFEIEPD-NPANYVLLARIYASMGRHGEA 414
V +W A++ G+V+ A R LF+ P+ N ++ + YA R EA
Sbjct: 202 VV-SWTAMVDGLAKNGKVDEA----RRLFDCMPERNIISWNAMITGYAQNNRIDEA 252
>AT5G43790.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:17592099-17593481 REVERSE
Length = 460
Score = 201 bits (512), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 114/361 (31%), Positives = 184/361 (50%), Gaps = 43/361 (11%)
Query: 77 GAAIHSHSIKMGFLS----NPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMIS 132
G A+H+H +K FL + FV ALV Y C AR LF+ I +
Sbjct: 132 GRALHAHVLK--FLEPVNHDRFVQAALVGFYANCGKLREARSLFERIRE----------- 178
Query: 133 LYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTE--DGSAKAIAFYWRMRELSLKP 190
PD +T+N ++A A +E D + + + RM+ ++P
Sbjct: 179 ---------------------PDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQ---VRP 214
Query: 191 NLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVF 250
N ++L+AL+++C + H ++N++ + + + L++ Y +CGCL A VF
Sbjct: 215 NELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVF 274
Query: 251 YNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLAD 310
M +RDV ++++I A+HG + +E + + ++PD TF+ + ACSH+GL D
Sbjct: 275 DEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVD 334
Query: 311 DALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGA 370
+ L F M+ YG++P +HY CLVD+L R+GRL EA + I+ MPVK W + LG+
Sbjct: 335 EGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGS 394
Query: 371 CRTYGEVELAEIAGRALFEIEPDNPANYVLLARIYASMGRHGEAXXXXXXXXXXGVKVAP 430
+T+G+ E EIA + L +E +N NYVLL+ IYA + R + V +P
Sbjct: 395 SQTHGDFERGEIALKHLLGLEFENSGNYVLLSNIYAGVNRWTDVEKTRELMKDHRVNKSP 454
Query: 431 G 431
G
Sbjct: 455 G 455
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 99/245 (40%), Gaps = 55/245 (22%)
Query: 39 QQALVVFNHIQTSLALSLDPYVLSLV--LKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVA 96
++ L++F +Q + P LSLV +KSC+ + G H + +K N FV
Sbjct: 201 EEVLLLFMRMQ------VRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVG 254
Query: 97 CALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDA 156
+L+D+Y KC ARK+FDE+ QR+V
Sbjct: 255 TSLIDLYSKCGCLSFARKVFDEMSQRDV-------------------------------- 282
Query: 157 STFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRACVR-------MTSLN 209
S +NA+I GLA G + I Y + L P+ T + + AC + N
Sbjct: 283 SCYNAMIRGLAVHGFGQ-EGIELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFN 341
Query: 210 MIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKER-DVVAWSSLISAY 268
+K ++G I+P + LV+ GR G L A M + + W S + +
Sbjct: 342 SMKAVYG------IEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGSS 395
Query: 269 ALHGE 273
HG+
Sbjct: 396 QTHGD 400
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 92/183 (50%), Gaps = 21/183 (11%)
Query: 139 CVSDALYMFDAMHVAPDASTF--NAIIAGLAGTEDGSAKAIAFYWRMRELS-----LKPN 191
C+S AL + + P+ S F N +I+ + + + +AF + LS ++PN
Sbjct: 55 CLSYALSILRQI---PNPSVFLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPN 111
Query: 192 LITLLALLRACVRMTSLNMIKEIHGCSIRNHI----DP--HPQ-LRSGLVEAYGRCGCLI 244
T +L +A + + HG ++ H+ +P H + +++ LV Y CG L
Sbjct: 112 EFTYPSLFKA----SGFDAQWHRHGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLR 167
Query: 245 NASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACS 304
A ++F ++E D+ W++L++AYA E S E +V P++++ +A++K+C+
Sbjct: 168 EARSLFERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQVRPNELSLVALIKSCA 227
Query: 305 HAG 307
+ G
Sbjct: 228 NLG 230
>AT1G74400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:27963953-27965341 FORWARD
Length = 462
Score = 201 bits (511), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 127/417 (30%), Positives = 202/417 (48%), Gaps = 46/417 (11%)
Query: 29 LNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQL-GAAIHSHSIKM 87
L +++ G +AL+ F H +D + + +K SA S L G IH+ K+
Sbjct: 35 LKQYLESGEPIKALLDFRHRFRQSPSFVDSFSVLFAIKVSSAQKASSLDGRQIHALVRKL 94
Query: 88 GFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQR-NVVVWNAMISLYTHSNCVSDALYM 146
GF + + +LV Y AR++FDE P++ N+V+W AMIS YT +
Sbjct: 95 GFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTEN--------- 145
Query: 147 FDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRACVRMT 206
+ S +AI + RM ++ + + + L AC +
Sbjct: 146 ------------------------ENSVEAIELFKRMEAEKIELDGVIVTVALSACADLG 181
Query: 207 SLNMIKEIHGCSI--RNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWSSL 264
++ M +EI+ SI + + LR+ L+ Y + G A +F +DV ++S+
Sbjct: 182 AVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSM 241
Query: 265 ISAYALHGEARSALETFHHMEMAK------VLPDDITFLAVLKACSHAGLADDALDYFAR 318
I YAL+G+A+ +LE F M+ + P+D+TF+ VL ACSH+GL ++ +F
Sbjct: 242 IFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKS 301
Query: 319 MQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVE 378
M DY L+P H+ C+VD+ R+G L +A++ I MP+K W LLGAC +G VE
Sbjct: 302 MIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPNTVIWRTLLGACSLHGNVE 361
Query: 379 LAEIAGRALFEIEPDNPANYVLLARIYASMGRHGEAXXXXXXXXXXGVKVAPGGSWV 435
L E R +FE++ D+ +YV L+ IYAS G E + PG SW+
Sbjct: 362 LGEEVQRRIFELDRDHVGDYVALSNIYASKGMWDEKSKMRDRVRK---RRMPGKSWI 415
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 113/255 (44%), Gaps = 32/255 (12%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
++ WT ++++ + +A+ +F ++ + LD ++++ L +C+ + Q+G I+
Sbjct: 132 IVLWTAMISAYTENENSVEAIELFKRMEAE-KIELDGVIVTVALSACADLGAVQMGEEIY 190
Query: 82 SHSIKMG--FLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNC 139
S SIK + + +L++MY K T ARKLFDE +++V + +MI Y +
Sbjct: 191 SRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQ 250
Query: 140 VSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALL 199
++L +F M T D S + + PN +T + +L
Sbjct: 251 AQESLELFKKMK-----------------TIDQSQDTV----------ITPNDVTFIGVL 283
Query: 200 RACVRMTSLNMIKEIHGCSIRNH-IDPHPQLRSGLVEAYGRCGCLINASNVFYNMKER-D 257
AC + K I ++ + P +V+ + R G L +A M + +
Sbjct: 284 MACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPN 343
Query: 258 VVAWSSLISAYALHG 272
V W +L+ A +LHG
Sbjct: 344 TVIWRTLLGACSLHG 358
>AT3G56550.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:20952896-20954641 REVERSE
Length = 581
Score = 201 bits (510), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 121/398 (30%), Positives = 191/398 (47%), Gaps = 37/398 (9%)
Query: 40 QALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACAL 99
+++ +N + S D + + LKSC I IH I+ GFL + VA +L
Sbjct: 89 NSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCLEIHGSVIRSGFLDDAIVATSL 148
Query: 100 VDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTF 159
V Y S A K+FDE+P R++V WN MI ++H
Sbjct: 149 VRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSH----------------------- 185
Query: 160 NAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIH--GC 217
GL +A++ Y RM + + TL+ALL +C +++LNM +H C
Sbjct: 186 ----VGLHN------QALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIAC 235
Query: 218 SIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSA 277
IR + + + L++ Y +CG L NA VF M++RDV+ W+S+I Y +HG A
Sbjct: 236 DIR--CESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEA 293
Query: 278 LETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVD 337
+ F M + V P+ ITFL +L CSH GL + +++F M + L P+ HY C+VD
Sbjct: 294 ISFFRKMVASGVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVD 353
Query: 338 VLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVELAEIAGRALFEIEPDNPAN 397
+ RAG+L + ++I W LLG+C+ + +EL E+A + L ++E N +
Sbjct: 354 LYGRAGQLENSLEMIYASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGD 413
Query: 398 YVLLARIYASMGRHGEAXXXXXXXXXXGVKVAPGGSWV 435
YVL+ IY++ ++ PG SW+
Sbjct: 414 YVLMTSIYSAANDAQAFASMRKLIRSHDLQTVPGWSWI 451
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 125/277 (45%), Gaps = 10/277 (3%)
Query: 99 LVDMYGKCVSTFSARKLFDEIP----QRNVVVWNAMISL--YTHSNCVSDALYMFDAMHV 152
+V M C S RK+ + Q + ++N ++ + + +S A +FD
Sbjct: 8 IVRMLQGCNSMKKLRKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDHFDS 67
Query: 153 APDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSL-KPNLITLLALLRACVRMTSLNMI 211
P S +N +I G + + +I FY RM S+ +P+L T L++C R+ S+
Sbjct: 68 DPSTSDWNYLIRGFSNSSS-PLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKC 126
Query: 212 KEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWSSLISAYALH 271
EIHG IR+ + + LV Y G + AS VF M RD+V+W+ +I ++
Sbjct: 127 LEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHV 186
Query: 272 GEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDH 331
G AL + M V D T +A+L +C+H + + R+ D +
Sbjct: 187 GLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGV-MLHRIACDIRCESCVFV 245
Query: 332 YSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALL 368
+ L+D+ ++ G L A + GM K V W +++
Sbjct: 246 SNALIDMYAKCGSLENAIGVFNGMR-KRDVLTWNSMI 281
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 111/255 (43%), Gaps = 42/255 (16%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
L+SW + G H QAL ++ + + D Y L +L SC+ + +G +H
Sbjct: 173 LVSWNVMICCFSHVGLHNQALSMYKRMGNE-GVCGDSYTLVALLSSCAHVSALNMGVMLH 231
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVS 141
+ + S FV+ AL+DMY KC S +A +F+ + +R+V+ WN+MI Y
Sbjct: 232 RIACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGY------- 284
Query: 142 DALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRA 201
G +AI+F+ +M ++PN IT L LL
Sbjct: 285 --------------------------GVHGHGVEAISFFRKMVASGVRPNAITFLGLLLG 318
Query: 202 CVRMTSLNMIKE----IHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMK-ER 256
C + ++KE S + H+ P+ + +V+ YGR G L N+ + Y
Sbjct: 319 C---SHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHE 375
Query: 257 DVVAWSSLISAYALH 271
D V W +L+ + +H
Sbjct: 376 DPVLWRTLLGSCKIH 390
>AT3G13880.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4572180-4574426 FORWARD
Length = 748
Score = 201 bits (510), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 141/489 (28%), Positives = 221/489 (45%), Gaps = 77/489 (15%)
Query: 23 ISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRS---QLGAA 79
+SW ++ +V+ G ++ L + + L+L Y L VLK+C + G A
Sbjct: 215 VSWNSLISGYVRVGAAEEPLNLLAKMHRD-GLNLTTYALGSVLKACCINLNEGFIEKGMA 273
Query: 80 IHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNC 139
IH ++ K+G + V AL+DMY K S A KLF +P +NVV +NAMIS + +
Sbjct: 274 IHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDE 333
Query: 140 VSD-----ALYMFDAMH---VAPDASTFNAII---------------------------- 163
++D A +F M + P STF+ ++
Sbjct: 334 ITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDE 393
Query: 164 ----------AGLAGTEDG-------SAKAIAFYWRM-----------------REL--- 186
A + TEDG S + IA + M R+L
Sbjct: 394 FIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSS 453
Query: 187 SLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINA 246
++P T+ ++ AC +L+ ++I G +I++ ID +++ + Y + G + A
Sbjct: 454 HIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLA 513
Query: 247 SNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHA 306
+ VF ++ DV +S++IS+ A HG A AL F M+ + P+ FL VL AC H
Sbjct: 514 NQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHG 573
Query: 307 GLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGA 366
GL L YF M+ DY + P+ H++CLVD+L R GRL +A ++I + W A
Sbjct: 574 GLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRA 633
Query: 367 LLGACRTYGEVELAEIAGRALFEIEPDNPANYVLLARIYASMGRHGEAXXXXXXXXXXGV 426
LL +CR Y + + + L E+EP+ +YVLL IY G + A GV
Sbjct: 634 LLSSCRVYKDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMRDRGV 693
Query: 427 KVAPGGSWV 435
K P SW+
Sbjct: 694 KKEPALSWI 702
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 134/317 (42%), Gaps = 49/317 (15%)
Query: 76 LGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYT 135
LG H H IK ++ L++MY KC AR+LFD +P+RN++ +N++IS YT
Sbjct: 65 LGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFNSLISGYT 124
Query: 136 HSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITL 195
A+ +F RE +LK + T
Sbjct: 125 QMGFYEQAMELF---------------------------------LEAREANLKLDKFTY 151
Query: 196 LALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKE 255
L C L++ + +HG + N + L + L++ Y +CG L A ++F E
Sbjct: 152 AGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDE 211
Query: 256 RDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACS---HAGLADDA 312
RD V+W+SLIS Y G A L M + +VLKAC + G +
Sbjct: 212 RDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKG 271
Query: 313 LD---YFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLG 369
+ Y A++ ++ + + L+D+ ++ G L EA + MP K V + A++
Sbjct: 272 MAIHCYTAKLGMEFDIVVR----TALLDMYAKNGSLKEAIKLFSLMPSK-NVVTYNAMIS 326
Query: 370 ACRTYGEVELAEIAGRA 386
G +++ EI A
Sbjct: 327 -----GFLQMDEITDEA 338
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 126/293 (43%), Gaps = 42/293 (14%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
+IS+ ++ + + GF++QA+ +F + + L LD + + L C LG +H
Sbjct: 113 IISFNSLISGYTQMGFYEQAMELFLEAREA-NLKLDKFTYAGALGFCGERCDLDLGELLH 171
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVS 141
+ G F+ L+DMY KC A LFD +R+ V WN++IS Y
Sbjct: 172 GLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAE 231
Query: 142 DALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRA 201
+ L + MH DG L L ++L+A
Sbjct: 232 EPLNLLAKMH------------------RDG---------------LNLTTYALGSVLKA 258
Query: 202 CVRMTSLNMIKE---IHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDV 258
C + I++ IH + + ++ +R+ L++ Y + G L A +F M ++V
Sbjct: 259 CCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNV 318
Query: 259 VAWSSLISAY----ALHGEARS-ALETFHHMEMAKVLPDDITFLAVLKACSHA 306
V ++++IS + + EA S A + F M+ + P TF VLKACS A
Sbjct: 319 VTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAA 371
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 110/254 (43%), Gaps = 36/254 (14%)
Query: 16 SSNYLRLISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQ 75
S++ + SWT ++ HV+ + A +F + +S + + Y +SL++ +C+
Sbjct: 418 STSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSS-HIRPEEYTVSLMMSACADFAALS 476
Query: 76 LGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYT 135
G I ++IK G + V + + MY K + A ++F E+ +V ++AMIS
Sbjct: 477 SGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLA 536
Query: 136 HSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITL 195
++AL +F++ M+ +KPN
Sbjct: 537 QHGSANEALNIFES---------------------------------MKTHGIKPNQQAF 563
Query: 196 LALLRACVRMTSLNMIKEIHGCSIRNH-IDPHPQLRSGLVEAYGRCGCLINASNVFYNMK 254
L +L AC + + C ++ I+P+ + + LV+ GR G L +A N+ +
Sbjct: 564 LGVLIACCHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSG 623
Query: 255 ERD-VVAWSSLISA 267
+D V W +L+S+
Sbjct: 624 FQDHPVTWRALLSS 637
>AT5G50990.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 6 plant
structures; EXPRESSED DURING: F mature embryo stage,
petal differentiation and expansion stage, D bilateral
stage, E expanded cotyledon stage; CONTAINS InterPro
DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885);
BEST Arabidopsis thaliana protein match is: binding
(TAIR:AT3G62890.1); Has 13116 Blast hits to 4886
proteins in 160 species: Archae - 0; Bacteria - 0;
Metazoa - 67; Fungi - 72; Plants - 12769; Viruses - 0;
Other Eukaryotes - 208 (source: NCBI BLink). |
chr5:20739453-20741281 FORWARD
Length = 534
Score = 200 bits (509), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 124/382 (32%), Positives = 195/382 (51%), Gaps = 8/382 (2%)
Query: 57 DPYVLSLVLKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLF 116
D +L VL+SC A S+ H+ K+G+ + P + + V Y +C ++ AR+L
Sbjct: 29 DHGMLKQVLESCKAPSNSKCVLQAHAQIFKLGYGTYPSLLVSTVAAYRRCNRSYLARRLL 88
Query: 117 DEIPQRNVVVWNAMISLYTHS-NCVSDALYMFDAMHVAPDAS--TFNAIIAGLAGTEDGS 173
+ V N I+L S + ++ + A D + T+N +I G
Sbjct: 89 LWFLSLSPGVCN--INLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYE 146
Query: 174 AKAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGL 233
A + +KPN + + L AC R+ L+ K +H I + I+ + L S L
Sbjct: 147 EALKALKNMLSFTDIKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSAL 206
Query: 234 VEAYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDD 293
V+ Y +CG + + VFY++K DV W+++I+ +A HG A A+ F ME V PD
Sbjct: 207 VDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDS 266
Query: 294 ITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIR 353
ITFL +L CSH GL ++ +YF M + + +QP +HY +VD+L RAGR+ EAY++I
Sbjct: 267 ITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIE 326
Query: 354 GMPVKVTVKAWGALLGACRTYGEVELAEIAGRALFEIEPDNPANYVLLARIYASMGRHGE 413
MP++ V W +LL + RTY EL EIA + L + + +YVLL+ IY+S +
Sbjct: 327 SMPIEPDVVIWRSLLSSSRTYKNPELGEIAIQNLSKAK---SGDYVLLSNIYSSTKKWES 383
Query: 414 AXXXXXXXXXXGVKVAPGGSWV 435
A G++ A G SW+
Sbjct: 384 AQKVRELMSKEGIRKAKGKSWL 405
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 108/251 (43%), Gaps = 41/251 (16%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
+I+W + +V+ +++AL ++ + + + + + L +C+ + +H
Sbjct: 129 VITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACARLGDLHHAKWVH 188
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVS 141
S I G N ++ ALVD+Y KC ++R++F + + +V +WNAMI+ + +
Sbjct: 189 SLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGLAT 248
Query: 142 DALYMFDAM---HVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLAL 198
+A+ +F M HV+PD+ IT L L
Sbjct: 249 EAIRVFSEMEAEHVSPDS------------------------------------ITFLGL 272
Query: 199 LRACVRMTSLNMIKEIHGC-SIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMK-ER 256
L C L KE G S R I P + +V+ GR G + A + +M E
Sbjct: 273 LTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEP 332
Query: 257 DVVAWSSLISA 267
DVV W SL+S+
Sbjct: 333 DVVIWRSLLSS 343
>AT1G18485.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:6363172-6366084 FORWARD
Length = 970
Score = 200 bits (508), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 110/414 (26%), Positives = 208/414 (50%), Gaps = 37/414 (8%)
Query: 24 SWTKQLNSHVKQGFHQQALVVFNHIQTSLA-LSLDPYVLSLVLKSCSAIHRSQLGAAIHS 82
SW + H + + L + H+Q ++ L D + + +L +CS + +LG +H
Sbjct: 463 SWNALIGGHAQS--NDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHG 520
Query: 83 HSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSD 142
I+ + FV +++ +Y C + + LFD + +++V WN +I+ Y +
Sbjct: 521 FIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNG---- 576
Query: 143 ALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRAC 202
PD +A+ + +M ++ I+++ + AC
Sbjct: 577 ----------FPD-------------------RALGVFRQMVLYGIQLCGISMMPVFGAC 607
Query: 203 VRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWS 262
+ SL + +E H ++++ ++ + L++ Y + G + +S VF +KE+ +W+
Sbjct: 608 SLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWN 667
Query: 263 SLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQD 322
++I Y +HG A+ A++ F M+ PDD+TFL VL AC+H+GL + L Y +M+
Sbjct: 668 AMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSS 727
Query: 323 YGLQPSSDHYSCLVDVLSRAGRLYEAYDII-RGMPVKVTVKAWGALLGACRTYGEVELAE 381
+GL+P+ HY+C++D+L RAG+L +A ++ M + V W +LL +CR + +E+ E
Sbjct: 728 FGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGE 787
Query: 382 IAGRALFEIEPDNPANYVLLARIYASMGRHGEAXXXXXXXXXXGVKVAPGGSWV 435
LFE+EP+ P NYVLL+ +YA +G+ + ++ G SW+
Sbjct: 788 KVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWI 841
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/352 (22%), Positives = 157/352 (44%), Gaps = 35/352 (9%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
L W ++S+ + + + L F + ++ L D + V+K+C+ + +G A+H
Sbjct: 151 LFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVH 210
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVS 141
+K G + + FV ALV YG A +LFD +P+RN+V WN+MI +++ +
Sbjct: 211 GLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSE 270
Query: 142 DALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRA 201
++ + M E+G + P++ TL+ +L
Sbjct: 271 ESFLLLGEMM-----------------EENGDG------------AFMPDVATLVTVLPV 301
Query: 202 CVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAW 261
C R + + K +HG +++ +D L + L++ Y +CGC+ NA +F ++VV+W
Sbjct: 302 CAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSW 361
Query: 262 SSLISAYALHGEARSALETFHHMEMA--KVLPDDITFLAVLKACSHAGLADDALD-YFAR 318
++++ ++ G+ + M V D++T L + C H + +
Sbjct: 362 NTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYS 421
Query: 319 MQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGA 370
++Q++ + V ++ G L A + G+ K TV +W AL+G
Sbjct: 422 LKQEFVYNELV--ANAFVASYAKCGSLSYAQRVFHGIRSK-TVNSWNALIGG 470
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 126/286 (44%), Gaps = 34/286 (11%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSL---ALSLDPYVLSLVLKSCSAIHRSQLGA 78
L+SW + GF +++ ++ + A D L VL C+ LG
Sbjct: 253 LVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGK 312
Query: 79 AIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSN 138
+H ++K+ + AL+DMY KC +A+ +F +NVV WN M+ ++
Sbjct: 313 GVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAE- 371
Query: 139 CVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLAL 198
TF+ + LAG ED +K + +T+L
Sbjct: 372 --------------GDTHGTFDVLRQMLAGGED----------------VKADEVTILNA 401
Query: 199 LRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDV 258
+ C + L +KE+H S++ + + + V +Y +CG L A VF+ ++ + V
Sbjct: 402 VPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTV 461
Query: 259 VAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACS 304
+W++LI +A + R +L+ M+++ +LPD T ++L ACS
Sbjct: 462 NSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACS 507
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 147/333 (44%), Gaps = 48/333 (14%)
Query: 80 IHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNC 139
+H +S+K F+ N VA A V Y KC S A+++F I + V WNA+I + SN
Sbjct: 417 LHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSN- 475
Query: 140 VSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALL 199
D DA + +M+ L P+ T+ +LL
Sbjct: 476 --DPRLSLDA------------------------------HLQMKISGLLPDSFTVCSLL 503
Query: 200 RACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVV 259
AC ++ SL + KE+HG IRN ++ + ++ Y CG L +F M+++ +V
Sbjct: 504 SACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLV 563
Query: 260 AWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACS---HAGLADDALDY- 315
+W+++I+ Y +G AL F M + + I+ + V ACS L +A Y
Sbjct: 564 SWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYA 623
Query: 316 FARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYG 375
+ +D S L+D+ ++ G + ++ + G+ K T +W A++ YG
Sbjct: 624 LKHLLEDDAFIACS-----LIDMYAKNGSITQSSKVFNGLKEKSTA-SWNAMIMG---YG 674
Query: 376 EVELAEIAGRALFEIEPD--NPANYVLLARIYA 406
LA+ A + E++ NP + L + A
Sbjct: 675 IHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTA 707
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/325 (22%), Positives = 133/325 (40%), Gaps = 45/325 (13%)
Query: 61 LSLVLKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACA-LVDMYGKCVSTFSARKLFDEI 119
L L+L++ ++G IH L N V C ++ MY C S +R +FD +
Sbjct: 87 LGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDAL 146
Query: 120 PQRNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAF 179
+N+ WNA+IS Y+ + + L F M D
Sbjct: 147 RSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTD------------------------ 182
Query: 180 YWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGR 239
L P+ T +++AC M+ + + +HG ++ + + + LV YG
Sbjct: 183 --------LLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGT 234
Query: 240 CGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSAL----ETFHHMEMAKVLPDDIT 295
G + +A +F M ER++V+W+S+I ++ +G + + E +PD T
Sbjct: 235 HGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVAT 294
Query: 296 FLAVLKACSHA---GLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDII 352
+ VL C+ GL + +++ D L + + L+D+ S+ G + A I
Sbjct: 295 LVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLN----NALMDMYSKCGCITNAQMIF 350
Query: 353 RGMPVKVTVKAWGALLGACRTYGEV 377
+ M V +W ++G G+
Sbjct: 351 K-MNNNKNVVSWNTMVGGFSAEGDT 374
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 112/259 (43%), Gaps = 49/259 (18%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
L+SW + +++ GF +AL VF + + L + V +CS + +LG H
Sbjct: 562 LVSWNTVITGYLQNGFPDRALGVFRQM-VLYGIQLCGISMMPVFGACSLLPSLRLGREAH 620
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVS 141
++++K + F+AC+L+DMY K S + K+F+ + +++ WNAMI Y
Sbjct: 621 AYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYG------ 674
Query: 142 DALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRA 201
I GLA +AI + M+ P+ +T L +L A
Sbjct: 675 ---------------------IHGLA------KEAIKLFEEMQRTGHNPDDLTFLGVLTA 707
Query: 202 CVR-------MTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYN-- 252
C + L+ +K G + P+ + + +++ GR G L A V
Sbjct: 708 CNHSGLIHEGLRYLDQMKSSFG------LKPNLKHYACVIDMLGRAGQLDKALRVVAEEM 761
Query: 253 MKERDVVAWSSLISAYALH 271
+E DV W SL+S+ +H
Sbjct: 762 SEEADVGIWKSLLSSCRIH 780
>AT5G61800.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:24830054-24831553 REVERSE
Length = 499
Score = 199 bits (507), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 112/363 (30%), Positives = 191/363 (52%), Gaps = 8/363 (2%)
Query: 57 DPYVLSLVLKSCSAIHRSQLG--AAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARK 114
D + V K+C+A L +H +++ G LS+ F L+ +Y SA +
Sbjct: 114 DFHTFPFVFKACAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQ 173
Query: 115 LFDEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSA 174
LFDE PQR+VV +N +I + + A +FD+M + D ++N++I+G A +
Sbjct: 174 LFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLR-DLVSWNSLISGYAQM-NHCR 231
Query: 175 KAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLV 234
+AI + M L LKP+ + +++ L AC + K IH + R + L +GLV
Sbjct: 232 EAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLV 291
Query: 235 EAYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDI 294
+ Y +CG + A +F ++ + W+++I+ A+HG ++ F M + + PD +
Sbjct: 292 DFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGV 351
Query: 295 TFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRG 354
TF++VL CSH+GL D+A + F +M+ Y + HY C+ D+L RAG + EA ++I
Sbjct: 352 TFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQ 411
Query: 355 MPV----KVTVKAWGALLGACRTYGEVELAEIAGRALFEIEPDNPANYVLLARIYASMGR 410
MP + + AW LLG CR +G +E+AE A + + P++ Y ++ +YA+ R
Sbjct: 412 MPKDGGNREKLLAWSGLLGGCRIHGNIEIAEKAANRVKALSPEDGGVYKVMVEMYANAER 471
Query: 411 HGE 413
E
Sbjct: 472 WEE 474
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 115/260 (44%), Gaps = 46/260 (17%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLV--LKSCSAIHRSQLGAA 79
L+SW ++ + + ++A+ +F+ + +AL L P +++V L +C+ Q G A
Sbjct: 214 LVSWNSLISGYAQMNHCREAIKLFDEM---VALGLKPDNVAIVSTLSACAQSGDWQKGKA 270
Query: 80 IHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNC 139
IH ++ + + F+A LVD Y KC +A ++F+ + + WNAMI+
Sbjct: 271 IHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMIT------- 323
Query: 140 VSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALL 199
GLA +G + ++ +M +KP+ +T +++L
Sbjct: 324 -------------------------GLAMHGNGEL-TVDYFRKMVSSGIKPDGVTFISVL 357
Query: 200 RACVRMTSLNMIKEIHGCSIRNHIDPHPQLR--SGLVEAYGRCGCLINASNVFYNMKE-- 255
C ++ + + +R+ D + +++ + + GR G + A+ + M +
Sbjct: 358 VGCSHSGLVDEARNLFD-QMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDG 416
Query: 256 ---RDVVAWSSLISAYALHG 272
++AWS L+ +HG
Sbjct: 417 GNREKLLAWSGLLGGCRIHG 436
>AT3G62890.1 | Symbols: | binding | chr3:23246168-23247973 FORWARD
Length = 573
Score = 199 bits (506), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 114/370 (30%), Positives = 195/370 (52%), Gaps = 15/370 (4%)
Query: 76 LGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYT 135
LG H+ + G +PFV +L++MY C SA+++FD+ +++ WN++++ Y
Sbjct: 80 LGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYA 139
Query: 136 HSNCVSDALYMFDAMHVAPDAS--TFNAIIAGLAGTEDGSAK-AIAFYWRMR-----ELS 187
+ + DA +FD M P+ + +++ +I G G K A+ + M+ E
Sbjct: 140 KAGLIDDARKLFDEM---PERNVISWSCLINGYVMC--GKYKEALDLFREMQLPKPNEAF 194
Query: 188 LKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINAS 247
++PN T+ +L AC R+ +L K +H + H++ L + L++ Y +CG L A
Sbjct: 195 VRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAK 254
Query: 248 NVFYNM-KERDVVAWSSLISAYALHGEARSALETFHHMEMA-KVLPDDITFLAVLKACSH 305
VF + ++DV A+S++I A++G + F M + + P+ +TF+ +L AC H
Sbjct: 255 RVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVH 314
Query: 306 AGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWG 365
GL ++ YF M +++G+ PS HY C+VD+ R+G + EA I MP++ V WG
Sbjct: 315 RGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWG 374
Query: 366 ALLGACRTYGEVELAEIAGRALFEIEPDNPANYVLLARIYASMGRHGEAXXXXXXXXXXG 425
+LL R G+++ E A + L E++P N YVLL+ +YA GR E G
Sbjct: 375 SLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKG 434
Query: 426 VKVAPGGSWV 435
+ PG S+V
Sbjct: 435 INKVPGCSYV 444
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 113/262 (43%), Gaps = 39/262 (14%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQ----TSLALSLDPYVLSLVLKSCSAIHRSQLG 77
+ISW+ +N +V G +++AL +F +Q + + + +S VL +C + + G
Sbjct: 159 VISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQG 218
Query: 78 AAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEI-PQRNVVVWNAMISLYTH 136
+H++ K + + AL+DMY KC S A+++F+ + +++V ++AMI
Sbjct: 219 KWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAM 278
Query: 137 SNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLL 196
+ +F M + + + PN +T +
Sbjct: 279 YGLTDECFQLFSEMTTSDN--------------------------------INPNSVTFV 306
Query: 197 ALLRACVRMTSLNMIKEIHGCSIRNH-IDPHPQLRSGLVEAYGRCGCLINASNVFYNMK- 254
+L ACV +N K I I P Q +V+ YGR G + A + +M
Sbjct: 307 GILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPM 366
Query: 255 ERDVVAWSSLISAYALHGEARS 276
E DV+ W SL+S + G+ ++
Sbjct: 367 EPDVLIWGSLLSGSRMLGDIKT 388
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 111/268 (41%), Gaps = 39/268 (14%)
Query: 146 MFDAMHVAPDASTFNAIIAGLAGTEDGSAK--AIAFYWRMRELSLKPNLITLLALLRACV 203
+F H+ ++ +N II + + I+ Y RMR + P+ T LL +
Sbjct: 14 IFHIRHLKLESFLWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFH 73
Query: 204 RMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWSS 263
L + + H + +D P +R+ L+ Y CG L +A VF + +D+ AW+S
Sbjct: 74 NPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNS 133
Query: 264 LISAYA-------------------------------LHGEARSALETFHHMEMAK---- 288
+++AYA + G+ + AL+ F M++ K
Sbjct: 134 VVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEA 193
Query: 289 -VLPDDITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYE 347
V P++ T VL AC G + A + + Y ++ + L+D+ ++ G L
Sbjct: 194 FVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDK-YHVEIDIVLGTALIDMYAKCGSLER 252
Query: 348 AYDIIRGMPVKVTVKAWGALLGACRTYG 375
A + + K VKA+ A++ YG
Sbjct: 253 AKRVFNALGSKKDVKAYSAMICCLAMYG 280
>AT1G10330.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3388747-3390150 FORWARD
Length = 467
Score = 198 bits (503), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 129/447 (28%), Positives = 224/447 (50%), Gaps = 14/447 (3%)
Query: 1 MFCEAKLNQLRIMSYSSNYLRLISWTKQ------LNSHVKQGFHQQALVVFNHIQTSLAL 54
++ ++ Q+ + +SN L W + + S++ G ++ +L +F H+ S
Sbjct: 24 LYSSNQIKQIHTVLLTSNALVASRWKTKCVYNTLIRSYLTTGEYKTSLALFTHMLASHVQ 83
Query: 55 SLDPYVLSLVLKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARK 114
+ SL+ +CS+ S G A+H ++K GFL +PFV + V YG+ S+RK
Sbjct: 84 PNNLTFPSLIKAACSSFSVS-YGVALHGQALKRGFLWDPFVQTSFVRFYGEVGDLESSRK 142
Query: 115 LFDEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSA 174
+FD+I VV N+++ + + A F M V D ++ +I G + + A
Sbjct: 143 MFDDILNPCVVACNSLLDACGRNGEMDYAFEYFQRMPVT-DVVSWTTVINGFS-KKGLHA 200
Query: 175 KAIAFYWRM---RELSLKPNLITLLALLRACVRMTS--LNMIKEIHGCSIRNHIDPHPQL 229
KA+ + M + PN T +++L +C + + K+IHG + I L
Sbjct: 201 KALMVFGEMIQNERAVITPNEATFVSVLSSCANFDQGGIRLGKQIHGYVMSKEIILTTTL 260
Query: 230 RSGLVEAYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKV 289
+ L++ YG+ G L A +F ++++ V AW+++ISA A +G + ALE F M+ + V
Sbjct: 261 GTALLDMYGKAGDLEMALTIFDQIRDKKVCAWNAIISALASNGRPKQALEMFEMMKSSYV 320
Query: 290 LPDDITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAY 349
P+ IT LA+L AC+ + L D + F+ + +Y + P+S+HY C+VD++ RAG L +A
Sbjct: 321 HPNGITLLAILTACARSKLVDLGIQLFSSICSEYKIIPTSEHYGCVVDLIGRAGLLVDAA 380
Query: 350 DIIRGMPVKVTVKAWGALLGACRTYGEVELAEIAGRALFEIEPDNPANYVLLARIYASMG 409
+ I+ +P + GALLGAC+ + EL G+ L ++P + YV L+ A
Sbjct: 381 NFIQSLPFEPDASVLGALLGACKIHENTELGNTVGKQLIGLQPQHCGQYVALSTFNALDS 440
Query: 410 RHGEAXXXXXXXXXXGVKVAPGGSWVT 436
EA G++ P S +T
Sbjct: 441 NWSEAEKMRKAMIEAGIRKIPAYSVLT 467
>AT4G39952.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:18527680-18530007 FORWARD
Length = 726
Score = 197 bits (500), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 123/361 (34%), Positives = 178/361 (49%), Gaps = 37/361 (10%)
Query: 76 LGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYT 135
LG ++H + +K V +L+D+YGK A ++F E NV+ WNAMI+ Y
Sbjct: 402 LGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCE-ADTNVITWNAMIASYV 460
Query: 136 HSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITL 195
H + S KAIA + RM + KP+ ITL
Sbjct: 461 HC---------------------------------EQSEKAIALFDRMVSENFKPSSITL 487
Query: 196 LALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKE 255
+ LL ACV SL + IH + + L + L++ Y +CG L + +F +
Sbjct: 488 VTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQ 547
Query: 256 RDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDY 315
+D V W+ +IS Y +HG+ SA+ F ME + V P TFLA+L AC+HAGL +
Sbjct: 548 KDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKL 607
Query: 316 FARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYG 375
F +M Q Y ++P+ HYSCLVD+LSR+G L EA + MP WG LL +C T+G
Sbjct: 608 FLKMHQ-YDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTHG 666
Query: 376 EVELA-EIAGRALFEIEPDNPANYVLLARIYASMGRHGEAXXXXXXXXXXGVKVAPGGSW 434
E E+ +A RA+ +P N Y++LA +Y++ G+ EA GV G S
Sbjct: 667 EFEMGIRMAERAVAS-DPQNDGYYIMLANMYSAAGKWEEAERAREMMRESGVGKRAGHSV 725
Query: 435 V 435
V
Sbjct: 726 V 726
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 119/279 (42%), Gaps = 58/279 (20%)
Query: 1 MFCEAKLNQLRIMSYSSNYLRLISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYV 60
MFCEA N +I+W + S+V ++A+ +F+ + ++ + P
Sbjct: 441 MFCEADTN-------------VITWNAMIASYVHCEQSEKAIALFDRM---VSENFKPSS 484
Query: 61 LSLV--LKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDE 118
++LV L +C + G IH + + N ++ AL+DMY KC +R+LFD
Sbjct: 485 ITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDA 544
Query: 119 IPQRNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIA 178
Q++ V WN MIS Y V A+ +FD
Sbjct: 545 GNQKDAVCWNVMISGYGMHGDVESAIALFD------------------------------ 574
Query: 179 FYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNH-IDPHPQLR--SGLVE 235
+M E +KP T LALL AC T ++++ ++ H D P L+ S LV+
Sbjct: 575 ---QMEESDVKPTGPTFLALLSAC---THAGLVEQGKKLFLKMHQYDVKPNLKHYSCLVD 628
Query: 236 AYGRCGCLINASNVFYNMK-ERDVVAWSSLISAYALHGE 273
R G L A + +M D V W +L+S+ HGE
Sbjct: 629 LLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTHGE 667
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 112/271 (41%), Gaps = 32/271 (11%)
Query: 25 WTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIHSHS 84
W + +H G + ++L F + S S D + +V+ +C+ + +G +H
Sbjct: 93 WNSIIKAHFSNGDYARSLCFFFSMLLS-GQSPDHFTAPMVVSACAELLWFHVGTFVHGLV 151
Query: 85 IKMG-FLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSDA 143
+K G F N V + V Y KC A +FDE+P R+VV W A+IS + +
Sbjct: 152 LKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGG 211
Query: 144 LYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRACV 203
L MH A KPN TL +AC
Sbjct: 212 LGYLCKMHSAGSDVD------------------------------KPNPRTLECGFQACS 241
Query: 204 RMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWSS 263
+ +L + +HG +++N + ++S + Y + G A F + + D+ +W+S
Sbjct: 242 NLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTS 301
Query: 264 LISAYALHGEARSALETFHHMEMAKVLPDDI 294
+I++ A G+ + + F M+ + PD +
Sbjct: 302 IIASLARSGDMEESFDMFWEMQNKGMHPDGV 332
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 86/415 (20%), Positives = 173/415 (41%), Gaps = 47/415 (11%)
Query: 22 LISWTKQLNSHVKQGFHQQAL--VVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAA 79
+++WT ++ HV+ G + L + H S +P L ++CS + + G
Sbjct: 192 VVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRC 251
Query: 80 IHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNC 139
+H ++K G S+ FV ++ Y K + A F E+ ++ W ++I+ S
Sbjct: 252 LHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGD 311
Query: 140 VSDALYMFDAMH---VAPDASTFNAIIAGLAG---TEDGSA-------KAIAFYWRMREL 186
+ ++ MF M + PD + +I L G A ++ Y + L
Sbjct: 312 MEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGTVCNSLLSMYCKFELL 371
Query: 187 SLKPNLITLLA----------LLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEA 236
S+ L ++ +L+ ++ + K +H ++ +D + + L++
Sbjct: 372 SVAEKLFCRISEEGNKEAWNTMLKG---YGAVLLGKSLHCYVVKTSLDLTISVVNSLIDL 428
Query: 237 YGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITF 296
YG+ G L A +F + +V+ W+++I++Y ++ A+ F M P IT
Sbjct: 429 YGKMGDLTVAWRMFCE-ADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITL 487
Query: 297 LAVLKACSHAGLADDAL---DYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIR 353
+ +L AC + G + Y + + L S + L+D+ ++ G L ++ ++
Sbjct: 488 VTLLMACVNTGSLERGQMIHRYITETEHEMNLSLS----AALIDMYAKCGHLEKSRELFD 543
Query: 354 GMPVKVTVKAWGALLGACRTYGEVELAEIAGRALF------EIEPDNPANYVLLA 402
K V W ++ +G+VE A ALF +++P P LL+
Sbjct: 544 AGNQKDAV-CWNVMISGYGMHGDVESA----IALFDQMEESDVKPTGPTFLALLS 593
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 126/300 (42%), Gaps = 43/300 (14%)
Query: 85 IKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSDAL 144
I G N FVA L+ Y + ++F + +R++ +WN++I + S+
Sbjct: 51 ITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAH-----FSNGD 105
Query: 145 YMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRACVR 204
Y A+++ F++ M P+ T ++ AC
Sbjct: 106 Y----------------------------ARSLCFFFSMLLSGQSPDHFTAPMVVSACAE 137
Query: 205 MTSLNMIKEIHGCSIRNH-IDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWSS 263
+ ++ +HG +++ D + + + V Y +CG L +A VF M +RDVVAW++
Sbjct: 138 LLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTA 197
Query: 264 LISAYALHGEARSALETFHHMEMAKV---LPDDITFLAVLKACSHAGLADDA--LDYFAR 318
+IS + +GE+ L M A P+ T +ACS+ G + L FA
Sbjct: 198 IISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAV 257
Query: 319 MQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVE 378
GL S S + S++G EAY R + + + +W +++ + G++E
Sbjct: 258 KN---GLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDE-DMFSWTSIIASLARSGDME 313
>AT3G49740.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:18447788-18450001 FORWARD
Length = 737
Score = 196 bits (499), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 124/417 (29%), Positives = 205/417 (49%), Gaps = 38/417 (9%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
L++W ++S+ + + A+ V+ + + + D + +L + + ++ +
Sbjct: 354 LVTWNTMISSYNQAKLGKSAMSVYKRMHI-IGVKPDEFTFGSLLATSLDLDVLEM---VQ 409
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVS 141
+ IK G S ++ AL+ Y K A LF+ ++N++ WNA+IS + H+
Sbjct: 410 ACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPF 469
Query: 142 DALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRA 201
+ L F + + E+ + P+ TL LL
Sbjct: 470 EGLERFSCLLES-------------------------------EVRILPDAYTLSTLLSI 498
Query: 202 CVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAW 261
CV +SL + + H +R+ + + L+ Y +CG + N+ VF M E+DVV+W
Sbjct: 499 CVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSW 558
Query: 262 SSLISAYALHGEARSALETFHHME-MAKVLPDDITFLAVLKACSHAGLADDALDYFARMQ 320
+SLISAY+ HGE +A+ T+ M+ KV+PD TF AVL ACSHAGL ++ L+ F M
Sbjct: 559 NSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSMV 618
Query: 321 QDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIR--GMPVKVTVKAWGALLGACRTYGEVE 378
+ +G+ + DH+SCLVD+L RAG L EA +++ + V W AL AC +G+++
Sbjct: 619 EFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVKISEKTIGSRVDVWWALFSACAAHGDLK 678
Query: 379 LAEIAGRALFEIEPDNPANYVLLARIYASMGRHGEAXXXXXXXXXXGVKVAPGGSWV 435
L ++ + L E E D+P+ YV L+ IYA G EA G G SW+
Sbjct: 679 LGKMVAKLLMEKEKDDPSVYVQLSNIYAGAGMWKEAEETRRAINMIGAMKQRGCSWM 735
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 80/345 (23%), Positives = 159/345 (46%), Gaps = 44/345 (12%)
Query: 25 WTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIHSHS 84
W + + G+H+ ++ +F + L + D + + +L C G +HS
Sbjct: 158 WNAMITGCKESGYHETSVELFREMH-KLGVRHDKFGFATILSMCD-YGSLDFGKQVHSLV 215
Query: 85 IKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSDAL 144
IK GF F+A ++V NA+I++Y + V DA
Sbjct: 216 IKAGF----FIASSVV---------------------------NALITMYFNCQVVVDAC 244
Query: 145 YMFDAMHVA-PDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRACV 203
+F+ VA D TFN +I GLAG + +++ + +M E SL+P +T ++++ +C
Sbjct: 245 LVFEETDVAVRDQVTFNVVIDGLAGFK--RDESLLVFRKMLEASLRPTDLTFVSVMGSC- 301
Query: 204 RMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWSS 263
+ M ++HG +I+ + + + + + Y A VF +++E+D+V W++
Sbjct: 302 --SCAAMGHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNT 359
Query: 264 LISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQDY 323
+IS+Y +SA+ + M + V PD+ TF ++L L D L+ +
Sbjct: 360 MISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLA----TSLDLDVLEMVQACIIKF 415
Query: 324 GLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALL 368
GL + + L+ S+ G++ +A D++ ++ + +W A++
Sbjct: 416 GLSSKIEISNALISAYSKNGQIEKA-DLLFERSLRKNLISWNAII 459
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 138/297 (46%), Gaps = 7/297 (2%)
Query: 16 SSNYLRLISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQ 75
+ N L++ ++L + G ++ AL +F + L D Y +SL + + + +
Sbjct: 15 AENSTTLLNLNRRLTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTI 74
Query: 76 LGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYT 135
G +H ++I+ G L + V+ L+ +Y + + S +K FDEI + +V W ++S
Sbjct: 75 FGGQVHCYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASF 134
Query: 136 HSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDG-SAKAIAFYWRMRELSLKPNLIT 194
+ A +FD M D + +NA+I G E G ++ + M +L ++ +
Sbjct: 135 KLGDIEYAFEVFDKMPERDDVAIWNAMITGCK--ESGYHETSVELFREMHKLGVRHDKFG 192
Query: 195 LLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVF--YN 252
+L C SL+ K++H I+ + + L+ Y C +++A VF +
Sbjct: 193 FATILSMC-DYGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETD 251
Query: 253 MKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLA 309
+ RD V ++ +I A S L F M A + P D+TF++V+ +CS A +
Sbjct: 252 VAVRDQVTFNVVIDGLAGFKRDESLL-VFRKMLEASLRPTDLTFVSVMGSCSCAAMG 307
>AT1G26900.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:9319756-9321474 REVERSE
Length = 572
Score = 196 bits (498), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 123/389 (31%), Positives = 192/389 (49%), Gaps = 36/389 (9%)
Query: 23 ISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIHS 82
++++ +N +++ AL +F ++ S + +LS L + S + + H
Sbjct: 193 VTFSTLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSF-LSAISDLGDLSGAESAHV 251
Query: 83 HSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSD 142
IK+G + + AL+ MYGK SAR++FD +++VV WN MI Y + + +
Sbjct: 252 LCIKIGLDLDLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEE 311
Query: 143 ALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRAC 202
+++ M Y +M KPN T + LL +C
Sbjct: 312 CVWLLRQMK----------------------------YEKM-----KPNSSTFVGLLSSC 338
Query: 203 VRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWS 262
+ + + + I L + LV+ Y + G L A +F MK++DV +W+
Sbjct: 339 AYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWT 398
Query: 263 SLISAYALHGEARSALETFHHMEMA--KVLPDDITFLAVLKACSHAGLADDALDYFARMQ 320
++IS Y HG AR A+ F+ ME KV P++ITFL VL ACSH GL + + F RM
Sbjct: 399 AMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACSHGGLVMEGIRCFKRMV 458
Query: 321 QDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVELA 380
+ Y P +HY C+VD+L RAG+L EAY++IR +P+ AW ALL ACR YG +L
Sbjct: 459 EAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPITSDSTAWRALLAACRVYGNADLG 518
Query: 381 EIAGRALFEIEPDNPANYVLLARIYASMG 409
E L E+ +PA+ +LLA +A G
Sbjct: 519 ESVMMRLAEMGETHPADAILLAGTHAVAG 547
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 90/356 (25%), Positives = 159/356 (44%), Gaps = 38/356 (10%)
Query: 39 QQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACA 98
++A VFN ++ L+LD + LKSCS +G +H +++ GF+
Sbjct: 107 ERAFSVFNQLRAK-GLTLDRFSFITTLKSCSRELCVSIGEGLHGIALRSGFM-------- 157
Query: 99 LVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDAST 158
+F ++ NA+I Y +SDA +FD M + DA T
Sbjct: 158 ----------------VFTDLR-------NALIHFYCVCGKISDARKVFDEMPQSVDAVT 194
Query: 159 FNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCS 218
F+ ++ G A A+ + MR+ + N+ TLL+ L A + L+ + H
Sbjct: 195 FSTLMNGYLQVSK-KALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLC 253
Query: 219 IRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSAL 278
I+ +D L + L+ YG+ G + +A +F +DVV W+ +I YA G +
Sbjct: 254 IKIGLDLDLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECV 313
Query: 279 ETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDV 338
M+ K+ P+ TF+ +L +C+++ A A + ++ + + + LVD+
Sbjct: 314 WLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVG-RTVADLLEEERIALDAILGTALVDM 372
Query: 339 LSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVELAEIAGRALFEIEPDN 394
++ G L +A +I M K VK+W A++ YG LA A ++E +N
Sbjct: 373 YAKVGLLEKAVEIFNRMKDK-DVKSWTAMISG---YGAHGLAREAVTLFNKMEEEN 424
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 97/229 (42%), Gaps = 35/229 (15%)
Query: 80 IHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNC 139
IH + +K G + F L+ + + A +F+ + N+ ++N MI Y+ S
Sbjct: 47 IHGYMVKTGLDKDDFAVSKLL-AFSSVLDIRYASSIFEHVSNTNLFMFNTMIRGYSIS-- 103
Query: 140 VSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALL 199
D +A + + ++R L + + + L
Sbjct: 104 -------------------------------DEPERAFSVFNQLRAKGLTLDRFSFITTL 132
Query: 200 RACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKER-DV 258
++C R +++ + +HG ++R+ LR+ L+ Y CG + +A VF M + D
Sbjct: 133 KSCSRELCVSIGEGLHGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDA 192
Query: 259 VAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAG 307
V +S+L++ Y + AL+ F M ++V+ + T L+ L A S G
Sbjct: 193 VTFSTLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFLSAISDLG 241
>AT2G34400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:14516238-14518186 FORWARD
Length = 617
Score = 196 bits (497), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 122/414 (29%), Positives = 199/414 (48%), Gaps = 38/414 (9%)
Query: 23 ISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIHS 82
+SW ++ + + G+ + A+ +F ++ D L +L +CS + + G +
Sbjct: 195 VSWNSMISGYSEAGYAKDAMDLFRKMEEE-GFEPDERTLVSMLGACSHLGDLRTGRLLEE 253
Query: 83 HSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSD 142
+I + F+ L+ MYGKC SAR++F+++ +++ V W AMI++Y+ + S+
Sbjct: 254 MAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSE 313
Query: 143 ALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRAC 202
A +F + M + + P+ TL +L AC
Sbjct: 314 AFKLF---------------------------------FEMEKTGVSPDAGTLSTVLSAC 340
Query: 203 VRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWS 262
+ +L + K+I + + + + +GLV+ YG+CG + A VF M ++ W+
Sbjct: 341 GSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWN 400
Query: 263 SLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQD 322
++I+AYA G A+ AL F M V P DITF+ VL AC HAGL YF M
Sbjct: 401 AMITAYAHQGHAKEALLLFDRM---SVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSM 457
Query: 323 YGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVELAEI 382
+GL P +HY+ ++D+LSRAG L EA++ + P K A+LGAC +V + E
Sbjct: 458 FGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAAILGACHKRKDVAIREK 517
Query: 383 AGRALFEI-EPDNPANYVLLARIYASMGRHGEAXXXXXXXXXXGVKVAPGGSWV 435
A R L E+ E N NYV+ + + A M E+ GV PG SW+
Sbjct: 518 AMRMLMEMKEAKNAGNYVISSNVLADMKMWDESAKMRALMRDRGVVKTPGCSWI 571
Score = 148 bits (374), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 104/359 (28%), Positives = 168/359 (46%), Gaps = 49/359 (13%)
Query: 15 YSSNYLRLISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRS 74
YS NY+ + T N H + AL ++ ++ S L D + + V +C+ +
Sbjct: 93 YSFNYM-IRGLTNTWNDH------EAALSLYRRMKFS-GLKPDKFTYNFVFIACAKLEEI 144
Query: 75 QLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLY 134
+G ++HS K+G + + +L+ MY KC ARKLFDEI +R+ V WN+MIS Y
Sbjct: 145 GVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGY 204
Query: 135 THSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLIT 194
+ + DA+ +F +M E +P+ T
Sbjct: 205 SEAGYAKDAMDLFR---------------------------------KMEEEGFEPDERT 231
Query: 195 LLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMK 254
L+++L AC + L + + +I I L S L+ YG+CG L +A VF M
Sbjct: 232 LVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMI 291
Query: 255 ERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALD 314
++D VAW+++I+ Y+ +G++ A + F ME V PD T VL AC G AL+
Sbjct: 292 KKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVG----ALE 347
Query: 315 YFARMQ---QDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGA 370
+++ + LQ + + LVD+ + GR+ EA + MPVK W A++ A
Sbjct: 348 LGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVK-NEATWNAMITA 405
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 136/288 (47%), Gaps = 8/288 (2%)
Query: 105 KCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIA 164
KC+S R++ ++ +V N +I + + ++F P+ +FN +I
Sbjct: 42 KCISVNQLRQIQAQMLLHSVEKPNFLIPKAVELGDFNYSSFLFSVTE-EPNHYSFNYMIR 100
Query: 165 GLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHID 224
GL T + A++ Y RM+ LKP+ T + AC ++ + + + +H + ++
Sbjct: 101 GLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLE 160
Query: 225 PHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHM 284
+ L+ Y +CG + A +F + ERD V+W+S+IS Y+ G A+ A++ F M
Sbjct: 161 RDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKM 220
Query: 285 EMAKVLPDDITFLAVLKACSHAG-LADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAG 343
E PD+ T +++L ACSH G L L + + GL S+ S L+ + + G
Sbjct: 221 EEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGL--STFLGSKLISMYGKCG 278
Query: 344 RLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVELAEIAGRALFEIE 391
L A + M K V AW A++ Y + + A + FE+E
Sbjct: 279 DLDSARRVFNQMIKKDRV-AWTAMI---TVYSQNGKSSEAFKLFFEME 322
>AT4G39530.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:18374736-18377240 REVERSE
Length = 834
Score = 195 bits (495), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 119/398 (29%), Positives = 195/398 (48%), Gaps = 39/398 (9%)
Query: 40 QALVVFNHIQTSLALSLDPYVLSLV--LKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVAC 97
+AL +F ++ L + P +L+ V L++ +++ L IH K G + F
Sbjct: 437 EALNIFRDMRFRL---IRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGS 493
Query: 98 ALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDAS 157
AL+D+Y C C+ D+ +FD M V D
Sbjct: 494 ALIDVYSNCY-------------------------------CLKDSRLVFDEMKV-KDLV 521
Query: 158 TFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGC 217
+N++ AG + + +A+ + ++ +P+ T ++ A + S+ + +E H
Sbjct: 522 IWNSMFAGYVQQSE-NEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQ 580
Query: 218 SIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSA 277
++ ++ +P + + L++ Y +CG +A F + RDVV W+S+IS+YA HGE + A
Sbjct: 581 LLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKA 640
Query: 278 LETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVD 337
L+ M + P+ ITF+ VL ACSHAGL +D L F M + +G++P ++HY C+V
Sbjct: 641 LQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLR-FGIEPETEHYVCMVS 699
Query: 338 VLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVELAEIAGRALFEIEPDNPAN 397
+L RAGRL +A ++I MP K W +LL C G VELAE A +P + +
Sbjct: 700 LLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGS 759
Query: 398 YVLLARIYASMGRHGEAXXXXXXXXXXGVKVAPGGSWV 435
+ +L+ IYAS G EA GV PG SW+
Sbjct: 760 FTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGRSWI 797
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 100/395 (25%), Positives = 193/395 (48%), Gaps = 43/395 (10%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
+ISWT L+ + + H++A+ +F + + L D Y S +L SC+++H G +H
Sbjct: 315 IISWTTLLSGYKQNALHKEAMELFTSM-SKFGLKPDMYACSSILTSCASLHALGFGTQVH 373
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVS 141
+++IK ++ +V +L+DMY KC +C++
Sbjct: 374 AYTIKANLGNDSYVTNSLIDMYAKC-------------------------------DCLT 402
Query: 142 DALYMFDAMHVAPDASTFNAIIAGLA--GTEDGSAKAIAFYWRMRELSLKPNLITLLALL 199
DA +FD + A D FNA+I G + GT+ +A+ + MR ++P+L+T ++LL
Sbjct: 403 DARKVFD-IFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLL 461
Query: 200 RACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVV 259
RA +TSL + K+IHG + ++ S L++ Y C CL ++ VF MK +D+V
Sbjct: 462 RASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLV 521
Query: 260 AWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARM 319
W+S+ + Y E AL F +++++ PD+ TF ++ A + ++ ++
Sbjct: 522 IWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQL 581
Query: 320 QQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVEL 379
+ GL+ + + L+D+ ++ G +A+ + V W +++ + +GE +
Sbjct: 582 LKR-GLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVV-CWNSVISSYANHGEGKK 639
Query: 380 A-EIAGRALFE-IEPDNPANYVLLARIYASMGRHG 412
A ++ + + E IEP NY+ + ++ G
Sbjct: 640 ALQMLEKMMSEGIEP----NYITFVGVLSACSHAG 670
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/364 (24%), Positives = 160/364 (43%), Gaps = 45/364 (12%)
Query: 23 ISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIHS 82
++WT ++ VK G +L +F + + D Y+LS VL +CS + + G IH+
Sbjct: 215 VTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVP-DGYILSTVLSACSILPFLEGGKQIHA 273
Query: 83 HSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSD 142
H ++ G + + L+D Y KC +A KLF+ +P +N++ W ++S Y
Sbjct: 274 HILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQ------ 327
Query: 143 ALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRAC 202
+A+H +A+ + M + LKP++ ++L +C
Sbjct: 328 -----NALH----------------------KEAMELFTSMSKFGLKPDMYACSSILTSC 360
Query: 203 VRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWS 262
+ +L ++H +I+ ++ + + L++ Y +C CL +A VF DVV ++
Sbjct: 361 ASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFN 420
Query: 263 SLISAYALHG---EARSALETFHHMEMAKVLPDDITFLAVLKAC---SHAGLADDALDYF 316
++I Y+ G E AL F M + P +TF+++L+A + GL+
Sbjct: 421 AMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQ----I 476
Query: 317 ARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGE 376
+ YGL S L+DV S L ++ + M VK V W ++ E
Sbjct: 477 HGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLV-IWNSMFAGYVQQSE 535
Query: 377 VELA 380
E A
Sbjct: 536 NEEA 539
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 136/285 (47%), Gaps = 35/285 (12%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIH-RSQ-LGAA 79
L+SW+ +++ G ++++LVVF + S + Y+LS +++CS + R + +
Sbjct: 110 LVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQ 169
Query: 80 IHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNC 139
+ S +K GF + +V L+D Y K + AR +FD +P+++ V W MIS C
Sbjct: 170 LQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMIS-----GC 224
Query: 140 VSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALL 199
V S ++ ++++ E ++ P+ L +L
Sbjct: 225 VKMG----------------------------RSYVSLQLFYQLMEDNVVPDGYILSTVL 256
Query: 200 RACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVV 259
AC + L K+IH +R ++ L + L+++Y +CG +I A +F M ++++
Sbjct: 257 SACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNII 316
Query: 260 AWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACS 304
+W++L+S Y + + A+E F M + PD ++L +C+
Sbjct: 317 SWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCA 361
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 130/291 (44%), Gaps = 36/291 (12%)
Query: 80 IHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNC 139
+H I G + +++ L+++Y + ARK+F+++P+RN+V W+ M+S H
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125
Query: 140 VSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALL 199
++L +F +WR R+ S PN L + +
Sbjct: 126 YEESLVVFLE------------------------------FWRTRKDS--PNEYILSSFI 153
Query: 200 RACVRMTSLN--MIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERD 257
+AC + M+ ++ +++ D + + L++ Y + G + A VF + E+
Sbjct: 154 QACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKS 213
Query: 258 VVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFA 317
V W+++IS G + +L+ F+ + V+PD VL ACS + A
Sbjct: 214 TVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHA 273
Query: 318 RMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALL 368
+ + YGL+ + + L+D + GR+ A+ + GMP K + +W LL
Sbjct: 274 HILR-YGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNK-NIISWTTLL 322
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 88/194 (45%), Gaps = 14/194 (7%)
Query: 214 IHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGE 273
+HG I ++ L + L+ Y R G ++ A VF M ER++V+WS+++SA HG
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125
Query: 274 ARSALETF-HHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHY 332
+L F K P++ + ++ACS GL D + Q + ++ D
Sbjct: 126 YEESLVVFLEFWRTRKDSPNEYILSSFIQACS--GL-DGRGRWMVFQLQSFLVKSGFDRD 182
Query: 333 ----SCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVELAEIAGRALF 388
+ L+D + G + A + +P K TV W ++ C G + ++ + +
Sbjct: 183 VYVGTLLIDFYLKDGNIDYARLVFDALPEKSTV-TWTTMISGCVKMGR---SYVSLQLFY 238
Query: 389 EIEPDN--PANYVL 400
++ DN P Y+L
Sbjct: 239 QLMEDNVVPDGYIL 252
>AT3G28660.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:10739400-10740914 REVERSE
Length = 504
Score = 194 bits (494), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 117/365 (32%), Positives = 179/365 (49%), Gaps = 40/365 (10%)
Query: 76 LGAAIHSHSIKMG-FLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLY 134
+G IH +K G FLS+ V ++ +Y + F ARK+FDEIPQ +VV W+ +++ Y
Sbjct: 134 VGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGY 193
Query: 135 THSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLIT 194
S+ L +F M V ++P+ +
Sbjct: 194 VRCGLGSEGLEVFKEMLVR---------------------------------GIEPDEFS 220
Query: 195 LLALLRACVRMTSLNMIKEIHG-CSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNM 253
+ L AC ++ +L K IH + I+ + + LV+ Y +CGC+ A VF +
Sbjct: 221 VTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKL 280
Query: 254 KERDVVAWSSLISAYALHGEARSALETFHHMEMAK-VLPDDITFLAVLKACSHAGLADDA 312
R+V +W++LI YA +G A+ A +E + PD + L VL AC+H G ++
Sbjct: 281 TRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEG 340
Query: 313 LDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACR 372
M+ YG+ P +HYSC+VD++ RAGRL +A D+I MP+K WGALL CR
Sbjct: 341 RTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCR 400
Query: 373 TYGEVELAEIAGRALFEIEPDN----PANYVLLARIYASMGRHGEAXXXXXXXXXXGVKV 428
T+ VEL E+A + L ++E N A V L+ IY S+ R+ EA G++
Sbjct: 401 THKNVELGELAVQNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEAFKVRGMIEQRGIRK 460
Query: 429 APGGS 433
PG S
Sbjct: 461 TPGWS 465
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 105/231 (45%), Gaps = 12/231 (5%)
Query: 182 RMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHI---DPHPQLRSGLVEAYG 238
+ E + P+ +T L+ AC++ ++ K+IH ++N + D H Q +G++ Y
Sbjct: 106 KEEEEDITPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDGHVQ--TGVLRIYV 163
Query: 239 RCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLA 298
L +A VF + + DVV W L++ Y G LE F M + + PD+ +
Sbjct: 164 EDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTT 223
Query: 299 VLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVK 358
L AC+ G +++ ++ + LVD+ ++ G + A ++ + +
Sbjct: 224 ALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKL-TR 282
Query: 359 VTVKAWGALLGACRTYGEVELAEIAGRALFEIEPDN---PANYVLLARIYA 406
V +W AL+G YG A+ A L IE ++ P + VLL + A
Sbjct: 283 RNVFSWAALIGGYAAYG---YAKKATTCLDRIEREDGIKPDSVVLLGVLAA 330
>AT1G34160.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:12441393-12443256 FORWARD
Length = 558
Score = 194 bits (494), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 124/382 (32%), Positives = 190/382 (49%), Gaps = 41/382 (10%)
Query: 56 LDPYVLSLVLKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKL 115
+D S LK+C+ S +H + G ++ + L+D Y K SA KL
Sbjct: 107 VDALTCSFTLKACARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKL 166
Query: 116 FDEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAK 175
FDE+P R+V WNA+I+ N S+A+ +
Sbjct: 167 FDEMPVRDVASWNALIAGLVSGNRASEAMEL----------------------------- 197
Query: 176 AIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEI-HGCSIRNHIDPHPQLRSGLV 234
Y RM ++ + +T++A L AC + + + I HG S N I + + +
Sbjct: 198 ----YKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYSNDNVI-----VSNAAI 248
Query: 235 EAYGRCGCLINASNVFYNMK-ERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDD 293
+ Y +CG + A VF ++ VV W+++I+ +A+HGEA ALE F +E + PDD
Sbjct: 249 DMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDD 308
Query: 294 ITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIR 353
+++LA L AC HAGL + L F M G++ + HY C+VD+LSRAGRL EA+DII
Sbjct: 309 VSYLAALTACRHAGLVEYGLSVFNNMACK-GVERNMKHYGCVVDLLSRAGRLREAHDIIC 367
Query: 354 GMPVKVTVKAWGALLGACRTYGEVELAEIAGRALFEIEPDNPANYVLLARIYASMGRHGE 413
M + W +LLGA Y +VE+AEIA R + E+ +N ++VLL+ +YA+ GR +
Sbjct: 368 SMSMIPDPVLWQSLLGASEIYSDVEMAEIASREIKEMGVNNDGDFVLLSNVYAAQGRWKD 427
Query: 414 AXXXXXXXXXXGVKVAPGGSWV 435
VK PG S++
Sbjct: 428 VGRVRDDMESKQVKKIPGLSYI 449
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 109/236 (46%), Gaps = 18/236 (7%)
Query: 154 PDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSL--------KPNLITLLALLRACVRM 205
P + +NAII G AG+ S ++AF W L + + +T L+AC R
Sbjct: 66 PLTNDWNAIIRGFAGS---SHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARA 122
Query: 206 TSLNMIKEIHGCSI-RNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWSSL 264
+ + ++H C I R + L + L++AY + G LI+A +F M RDV +W++L
Sbjct: 123 LCSSAMDQLH-CQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNAL 181
Query: 265 ISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQDYG 324
I+ A A+E + ME + ++T +A L ACSH G + + F D
Sbjct: 182 IAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYSNDNV 241
Query: 325 LQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVELA 380
+ ++ +D+ S+ G + +AY + K +V W ++ +GE A
Sbjct: 242 IVSNA-----AIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRA 292
>AT5G46460.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18840305-18842398 FORWARD
Length = 697
Score = 194 bits (492), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 124/417 (29%), Positives = 197/417 (47%), Gaps = 37/417 (8%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVF-NHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAI 80
+ISWT + + +AL +F N ++ + + P+ + V+ +C+ +G +
Sbjct: 190 VISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPF--TCVITACANAPAFHMGIQV 247
Query: 81 HSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCV 140
H IK+GFL +V+ +L+ Y C +RK+FDE V VW A++S Y+ +
Sbjct: 248 HGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKH 307
Query: 141 SDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLR 200
DAL +F M +R S+ PN T + L
Sbjct: 308 EDALSIFSGM--------------------------------LRN-SILPNQSTFASGLN 334
Query: 201 ACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVA 260
+C + +L+ KE+HG +++ ++ + + LV Y G + +A +VF + ++ +V+
Sbjct: 335 SCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVS 394
Query: 261 WSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQ 320
W+S+I A HG + A F M PD+ITF +L ACSH G + F M
Sbjct: 395 WNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMS 454
Query: 321 QDYG-LQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVEL 379
+ HY+C+VD+L R G+L EA ++I M VK W ALL ACR + +V+
Sbjct: 455 SGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDR 514
Query: 380 AEIAGRALFEIEPDNPANYVLLARIYASMGRHGEAXXXXXXXXXXGVKVAPGGSWVT 436
E A A+F ++ + A YVLL+ IYAS GR G+ PG SWV
Sbjct: 515 GEKAAAAIFNLDSKSSAAYVLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVV 571
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 136/325 (41%), Gaps = 43/325 (13%)
Query: 105 KCVSTFSARKLFDEIPQRNVV-------------------------------VWNAMISL 133
+C +A KLFDE+P+R+VV WN+M+
Sbjct: 109 ECGDMNTAVKLFDEMPERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVKDTAAWNSMVHG 168
Query: 134 YTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLI 193
Y V DAL +F M + ++ +I GL E S +A+ + M +K
Sbjct: 169 YLQFGKVDDALKLFKQMP-GKNVISWTTMICGLDQNER-SGEALDLFKNMLRCCIKSTSR 226
Query: 194 TLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNM 253
++ AC + +M ++HG I+ + + L+ Y C + ++ VF
Sbjct: 227 PFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEK 286
Query: 254 KERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDAL 313
V W++L+S Y+L+ + AL F M +LP+ TF + L +CS G L
Sbjct: 287 VHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALG----TL 342
Query: 314 DYFARMQQ---DYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGA 370
D+ M GL+ + + LV + S +G + +A + + K ++ +W +++
Sbjct: 343 DWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKI-FKKSIVSWNSIIVG 401
Query: 371 CRTYGEVELAEIAGRALFEI--EPD 393
C +G + A + + + EPD
Sbjct: 402 CAQHGRGKWAFVIFGQMIRLNKEPD 426
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 106/231 (45%), Gaps = 46/231 (19%)
Query: 112 ARKLFDEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTED 171
AR++F+++P +V ++ MI+ YT SN + DAL +FD M V D ++N++I+G D
Sbjct: 54 AREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVR-DVVSWNSMISGCVECGD 112
Query: 172 GSAKAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRS 231
+ A+ + M E R+ V T++ ++GC RS
Sbjct: 113 MNT-AVKLFDEMPE--------------RSVVSWTAM-----VNGC-----------FRS 141
Query: 232 GLVEAYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLP 291
G V+ A +FY M +D AW+S++ Y G+ AL+ F M V
Sbjct: 142 GKVD---------QAERLFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNV-- 190
Query: 292 DDITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRA 342
I++ ++ + +ALD F M + ++ +S ++C++ + A
Sbjct: 191 --ISWTTMICGLDQNERSGEALDLFKNMLR-CCIKSTSRPFTCVITACANA 238
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 72/146 (49%), Gaps = 14/146 (9%)
Query: 225 PHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHM 284
PH L + ++ Y R L++A N+F M RDVV+W+S+IS G+ +A++ F M
Sbjct: 64 PHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEM 123
Query: 285 EMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDH--YSCLVDVLSRA 342
V +++ A++ C +G D A F +M P D ++ +V +
Sbjct: 124 PERSV----VSWTAMVNGCFRSGKVDQAERLFYQM-------PVKDTAAWNSMVHGYLQF 172
Query: 343 GRLYEAYDIIRGMPVKVTVKAWGALL 368
G++ +A + + MP K V +W ++
Sbjct: 173 GKVDDALKLFKQMPGK-NVISWTTMI 197
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE
Length = 654
Score = 194 bits (492), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 115/415 (27%), Positives = 204/415 (49%), Gaps = 36/415 (8%)
Query: 23 ISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSL-DPYVLSLVLKSCSAIHRSQLGAAIH 81
++W+ + +V+ ++A VF + + +++ P + L+L C+ G +H
Sbjct: 272 VTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFGDLSGGRCVH 331
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVS 141
+++K GF+ + V ++ Y K S A + F EI ++V+ +N++I+ CV
Sbjct: 332 CYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLIT-----GCV- 385
Query: 142 DALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRA 201
++ P+ S + MR ++P++ TLL +L A
Sbjct: 386 --------VNCRPEES-------------------FRLFHEMRTSGIRPDITTLLGVLTA 418
Query: 202 CVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAW 261
C + +L HG + + + + + L++ Y +CG L A VF M +RD+V+W
Sbjct: 419 CSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSW 478
Query: 262 SSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQ 321
++++ + +HG + AL F+ M+ V PD++T LA+L ACSH+GL D+ F M +
Sbjct: 479 NTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSR 538
Query: 322 -DYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVELA 380
D+ + P DHY+C+ D+L+RAG L EAYD + MP + ++ G LL AC TY EL
Sbjct: 539 GDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNAELG 598
Query: 381 EIAGRALFEIEPDNPANYVLLARIYASMGRHGEAXXXXXXXXXXGVKVAPGGSWV 435
+ + + + + VLL+ Y++ R +A G+ PG SWV
Sbjct: 599 NEVSKKMQSL-GETTESLVLLSNTYSAAERWEDAARIRMIQKKRGLLKTPGYSWV 652
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 98/418 (23%), Positives = 174/418 (41%), Gaps = 76/418 (18%)
Query: 23 ISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIHS 82
I+W + ++ F ++AL ++ + S + Y VLK+C+ + G IHS
Sbjct: 69 IAWDLMIRAYASNDFAEKALDLYYKMLNS-GVRPTKYTYPFVLKACAGLRAIDDGKLIHS 127
Query: 83 HSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSD 142
H F ++ +V ALVD Y KC A K+FDE+P+R++V WNAMIS ++ C++D
Sbjct: 128 HVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTD 187
Query: 143 ALYMFDAMH----VAPDASTFNAIIAGL---AGTEDGSA--------------------- 174
+ +F M ++P+ ST + L +G A
Sbjct: 188 VIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGIL 247
Query: 175 ------KAIAFYWRMRELSLKPNLITLLAL------------------------------ 198
K I + R+ +L K N +T A+
Sbjct: 248 DVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVT 307
Query: 199 -------LRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFY 251
L C R L+ + +H +++ +++ ++ Y + G L +A F
Sbjct: 308 PVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFS 367
Query: 252 NMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSH-AGLAD 310
+ +DV++++SLI+ ++ + FH M + + PD T L VL ACSH A L
Sbjct: 368 EIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGH 427
Query: 311 DALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALL 368
+ + + Y + S + L+D+ ++ G+L A + M K + +W +L
Sbjct: 428 GSSCHGYCVVHGYAVNTSI--CNALMDMYTKCGKLDVAKRVFDTMH-KRDIVSWNTML 482
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 138/334 (41%), Gaps = 48/334 (14%)
Query: 64 VLKSCSAIHRSQLGAAIHSHSIKMGF-LSNPFVACALVDMYGKCVSTFSARKLFDEIP-- 120
+L++C LG IH H +K LS+ V L +Y C AR +FDEIP
Sbjct: 5 LLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEIPHP 64
Query: 121 QRNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFY 180
+ N + W+ MI Y + D + KA+ Y
Sbjct: 65 RINPIAWDLMIRAY---------------------------------ASNDFAEKALDLY 91
Query: 181 WRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRC 240
++M ++P T +L+AC + +++ K IH + + + LV+ Y +C
Sbjct: 92 YKMLNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKC 151
Query: 241 GCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVL-PDDITFLAV 299
G L A VF M +RD+VAW+++IS ++LH + F M L P+ T + +
Sbjct: 152 GELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGM 211
Query: 300 LKACSHAGLADDAL---DYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMP 356
A AG + Y RM G + ++DV +++ + A + +
Sbjct: 212 FPALGRAGALREGKAVHGYCTRM----GFSNDLVVKTGILDVYAKSKCIIYARRVF-DLD 266
Query: 357 VKVTVKAWGALLGACRTYGEVELAEIAGRALFEI 390
K W A++G Y E E+ + AG F++
Sbjct: 267 FKKNEVTWSAMIGG---YVENEMIKEAGEVFFQM 297
>AT4G19220.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:10505266-10508121 REVERSE
Length = 932
Score = 192 bits (489), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 117/411 (28%), Positives = 187/411 (45%), Gaps = 37/411 (9%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
L SW ++ G H ++L F + + D L + + + G H
Sbjct: 545 LTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFH 604
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVS 141
+IK + + L+ MYG+C SA K+F I N+ WN +IS + +
Sbjct: 605 GLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGR 664
Query: 142 DALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRA 201
+ +F R L L+PN IT + LL A
Sbjct: 665 EVFQLF------------------------------------RNLKLEPNEITFVGLLSA 688
Query: 202 CVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAW 261
++ S + + H IR +P + + LV+ Y CG L VF N + AW
Sbjct: 689 STQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFRNSGVNSISAW 748
Query: 262 SSLISAYALHGEARSALETFHHMEM-AKVLPDDITFLAVLKACSHAGLADDALDYFARMQ 320
+S+ISA+ HG A+E F + +++ P+ +F+++L ACSH+G D+ L Y+ +M+
Sbjct: 749 NSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFISLLSACSHSGFIDEGLSYYKQME 808
Query: 321 QDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVELA 380
+ +G++P ++H +VD+L RAG+L EAY+ I G+ WGALL AC +G+ +L
Sbjct: 809 EKFGVKPVTEHRVWIVDMLGRAGKLREAYEFITGIGEPQKAGVWGALLSACNYHGDTKLG 868
Query: 381 EIAGRALFEIEPDNPANYVLLARIYASMGRHGEAXXXXXXXXXXGVKVAPG 431
+ LFE+EPDN + Y+ LA Y +G EA +K PG
Sbjct: 869 KEVAEVLFEMEPDNASYYISLANTYVGLGGWEEAVRLRKMVEDNALKKLPG 919
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 101/440 (22%), Positives = 189/440 (42%), Gaps = 66/440 (15%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
+IS LN G ++A + N +Q+ + D + + C + S+ G A+H
Sbjct: 357 VISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVH 416
Query: 82 SHSIKMGFLSNPF-VACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCV 140
++++M S V +++DMYGKC T A LF R++V WN+MIS ++ +
Sbjct: 417 GYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFT 476
Query: 141 SDALYMF----------------------------------------------------- 147
A +F
Sbjct: 477 HKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQKLGDLTSAFLRL 536
Query: 148 DAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRACVRMTS 207
+ M D +++N++I+G A + AF RE ++ +LITLL + A +
Sbjct: 537 ETMSETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGL 596
Query: 208 LNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWSSLISA 267
+ + HG +I++ + QL++ L+ YGRC + +A VF + + ++ +W+ +ISA
Sbjct: 597 VLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISA 656
Query: 268 YALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQDYGLQP 327
+ + R + F ++ K+ P++ITF+ +L A + G + + + G Q
Sbjct: 657 LSQNKAGREVFQLFRNL---KLEPNEITFVGLLSASTQLGSTSYGMQAHCHLIR-RGFQA 712
Query: 328 SSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVELA-----EI 382
+ + LVD+ S G L + R V ++ AW +++ A +G E A E+
Sbjct: 713 NPFVSAALVDMYSSCGMLETGMKVFRNSGVN-SISAWNSVISAHGFHGMGEKAMELFKEL 771
Query: 383 AGRALFEIEPDNPANYVLLA 402
+ + E+EP+ + LL+
Sbjct: 772 SSNS--EMEPNKSSFISLLS 789
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/359 (20%), Positives = 152/359 (42%), Gaps = 58/359 (16%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
++SW + + G +++L F + T D S V+ +CS+I LG ++H
Sbjct: 254 IVSWNTIMTKCLANGHPRKSLQYFKSM-TGSGQEADTVTFSCVISACSSIEELTLGESLH 312
Query: 82 SHSIKMGFLSNPFVAC--ALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNC 139
IK G+ V+ +++ MY KC T +A +F+E+ R+V+ NA+++ + +
Sbjct: 313 GLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGM 372
Query: 140 VSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALL 199
+A + + M ++P++ T++++
Sbjct: 373 FEEAFGILNQMQSVDK--------------------------------IQPDIATVVSIT 400
Query: 200 RACVRMTSLNMIKEIHGCSIRNHIDPHP-QLRSGLVEAYGRCGCLINASNVFYNMKERDV 258
C ++ + +HG ++R + ++ + +++ YG+CG A +F RD+
Sbjct: 401 SICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDL 460
Query: 259 VAWSSLISAYALHGEARSALETFHHM--EMAKVLPDDITFLAVLKACSHAGLADDALDYF 316
V+W+S+ISA++ +G A F + E + T LA+L +C + D+L +
Sbjct: 461 VSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCD----SSDSLIFG 516
Query: 317 ARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYG 375
+ C L + G L A+ + M + +W +++ C + G
Sbjct: 517 KSVH-------------CW---LQKLGDLTSAFLRLETMSETRDLTSWNSVISGCASSG 559
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/298 (18%), Positives = 129/298 (43%), Gaps = 45/298 (15%)
Query: 80 IHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNC 139
+H +I+ G + + + AL+++Y K + SA +F + R++V WN +++ C
Sbjct: 210 LHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMT-----KC 264
Query: 140 VSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALL 199
+++ K++ ++ M + + +T ++
Sbjct: 265 LANG----------------------------HPRKSLQYFKSMTGSGQEADTVTFSCVI 296
Query: 200 RACVRMTSLNMIKEIHGCSIRNHIDP--HPQLRSGLVEAYGRCGCLINASNVFYNMKERD 257
AC + L + + +HG I++ P H + + ++ Y +CG A VF + RD
Sbjct: 297 SACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRD 356
Query: 258 VVAWSSLISAYALHGEARSALETFHHME-MAKVLPDDITFLAVLKACSHAGLADDAL--- 313
V++ +++++ +A +G A + M+ + K+ PD T +++ C + +
Sbjct: 357 VISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVH 416
Query: 314 DYFARMQ-QDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGA 370
Y RM+ Q L+ + ++D+ + G +A + + + V +W +++ A
Sbjct: 417 GYTVRMEMQSRALEV----INSVIDMYGKCGLTTQAELLFKTTTHRDLV-SWNSMISA 469
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 108/244 (44%), Gaps = 39/244 (15%)
Query: 64 VLKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRN 123
VL+S ++ ++H ++K G L + + L+ YG+ S+ LFDE+ +++
Sbjct: 93 VLRSFMMRTETETPRSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKD 152
Query: 124 VVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRM 183
V+VW N++I L + + + IA
Sbjct: 153 VIVW--------------------------------NSMITAL----NQNGRYIAAVGLF 176
Query: 184 RELSLKPNLITLLALLRACVRMTSLNMIKE---IHGCSIRNHIDPHPQLRSGLVEAYGRC 240
E+ K N LL A ++SL++ ++ +H +I + L + L+ Y +
Sbjct: 177 IEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNALMNLYAKG 236
Query: 241 GCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVL 300
L +A VF +M+ RD+V+W+++++ +G R +L+ F M + D +TF V+
Sbjct: 237 ENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVI 296
Query: 301 KACS 304
ACS
Sbjct: 297 SACS 300
>AT3G02010.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:337965-340442 FORWARD
Length = 825
Score = 192 bits (488), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 121/417 (29%), Positives = 196/417 (47%), Gaps = 35/417 (8%)
Query: 20 LRLISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAA 79
L +S+ ++S+ + ++ +L F +Q + + + +L + + Q+G
Sbjct: 314 LDFVSYNVVISSYSQADQYEASLHFFREMQC-MGFDRRNFPFATMLSIAANLSSLQMGRQ 372
Query: 80 IHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNC 139
+H ++ S V +LVDMY KC A +F +PQR V W A+IS Y
Sbjct: 373 LHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQK-- 430
Query: 140 VSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALL 199
GL G + + +MR +L+ + T +L
Sbjct: 431 -------------------------GLHGA------GLKLFTKMRGSNLRADQSTFATVL 459
Query: 200 RACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVV 259
+A SL + K++H IR+ + SGLV+ Y +CG + +A VF M +R+ V
Sbjct: 460 KASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAV 519
Query: 260 AWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARM 319
+W++LISA+A +G+ +A+ F M + + PD ++ L VL ACSH G + +YF M
Sbjct: 520 SWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAM 579
Query: 320 QQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVEL 379
YG+ P HY+C++D+L R GR EA ++ MP + W ++L ACR + L
Sbjct: 580 SPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSL 639
Query: 380 AEIAGRALFEIEP-DNPANYVLLARIYASMGRHGEAXXXXXXXXXXGVKVAPGGSWV 435
AE A LF +E + A YV ++ IYA+ G + G+K P SWV
Sbjct: 640 AERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWV 696
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/377 (23%), Positives = 161/377 (42%), Gaps = 44/377 (11%)
Query: 23 ISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIHS 82
+++ + + K G + +++ +F ++ S D + S VLK+ +H LG +H+
Sbjct: 216 VTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSD-FTFSGVLKAVVGLHDFALGQQLHA 274
Query: 83 HSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSD 142
S+ GF + V ++D Y K R LFDE+P+ + V +N +IS Y+ ++
Sbjct: 275 LSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEA 334
Query: 143 ALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRAC 202
+L+ F+ M+ + +L
Sbjct: 335 SLH---------------------------------FFREMQCMGFDRRNFPFATMLSIA 361
Query: 203 VRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWS 262
++SL M +++H ++ D + + LV+ Y +C A +F ++ +R V+W+
Sbjct: 362 ANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWT 421
Query: 263 SLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAG---LADDALDYFARM 319
+LIS Y G + L+ F M + + D TF VLKA + L + R
Sbjct: 422 ALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIR- 480
Query: 320 QQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVEL 379
G + S LVD+ ++ G + +A + MP + V +W AL+ A G+ E
Sbjct: 481 ---SGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAV-SWNALISAHADNGDGEA 536
Query: 380 AEIAGRALFE--IEPDN 394
A A + E ++PD+
Sbjct: 537 AIGAFAKMIESGLQPDS 553
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 125/278 (44%), Gaps = 11/278 (3%)
Query: 85 IKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSDAL 144
IK GF ++ + +V+ + +ARK++DE+P +N V N MIS + + VS A
Sbjct: 40 IKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTGDVSSAR 99
Query: 145 YMFDAMHVAPDASTFN-AIIAGLAGTEDGSAKAIAFYWRM-RELSLK-PNLITLLALLRA 201
+FDAM PD + I+ G +A + +M R S P+ +T LL
Sbjct: 100 DLFDAM---PDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPG 156
Query: 202 CVRMTSLNMIKEIHGCSIRNHIDPHPQLRSG--LVEAYGRCGCLINASNVFYNMKERDVV 259
C N + ++H +++ D +P L L+++Y L A +F + E+D V
Sbjct: 157 CNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSV 216
Query: 260 AWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDAL-DYFAR 318
+++LI+ Y G ++ F M + P D TF VLKA GL D AL
Sbjct: 217 TFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAV--VGLHDFALGQQLHA 274
Query: 319 MQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMP 356
+ G + + ++D S+ R+ E + MP
Sbjct: 275 LSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMP 312
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/354 (20%), Positives = 157/354 (44%), Gaps = 42/354 (11%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYV-LSLVLKSCS-AIHRSQLGAA 79
+++WT + + + +A +F + S + +L +V + +L C+ A+ ++ +G
Sbjct: 110 VVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQ- 168
Query: 80 IHSHSIKMGFLSNPF--VACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHS 137
+H+ ++K+GF +NPF V+ L+ Y + A LF+EIP+++ V +N +I+ Y
Sbjct: 169 VHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKD 228
Query: 138 NCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLA 197
++++++F +MR+ +P+ T
Sbjct: 229 GLYTESIHLF---------------------------------LKMRQSGHQPSDFTFSG 255
Query: 198 LLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERD 257
+L+A V + + +++H S+ + + +++ Y + ++ +F M E D
Sbjct: 256 VLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELD 315
Query: 258 VVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFA 317
V+++ +IS+Y+ + ++L F M+ + F +L A L+ +
Sbjct: 316 FVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIA--ANLSSLQMGRQL 373
Query: 318 RMQQDYGLQPSSDHY-SCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGA 370
Q S H + LVD+ ++ EA I + +P + TV +W AL+
Sbjct: 374 HCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTV-SWTALISG 426
>AT4G20770.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:11130762-11132984 REVERSE
Length = 740
Score = 192 bits (488), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 114/414 (27%), Positives = 194/414 (46%), Gaps = 34/414 (8%)
Query: 24 SWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIHSH 83
+W L+ + +++A+ F +Q L D LS++L SC+ + + G IH
Sbjct: 349 AWNAMLSGYSNYEHYEEAISNFRQMQFQ-NLKPDKTTLSVILSSCARLRFLEGGKQIHGV 407
Query: 84 SIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDE-IPQRNVVVWNAMISLYTHSNCVSD 142
I+ N + L+ +Y +C + +FD+ I + ++ WN+MIS + H+ +
Sbjct: 408 VIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTK 467
Query: 143 ALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRAC 202
AL +F MH + L PN + +L +C
Sbjct: 468 ALILFRRMH--------------------------------QTAVLCPNETSFATVLSSC 495
Query: 203 VRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWS 262
R+ SL ++ HG +++ + + L + Y +CG + +A F + ++ V W+
Sbjct: 496 SRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWN 555
Query: 263 SLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQD 322
+I Y +G A+ + M + PD ITF++VL ACSH+GL + L+ + MQ+
Sbjct: 556 EMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRI 615
Query: 323 YGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVELAEI 382
+G++P DHY C+VD L RAGRL +A + P K + W LL +CR +G+V LA
Sbjct: 616 HGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSLARR 675
Query: 383 AGRALFEIEPDNPANYVLLARIYASMGRHGEAXXXXXXXXXXGVKVAPGGSWVT 436
L ++P + A YVLL+ Y+S+ + ++ V PG SW T
Sbjct: 676 VAEKLMRLDPQSSAAYVLLSNTYSSLRQWDDSAALQGLMNKNRVHKTPGQSWTT 729
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 128/275 (46%), Gaps = 37/275 (13%)
Query: 67 SCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVV 126
S S I+ ++LG IH ++++GF + + +L+++Y K A +F E+P+ NVV
Sbjct: 224 SLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVS 283
Query: 127 WNAMISLYTHS-----------------------NCVSDALYMFDAMHVA---------- 153
WN MI + C+S F + V
Sbjct: 284 WNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIP 343
Query: 154 -PDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIK 212
P S +NA+++G + E +AI+ + +M+ +LKP+ TL +L +C R+ L K
Sbjct: 344 QPSVSAWNAMLSGYSNYEH-YEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGK 402
Query: 213 EIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYN-MKERDVVAWSSLISAYALH 271
+IHG IR I + + SGL+ Y C + + +F + + E D+ W+S+IS + +
Sbjct: 403 QIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHN 462
Query: 272 GEARSALETFHHMEMAKVL-PDDITFLAVLKACSH 305
AL F M VL P++ +F VL +CS
Sbjct: 463 MLDTKALILFRRMHQTAVLCPNETSFATVLSSCSR 497
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 116/279 (41%), Gaps = 50/279 (17%)
Query: 18 NYLRLISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLG 77
N L + W ++ +AL++F + + L + + VL SCS + G
Sbjct: 445 NELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHG 504
Query: 78 AAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHS 137
H +K G++S+ FV AL DMY KC SAR+ FD + ++N V+WN MI Y H+
Sbjct: 505 RQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHN 564
Query: 138 NCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLA 197
G D +A+ Y +M KP+ IT ++
Sbjct: 565 ------------------------------GRGD---EAVGLYRKMISSGEKPDGITFVS 591
Query: 198 LLRAC-------VRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVF 250
+L AC + L+ ++ IHG I+P +V+ GR G L +A +
Sbjct: 592 VLTACSHSGLVETGLEILSSMQRIHG------IEPELDHYICIVDCLGRAGRLEDAEKLA 645
Query: 251 YNMK-ERDVVAWSSLISAYALHGE---ARSALETFHHME 285
+ V W L+S+ +HG+ AR E ++
Sbjct: 646 EATPYKSSSVLWEILLSSCRVHGDVSLARRVAEKLMRLD 684
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/347 (21%), Positives = 150/347 (43%), Gaps = 49/347 (14%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
++SW ++ V++GF ++ALVV+ + L + L+ VL +CS + G H
Sbjct: 69 VVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLP-SRFTLASVLSACSKVLDGVFGMRCH 127
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVS 141
++K G +N+ V NA++S+Y +
Sbjct: 128 GVAVKTGL-------------------------------DKNIFVGNALLSMYAKCGFIV 156
Query: 142 D-ALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLK------PNLIT 194
D + +F+++ P+ ++ A+I GLA E+ +A+ + M E ++ N+++
Sbjct: 157 DYGVRVFESLS-QPNEVSYTAVIGGLA-RENKVLEAVQMFRLMCEKGVQVDSVCLSNILS 214
Query: 195 LLALLRACVRMTSL---NMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFY 251
+ A C ++ + + K+IH ++R L + L+E Y + + A +F
Sbjct: 215 ISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFA 274
Query: 252 NMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADD 311
M E +VV+W+ +I + + ++E M + P+++T ++VL AC +G +
Sbjct: 275 EMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVET 334
Query: 312 ALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVK 358
F+ + QPS ++ ++ S EA R M +
Sbjct: 335 GRRIFSSIP-----QPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQ 376
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 108/217 (49%), Gaps = 7/217 (3%)
Query: 87 MGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSDALYM 146
MG S+ ++ L+D+Y +C ARK+FDE+ R+V WNA ++ + +A +
Sbjct: 1 MGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCKVGDLGEACEV 60
Query: 147 FDAMHVAPDASTFNAIIAGLA--GTEDGSAKAIAFYWRMRELSLKPNLITLLALLRACVR 204
FD M D ++N +I+ L G E+ KA+ Y RM P+ TL ++L AC +
Sbjct: 61 FDGMP-ERDVVSWNNMISVLVRKGFEE---KALVVYKRMVCDGFLPSRFTLASVLSACSK 116
Query: 205 MTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLIN-ASNVFYNMKERDVVAWSS 263
+ HG +++ +D + + + L+ Y +CG +++ VF ++ + + V++++
Sbjct: 117 VLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTA 176
Query: 264 LISAYALHGEARSALETFHHMEMAKVLPDDITFLAVL 300
+I A + A++ F M V D + +L
Sbjct: 177 VIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNIL 213
>AT3G28640.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:10731518-10732723 REVERSE
Length = 401
Score = 192 bits (488), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 116/365 (31%), Positives = 179/365 (49%), Gaps = 40/365 (10%)
Query: 76 LGAAIHSHSIKMG-FLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLY 134
+G IH +K G FLS+ V ++ +Y + ARK+FDEIPQ +VV W+ +++ Y
Sbjct: 31 VGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGY 90
Query: 135 THSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLIT 194
S+ L +F M V L+P+ +
Sbjct: 91 VRCGLGSEGLEVFREMLVK---------------------------------GLEPDEFS 117
Query: 195 LLALLRACVRMTSLNMIKEIHG-CSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNM 253
+ L AC ++ +L K IH ++ I+ + + LV+ Y +CGC+ A VF +
Sbjct: 118 VTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKL 177
Query: 254 KERDVVAWSSLISAYALHGEARSALETFHHMEMAK-VLPDDITFLAVLKACSHAGLADDA 312
R+V +W++LI YA +G A+ A+ +E + PD + L VL AC+H G ++
Sbjct: 178 TRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEG 237
Query: 313 LDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACR 372
M+ Y + P +HYSC+VD++ RAGRL +A ++I MP+K WGALL CR
Sbjct: 238 RSMLENMEARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCR 297
Query: 373 TYGEVELAEIAGRALFEIEPDN----PANYVLLARIYASMGRHGEAXXXXXXXXXXGVKV 428
T+ VEL E+A + L ++E N A V L+ IY S+ R+ EA GV+
Sbjct: 298 THKNVELGELAVKNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEASKVRGMIEQRGVRK 357
Query: 429 APGGS 433
PG S
Sbjct: 358 TPGWS 362
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 103/228 (45%), Gaps = 6/228 (2%)
Query: 182 RMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHI---DPHPQLRSGLVEAYG 238
+ E + P+ +T L+ AC++ ++ K+IH ++N + D H Q +G++ Y
Sbjct: 3 KEEEEDIAPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDSHVQ--TGVLRIYV 60
Query: 239 RCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLA 298
L++A VF + + DVV W L++ Y G LE F M + + PD+ +
Sbjct: 61 EDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTT 120
Query: 299 VLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVK 358
L AC+ G +++ ++ + LVD+ ++ G + A ++ + + +
Sbjct: 121 ALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKL-TR 179
Query: 359 VTVKAWGALLGACRTYGEVELAEIAGRALFEIEPDNPANYVLLARIYA 406
V +W AL+G YG + A L + P + VLL + A
Sbjct: 180 RNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAA 227
>AT4G04370.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:2134060-2136249 REVERSE
Length = 729
Score = 192 bits (488), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 115/415 (27%), Positives = 210/415 (50%), Gaps = 35/415 (8%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
++ WT ++ ++ G ++AL+VF+ + S L ++ V+ SC+ + LGA++H
Sbjct: 311 VVCWTVMISGLMRLGRAEKALIVFSEMLQS-GSDLSSEAIASVVASCAQLGSFDLGASVH 369
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVS 141
+ ++ G+ + +L+ MY KC + +F+ + +R++V W
Sbjct: 370 GYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSW-------------- 415
Query: 142 DALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKP-NLITLLALLR 200
NAII+G A D KA+ + M+ +++ + T+++LL+
Sbjct: 416 ------------------NAIISGYAQNVD-LCKALLLFEEMKFKTVQQVDSFTVVSLLQ 456
Query: 201 ACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVA 260
AC +L + K IH IR+ I P + + LV+ Y +CG L A F ++ +DVV+
Sbjct: 457 ACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVS 516
Query: 261 WSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQ 320
W LI+ Y HG+ ALE + + + P+ + FLAVL +CSH G+ L F+ M
Sbjct: 517 WGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMV 576
Query: 321 QDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVELA 380
+D+G++P+ +H +C+VD+L RA R+ +A+ + + ++ G +L ACR G+ E+
Sbjct: 577 RDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYKENFTRPSIDVLGIILDACRANGKTEVE 636
Query: 381 EIAGRALFEIEPDNPANYVLLARIYASMGRHGEAXXXXXXXXXXGVKVAPGGSWV 435
+I + E++P + +YV L +A+M R + G+K PG S +
Sbjct: 637 DIICEDMIELKPGDAGHYVKLGHSFAAMKRWDDVSESWNQMRSLGLKKLPGWSKI 691
Score = 115 bits (287), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 92/373 (24%), Positives = 163/373 (43%), Gaps = 45/373 (12%)
Query: 26 TKQLNSHVKQ----GFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
TK NSH+ G H+Q L F+ + + L D + +LK+C+++ R G +IH
Sbjct: 11 TKYFNSHINHLSSHGDHKQVLSTFSSMLANKLLP-DTFTFPSLLKACASLQRLSFGLSIH 69
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVS 141
+ GF S+ +++ +LV++Y K ARK+F+E+ +R+VV W AMI Y+
Sbjct: 70 QQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSR----- 124
Query: 142 DALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRA 201
AG+ G +A + MR +KP +TLL +L
Sbjct: 125 ----------------------AGIVG------EACSLVNEMRFQGIKPGPVTLLEMLSG 156
Query: 202 CVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAW 261
+ +T L + H ++ D + + ++ Y +C + +A ++F M++RD+V+W
Sbjct: 157 VLEITQLQCL---HDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSW 213
Query: 262 SSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQ- 320
+++IS YA G L+ + M + PD TF A L + D + Q
Sbjct: 214 NTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSV--SGTMCDLEMGRMLHCQI 271
Query: 321 QDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVELA 380
G + L+ + + G+ +Y ++ +P K V W ++ G E A
Sbjct: 272 VKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVV-CWTVMISGLMRLGRAEKA 330
Query: 381 EIAGRALFEIEPD 393
I + + D
Sbjct: 331 LIVFSEMLQSGSD 343
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 95/394 (24%), Positives = 171/394 (43%), Gaps = 43/394 (10%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
++SW ++ + G + L + ++ L D L + ++G +H
Sbjct: 210 MVSWNTMISGYASVGNMSEILKLLYRMRGD-GLRPDQQTFGASLSVSGTMCDLEMGRMLH 268
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVS 141
+K GF + + AL+ MY KC ++ ++ + IP ++VV W MIS
Sbjct: 269 CQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAE 328
Query: 142 DALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRA 201
AL +F M L D S++AIA +++ +
Sbjct: 329 KALIVFSEM---------------LQSGSDLSSEAIA------------------SVVAS 355
Query: 202 CVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAW 261
C ++ S ++ +HG +R+ + L+ Y +CG L + +F M ERD+V+W
Sbjct: 356 CAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSW 415
Query: 262 SSLISAYALHGEARSALETFHHMEMAKVLP-DDITFLAVLKACSHAGLADDALDYFARMQ 320
+++IS YA + + AL F M+ V D T +++L+ACS AG +
Sbjct: 416 NAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVI 475
Query: 321 QDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVELA 380
+ + ++P S + LVD+ S+ G L A + K V +WG L+ +G+ ++A
Sbjct: 476 RSF-IRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVV-SWGILIAGYGFHGKGDIA 533
Query: 381 -EIAGRALFE-IEPDNPANYVLLARIYASMGRHG 412
EI L +EP N+V+ + +S +G
Sbjct: 534 LEIYSEFLHSGMEP----NHVIFLAVLSSCSHNG 563
>AT5G19020.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:6352771-6357083 REVERSE
Length = 939
Score = 192 bits (487), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 117/392 (29%), Positives = 204/392 (52%), Gaps = 5/392 (1%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
++SW ++ +++ +ALV + + + ++ L+ S ++ S+ G +H
Sbjct: 524 IVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSK-GLQLH 582
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVS 141
+K GF F+ ++ Y A + F+ + ++ NA+I+ + + V
Sbjct: 583 GTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVE 642
Query: 142 DALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRA 201
A +FD H D ++NA+I+G A + F + +KP+ IT++++ A
Sbjct: 643 QAREVFDQTH-DKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSA 701
Query: 202 CVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFY---NMKERDV 258
+ SL K H + I P+ L + +++ Y +CG + A N+F+ N+ +
Sbjct: 702 ISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTI 761
Query: 259 VAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFAR 318
W+++I A HG A+ AL+ + ++ + P+ ITF+ VL AC HAGL + YF
Sbjct: 762 SPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFES 821
Query: 319 MQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVE 378
M+ D+G++P HY C+VD+L +AGRL EA ++I+ MPVK V WG LL A RT+G VE
Sbjct: 822 MKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMPVKADVMIWGMLLSASRTHGNVE 881
Query: 379 LAEIAGRALFEIEPDNPANYVLLARIYASMGR 410
+AE+A L I+P + V+L+ +YA GR
Sbjct: 882 IAELAATELAAIDPSHGGCKVMLSNVYADAGR 913
Score = 121 bits (304), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 94/396 (23%), Positives = 181/396 (45%), Gaps = 46/396 (11%)
Query: 23 ISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIHS 82
+S+T + + + +A+ +F ++ +L + L+ L+ V+ +CS + + S
Sbjct: 393 VSYTTLIKGYAQNNQWSEAMELFREMR-NLGIMLNEVTLATVISACSHLGGIWDCRMLQS 451
Query: 83 HSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSD 142
+IK+ FV+ L+ MY C+ ARKLFDE+P+RN+V WN M++ Y+ + +
Sbjct: 452 LAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQ 511
Query: 143 ALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRAC 202
A +FD + D ++ +I G ++ +A+ +Y M +KP+ + ++ LL A
Sbjct: 512 AEELFDQI-TEKDIVSWGTMIDGCL-RKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSAS 569
Query: 203 VRMTSLNMIKEIHGCSIRNHID-------------------------------PHPQLRS 231
R + ++HG ++ D H R+
Sbjct: 570 ARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRN 629
Query: 232 GLVEAYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHM-EMAKVL 290
L+ + + G + A VF ++D+ +W+++IS YA + AL F M ++V
Sbjct: 630 ALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVK 689
Query: 291 PDDITFLAVLKACSHAGLADD---ALDYFARMQQDYGLQPSSDHYS-CLVDVLSRAGRLY 346
PD IT ++V A S G ++ A DY ++ P +D+ + ++D+ ++ G +
Sbjct: 690 PDAITMVSVFSAISSLGSLEEGKRAHDYL-----NFSTIPPNDNLTAAIIDMYAKCGSIE 744
Query: 347 EAYDIIRGMP--VKVTVKAWGALLGACRTYGEVELA 380
A +I T+ W A++ T+G +LA
Sbjct: 745 TALNIFHQTKNISSSTISPWNAIICGSATHGHAKLA 780
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 137/282 (48%), Gaps = 14/282 (4%)
Query: 65 LKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNV 124
L SC++ + G IH +K G SN ++ ++++MY KC A +F + + +
Sbjct: 302 LGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAKLDS 361
Query: 125 VVWNAMISLYTHSNCVSDALYMFDAMHVAPDAS--TFNAIIAGLAGTEDGSAKAIAFYWR 182
+N M+ Y S + DAL +FD M P+ S ++ +I G A S +A+ +
Sbjct: 362 ASFNIMVDGYVRSRRLWDALKLFDVM---PERSCVSYTTLIKGYAQNNQWS-EAMELFRE 417
Query: 183 MRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGC 242
MR L + N +TL ++ AC + + + + +I+ ++ + + L+ Y C C
Sbjct: 418 MRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLC 477
Query: 243 LINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKA 302
L +A +F M ER++V W+ +++ Y+ G A E F + D +++ ++
Sbjct: 478 LKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQI----TEKDIVSWGTMIDG 533
Query: 303 CSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGR 344
C D+AL Y+ M + G++PS +VD+LS + R
Sbjct: 534 CLRKNQLDEALVYYTEMLR-CGMKPSE---VMMVDLLSASAR 571
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 70/159 (44%), Gaps = 22/159 (13%)
Query: 233 LVEAYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPD 292
+V+ Y R L +A +F M ER V++++LI YA + + A+E F M ++ +
Sbjct: 367 MVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIMLN 426
Query: 293 DITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSD----------HYSCLVDVLSRA 342
++T V+ ACSH G D RM Q ++ + H CL L A
Sbjct: 427 EVTLATVISACSHLGGIWD-----CRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDA 481
Query: 343 GRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVELAE 381
+L++ MP + V W +L G +E AE
Sbjct: 482 RKLFDE------MPERNLV-TWNVMLNGYSKAGLIEQAE 513
>AT3G05240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:1493684-1495381 REVERSE
Length = 548
Score = 191 bits (486), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 134/446 (30%), Positives = 201/446 (45%), Gaps = 61/446 (13%)
Query: 25 WTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIHSHS 84
W + + +AL+ + + S D + VLK+CS + Q G+ +H
Sbjct: 75 WNSMIRGYSNSPNPDKALIFYQEMLRK-GYSPDYFTFPYVLKACSGLRDIQFGSCVHGFV 133
Query: 85 IKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSDAL 144
+K GF N +V+ L+ MY C ++F++IPQ NVV W ++IS + ++N SDA+
Sbjct: 134 VKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAI 193
Query: 145 YMFDAMH---VAPDAST---------------------FNAIIA----------GLAGTE 170
F M V + + FN I+A G T
Sbjct: 194 EAFREMQSNGVKANETIMVDLLVACGRCFDPYFQSKVGFNVILATSLIDMYAKCGDLRTA 253
Query: 171 ----DGSAKAIAFYWRMRELSLKPN---------LITLLALLRACVRMTSLNMIKE--IH 215
DG + W N + +L L A ++T L++I+ I
Sbjct: 254 RYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQ 313
Query: 216 GCSIRNHIDPHPQLRSGLVE----------AYGRCGCLINASNVFYNMKERDVVAWSSLI 265
GCS ++G V+ Y + G +A F +++++D +AW+ +I
Sbjct: 314 GCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVI 373
Query: 266 SAYALHGEARSALETFHHM-EMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQDYG 324
A HG AL F M E PD IT+L VL ACSH GL ++ YFA M+ +G
Sbjct: 374 IGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHG 433
Query: 325 LQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVELAEIAG 384
L+P+ +HY C+VD+LSRAGR EA +++ MPVK V WGALL C + +EL +
Sbjct: 434 LEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNGCDIHENLELTDRIR 493
Query: 385 RALFEIEPDNPANYVLLARIYASMGR 410
+ E E YVLL+ IYA GR
Sbjct: 494 SMVAEPEELGSGIYVLLSNIYAKAGR 519
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 126/304 (41%), Gaps = 47/304 (15%)
Query: 80 IHSHSIKMGFLSNPFVACALVDMYGKCVSTFS---ARKLFDEIPQRNVVVWNAMISLYTH 136
+H IK + N L+D C T + AR +F+ I +V +WN+MI Y++
Sbjct: 25 LHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESIDCPSVYIWNSMIRGYSN 84
Query: 137 SNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLL 196
S PD KA+ FY M P+ T
Sbjct: 85 SP--------------NPD-------------------KALIFYQEMLRKGYSPDYFTFP 111
Query: 197 ALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKER 256
+L+AC + + +HG ++ + + + + L+ Y CG + VF ++ +
Sbjct: 112 YVLKACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQW 171
Query: 257 DVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYF 316
+VVAW SLIS + + A+E F M+ V ++ + +L AC D +
Sbjct: 172 NVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGR------CFDPY 225
Query: 317 ARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGE 376
+ + + + ++ L+D+ ++ G L A + GMP + T+ +W +++ G+
Sbjct: 226 FQSKVGFNVILATS----LIDMYAKCGDLRTARYLFDGMPER-TLVSWNSIITGYSQNGD 280
Query: 377 VELA 380
E A
Sbjct: 281 AEEA 284
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 122/260 (46%), Gaps = 35/260 (13%)
Query: 5 AKLNQLRIMSYSSNYL---RLISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVL 61
AK LR Y + + L+SW + + + G ++AL +F + L ++ D
Sbjct: 245 AKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDM-LDLGIAPDKVTF 303
Query: 62 SLVLKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQ 121
V+++ SQLG +IH++ K GF+ + + CALV+MY K SA+K F+++ +
Sbjct: 304 LSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEK 363
Query: 122 RNVVVWN-AMISLYTHSNCVSDALYMFDAM----HVAPDASTFNAII---AGLAGTEDGS 173
++ + W +I L +H + ++AL +F M + PD T+ ++ + + E+G
Sbjct: 364 KDTIAWTVVIIGLASHGHG-NEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQ 422
Query: 174 AKAIAFYWRMREL-SLKP---------NLITLLALLRACVRMTSLNMIKE--------IH 215
++ MR+L L+P ++++ R+ +K ++
Sbjct: 423 ----RYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLN 478
Query: 216 GCSIRNHIDPHPQLRSGLVE 235
GC I +++ ++RS + E
Sbjct: 479 GCDIHENLELTDRIRSMVAE 498
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD
Length = 761
Score = 190 bits (483), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 138/457 (30%), Positives = 215/457 (47%), Gaps = 46/457 (10%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSL-ALSLDPYVLSLVLKSCSA--IHRSQLGA 78
++SWT ++ +++AL++F ++ + A+S + L + +C + +LG
Sbjct: 262 IVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGE 321
Query: 79 AIHSHSIKMGFLS---NPFVACALVDMYGKCVSTFSARKLFDE---IPQRNVVV------ 126
+H+ I G+ + + +A +LV MY SA+ L +E + N+++
Sbjct: 322 QLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESFDLQSCNIIINRYLKN 381
Query: 127 ---------------------WNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAG 165
W +MI Y + VS A +F +H D T+ +I+G
Sbjct: 382 GDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLH-DKDGVTWTVMISG 440
Query: 166 LAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHI-- 223
L E A+A + M LKP T LL + ++L+ K IH C I
Sbjct: 441 LVQNEL-FAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIH-CVIAKTTAC 498
Query: 224 -DPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFH 282
DP L++ LV Y +CG + +A +F M ++D V+W+S+I + HG A AL F
Sbjct: 499 YDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFK 558
Query: 283 HMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRA 342
M + P+ +TFL VL ACSH+GL L+ F M++ Y +QP DHY ++D+L RA
Sbjct: 559 EMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPGIDHYISMIDLLGRA 618
Query: 343 GRLYEAYDIIRGMPVKVTVKAWGALLGAC----RTYGEVELAEIAGRALFEIEPDNPANY 398
G+L EA + I +P +GALLG C R +AE A L E++P N +
Sbjct: 619 GKLKEAEEFISALPFTPDHTVYGALLGLCGLNWRDKDAEGIAERAAMRLLELDPVNAPGH 678
Query: 399 VLLARIYASMGRHGEAXXXXXXXXXXGVKVAPGGSWV 435
V L +YA +GRH GVK PG SWV
Sbjct: 679 VALCNVYAGLGRHDMEKEMRKEMGIKGVKKTPGCSWV 715
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 115/258 (44%), Gaps = 22/258 (8%)
Query: 71 IHRSQLGAAIHSHSI-----KMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVV 125
+ R G +H+ + + G ++ +L+ Y K AR LF+ +P+RN+V
Sbjct: 50 LRRLSEGGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIV 109
Query: 126 VWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDG-SAKAIAFYWRMR 184
NAM++ Y +++A +F M + ++ ++ L +DG S A+ + M
Sbjct: 110 TCNAMLTGYVKCRRMNEAWTLFREM--PKNVVSWTVMLTALC--DDGRSEDAVELFDEMP 165
Query: 185 ELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLI 244
E N+++ L+ +R + K++ + + G +E G +
Sbjct: 166 E----RNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIENDG----ME 217
Query: 245 NASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACS 304
A +F +M E++VV W+S++ Y +G+ R A F M + +++ A++ +
Sbjct: 218 EAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNI----VSWTAMISGFA 273
Query: 305 HAGLADDALDYFARMQQD 322
L +AL F M++D
Sbjct: 274 WNELYREALMLFLEMKKD 291
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 84/362 (23%), Positives = 146/362 (40%), Gaps = 62/362 (17%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
++SWT L + G + A+ +F+ + +S + V L+ ++ Q+ A+
Sbjct: 138 VVSWTVMLTALCDDGRSEDAVELFDEMPERNVVSWNTLVTGLI-RNGDMEKAKQVFDAMP 196
Query: 82 SHSIK------MGFLSNPFVACALV---DMYGKCVSTFS--------------ARKLFDE 118
S + G++ N + A + DM K V T++ A +LF E
Sbjct: 197 SRDVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCE 256
Query: 119 IPQRNVVVWNAMISLYTHSNCVSDALYMF-----DAMHVAPDASTFNAIIAGLAG----- 168
+P+RN+V W AMIS + + +AL +F D V+P+ T ++ G
Sbjct: 257 MPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEF 316
Query: 169 ---TEDGSAKAIAFYWRM--RELSLKPNLITLLALLRACVRMTS-LNMIKEIHGCSIRNH 222
E A+ I+ W + L +L+ + A S LN ++ C+I
Sbjct: 317 RRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESFDLQSCNI--- 373
Query: 223 IDPHPQLRSGLVEAYGRCGCLINASNVFYNMKE-RDVVAWSSLISAYALHGEARSALETF 281
++ Y + G L A +F +K D V+W+S+I Y G+ A F
Sbjct: 374 ----------IINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLF 423
Query: 282 HHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSR 341
+ D +T+ ++ L +A + M + GL+P + YS L LS
Sbjct: 424 QKLHD----KDGVTWTVMISGLVQNELFAEAASLLSDMVR-CGLKPLNSTYSVL---LSS 475
Query: 342 AG 343
AG
Sbjct: 476 AG 477
>AT1G71420.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:26917822-26920059 REVERSE
Length = 745
Score = 190 bits (483), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 124/430 (28%), Positives = 208/430 (48%), Gaps = 53/430 (12%)
Query: 18 NYLRLISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRS--- 74
+ L++W + + ++A+ VF + + + D L L CS++++S
Sbjct: 222 KFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSD-GVGFDRATL---LNICSSLYKSSDL 277
Query: 75 ------QLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFS-ARKLFDEIPQ-RNVVV 126
+ +HS ++K G ++ VA AL+ +Y + + ++ KLF E+ R++V
Sbjct: 278 VPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVA 337
Query: 127 WNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMREL 186
WN +I+ A ++D P+ +AI + ++R+
Sbjct: 338 WNGIIT----------AFAVYD-----PE-------------------RAIHLFGQLRQE 363
Query: 187 SLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINA 246
L P+ T ++L+AC + + IH I+ L + L+ AY +CG L
Sbjct: 364 KLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLC 423
Query: 247 SNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHA 306
VF +M RDVV+W+S++ AY+LHG+ S L F M++ PD TF+A+L ACSHA
Sbjct: 424 MRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKMDIN---PDSATFIALLSACSHA 480
Query: 307 GLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGA 366
G ++ L F M + P +HY+C++D+LSRA R EA ++I+ MP+ W A
Sbjct: 481 GRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIA 540
Query: 367 LLGACRTYGEVELAEIAGRALFE-IEPDNPANYVLLARIYASMGRHGEAXXXXXXXXXXG 425
LLG+CR +G L ++A L E +EP N +Y+ ++ IY + G EA
Sbjct: 541 LLGSCRKHGNTRLGKLAADKLKELVEPTNSMSYIQMSNIYNAEGSFNEANLSIKEMETWR 600
Query: 426 VKVAPGGSWV 435
V+ P SW
Sbjct: 601 VRKEPDLSWT 610
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 98/401 (24%), Positives = 187/401 (46%), Gaps = 49/401 (12%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
++SWT + +V+ G Q+ +F+ + + + + LS VL SC R + G +H
Sbjct: 127 VVSWTALITGYVQAGNEQEGFCLFSSMLSHCFP--NEFTLSSVLTSC----RYEPGKQVH 180
Query: 82 SHSIKMGFLSNPFVACALVDMYGKC---VSTFSARKLFDEIPQRNVVVWNAMISLYTHSN 138
++K+G + +VA A++ MYG+C + + A +F+ I +N+V WN+MI+ + N
Sbjct: 181 GLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCN 240
Query: 139 CVSDALYMFDAMH---VAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITL 195
A+ +F MH V D +T I + L + D L PN ++
Sbjct: 241 LGKKAIGVFMRMHSDGVGFDRATLLNICSSLYKSSD----------------LVPNEVS- 283
Query: 196 LALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGR-CGCLINASNVFYNMK 254
+ C+ ++H ++++ + ++ + L++ Y + +F M
Sbjct: 284 ----KCCL---------QLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMS 330
Query: 255 E-RDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDAL 313
RD+VAW+ +I+A+A++ R A+ F + K+ PD TF +VLKAC+ A AL
Sbjct: 331 HCRDIVAWNGIITAFAVYDPER-AIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHAL 389
Query: 314 DYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRT 373
A++ + G + + L+ ++ G L + M + V +W ++L A
Sbjct: 390 SIHAQVIKG-GFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVV-SWNSMLKAYSL 447
Query: 374 YGEVELAEIAGRALFEIEPDNPANYVLLARIYASMGRHGEA 414
+G+V+ + + +I PD+ A ++ L + GR E
Sbjct: 448 HGQVDSILPVFQKM-DINPDS-ATFIALLSACSHAGRVEEG 486
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 102/241 (42%), Gaps = 43/241 (17%)
Query: 64 VLKSCSAIHRSQLGAAIHSHSIKMGFL--SNPFVACALVDMYGKCVSTFSARKLFDEIPQ 121
+ ++C+ G +H H + + N +A L++MY KC + AR++FD +P+
Sbjct: 65 LFQACAEQRNLLDGINLHHHMLSHPYCYSQNVILANFLINMYAKCGNILYARQVFDTMPE 124
Query: 122 RNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYW 181
RNVV W A+I+ Y + + +F +M + F
Sbjct: 125 RNVVSWTALITGYVQAGNEQEGFCLFSSML----SHCF---------------------- 158
Query: 182 RMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRC- 240
PN TL ++L +C K++HG +++ + + + ++ YGRC
Sbjct: 159 --------PNEFTLSSVLTSCRYEPG----KQVHGLALKLGLHCSIYVANAVISMYGRCH 206
Query: 241 --GCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLA 298
A VF +K +++V W+S+I+A+ + A+ F M V D T L
Sbjct: 207 DGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLN 266
Query: 299 V 299
+
Sbjct: 267 I 267
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 59/116 (50%), Gaps = 13/116 (11%)
Query: 197 ALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQ-------LRSGLVEAYGRCGCLINASNV 249
AL +AC +L + G ++ +H+ HP L + L+ Y +CG ++ A V
Sbjct: 64 ALFQACAEQRNL-----LDGINLHHHMLSHPYCYSQNVILANFLINMYAKCGNILYARQV 118
Query: 250 FYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSH 305
F M ER+VV+W++LI+ Y G + F M ++ P++ T +VL +C +
Sbjct: 119 FDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSM-LSHCFPNEFTLSSVLTSCRY 173
>AT2G04860.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:1706787-1708535 REVERSE
Length = 582
Score = 189 bits (481), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 112/386 (29%), Positives = 191/386 (49%), Gaps = 33/386 (8%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
++ T ++ + ++G A+V F+ + L + +D L +L C +G ++H
Sbjct: 202 IVGLTSIVSCYAEKGDMDIAVVYFSKTR-QLCMKIDAVALVGILHGCKKSSHIDIGMSLH 260
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVS 141
++IK G + V L+ MY K FD+ V
Sbjct: 261 GYAIKSGLCTKTLVVNGLITMYSK----------FDD---------------------VE 289
Query: 142 DALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRA 201
L++F+ + P S +N++I+G + S F+ M L P+ IT+ +LL
Sbjct: 290 TVLFLFEQLQETPLIS-WNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAG 348
Query: 202 CVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAW 261
C ++ LN+ KE+HG ++RN+ + + + L++ Y +CG + A +VF ++K W
Sbjct: 349 CSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATW 408
Query: 262 SSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQ 321
+S+IS Y+L G AL + M + PD+ITFL VL AC+H G D+ F M +
Sbjct: 409 NSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIK 468
Query: 322 DYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVELAE 381
++G+ P+ HY+ +V +L RA EA +I M +K WGALL AC + E+E+ E
Sbjct: 469 EFGISPTLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALLSACIIHRELEVGE 528
Query: 382 IAGRALFEIEPDNPANYVLLARIYAS 407
R +F ++ N YVL++ +YA+
Sbjct: 529 YVARKMFMLDYKNGGLYVLMSNLYAT 554
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 90/424 (21%), Positives = 160/424 (37%), Gaps = 91/424 (21%)
Query: 12 IMSYSSNYLRLISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAI 71
I YS N +W K ++QGF A + N L P+ C
Sbjct: 13 ICGYSRNGYECDAW-KLFIVMLQQGFSPSATTLVN---------LLPF--------CGQC 54
Query: 72 HRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMI 131
G ++H + K G + V AL+ Y KC SA LF E+ ++ V WN MI
Sbjct: 55 GFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMI 114
Query: 132 SLYTHSNCVSDALYMFDAM------------------HVAPDASTFNAIIAGLAGTEDGS 173
Y+ S +A+ +F M HV+ + + G+
Sbjct: 115 GAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSAHVSHEPLHCLVVKCGMVNDISVV 174
Query: 174 AKAIAFYWRMREL--------SLKPNLITLLALLRAC---------------------VR 204
+ Y R L S K + I L + +C ++
Sbjct: 175 TSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMK 234
Query: 205 MTSLNMIKEIHGCSIRNHIDPHPQLR---------------SGLVEAYGRCGCLINASNV 249
+ ++ ++ +HGC +HID L +GL+ Y + + +
Sbjct: 235 IDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFL 294
Query: 250 FYNMKERDVVAWSSLISAYALHGEARSALETFHHMEM-AKVLPDDITFLAVLKACSHAGL 308
F ++E +++W+S+IS G A +A E FH M + +LPD IT ++L CS
Sbjct: 295 FEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCC 354
Query: 309 ADDALDYFARMQQDYGLQPS--SDHYSC--LVDVLSRAGRLYEAYDIIRGMPVKVTVKAW 364
+ + Y L+ + ++++ C L+D+ ++ G +A + + + T W
Sbjct: 355 LN-----LGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTA-TW 408
Query: 365 GALL 368
+++
Sbjct: 409 NSMI 412
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 82/184 (44%), Gaps = 33/184 (17%)
Query: 119 IPQRNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIA 178
+P+R+ VVWNA+I Y+ + DA +F M
Sbjct: 1 MPERDTVVWNALICGYSRNGYECDAWKLFIVM---------------------------- 32
Query: 179 FYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYG 238
+ P+ TL+ LL C + ++ + +HG + ++ ++ Q+++ L+ Y
Sbjct: 33 -----LQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYS 87
Query: 239 RCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLA 298
+C L +A +F MK++ V+W+++I AY+ G A+ F +M V +T +
Sbjct: 88 KCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIIN 147
Query: 299 VLKA 302
+L A
Sbjct: 148 LLSA 151
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-449838 REVERSE
Length = 500
Score = 189 bits (480), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 110/372 (29%), Positives = 190/372 (51%), Gaps = 39/372 (10%)
Query: 102 MYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMH---VAPDAST 158
MY K AR +FD + +N+V WN+++S +++ + DA + M + PDA T
Sbjct: 1 MYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAIT 60
Query: 159 FNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRACVR-------------- 204
+N++ +G A T KA+ +M+E + PN+++ A+ C +
Sbjct: 61 WNSLASGYA-TLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKM 119
Query: 205 -----------MTSLNMI----------KEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCL 243
M++L I KE+HG +R ++ + + LV+ YG+ G L
Sbjct: 120 QEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDL 179
Query: 244 INASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKAC 303
+A +F+ +K + + +W+ ++ YA+ G + F M A + PD ITF +VL C
Sbjct: 180 QSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVC 239
Query: 304 SHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKA 363
++GL + YF M+ YG+ P+ +H SC+VD+L R+G L EA+D I+ M +K
Sbjct: 240 KNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLKPDATI 299
Query: 364 WGALLGACRTYGEVELAEIAGRALFEIEPDNPANYVLLARIYASMGRHGEAXXXXXXXXX 423
WGA L +C+ + ++ELAEIA + L +EP N ANY+++ +Y+++ R +
Sbjct: 300 WGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANYMMMINLYSNLNRWEDVERIRNLMRN 359
Query: 424 XGVKVAPGGSWV 435
V+V SW+
Sbjct: 360 NRVRVQDLWSWI 371
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 69/146 (47%), Gaps = 4/146 (2%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
++SWT + K G + AL VF +Q + + +S +LK + G +H
Sbjct: 93 VVSWTAIFSGCSKNGNFRNALKVFIKMQEE-GVGPNAATMSTLLKILGCLSLLHSGKEVH 151
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVS 141
++ + + +VA ALVDMYGK SA ++F I +++ WN M+ Y
Sbjct: 152 GFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGE 211
Query: 142 DALYMFDAMHVA---PDASTFNAIIA 164
+ + F M A PDA TF ++++
Sbjct: 212 EGIAAFSVMLEAGMEPDAITFTSVLS 237
>AT5G66500.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:26548076-26549674 REVERSE
Length = 532
Score = 189 bits (479), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 117/396 (29%), Positives = 205/396 (51%), Gaps = 46/396 (11%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
L+SW L+ ++ G ++AL VF + + + + LS V+K+C+++ Q G +H
Sbjct: 150 LVSWNALLSGFLRNGKGKEALGVFAAMYRE-RVEISEFTLSSVVKTCASLKILQQGKQVH 208
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVS 141
+ + G R L VV+ AMIS Y+ ++
Sbjct: 209 AMVVVTG------------------------RDL--------VVLGTAMISFYSSVGLIN 236
Query: 142 DALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRA 201
+A+ ++++++V D N++I+G + AF R+ +PN+ L + L
Sbjct: 237 EAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKE---AFLLMSRQ---RPNVRVLSSSLAG 290
Query: 202 CVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAW 261
C + L + K+IH ++RN +L +GL++ YG+CG ++ A +F + + VV+W
Sbjct: 291 CSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSW 350
Query: 262 SSLISAYALHGEARSALETFHHM--EMAKVLPDDITFLAVLKACSHAGLADDALDYFARM 319
+S+I AYA++G+ ALE F M E + VLP+ +TFL V+ AC+HAGL + + F M
Sbjct: 351 TSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMM 410
Query: 320 QQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGM----PVKVTVKAWGALLGACRTYG 375
++ Y L P ++HY C +D+LS+AG E + ++ M + W A+L AC
Sbjct: 411 KEKYRLVPGTEHYVCFIDILSKAGETEEIWRLVERMMENDNQSIPCAIWVAVLSACSLNM 470
Query: 376 EVELAE-IAGRALFEIEPDNPANYVLLARIYASMGR 410
++ E +A R + E P+N + YVL++ YA+MG+
Sbjct: 471 DLTRGEYVARRLMEETGPENASIYVLVSNFYAAMGK 506
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 91/194 (46%), Gaps = 35/194 (18%)
Query: 112 ARKLFDEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMHVA-PDASTFNAIIAGLAGTE 170
A LFDE+PQR++ N+ +S + S +D L +F +H A PD S+
Sbjct: 37 ADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPDLSSH----------- 85
Query: 171 DGSAKAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLR 230
T +L AC ++ +++H I+ + +
Sbjct: 86 -----------------------TFTPVLGACSLLSYPETGRQVHALMIKQGAETGTISK 122
Query: 231 SGLVEAYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVL 290
+ L++ Y + G L+++ VF +++E+D+V+W++L+S + +G+ + AL F M +V
Sbjct: 123 TALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVE 182
Query: 291 PDDITFLAVLKACS 304
+ T +V+K C+
Sbjct: 183 ISEFTLSSVVKTCA 196
>AT2G46050.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:18939262-18941034 FORWARD
Length = 590
Score = 188 bits (478), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 106/322 (32%), Positives = 175/322 (54%), Gaps = 4/322 (1%)
Query: 115 LFDEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSA 174
LF Q ++ V A++++Y SN +SDA F++M V + ++NA+I G A +G
Sbjct: 267 LFKVSYQFDIPVATALLNMYAKSNHLSDARECFESM-VVRNVVSWNAMIVGFAQNGEGR- 324
Query: 175 KAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLV 234
+A+ + +M +L+P+ +T ++L +C + +++ IK++ + + + L+
Sbjct: 325 EAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLI 384
Query: 235 EAYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDI 294
+Y R G L A F++++E D+V+W+S+I A A HG A +L+ F M + K+ PD I
Sbjct: 385 SSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFAEESLQMFESM-LQKLQPDKI 443
Query: 295 TFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRG 354
TFL VL ACSH GL + L F RM + Y ++ +HY+CL+D+L RAG + EA D++
Sbjct: 444 TFLEVLSACSHGGLVQEGLRCFKRMTEFYKIEAEDEHYTCLIDLLGRAGFIDEASDVLNS 503
Query: 355 MPVKVTVKAWGALLGACRTYGEVELAEIAGRALFEIEPDNPANYVLLARIYASMGRHGEA 414
MP + + A A G C + + E + + L EIEP P NY +L+ Y S G +A
Sbjct: 504 MPTEPSTHALAAFTGGCNIHEKRESMKWGAKKLLEIEPTKPVNYSILSNAYVSEGHWNQA 563
Query: 415 XXXXXXXXXXGVK-VAPGGSWV 435
PG SW+
Sbjct: 564 ALLRKRERRNCYNPKTPGCSWL 585
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/347 (24%), Positives = 158/347 (45%), Gaps = 50/347 (14%)
Query: 54 LSLDPYVLSLVLKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSAR 113
+SLD +++ C+ + G +H +K G S+ F + +LV YGKC AR
Sbjct: 138 VSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEAR 197
Query: 114 KLFDEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGS 173
++F+ + R++V+WNA++S Y + + +A + M D + F
Sbjct: 198 RVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLM--GSDKNRF-------------- 241
Query: 174 AKAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGL 233
+ + T +LL AC + K+IH + + + L
Sbjct: 242 ---------------RGDYFTFSSLLSAC----RIEQGKQIHAILFKVSYQFDIPVATAL 282
Query: 234 VEAYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDD 293
+ Y + L +A F +M R+VV+W+++I +A +GE R A+ F M + + PD+
Sbjct: 283 LNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDE 342
Query: 294 ITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSC---LVDVLSRAGRLYEA-- 348
+TF +VL +C+ A+ ++Q + S+D S L+ SR G L EA
Sbjct: 343 LTFASVLSSCAKFS----AIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALL 398
Query: 349 -YDIIRGMPVKVTVKAWGALLGACRTYGEVELA-EIAGRALFEIEPD 393
+ IR + + +W +++GA ++G E + ++ L +++PD
Sbjct: 399 CFHSIR----EPDLVSWTSVIGALASHGFAEESLQMFESMLQKLQPD 441
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 137/318 (43%), Gaps = 40/318 (12%)
Query: 81 HSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCV 140
H +K G ++ F+ L+ Y K A KLFDE+P RN+V WN +I
Sbjct: 59 HGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILI--------- 109
Query: 141 SDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLR 200
+ +I T + + R+ + + ++ + L+R
Sbjct: 110 -------------------HGVIQRDGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIR 150
Query: 201 ACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVA 260
C T++ ++H ++ ++ + LV YG+CG ++ A VF + +RD+V
Sbjct: 151 LCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVL 210
Query: 261 WSSLISAYALHGEARSALETFHHM--EMAKVLPDDITFLAVLKACS-HAGLADDALDYFA 317
W++L+S+Y L+G A M + + D TF ++L AC G A+ +
Sbjct: 211 WNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSACRIEQGKQIHAILFKV 270
Query: 318 RMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGE- 376
Q D + + L+++ +++ L +A + M V+ V +W A++ GE
Sbjct: 271 SYQFDIPVA------TALLNMYAKSNHLSDARECFESMVVR-NVVSWNAMIVGFAQNGEG 323
Query: 377 VELAEIAGRALFE-IEPD 393
E + G+ L E ++PD
Sbjct: 324 REAMRLFGQMLLENLQPD 341
>AT2G44880.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:18505239-18506906 FORWARD
Length = 555
Score = 188 bits (478), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 109/327 (33%), Positives = 177/327 (54%), Gaps = 7/327 (2%)
Query: 86 KMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSDALY 145
+M + + + A++D + K SAR+LFDE+ + V+ W MI Y + + A
Sbjct: 169 QMPHVKDVVIYNAMMDGFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARK 228
Query: 146 MFDAMHVAPDAS--TFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRACV 203
+FDAM P+ + ++N +I G + F SL P+ +T+L++L A
Sbjct: 229 LFDAM---PERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAIS 285
Query: 204 RMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWSS 263
+L++ + H R +D ++ + +++ Y +CG + A +F M E+ V +W++
Sbjct: 286 DTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNA 345
Query: 264 LISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQDY 323
+I YAL+G AR+AL+ F M M + PD+IT LAV+ AC+H GL ++ +F M++
Sbjct: 346 MIHGYALNGNARAALDLFVTM-MIEEKPDEITMLAVITACNHGGLVEEGRKWFHVMRE-M 403
Query: 324 GLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVELAEIA 383
GL +HY C+VD+L RAG L EA D+I MP + + L AC Y ++E AE
Sbjct: 404 GLNAKIEHYGCMVDLLGRAGSLKEAEDLITNMPFEPNGIILSSFLSACGQYKDIERAERI 463
Query: 384 GRALFEIEPDNPANYVLLARIYASMGR 410
+ E+EP N NYVLL +YA+ R
Sbjct: 464 LKKAVELEPQNDGNYVLLRNLYAADKR 490
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/371 (24%), Positives = 162/371 (43%), Gaps = 52/371 (14%)
Query: 29 LNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIHSHSIKMG 88
+ ++++ + + ++ ++ + D + + + KSCS G +HS + G
Sbjct: 49 IKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFG 108
Query: 89 FLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSDALYMFD 148
F ++ +V+ +VDMY K AR FDE+P R+ V W A+IS Y + A +FD
Sbjct: 109 FCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFD 168
Query: 149 AMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRACVRMTSL 208
M D +NA++ G + D ++ F E++ K T +
Sbjct: 169 QMPHVKDVVIYNAMMDGFVKSGDMTSARRLF----DEMTHK----------------TVI 208
Query: 209 NMIKEIHG-CSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWSSLISA 267
IHG C+I++ ID A +F M ER++V+W+++I
Sbjct: 209 TWTTMIHGYCNIKD-IDA--------------------ARKLFDAMPERNLVSWNTMIGG 247
Query: 268 YALHGEARSALETFHHMEMAKVL-PDDITFLAVLKACSHAG---LADDALDYFARMQQDY 323
Y + + + + F M+ L PDD+T L+VL A S G L + + R + D
Sbjct: 248 YCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDK 307
Query: 324 GLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVELA-EI 382
++ + ++D+ S+ G + +A I MP K V +W A++ G A ++
Sbjct: 308 KVKVC----TAILDMYSKCGEIEKAKRIFDEMPEK-QVASWNAMIHGYALNGNARAALDL 362
Query: 383 AGRALFEIEPD 393
+ E +PD
Sbjct: 363 FVTMMIEEKPD 373
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 104/272 (38%), Gaps = 65/272 (23%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
L+SW + + + Q+ + +F +Q + +L D + VL + S LG H
Sbjct: 238 LVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCH 297
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVS 141
+ V A++DMY KC A+++FDE+P++ V WNAMI Y +
Sbjct: 298 CFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNAR 357
Query: 142 DALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRA 201
AL +F M + KP+ IT+LA++ A
Sbjct: 358 AALDLFVTMMIEE----------------------------------KPDEITMLAVITA 383
Query: 202 C---------------VRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINA 246
C +R LN E +GC +V+ GR G L A
Sbjct: 384 CNHGGLVEEGRKWFHVMREMGLNAKIEHYGC---------------MVDLLGRAGSLKEA 428
Query: 247 SNVFYNMK-ERDVVAWSSLISAYALHGEARSA 277
++ NM E + + SS +SA + + A
Sbjct: 429 EDLITNMPFEPNGIILSSFLSACGQYKDIERA 460
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 101/261 (38%), Gaps = 44/261 (16%)
Query: 112 ARKLFDEIPQRN-VVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTE 170
ARKLFD+ PQR+ + N+MI Y + D+ ++ +
Sbjct: 29 ARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALYRDLR------------------- 69
Query: 171 DGSAKAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLR 230
+E P+ T L ++C + ++H R +
Sbjct: 70 -------------KETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVS 116
Query: 231 SGLVEAYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVL 290
+G+V+ Y + G + A N F M R V+W++LIS Y GE A + F M K
Sbjct: 117 TGVVDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVK-- 174
Query: 291 PDDITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSS-DHYSCLVDVLSRAGRLYEAY 349
D + + A++ +G A F M + ++ H C + + A +L++A
Sbjct: 175 -DVVIYNAMMDGFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDA- 232
Query: 350 DIIRGMPVKVTVKAWGALLGA 370
MP + V +W ++G
Sbjct: 233 -----MPERNLV-SWNTMIGG 247
>AT1G69350.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:26069882-26072245 FORWARD
Length = 787
Score = 188 bits (478), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 125/423 (29%), Positives = 206/423 (48%), Gaps = 55/423 (13%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
+++W ++ + +G QAL +F + T + D + L+ + +C LG IH
Sbjct: 370 IVAWNSLISLYAHRGMVIQALGLFRQMVTQ-RIKPDAFTLASSISACENAGLVPLGKQIH 428
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVS 141
H I+ +S+ FV +L+DMY K S SA +F++I R+VV WN+M+ ++ +
Sbjct: 429 GHVIRTD-VSDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNG--- 484
Query: 142 DALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRA 201
S +AI+ + M L+ N +T LA+++A
Sbjct: 485 ------------------------------NSVEAISLFDYMYHSYLEMNEVTFLAVIQA 514
Query: 202 CVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGL---------VEAYGRCGCLINASNVFYN 252
C + SL K +H H + SGL ++ Y +CG L A VF
Sbjct: 515 CSSIGSLEKGKWVH----------HKLIISGLKDLFTDTALIDMYAKCGDLNAAETVFRA 564
Query: 253 MKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDA 312
M R +V+WSS+I+AY +HG SA+ TF+ M + P+++ F+ VL AC H+G ++
Sbjct: 565 MSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEG 624
Query: 313 LDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACR 372
YF M+ +G+ P+S+H++C +D+LSR+G L EAY I+ MP WG+L+ CR
Sbjct: 625 KYYFNLMKS-FGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCR 683
Query: 373 TYGEVELAEIAGRALFEIEPDNPANYVLLARIYASMGRHGEAXXXXXXXXXXGVKVAPGG 432
+ ++++ + L +I D+ Y LL+ IYA G E +K PG
Sbjct: 684 IHQKMDIIKAIKNDLSDIVTDDTGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNLKKVPGY 743
Query: 433 SWV 435
S +
Sbjct: 744 SAI 746
Score = 121 bits (303), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 164/351 (46%), Gaps = 44/351 (12%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
L++W+ ++S ++ G +AL +F + + D + V++ C+ + ++ ++H
Sbjct: 167 LVAWSTLVSSCLENGEVVKALRMFKCMVDD-GVEPDAVTMISVVEGCAELGCLRIARSVH 225
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVS 141
+ F + + +L+ MY KC S+ ++F++I ++N V W AMIS Y
Sbjct: 226 GQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRG---- 281
Query: 142 DALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRA 201
+ S KA+ + M + ++PNL+TL ++L +
Sbjct: 282 -----------------------------EFSEKALRSFSEMIKSGIEPNLVTLYSVLSS 312
Query: 202 CVRMTSLNMIKEIHGCSIRNHIDP-HPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVA 260
C + + K +HG ++R +DP + L LVE Y CG L + V + +R++VA
Sbjct: 313 CGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVA 372
Query: 261 WSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQ 320
W+SLIS YA G AL F M ++ PD T + + AC +AGL +
Sbjct: 373 WNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVP-----LGKQI 427
Query: 321 QDYGLQPS-SDHY--SCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALL 368
+ ++ SD + + L+D+ S++G + A + + + +V W ++L
Sbjct: 428 HGHVIRTDVSDEFVQNSLIDMYSKSGSVDSASTVFNQIKHR-SVVTWNSML 477
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/326 (23%), Positives = 154/326 (47%), Gaps = 41/326 (12%)
Query: 47 HIQTSLALSLDPYVLSLVLKSCSAIHRS-QLGAAIHSHSIKMGFLSNPFVACALVDMYGK 105
H S + +V VL++C+ +G +H IK G + + +L+ MYG+
Sbjct: 89 HRLVSETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQ 148
Query: 106 CVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAG 165
+ A K+FD +P R++V W+ ++S + V AL MF M
Sbjct: 149 TGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCM--------------- 193
Query: 166 LAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDP 225
+DG ++P+ +T+++++ C + L + + +HG R D
Sbjct: 194 ---VDDG---------------VEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDL 235
Query: 226 HPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHME 285
L + L+ Y +CG L+++ +F + +++ V+W+++IS+Y + AL +F M
Sbjct: 236 DETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMI 295
Query: 286 MAKVLPDDITFLAVLKACSHAGLADD--ALDYFARMQQDYGLQPSSDHYS-CLVDVLSRA 342
+ + P+ +T +VL +C GL + ++ FA ++ L P+ + S LV++ +
Sbjct: 296 KSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRE---LDPNYESLSLALVELYAEC 352
Query: 343 GRLYEAYDIIRGMPVKVTVKAWGALL 368
G+L + ++R + + + AW +L+
Sbjct: 353 GKLSDCETVLRVVSDR-NIVAWNSLI 377
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 92/363 (25%), Positives = 157/363 (43%), Gaps = 66/363 (18%)
Query: 64 VLKSCSAIHRSQLGAAIHSHSIKMGFLS-NPFVACALVDMYGKCVSTFSARKLFDEIPQR 122
+ +SCS++ +L + +H+H + G L +P L++ Y S S+R +F+ P
Sbjct: 7 LFRSCSSL---RLVSQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYP 63
Query: 123 NVVVWNAMI--SLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFY 180
+ ++ +I +++ H + DA AI Y
Sbjct: 64 DSFMYGVLIKCNVWCH---------LLDA--------------------------AIDLY 88
Query: 181 WRMRELSLKPNLITLLALLRACV-RMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGR 239
R+ + + + ++LRAC L++ ++HG I+ +D + + L+ YG+
Sbjct: 89 HRLVSETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQ 148
Query: 240 CGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAV 299
G L +A VF M RD+VAWS+L+S+ +GE AL F M V PD +T ++V
Sbjct: 149 TGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISV 208
Query: 300 LKACSHAG---LADDALDYFARMQQDYGLQPSSDHYSC--LVDVLSRAGRLYEAYDIIRG 354
++ C+ G +A R D D C L+ + S+ G L + I
Sbjct: 209 VEGCAELGCLRIARSVHGQITRKMFDL------DETLCNSLLTMYSKCGDLLSSERIFEK 262
Query: 355 MPVKVTVKAWGALLGACRTYGEVELAEIAGRALFE-----IEPDNPANYVLLARIYASMG 409
+ K V +W A++ +Y E +E A R+ E IEP N V L + +S G
Sbjct: 263 IAKKNAV-SWTAMIS---SYNRGEFSEKALRSFSEMIKSGIEP----NLVTLYSVLSSCG 314
Query: 410 RHG 412
G
Sbjct: 315 LIG 317
>AT2G36980.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15531161-15533038 FORWARD
Length = 625
Score = 188 bits (477), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 120/420 (28%), Positives = 200/420 (47%), Gaps = 12/420 (2%)
Query: 23 ISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQL-GAAIH 81
+W ++ H G + L +F + S D Y S ++ +CSA + + G +H
Sbjct: 170 FAWNIMISGHAHCGKLESCLSLFKEMLES-EFKPDCYTFSSLMNACSADSSNVVYGRMVH 228
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVS 141
+ +K G+ S +++ Y K S A + + I V WN++I
Sbjct: 229 AVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETE 288
Query: 142 DALYMFDAMHVAPDAS--TFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALL 199
AL +F H+AP+ + T+ +I G DG +A+ F+ M + + + A+L
Sbjct: 289 KALEVF---HLAPEKNIVTWTTMITGYGRNGDGE-QALRFFVEMMKSGVDSDHFAYGAVL 344
Query: 200 RACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVV 259
AC + L K IHGC I + + + LV Y +CG + A F ++ +D+V
Sbjct: 345 HACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLV 404
Query: 260 AWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARM 319
+W++++ A+ +HG A AL+ + +M + + PD++TF+ +L CSH+GL ++ F M
Sbjct: 405 SWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESM 464
Query: 320 QQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVT----VKAWGALLGACRTYG 375
+DY + DH +C++D+ R G L EA D+ VT +W LLGAC T+
Sbjct: 465 VKDYRIPLEVDHVTCMIDMFGRGGHLAEAKDLATTYSSLVTDSSNNSSWETLLGACSTHW 524
Query: 376 EVELAEIAGRALFEIEPDNPANYVLLARIYASMGRHGEAXXXXXXXXXXGVKVAPGGSWV 435
EL + L EP ++VLL+ +Y S GR E G+K PG SW+
Sbjct: 525 HTELGREVSKVLKIAEPSEEMSFVLLSNLYCSTGRWKEGEDVRREMVERGMKKTPGCSWI 584
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 154/320 (48%), Gaps = 19/320 (5%)
Query: 20 LRLISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAA 79
L ++W L S+ + G HQ+A+ +F ++ S A D Y + +L +C+++ + G
Sbjct: 33 LDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDA-KPDDYSFTAILSTCASLGNVKFGRK 91
Query: 80 IHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEI--PQRNVVVWNAMISLYTHS 137
I S I+ GF ++ V +L+DMYGKC T SA K+F ++ RN V W +++ Y ++
Sbjct: 92 IQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCDSRNEVTWCSLLFAYMNA 151
Query: 138 NCVSDALYMFDAMHVAPDASTF--NAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITL 195
AL +F M P F N +I+G A + ++ + M E KP+ T
Sbjct: 152 EQFEAALDVFVEM---PKRVAFAWNIMISGHAHCGKLES-CLSLFKEMLESEFKPDCYTF 207
Query: 196 LALLRACVRMTSLNMI--KEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNM 253
+L+ AC +S N++ + +H ++N + ++ ++ Y + G +A ++
Sbjct: 208 SSLMNACSADSS-NVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESI 266
Query: 254 KERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDAL 313
+ V+W+S+I A GE ALE FH + +T+ ++ G + AL
Sbjct: 267 EVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNI----VTWTTMITGYGRNGDGEQAL 322
Query: 314 DYFARMQQDYGLQPSSDHYS 333
+F M + SDH++
Sbjct: 323 RFFVEMMKS---GVDSDHFA 339
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 139/318 (43%), Gaps = 35/318 (11%)
Query: 111 SARKLFDEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMHVA---PDASTFNAIIAGLA 167
SAR++FD +P+ + V WN M++ Y+ +A+ +F + + PD +F AI++ A
Sbjct: 22 SARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSFTAILSTCA 81
Query: 168 GTEDGSAKAIAFYWRMRELSLKPNLI-------TLLALLRACVRMTSLNMIKEIHGCSIR 220
S + F +++ L ++ +L+ + C S N + C R
Sbjct: 82 -----SLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCDSR 136
Query: 221 NHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALET 280
N + L+ AY A +VF M +R AW+ +IS +A G+ S L
Sbjct: 137 NEV-----TWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSL 191
Query: 281 FHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQ----DYGLQPSSDHYSCLV 336
F M ++ PD TF +++ ACS AD + + RM G + + + ++
Sbjct: 192 FKEMLESEFKPDCYTFSSLMNACS----ADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVL 247
Query: 337 DVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVELAEIAGRALFEIEPDNPA 396
++ G +A + + V +T +W +++ AC GE E A +F + P+
Sbjct: 248 SFYTKLGSRDDAMRELESIEV-LTQVSWNSIIDACMKIGETEKA----LEVFHLAPEK-- 300
Query: 397 NYVLLARIYASMGRHGEA 414
N V + GR+G+
Sbjct: 301 NIVTWTTMITGYGRNGDG 318
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 41/74 (55%)
Query: 234 VEAYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDD 293
+ + + G + +A VF M E D VAW++++++Y+ G + A+ F + + PDD
Sbjct: 11 IASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDD 70
Query: 294 ITFLAVLKACSHAG 307
+F A+L C+ G
Sbjct: 71 YSFTAILSTCASLG 84
>AT4G08210.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:5183813-5185873 REVERSE
Length = 686
Score = 188 bits (477), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 117/411 (28%), Positives = 190/411 (46%), Gaps = 35/411 (8%)
Query: 25 WTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIHSHS 84
W L+ + ++ AL + I S L D Y LS LK C +LG +HS
Sbjct: 310 WNSMLSGFLINEENEAALWLLLQIYQS-DLCFDSYTLSGALKICINYVNLRLGLQVHSLV 368
Query: 85 IKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSDAL 144
+ G+ + V LVD++ + A KLF +P ++++ ++ +I CV
Sbjct: 369 VVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIR-----GCVK--- 420
Query: 145 YMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRACVR 204
S FN++ A + + +L L + + +L+ C
Sbjct: 421 ------------SGFNSL-------------AFYLFRELIKLGLDADQFIVSNILKVCSS 455
Query: 205 MTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWSSL 264
+ SL K+IHG I+ + P + LV+ Y +CG + N +F M ERDVV+W+ +
Sbjct: 456 LASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGI 515
Query: 265 ISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQDYG 324
I + +G A FH M + P+ +TFL +L AC H+GL ++A M+ +YG
Sbjct: 516 IVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYG 575
Query: 325 LQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVELAEIAG 384
L+P +HY C+VD+L +AG EA ++I MP++ W +LL AC T+ L +
Sbjct: 576 LEPYLEHYYCVVDLLGQAGLFQEANELINKMPLEPDKTIWTSLLTACGTHKNAGLVTVIA 635
Query: 385 RALFEIEPDNPANYVLLARIYASMGRHGEAXXXXXXXXXXGVKVAPGGSWV 435
L + PD+P+ Y L+ YA++G + G K G SW+
Sbjct: 636 EKLLKGFPDDPSVYTSLSNAYATLGMWDQLSKVREAAKKLGAK-ESGMSWI 685
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 97/380 (25%), Positives = 178/380 (46%), Gaps = 18/380 (4%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
+++WT ++ + G +A+ ++ + S + + ++ S VLK+C + QLG ++
Sbjct: 71 IVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVY 130
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVS 141
K + + ++VDMY K A F EI + + WN +IS Y + +
Sbjct: 131 ERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMD 190
Query: 142 DALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRA 201
+A+ +F M P+ ++N +I+G + GS +A+ F RM+ L + L L+A
Sbjct: 191 EAVTLFHRMP-QPNVVSWNCLISGF--VDKGSPRALEFLVRMQREGLVLDGFALPCGLKA 247
Query: 202 CVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMK---ERDV 258
C L M K++H C +++ ++ P S L++ Y CG LI A++VF+ K V
Sbjct: 248 CSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSV 307
Query: 259 VAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSH-----AGLADDAL 313
W+S++S + ++ E +AL + + + D T LK C + GL +L
Sbjct: 308 AVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSL 367
Query: 314 DYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRT 373
+ + DY + S LVD+ + G + +A+ + +P K + A+ L+ C
Sbjct: 368 VVVSGYELDYIVG------SILVDLHANVGNIQDAHKLFHRLPNK-DIIAFSGLIRGCVK 420
Query: 374 YGEVELAEIAGRALFEIEPD 393
G LA R L ++ D
Sbjct: 421 SGFNSLAFYLFRELIKLGLD 440
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 95/360 (26%), Positives = 157/360 (43%), Gaps = 34/360 (9%)
Query: 56 LDPYVLSLVLKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKL 115
+D +++ L+ C + + G +I +H IK G N F+A ++ MY A K+
Sbjct: 3 MDLKLIAAGLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKV 62
Query: 116 FDEIPQRNVVVWNAMISLYTHSNCVSDAL----YMFDAMHVAPDASTFNAIIA--GLAGT 169
FDE+ +RN+V W M+S YT + A+ M D+ A + ++A++ GL G
Sbjct: 63 FDEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGD 122
Query: 170 EDGSAKAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQL 229
I Y R+ + +L+ +++ L+ + V M N S + + P
Sbjct: 123 ---IQLGILVYERIGKENLRGDVV----LMNSVVDMYVKNGRLIEANSSFKEILRPSSTS 175
Query: 230 RSGLVEAYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKV 289
+ L+ Y + G + A +F+ M + +VV+W+ LIS + G R ALE M+ +
Sbjct: 176 WNTLISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGSPR-ALEFLVRMQREGL 234
Query: 290 LPDDITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAY 349
+ D LKACS GL + + GL+ S S L+D+ S G L A
Sbjct: 235 VLDGFALPCGLKACSFGGLLTMGKQLHCCVVKS-GLESSPFAISALIDMYSNCGSLIYAA 293
Query: 350 DII--RGMPVKVTVKAWGALLGACRTYGEVELAEIAGRALFEIEPDNPANYVLLARIYAS 407
D+ + V +V W ++L F I +N A LL +IY S
Sbjct: 294 DVFHQEKLAVNSSVAVWNSMLSG-----------------FLINEENEAALWLLLQIYQS 336
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 121/280 (43%), Gaps = 50/280 (17%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
+I+++ + VK GF+ A +F + L L D +++S +LK CS++ G IH
Sbjct: 408 IIAFSGLIRGCVKSGFNSLAFYLFREL-IKLGLDADQFIVSNILKVCSSLASLGWGKQIH 466
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVS 141
IK G+ S P A ALVDMY KC + LFD + +R+VV W +I + + V
Sbjct: 467 GLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVE 526
Query: 142 DALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRA 201
+A F +M + ++PN +T L LL A
Sbjct: 527 EAFRYFH---------------------------------KMINIGIEPNKVTFLGLLSA 553
Query: 202 CVR-------MTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMK 254
C ++L +K +G ++P+ + +V+ G+ G A+ + M
Sbjct: 554 CRHSGLLEEARSTLETMKSEYG------LEPYLEHYYCVVDLLGQAGLFQEANELINKMP 607
Query: 255 -ERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDD 293
E D W+SL++A H A L T ++ K PDD
Sbjct: 608 LEPDKTIWTSLLTACGTHKNA--GLVTVIAEKLLKGFPDD 645
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/360 (21%), Positives = 149/360 (41%), Gaps = 36/360 (10%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
++SW ++ V +G +AL +Q L LD + L LK+CS +G +H
Sbjct: 204 VVSWNCLISGFVDKG-SPRALEFLVRMQRE-GLVLDGFALPCGLKACSFGGLLTMGKQLH 261
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVS 141
+K G S+PF AL+DMY C S A +F +
Sbjct: 262 CCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQ----------------------- 298
Query: 142 DALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRA 201
+ + V + +N++++G E+ A A+ ++ + L + TL L+
Sbjct: 299 ------EKLAVNSSVAVWNSMLSGFLINEENEA-ALWLLLQIYQSDLCFDSYTLSGALKI 351
Query: 202 CVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAW 261
C+ +L + ++H + + + + S LV+ + G + +A +F+ + +D++A+
Sbjct: 352 CINYVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAF 411
Query: 262 SSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSH-AGLADDALDYFARMQ 320
S LI G A F + + D +LK CS A L + ++
Sbjct: 412 SGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIK 471
Query: 321 QDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVELA 380
+ Y +P + + LVD+ + G + + GM ++ V +W ++ G VE A
Sbjct: 472 KGYESEPVTA--TALVDMYVKCGEIDNGVVLFDGM-LERDVVSWTGIIVGFGQNGRVEEA 528
>AT3G08820.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:2677122-2679179 REVERSE
Length = 685
Score = 188 bits (477), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 122/419 (29%), Positives = 196/419 (46%), Gaps = 44/419 (10%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
+++WT + + G H++A+ +F + + + D Y + VL +C + G I
Sbjct: 177 VVTWTALFSGYTTSGRHREAIDLFKKM-VEMGVKPDSYFIVQVLSACVHVGDLDSGEWIV 235
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVS 141
+ +M N FV LV+ LY +
Sbjct: 236 KYMEEMEMQKNSFVRTTLVN-------------------------------LYAKCGKME 264
Query: 142 DALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRA 201
A +FD+M V D T++ +I G A + + I + +M + +LKP+ +++ L +
Sbjct: 265 KARSVFDSM-VEKDIVTWSTMIQGYA-SNSFPKEGIELFLQMLQENLKPDQFSIVGFLSS 322
Query: 202 CVRMTSLNMIKEIHGCSIRNHIDPHPQLRS-----GLVEAYGRCGCLINASNVFYNMKER 256
C + +L++ + G S+ ID H L + L++ Y +CG + VF MKE+
Sbjct: 323 CASLGALDLGE--WGISL---IDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEK 377
Query: 257 DVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYF 316
D+V ++ IS A +G + + F E + PD TFL +L C HAGL D L +F
Sbjct: 378 DIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFF 437
Query: 317 ARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGE 376
+ Y L+ + +HY C+VD+ RAG L +AY +I MP++ WGALL CR +
Sbjct: 438 NAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKD 497
Query: 377 VELAEIAGRALFEIEPDNPANYVLLARIYASMGRHGEAXXXXXXXXXXGVKVAPGGSWV 435
+LAE + L +EP N NYV L+ IY+ GR EA G+K PG SW+
Sbjct: 498 TQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWI 556
Score = 118 bits (296), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 89/364 (24%), Positives = 160/364 (43%), Gaps = 36/364 (9%)
Query: 17 SNYLRLISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQL 76
+ + + + +N V + L +F I+ L L + LVLK+C+ +L
Sbjct: 71 TQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKH-GLYLHGFTFPLVLKACTRASSRKL 129
Query: 77 GAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTH 136
G +HS +K GF + +L+ +Y A KLFDEIP R+VV W A+ S YT
Sbjct: 130 GIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYT- 188
Query: 137 SNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLL 196
T +AI + +M E+ +KP+ ++
Sbjct: 189 --------------------------------TSGRHREAIDLFKKMVEMGVKPDSYFIV 216
Query: 197 ALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKER 256
+L ACV + L+ + I + + +R+ LV Y +CG + A +VF +M E+
Sbjct: 217 QVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEK 276
Query: 257 DVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYF 316
D+V WS++I YA + + +E F M + PD + + L +C+ G A D ++
Sbjct: 277 DIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLG-ALDLGEWG 335
Query: 317 ARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGE 376
+ + + + L+D+ ++ G + +++ + M K V A+ G + G
Sbjct: 336 ISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKN-GH 394
Query: 377 VELA 380
V+L+
Sbjct: 395 VKLS 398
>AT3G25970.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:9500116-9502056 REVERSE
Length = 646
Score = 186 bits (472), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 118/417 (28%), Positives = 195/417 (46%), Gaps = 37/417 (8%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
LISW + K + A +F +Q + D Y + +L +CS G ++H
Sbjct: 215 LISWNSMIAGFSKHELKESAFELFIQMQRHW-VETDIYTYTGLLSACSGEEHQIFGKSLH 273
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTH--SNC 139
IK G ++ NA+IS+Y +
Sbjct: 274 GMVIKKGL-------------------------------EQVTSATNALISMYIQFPTGT 302
Query: 140 VSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALL 199
+ DAL +F+++ + D ++N+II G A + S A+ F+ +R +K + ALL
Sbjct: 303 MEDALSLFESLK-SKDLISWNSIITGFA-QKGLSEDAVKFFSYLRSSEIKVDDYAFSALL 360
Query: 200 RACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKER-DV 258
R+C + +L + ++IH + ++ + + S L+ Y +CG + +A F + +
Sbjct: 361 RSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHST 420
Query: 259 VAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFAR 318
VAW+++I YA HG + +L+ F M V D +TF A+L ACSH GL + L+
Sbjct: 421 VAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNL 480
Query: 319 MQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVE 378
M+ Y +QP +HY+ VD+L RAG + +A ++I MP+ LG CR GE+E
Sbjct: 481 MEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLNPDPMVLKTFLGVCRACGEIE 540
Query: 379 LAEIAGRALFEIEPDNPANYVLLARIYASMGRHGEAXXXXXXXXXXGVKVAPGGSWV 435
+A L EIEP++ YV L+ +Y+ + + E GVK PG SW+
Sbjct: 541 MATQVANHLLEIEPEDHFTYVSLSHMYSDLKKWEEKASVKKMMKERGVKKVPGWSWI 597
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/424 (23%), Positives = 178/424 (41%), Gaps = 86/424 (20%)
Query: 23 ISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIHS 82
+SW ++ + G + A +F ++ S +D Y S +LK +++ R LG +H
Sbjct: 12 VSWNTMISGYTSCGKLEDAWCLFTCMKRS-GSDVDGYSFSRLLKGIASVKRFDLGEQVHG 70
Query: 83 HSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSD 142
IK G+ N +V +LVDMY KC A + F EI + N V WNA+I+ + +
Sbjct: 71 LVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKT 130
Query: 143 ALYMFDAMH----VAPDASTF-----------------------------------NAII 163
A ++ M V DA TF NA+I
Sbjct: 131 AFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMI 190
Query: 164 A----------------GLAGTED---------GSAK------AIAFYWRMRELSLKPNL 192
+ GL G++D G +K A + +M+ ++ ++
Sbjct: 191 SSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDI 250
Query: 193 ITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGR--CGCLINASNVF 250
T LL AC K +HG I+ ++ + L+ Y + G + +A ++F
Sbjct: 251 YTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLF 310
Query: 251 YNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLAD 310
++K +D+++W+S+I+ +A G + A++ F ++ +++ DD F A+L++CS
Sbjct: 311 ESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSD----- 365
Query: 311 DALDYFARMQQDYGLQPSSDHY------SCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAW 364
L QQ + L S S L+ + S+ G + A + + K + AW
Sbjct: 366 --LATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAW 423
Query: 365 GALL 368
A++
Sbjct: 424 NAMI 427
>AT3G47840.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:17651912-17654032 FORWARD
Length = 706
Score = 185 bits (469), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 111/412 (26%), Positives = 196/412 (47%), Gaps = 34/412 (8%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
++SWT + ++ + G +A+ F ++ S + + + + +C+++ R G +H
Sbjct: 275 VVSWTSLIVAYKRIGQEVKAVETFIKMRNS-QVPPNEQTFASMFSACASLSRLVWGEQLH 333
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVS 141
+ + +G + V+ +++ MY C + SA LF + R+++ W+ +I Y
Sbjct: 334 CNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQ----- 388
Query: 142 DALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRA 201
AG E+G ++ MR+ KP L +LL
Sbjct: 389 ----------------------AGFG--EEG----FKYFSWMRQSGTKPTDFALASLLSV 420
Query: 202 CVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAW 261
M + +++H ++ ++ + +RS L+ Y +CG + AS +F D+V+
Sbjct: 421 SGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSL 480
Query: 262 SSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQ 321
+++I+ YA HG+++ A++ F PD +TF++VL AC+H+G D YF MQ+
Sbjct: 481 TAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQE 540
Query: 322 DYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVELAE 381
Y ++P+ +HY C+VD+L RAGRL +A +I M K W LL AC+ G++E
Sbjct: 541 TYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACKAKGDIERGR 600
Query: 382 IAGRALFEIEPDNPANYVLLARIYASMGRHGEAXXXXXXXXXXGVKVAPGGS 433
A + E++P V LA IY+S G EA GV PG S
Sbjct: 601 RAAERILELDPTCATALVTLANIYSSTGNLEEAANVRKNMKAKGVIKEPGWS 652
Score = 125 bits (313), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 98/364 (26%), Positives = 165/364 (45%), Gaps = 50/364 (13%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQT-SLALSLDPYVLSLVLKSCSAIHRSQLGAAI 80
++SWT + +V +AL++F+ ++ A+S D VLS+VLK+C G ++
Sbjct: 71 IVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKACGQSSNIAYGESL 130
Query: 81 HSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCV 140
H++++K LS+ +V +L+DMY + + ++F E+P RN V W A+I+ H+
Sbjct: 131 HAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRY 190
Query: 141 SDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLR 200
+ L F M R ELS + T L+
Sbjct: 191 KEGLTYFSEMS------------------------------RSEELS---DTYTFAIALK 217
Query: 201 ACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVA 260
AC + + K IH I + + L Y CG + + +F NM ERDVV+
Sbjct: 218 ACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVS 277
Query: 261 WSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQ 320
W+SLI AY G+ A+ETF M ++V P++ TF ++ AC+ +L +
Sbjct: 278 WTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACA-------SLSRLVWGE 330
Query: 321 Q------DYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGA-CRT 373
Q GL S + ++ + S G L A + +GM + + +W ++G C+
Sbjct: 331 QLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCR-DIISWSTIIGGYCQA 389
Query: 374 -YGE 376
+GE
Sbjct: 390 GFGE 393
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 149/326 (45%), Gaps = 35/326 (10%)
Query: 23 ISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIHS 82
++WT + V G +++ L F+ + S LS D Y ++ LK+C+ + + + G AIH+
Sbjct: 175 VTWTAIITGLVHAGRYKEGLTYFSEMSRSEELS-DTYTFAIALKACAGLRQVKYGKAIHT 233
Query: 83 HSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSD 142
H I GF++ VA +L MY +C LF+ + +R+VV W ++I Y
Sbjct: 234 HVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKR------ 287
Query: 143 ALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRAC 202
G E KA+ + +MR + PN T ++ AC
Sbjct: 288 ------------------------IGQE---VKAVETFIKMRNSQVPPNEQTFASMFSAC 320
Query: 203 VRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWS 262
++ L +++H + ++ + + +++ Y CG L++AS +F M+ RD+++WS
Sbjct: 321 ASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWS 380
Query: 263 SLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQD 322
++I Y G + F M + P D ++L + + + A +
Sbjct: 381 TIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHA-LALC 439
Query: 323 YGLQPSSDHYSCLVDVLSRAGRLYEA 348
+GL+ +S S L+++ S+ G + EA
Sbjct: 440 FGLEQNSTVRSSLINMYSKCGSIKEA 465
>AT4G32430.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:15652982-15655273 FORWARD
Length = 763
Score = 184 bits (468), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 107/361 (29%), Positives = 172/361 (47%), Gaps = 36/361 (9%)
Query: 77 GAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTH 136
G IH IK GF+S P V + + +Y K + A+K F++I R ++ WNAMIS +
Sbjct: 391 GLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQ 450
Query: 137 SNCVSDALYMF--DAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLIT 194
+ +AL MF A P+ TF +++ +A ED S K
Sbjct: 451 NGFSHEALKMFLSAAAETMPNEYTFGSVLNAIAFAEDISVK------------------- 491
Query: 195 LLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMK 254
+ H ++ ++ P + S L++ Y + G + + VF M
Sbjct: 492 ---------------QGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMS 536
Query: 255 ERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALD 314
+++ W+S+ISAY+ HG+ + + FH M V PD +TFL+VL AC+ G+ D +
Sbjct: 537 QKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYE 596
Query: 315 YFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTY 374
F M + Y L+PS +HYSC+VD+L RAGRL EA +++ +P ++LG+CR +
Sbjct: 597 IFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLH 656
Query: 375 GEVELAEIAGRALFEIEPDNPANYVLLARIYASMGRHGEAXXXXXXXXXXGVKVAPGGSW 434
G V++ E++P+ +YV + IYA +A V G SW
Sbjct: 657 GNVKMGAKVAELAMEMKPELSGSYVQMYNIYAEKEEWDKAAEIRKAMRKKNVSKEAGFSW 716
Query: 435 V 435
+
Sbjct: 717 I 717
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/365 (23%), Positives = 158/365 (43%), Gaps = 47/365 (12%)
Query: 18 NYLRLISWTKQLNSHVKQG-FHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQL 76
++ +ISW L+ ++G F +A+V+F + + LD + V+ +C +L
Sbjct: 236 SFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMRE-GVELDHVSFTSVITTCCHETDLKL 294
Query: 77 GAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTH 136
IH IK G+ S V L+ Y KC + + +F ++ +RNVV W MIS
Sbjct: 295 ARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMIS---- 350
Query: 137 SNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLL 196
+ +D A++ + MR + PN +T +
Sbjct: 351 ------------------------------SNKDD----AVSIFLNMRFDGVYPNEVTFV 376
Query: 197 ALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKER 256
L+ A + +IHG I+ P + + + Y + L +A F ++ R
Sbjct: 377 GLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFR 436
Query: 257 DVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYF 316
++++W+++IS +A +G + AL+ F A+ +P++ TF +VL A + A D ++
Sbjct: 437 EIISWNAMISGFAQNGFSHEALKMFLSA-AAETMPNEYTFGSVLNAIAFA--EDISVKQG 493
Query: 317 ARMQQ---DYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRT 373
R GL S L+D+ ++ G + E+ + M K W +++ A +
Sbjct: 494 QRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQF-VWTSIISAYSS 552
Query: 374 YGEVE 378
+G+ E
Sbjct: 553 HGDFE 557
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 98/182 (53%), Gaps = 6/182 (3%)
Query: 121 QRNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFY 180
+ ++VV N+ I++Y+ S A +FD M D ++N++++GL+ +A+ +
Sbjct: 206 ESDLVVGNSFITMYSRSGSFRGARRVFDEMSF-KDMISWNSLLSGLSQEGTFGFEAVVIF 264
Query: 181 WRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRC 240
M ++ + ++ +++ C T L + ++IHG I+ + ++ + L+ Y +C
Sbjct: 265 RDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKC 324
Query: 241 GCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVL 300
G L +VF+ M ER+VV+W+++IS+ A+ F +M V P+++TF+ ++
Sbjct: 325 GVLEAVKSVFHQMSERNVVSWTTMISS-----NKDDAVSIFLNMRFDGVYPNEVTFVGLI 379
Query: 301 KA 302
A
Sbjct: 380 NA 381
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 103/251 (41%), Gaps = 39/251 (15%)
Query: 56 LDPYVLSLVLKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKL 115
+D L L LK+C + G IH S GF S FV CVS
Sbjct: 76 MDEVTLCLALKACRGDLKR--GCQIHGFSTTSGFTS--FV----------CVS------- 114
Query: 116 FDEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAK 175
NA++ +Y + +AL +F+ + V PD ++N I++G D +
Sbjct: 115 ------------NAVMGMYRKAGRFDNALCIFENL-VDPDVVSWNTILSGF----DDNQI 157
Query: 176 AIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVE 235
A+ F RM+ + + T L CV + ++ ++ ++ + + +
Sbjct: 158 ALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFIT 217
Query: 236 AYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGE-ARSALETFHHMEMAKVLPDDI 294
Y R G A VF M +D+++W+SL+S + G A+ F M V D +
Sbjct: 218 MYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHV 277
Query: 295 TFLAVLKACSH 305
+F +V+ C H
Sbjct: 278 SFTSVITTCCH 288
>AT2G45350.1 | Symbols: CRR4 | CRR4 (CHLORORESPIRATORY REDUCTION 4)
| chr2:18694816-18696636 REVERSE
Length = 606
Score = 180 bits (457), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 104/338 (30%), Positives = 170/338 (50%), Gaps = 1/338 (0%)
Query: 98 ALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDAS 157
+++D Y K A+ LFD +P+R+VV W MI Y V A +FD M D
Sbjct: 250 SMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQM-PHRDVV 308
Query: 158 TFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGC 217
+N+++AG + F +E L P+ TL+ +L A ++ L+ ++H
Sbjct: 309 AYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLY 368
Query: 218 SIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSA 277
+ +L L++ Y +CG + +A VF ++ + + W+++I A+HG SA
Sbjct: 369 IVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESA 428
Query: 278 LETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVD 337
+ +E + PDDITF+ VL ACSH+GL + L F M++ + ++P HY C+VD
Sbjct: 429 FDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVD 488
Query: 338 VLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVELAEIAGRALFEIEPDNPAN 397
+LSR+G + A ++I MPV+ W L AC + E E E+ + L NP++
Sbjct: 489 ILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGYNPSS 548
Query: 398 YVLLARIYASMGRHGEAXXXXXXXXXXGVKVAPGGSWV 435
YVLL+ +YAS G + ++ PG SW+
Sbjct: 549 YVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWI 586
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 101/352 (28%), Positives = 171/352 (48%), Gaps = 26/352 (7%)
Query: 53 ALSLDPYVLSLVLKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSA 112
+S+D + LSLVLK+CS + + G IH K G S+ F+ L+ +Y KC +
Sbjct: 109 GVSVDKFSLSLVLKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLS 168
Query: 113 RKLFDEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMHVA-PDASTFNAIIAGLAGTED 171
R++FD +P+R+ V +N+MI Y + A +FD M + + ++N++I+G A T D
Sbjct: 169 RQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSD 228
Query: 172 GSAKAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRS 231
G A + M E +LI+ +++ V+ + K + R + +
Sbjct: 229 GVDIASKLFADMPE----KDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDV----VTWA 280
Query: 232 GLVEAYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEM-AKVL 290
+++ Y + G + +A +F M RDVVA++S+++ Y + ALE F ME + +L
Sbjct: 281 TMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLL 340
Query: 291 PDDITFLAVLKACSHAGLADDALD---YFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYE 347
PDD T + VL A + G A+D Y Q G + L+D+ S+ G +
Sbjct: 341 PDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLG----VALIDMYSKCGSIQH 396
Query: 348 AYDIIRGMPVKVTVKAWGALLGACRTYGEVELAEIAGRALFEIE-----PDN 394
A + G+ K ++ W A++G +G L E A L +IE PD+
Sbjct: 397 AMLVFEGIENK-SIDHWNAMIGGLAIHG---LGESAFDMLLQIERLSLKPDD 444
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 112/261 (42%), Gaps = 41/261 (15%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
++++ + +V+ +H +AL +F+ ++ L D L +VL + + + R +H
Sbjct: 307 VVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMH 366
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVS 141
+ ++ F + AL+DMY KC S A +F+ I +++ WNAM
Sbjct: 367 LYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAM----------- 415
Query: 142 DALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRA 201
I GLA G + A ++ LSLKP+ IT + +L A
Sbjct: 416 ---------------------IGGLAIHGLGES-AFDMLLQIERLSLKPDDITFVGVLNA 453
Query: 202 CVRMTSLNMIKEIHGC----SIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMK-ER 256
C + ++KE C ++ I+P Q +V+ R G + A N+ M E
Sbjct: 454 C---SHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPVEP 510
Query: 257 DVVAWSSLISAYALHGEARSA 277
+ V W + ++A + H E +
Sbjct: 511 NDVIWRTFLTACSHHKEFETG 531
>AT5G39680.1 | Symbols: EMB2744 | EMB2744 (EMBRYO DEFECTIVE 2744) |
chr5:15884236-15886368 REVERSE
Length = 710
Score = 180 bits (457), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 104/371 (28%), Positives = 165/371 (44%), Gaps = 33/371 (8%)
Query: 65 LKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNV 124
L+ S + L +HS ++ GF + AL++MYGKC A+++FD+ +N+
Sbjct: 244 LRLFSNLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNI 303
Query: 125 VVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMR 184
+ ++ Y +AL +F M
Sbjct: 304 FLNTTIMDAYFQDKSFEEALNLFSKMDTK------------------------------- 332
Query: 185 ELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLI 244
+ PN T LL + ++ L +HG +++ H + + LV Y + G +
Sbjct: 333 --EVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIE 390
Query: 245 NASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACS 304
+A F M RD+V W+++IS + HG R ALE F M +P+ ITF+ VL+ACS
Sbjct: 391 DARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACS 450
Query: 305 HAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAW 364
H G + L YF ++ + + +QP HY+C+V +LS+AG +A D +R P++ V AW
Sbjct: 451 HIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAW 510
Query: 365 GALLGACRTYGEVELAEIAGRALFEIEPDNPANYVLLARIYASMGRHGEAXXXXXXXXXX 424
LL AC L + E P++ YVLL+ I+A
Sbjct: 511 RTLLNACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWEGVAKVRSLMNNR 570
Query: 425 GVKVAPGGSWV 435
GVK PG SW+
Sbjct: 571 GVKKEPGVSWI 581
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 84/379 (22%), Positives = 156/379 (41%), Gaps = 36/379 (9%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
++SW + + GF + L +F + S + +V ++V KSCS R + G H
Sbjct: 100 VVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGKQFH 159
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVS 141
+K G +S+ FV LV MY C A ++ D++P ++ V+++ +S Y
Sbjct: 160 GCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECGAFK 219
Query: 142 DALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRA 201
+ L + ED F W N +T L+ LR
Sbjct: 220 EGLDVLRK-----------------TANED-------FVW---------NNLTYLSSLRL 246
Query: 202 CVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAW 261
+ LN+ ++H +R + + L+ YG+CG ++ A VF + +++
Sbjct: 247 FSNLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLN 306
Query: 262 SSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQ 321
++++ AY AL F M+ +V P++ TF +L + + L D +
Sbjct: 307 TTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQG-DLLHGLVL 365
Query: 322 DYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYG-EVELA 380
G + + LV++ +++G + +A GM + V W ++ C +G E
Sbjct: 366 KSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIV-TWNTMISGCSHHGLGREAL 424
Query: 381 EIAGRALFEIEPDNPANYV 399
E R +F E N ++
Sbjct: 425 EAFDRMIFTGEIPNRITFI 443
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 127/288 (44%), Gaps = 36/288 (12%)
Query: 61 LSLVLKSCSAIHRSQLGAAIHSHSIKMGFLS---NPFVACALVDMYGKCVSTFSARKLFD 117
L+ +LK C+ ++G +IH+H I S + + +L+++Y KC T ARKLFD
Sbjct: 34 LNELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFD 93
Query: 118 EIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAI 177
+P+RNVV W AM+ Y +S + L +F +M + ++
Sbjct: 94 LMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGES--------------------- 132
Query: 178 AFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAY 237
+PN + ++C + K+ HGC ++ + H +R+ LV Y
Sbjct: 133 -----------RPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMY 181
Query: 238 GRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFL 297
C A V ++ D+ +SS +S Y G + L+ + +++T+L
Sbjct: 182 SLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYL 241
Query: 298 AVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRL 345
+ L+ S+ + AL +RM + +G + L+++ + G++
Sbjct: 242 SSLRLFSNLRDLNLALQVHSRMVR-FGFNAEVEACGALINMYGKCGKV 288
>AT5G65570.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:26203968-26206184 FORWARD
Length = 738
Score = 180 bits (457), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 119/404 (29%), Positives = 195/404 (48%), Gaps = 40/404 (9%)
Query: 34 KQGFHQQALVVFNHIQTSLALSLDP--YVLSLVLKSCSAIHRSQLGAAIHSHSIKMGFLS 91
++G +A+ F Q+ L + P Y + VL SC + G IH +K GF S
Sbjct: 244 QKGEDTEAVKAF---QSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFES 300
Query: 92 NPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMH 151
+L+ MY +C + V D+L +F +
Sbjct: 301 ALASQTSLLTMYLRC-------------------------------SLVDDSLRVFKCIE 329
Query: 152 VAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMI 211
P+ ++ ++I+GL I F MR+ S+KPN TL + LR C +
Sbjct: 330 Y-PNQVSWTSLISGLVQNGREEMALIEFRKMMRD-SIKPNSFTLSSALRGCSNLAMFEEG 387
Query: 212 KEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWSSLISAYALH 271
++IHG + D SGL++ YG+CGC A VF + E DV++ +++I +YA +
Sbjct: 388 RQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQN 447
Query: 272 GEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDH 331
G R AL+ F M + P+D+T L+VL AC+++ L ++ + F ++D + ++DH
Sbjct: 448 GFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKD-KIMLTNDH 506
Query: 332 YSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVELAEIAGRALFEIE 391
Y+C+VD+L RAGRL EA +++ + + W LL AC+ + +VE+AE R + EIE
Sbjct: 507 YACMVDLLGRAGRLEEA-EMLTTEVINPDLVLWRTLLSACKVHRKVEMAERITRKILEIE 565
Query: 392 PDNPANYVLLARIYASMGRHGEAXXXXXXXXXXGVKVAPGGSWV 435
P + +L++ +YAS G+ +K P SWV
Sbjct: 566 PGDEGTLILMSNLYASTGKWNRVIEMKSKMKDMKLKKNPAMSWV 609
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 74/323 (22%), Positives = 142/323 (43%), Gaps = 36/323 (11%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
+++W + +K ++A+ ++ + T+ L D Y LS V K+ S + + H
Sbjct: 130 IVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLP-DEYTLSSVFKAFSDLSLEKEAQRSH 188
Query: 82 SHSIKMGF-LSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCV 140
++ +G +SN FV ALVDMY K T A+ + D + +++VV+ A+I Y+
Sbjct: 189 GLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGED 248
Query: 141 SDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLR 200
++A+ F +M V ++PN T ++L
Sbjct: 249 TEAVKAFQSMLVEK---------------------------------VQPNEYTYASVLI 275
Query: 201 ACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVA 260
+C + + K IHG +++ + ++ L+ Y RC + ++ VF ++ + V+
Sbjct: 276 SCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVS 335
Query: 261 WSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQ 320
W+SLIS +G AL F M + P+ T + L+ CS+ + ++ +
Sbjct: 336 WTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVT 395
Query: 321 QDYGLQPSSDHYSCLVDVLSRAG 343
+ YG S L+D+ + G
Sbjct: 396 K-YGFDRDKYAGSGLIDLYGKCG 417
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 116/264 (43%), Gaps = 44/264 (16%)
Query: 19 YLRLISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGA 78
Y +SWT ++ V+ G + AL+ F + ++ + + LS L+ CS + + G
Sbjct: 330 YPNQVSWTSLISGLVQNGREEMALIEFRKMMRD-SIKPNSFTLSSALRGCSNLAMFEEGR 388
Query: 79 AIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSN 138
IH K GF + + L+D+YGKC + AR +FD + + +V+ N MI Y +
Sbjct: 389 QIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNG 448
Query: 139 CVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLAL 198
+AL +F+ RM L L+PN +T+L++
Sbjct: 449 FGREALDLFE---------------------------------RMINLGLQPNDVTVLSV 475
Query: 199 LRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSG-----LVEAYGRCGCLINASNVFYNM 253
L AC + +++E GC + + + + +V+ GR G L A + +
Sbjct: 476 LLAC---NNSRLVEE--GCELFDSFRKDKIMLTNDHYACMVDLLGRAGRLEEAEMLTTEV 530
Query: 254 KERDVVAWSSLISAYALHGEARSA 277
D+V W +L+SA +H + A
Sbjct: 531 INPDLVLWRTLLSACKVHRKVEMA 554
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 94/208 (45%), Gaps = 15/208 (7%)
Query: 198 LLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERD 257
LLR C+ S++ IK I +++ P S LV+A +CG + A VF M ER
Sbjct: 71 LLRQCIDERSISGIKTIQAHMLKSGF-PAEISGSKLVDASLKCGDIDYARQVFDGMSERH 129
Query: 258 VVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFA 317
+V W+SLI+ H ++ A+E + M VLPD+ T +V KA S L +A
Sbjct: 130 IVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEA----- 184
Query: 318 RMQQDYGLQ-----PSSDHY--SCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGA 370
Q+ +GL S+ + S LVD+ + G+ EA ++ + K V ++G
Sbjct: 185 --QRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGY 242
Query: 371 CRTYGEVELAEIAGRALFEIEPDNPANY 398
+ + E + L E N Y
Sbjct: 243 SQKGEDTEAVKAFQSMLVEKVQPNEYTY 270
>AT5G42450.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:16977660-16978850 FORWARD
Length = 396
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 114/359 (31%), Positives = 186/359 (51%), Gaps = 15/359 (4%)
Query: 87 MGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSDALYM 146
MG SN FV A+++ Y K + AR+ FD+ NVV +IS Y + +AL +
Sbjct: 1 MGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSITNLISGYLKKHEFEEALSL 60
Query: 147 FDAMHVAPDAS--TFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRACVR 204
F AM P+ S T+NA+I G + T F +RE + PN T + A
Sbjct: 61 FRAM---PERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITAISN 117
Query: 205 MTSLNMIKEIHGCSIRNHIDPHPQL--RSGLVEAYGRCGCLINASNVFYNMKE--RDVVA 260
+ S K IH C+I+ + + + L+ Y +CG + ++ F ++E R++V+
Sbjct: 118 IASHGAGKSIHACAIK-FLGKRFNVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVS 176
Query: 261 WSSLISAYALHGEARSALETFHHM-EMAKVLPDDITFLAVLKACSHAGLADDALDYFARM 319
W+S+I YA +G A+ F M + + P+++T L VL AC+HAGL + YF +
Sbjct: 177 WNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACNHAGLIQEGYMYFNKA 236
Query: 320 QQDYGLQPSS---DHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGE 376
DY P+ +HY+C+VD+LSR+GR EA ++I+ MP+ + W ALLG C+ +
Sbjct: 237 VNDYD-DPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLDPGIGFWKALLGGCQIHSN 295
Query: 377 VELAEIAGRALFEIEPDNPANYVLLARIYASMGRHGEAXXXXXXXXXXGVKVAPGGSWV 435
LA++A + E++P + ++YV+L+ Y++M G+K G SW+
Sbjct: 296 KRLAKLAASKILELDPRDVSSYVMLSNAYSAMENWQNVSLIRRKMKETGLKRFTGCSWI 354
>AT3G21470.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:7563746-7565074 FORWARD
Length = 442
Score = 179 bits (453), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 103/274 (37%), Positives = 168/274 (61%), Gaps = 11/274 (4%)
Query: 112 ARKLFDEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTED 171
ARK F++IP++N VW+ M+S Y V +A +F + A D +N +IAG A ++
Sbjct: 115 ARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRV-FARDLVIWNTLIAGYA--QN 171
Query: 172 G-SAKAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNH--IDPHPQ 228
G S AI ++ M+ +P+ +T+ ++L AC + L++ +E+H S+ NH I+ +
Sbjct: 172 GYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVH--SLINHRGIELNQF 229
Query: 229 LRSGLVEAYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAK 288
+ + L++ Y +CG L NA++VF ++ R V +S+IS A+HG+ + ALE F ME
Sbjct: 230 VSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLD 289
Query: 289 VLPDDITFLAVLKACSHAGLADDALDYFARMQ-QDYGLQPSSDHYSCLVDVLSRAGRLYE 347
+ PD+ITF+AVL AC H G + L F+ M+ QD ++P+ H+ CL+ +L R+G+L E
Sbjct: 290 LKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQD--VKPNVKHFGCLIHLLGRSGKLKE 347
Query: 348 AYDIIRGMPVKVTVKAWGALLGACRTYGEVELAE 381
AY +++ M VK GALLGAC+ + + E+AE
Sbjct: 348 AYRLVKEMHVKPNDTVLGALLGACKVHMDTEMAE 381
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 129/268 (48%), Gaps = 16/268 (5%)
Query: 95 VACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMHVAP 154
V +L+ MYGKC SARK+FDE+P+RNV WNAMI Y + A +F+ + V
Sbjct: 2 VGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGLFEEISVCR 61
Query: 155 DASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEI 214
+ T+ +I G G KA + RM LK N+ +L V +
Sbjct: 62 NTVTWIEMIKGY-GKRIEIEKARELFERM-PFELK-NVKAWSVMLGVYVNNRKME----- 113
Query: 215 HGCSIRNHIDPHPQ----LRSGLVEAYGRCGCLINASNVFYNMKERDVVAWSSLISAYAL 270
R + P+ + S ++ Y R G + A +FY + RD+V W++LI+ YA
Sbjct: 114 ---DARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQ 170
Query: 271 HGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSD 330
+G + A++ F +M+ PD +T ++L AC+ +G D + + + G++ +
Sbjct: 171 NGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINH-RGIELNQF 229
Query: 331 HYSCLVDVLSRAGRLYEAYDIIRGMPVK 358
+ L+D+ ++ G L A + + V+
Sbjct: 230 VSNALIDMYAKCGDLENATSVFESISVR 257
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 109/272 (40%), Gaps = 45/272 (16%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
L+ W + + + G+ A+ F ++Q D +S +L +C+ R +G +H
Sbjct: 158 LVIWNTLIAGYAQNGYSDDAIDAFFNMQGE-GYEPDAVTVSSILSACAQSGRLDVGREVH 216
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVS 141
S G N FV+ AL+DMY KC +A +F+ I R+V N+MIS
Sbjct: 217 SLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGK 276
Query: 142 DALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRA 201
+AL MF M L LKP+ IT +A+L A
Sbjct: 277 EALEMFSTME---------------------------------SLDLKPDEITFIAVLTA 303
Query: 202 CVR----MTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNM--KE 255
CV M L + E+ ++ P+ + L+ GR G L A + M K
Sbjct: 304 CVHGGFLMEGLKIFSEMKTQDVK----PNVKHFGCLIHLLGRSGKLKEAYRLVKEMHVKP 359
Query: 256 RDVVAWSSLISAYALHGEARSALETFHHMEMA 287
D V +L+ A +H + A + +E A
Sbjct: 360 NDTVL-GALLGACKVHMDTEMAEQVMKIIETA 390
>AT3G25060.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:9128516-9130321 FORWARD
Length = 601
Score = 178 bits (452), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 103/412 (25%), Positives = 195/412 (47%), Gaps = 35/412 (8%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
+I WT + + G +A+ + +Q D V+ +L++ + +++G ++H
Sbjct: 182 VICWTTMVTGFAQAGKSLKAVEFYREMQNE-GFGRDRVVMLGLLQASGDLGDTKMGRSVH 240
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVS 141
+ + G N V +LVDMY K A ++F + + V W ++IS + + +
Sbjct: 241 GYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLAN 300
Query: 142 DALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRA 201
A F A++ M+ L +P+L+TL+ +L A
Sbjct: 301 KA---------------FEAVV------------------EMQSLGFQPDLVTLVGVLVA 327
Query: 202 CVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAW 261
C ++ SL + +H ++ H+ + L++ Y +CG L ++ +F ++ +D+V W
Sbjct: 328 CSQVGSLKTGRLVHCYILKRHVLDRVT-ATALMDMYSKCGALSSSREIFEHVGRKDLVCW 386
Query: 262 SSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQ 321
+++IS Y +HG + + F M + + PD TF ++L A SH+GL + +F+ M
Sbjct: 387 NTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSALSHSGLVEQGQHWFSVMIN 446
Query: 322 DYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVELAE 381
Y +QPS HY CL+D+L+RAGR+ EA D+I + + W ALL C + + + +
Sbjct: 447 KYKIQPSEKHYVCLIDLLARAGRVEEALDMINSEKLDNALPIWVALLSGCINHRNLSVGD 506
Query: 382 IAGRALFEIEPDNPANYVLLARIYASMGRHGEAXXXXXXXXXXGVKVAPGGS 433
IA + ++ PD+ L++ +A+ + E ++ PG S
Sbjct: 507 IAANKILQLNPDSIGIQTLVSNFFATANKWKEVAKVRKLMRNGAMEKVPGYS 558
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 111/251 (44%), Gaps = 33/251 (13%)
Query: 57 DPYVLSLVLKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLF 116
D ++ +K+C + + G A+ ++ G+ ++ FV +++++Y KC A LF
Sbjct: 115 DSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLF 174
Query: 117 DEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKA 176
++ +R+V+ W M++ + + S KA
Sbjct: 175 GKMAKRDVICWTTMVTGFAQAG---------------------------------KSLKA 201
Query: 177 IAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEA 236
+ FY M+ + + +L LL+A + M + +HG R + + + + LV+
Sbjct: 202 VEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDM 261
Query: 237 YGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITF 296
Y + G + AS VF M + V+W SLIS +A +G A A E M+ PD +T
Sbjct: 262 YAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTL 321
Query: 297 LAVLKACSHAG 307
+ VL ACS G
Sbjct: 322 VGVLVACSQVG 332
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 148/340 (43%), Gaps = 65/340 (19%)
Query: 65 LKSCSAIHRSQLGAAIHSHSIKMG-FLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRN 123
L+S S + R IH+ I G L+ ++ L+ G+ ARK+FDE+PQR
Sbjct: 23 LQSISKLKRHI--TQIHAFVISTGNLLNGSSISRDLIASCGRIGEISYARKVFDELPQRG 80
Query: 124 VVVWNAMISLYTHSNCVSDALYMFDAM---HVAPDASTFNAII-AGLAG--TEDGSA--- 174
V V+N+MI +Y+ + L ++D M + PD+STF I A L+G E G A
Sbjct: 81 VSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWC 140
Query: 175 KAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLV 234
KA+ F ++ ++ C S ++
Sbjct: 141 KAVDFGYK-----------------------------NDVFVC-------------SSVL 158
Query: 235 EAYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDI 294
Y +CG + A +F M +RDV+ W+++++ +A G++ A+E + M+ D +
Sbjct: 159 NLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRV 218
Query: 295 TFLAVLKACSHAG---LADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDI 351
L +L+A G + Y R GL + + LVD+ ++ G + A +
Sbjct: 219 VMLGLLQASGDLGDTKMGRSVHGYLYRT----GLPMNVVVETSLVDMYAKVGFIEVASRV 274
Query: 352 IRGMPVKVTVKAWGALLGACRTYGEVELAEIAGRALFEIE 391
M K V +WG+L+ + + LA A A+ E++
Sbjct: 275 FSRMMFKTAV-SWGSLISG---FAQNGLANKAFEAVVEMQ 310
>AT3G18970.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:6543699-6545117 REVERSE
Length = 472
Score = 176 bits (447), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 112/373 (30%), Positives = 174/373 (46%), Gaps = 40/373 (10%)
Query: 75 QLGAAIHSHSIKMGFL-SNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISL 133
++G +H K+GFL + + L+ Y K ARK+FDE+P+R V WNAMI
Sbjct: 128 RVGRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGG 187
Query: 134 YTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMR--ELSLKPN 191
Y D NA KA+ + R ++P
Sbjct: 188 YCSHK----------------DKGNHNA------------RKAMVLFRRFSCCGSGVRPT 219
Query: 192 LITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSG--LVEAYGRCGCLINASNV 249
T++ +L A + L + +HG + P + G LV+ Y +CGCL NA +V
Sbjct: 220 DTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSV 279
Query: 250 FYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLA 309
F MK ++V W+S+ + AL+G + M + + P++ITF ++L A H GL
Sbjct: 280 FELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTSLLSAYRHIGLV 339
Query: 310 DDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLG 369
++ ++ F M+ +G+ P +HY C+VD+L +AGR+ EAY I MP+K +L
Sbjct: 340 EEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFILAMPIKPDAILLRSLCN 399
Query: 370 ACRTYGEVELAEIAGRALFEIEPDNPA-------NYVLLARIYASMGRHGEAXXXXXXXX 422
AC YGE + E G+AL EIE ++ +YV L+ + A G+ E
Sbjct: 400 ACSIYGETVMGEEIGKALLEIEREDEKLSGSECEDYVALSNVLAHKGKWVEVEKLRKEMK 459
Query: 423 XXGVKVAPGGSWV 435
+K PG S+V
Sbjct: 460 ERRIKTRPGYSFV 472
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 71/153 (46%), Gaps = 11/153 (7%)
Query: 23 ISWTKQLN---SHVKQGFH--QQALVVFNHIQT-SLALSLDPYVLSLVLKSCSAIHRSQL 76
++W + SH +G H ++A+V+F + + VL + S ++
Sbjct: 179 VTWNAMIGGYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEI 238
Query: 77 GAAIHSHSIKMGFLS--NPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAM---I 131
G+ +H + K+GF + F+ ALVDMY KC +A +F+ + +NV W +M +
Sbjct: 239 GSLVHGYIEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGL 298
Query: 132 SLYTHSNCVSDALYMFDAMHVAPDASTFNAIIA 164
+L N + L + P+ TF ++++
Sbjct: 299 ALNGRGNETPNLLNRMAESGIKPNEITFTSLLS 331
>AT3G26630.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:9791572-9792939 REVERSE
Length = 455
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 99/318 (31%), Positives = 172/318 (54%), Gaps = 3/318 (0%)
Query: 39 QQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACA 98
++AL++F + S D + V+K+C A +LG +H +IK GF ++ F
Sbjct: 100 REALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFFNDVFFQNT 159
Query: 99 LVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDAST 158
L+D+Y KC S RK+FD++P R++V W M+ ++ + A +F+ M + + +
Sbjct: 160 LMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMR-NVVS 218
Query: 159 FNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCS 218
+ A+I +A + RM+ +KPN T++ LL+A ++ SL+M + +H +
Sbjct: 219 WTAMITAYVKNRRPD-EAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYA 277
Query: 219 IRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSAL 278
+N L + L++ Y +CG L +A VF M+ + + W+S+I++ +HG AL
Sbjct: 278 HKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCGEEAL 337
Query: 279 ETF-HHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVD 337
F E A V PD ITF+ VL AC++ G D L YF RM Q YG+ P +H +C++
Sbjct: 338 SLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQVYGISPIREHNACMIQ 397
Query: 338 VLSRAGRLYEAYDIIRGM 355
+L +A + +A +++ M
Sbjct: 398 LLEQALEVEKASNLVESM 415
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 91/167 (54%), Gaps = 8/167 (4%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
++SWT + ++VK +A +F +Q + + + + +L++ + + +G +H
Sbjct: 216 VVSWTAMITAYVKNRRPDEAFQLFRRMQVD-DVKPNEFTIVNLLQASTQLGSLSMGRWVH 274
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVS 141
++ K GF+ + F+ AL+DMY KC S ARK+FD + +++ WN+MI+ C
Sbjct: 275 DYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCGE 334
Query: 142 DALYMFDAM----HVAPDASTFNAIIAGLAGTEDGSAK-AIAFYWRM 183
+AL +F+ M V PDA TF +++ A T G+ K + ++ RM
Sbjct: 335 EALSLFEEMEEEASVEPDAITFVGVLSACANT--GNVKDGLRYFTRM 379
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/352 (20%), Positives = 141/352 (40%), Gaps = 82/352 (23%)
Query: 62 SLVLKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQ 121
S L++CS SQL IH+ IK ++ + L+ + T A +F+++
Sbjct: 24 SYFLRTCSNF--SQL-KQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQS 80
Query: 122 RNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYW 181
+ WN MI + ++ +AL +F M ++ S F+
Sbjct: 81 PSTFTWNLMIRSLSVNHKPREALLLFILMMIS-HQSQFDKF------------------- 120
Query: 182 RMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCG 241
T +++AC+ +S+ + ++HG +I+ ++ L++ Y +CG
Sbjct: 121 ------------TFPFVIKACLASSSIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCG 168
Query: 242 -------------------------------CLINASNVFYNMKERDVVAWSSLISAYAL 270
L +A VF M R+VV+W+++I+AY
Sbjct: 169 KPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVK 228
Query: 271 HGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQDY----GLQ 326
+ A + F M++ V P++ T + +L+A + G R DY G
Sbjct: 229 NRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLS-----MGRWVHDYAHKNGFV 283
Query: 327 PSSDHYSCLVDVLSRAGRLYEA---YDIIRGMPVKVTVKAWGALLGACRTYG 375
+ L+D+ S+ G L +A +D+++G ++ W +++ + +G
Sbjct: 284 LDCFLGTALIDMYSKCGSLQDARKVFDVMQGK----SLATWNSMITSLGVHG 331
>AT4G38010.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:17859582-17861261 REVERSE
Length = 559
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 116/417 (27%), Positives = 202/417 (48%), Gaps = 40/417 (9%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
++SWT + + G +++AL F+ + L+ YV LV S + LG IH
Sbjct: 172 VVSWTGIITGFTRTGLYKEALDTFSKMDVEPNLA--TYVCVLV--SSGRVGCLSLGKGIH 227
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVS 141
+K L + + NA+I +Y +S
Sbjct: 228 GLILKRASLIS-------------------------------LETGNALIDMYVKCEQLS 256
Query: 142 DALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELS-LKPNLITLLALLR 200
DA+ +F + D ++N++I+GL E S +AI + M+ S +KP+ L ++L
Sbjct: 257 DAMRVFGELE-KKDKVSWNSMISGLVHCER-SKEAIDLFSLMQTSSGIKPDGHILTSVLS 314
Query: 201 ACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVA 260
AC + +++ + +H + I + + +V+ Y +CG + A +F ++ ++V
Sbjct: 315 ACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFT 374
Query: 261 WSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQ 320
W++L+ A+HG +L F M P+ +TFLA L AC H GL D+ YF +M+
Sbjct: 375 WNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMK 434
Query: 321 -QDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEV-E 378
++Y L P +HY C++D+L RAG L EA ++++ MPVK V+ GA+L AC+ G + E
Sbjct: 435 SREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRICGAILSACKNRGTLME 494
Query: 379 LAEIAGRALFEIEPDNPANYVLLARIYASMGRHGEAXXXXXXXXXXGVKVAPGGSWV 435
L + + +IE ++ YVLL+ I+A+ R + G+ PG S++
Sbjct: 495 LPKEILDSFLDIEFEDSGVYVLLSNIFAANRRWDDVARIRRLMKVKGISKVPGSSYI 551
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 147/330 (44%), Gaps = 47/330 (14%)
Query: 51 SLALSLDPYVLSLVLKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTF 110
S S D + V K+C + G IH KMGF + +V +LV YG C +
Sbjct: 99 SNGFSPDMFTFPPVFKACGKFSGIREGKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESR 158
Query: 111 SARKLFDEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTE 170
+A K+F E+P R+VV W +I+ +T + +AL F M V
Sbjct: 159 NACKVFGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSKMDV------------------ 200
Query: 171 DGSAKAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLR 230
+PNL T + +L + R+ L++ K IHG ++ +
Sbjct: 201 ------------------EPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETG 242
Query: 231 SGLVEAYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAK-V 289
+ L++ Y +C L +A VF ++++D V+W+S+IS ++ A++ F M+ + +
Sbjct: 243 NALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGI 302
Query: 290 LPDDITFLAVLKACSHAGLADDALDYFARMQQDY----GLQPSSDHYSCLVDVLSRAGRL 345
PD +VL AC+ G D R +Y G++ + + +VD+ ++ G +
Sbjct: 303 KPDGHILTSVLSACASLGAVDH-----GRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYI 357
Query: 346 YEAYDIIRGMPVKVTVKAWGALLGACRTYG 375
A +I G+ K V W ALLG +G
Sbjct: 358 ETALEIFNGIRSK-NVFTWNALLGGLAIHG 386
>AT2G17210.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:7485398-7487602 REVERSE
Length = 715
Score = 173 bits (438), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 122/420 (29%), Positives = 199/420 (47%), Gaps = 46/420 (10%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
++SW L V + +AL +F H+ A+ +D + +L+ C + +IH
Sbjct: 293 IVSWNSILAGFVHNQRYDEALEMF-HLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIH 351
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVS 141
I+ G+ SN +L+D Y C A + D + ++VV + MIS H
Sbjct: 352 GVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAH----- 406
Query: 142 DALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRA 201
AG D +AI+ + MR+ PN IT+++LL A
Sbjct: 407 -------------------------AGRSD---EAISIFCHMRD---TPNAITVISLLNA 435
Query: 202 CVRMTSLNMIKEIHGCSIRNHIDPHP-QLRSGLVEAYGRCGCLINASNVFYNMKERDVVA 260
C L K HG +IR + + + + +V+AY +CG + A F + E+++++
Sbjct: 436 CSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIIS 495
Query: 261 WSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARM- 319
W+ +ISAYA++G AL F M+ P+ +T+LA L AC+H GL L F M
Sbjct: 496 WTVIISAYAINGLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMV 555
Query: 320 QQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMP--VKVTVKAWGALLGACRTYGE- 376
++D+ +PS HYSC+VD+LSRAG + A ++I+ +P VK AWGA+L CR +
Sbjct: 556 EEDH--KPSLQHYSCIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAILSGCRNRFKK 613
Query: 377 -VELAEIAGRALFEIEPDNPANYVLLARIYASMGRHGEAXXXXXXXXXXGVKVAPGGSWV 435
+ +E+ L E+EP + Y+L + +A+ + V+V G S V
Sbjct: 614 LIITSEVVAEVL-ELEPLCSSGYLLASSTFAAEKSWEDVAMMRRLVKERKVRVVAGYSMV 672
Score = 118 bits (296), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 139/284 (48%), Gaps = 37/284 (13%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
+ISW+ + S+V+ L +F + D ++ VLK+C+ + +G ++H
Sbjct: 190 VISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVH 249
Query: 82 SHSIKMGF-LSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCV 140
SI+ GF L++ FV +L+DMY K SA ++FDE RN+V WN++++ + H+
Sbjct: 250 GFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRY 309
Query: 141 SDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLR 200
+AL MF H+ M + +++ + +T+++LLR
Sbjct: 310 DEALEMF---HL------------------------------MVQEAVEVDEVTVVSLLR 336
Query: 201 ACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVA 260
C K IHG IR + + S L++AY C + +A V +M +DVV+
Sbjct: 337 VCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVS 396
Query: 261 WSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACS 304
S++IS A G + A+ F HM + P+ IT +++L ACS
Sbjct: 397 CSTMISGLAHAGRSDEAISIFCHM---RDTPNAITVISLLNACS 437
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 130/282 (46%), Gaps = 37/282 (13%)
Query: 23 ISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIHS 82
+SW + + GF ++ L F+ ++ + L LV+ +C ++ G IH
Sbjct: 93 VSWNVIVFGLLDYGFEEEGLWWFSKLRV-WGFEPNTSTLVLVIHACRSLWFD--GEKIHG 149
Query: 83 HSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSD 142
+ I+ GF V +++ MY + SARKLFDE+ +R+V+ W+ +I Y S
Sbjct: 150 YVIRSGFCGISSVQNSILCMYADS-DSLSARKLFDEMSERDVISWSVVIRSYVQSKEPVV 208
Query: 143 ALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRAC 202
L +F M + E +P+ +T+ ++L+AC
Sbjct: 209 GLKLFKEM--------------------------------VHEAKTEPDCVTVTSVLKAC 236
Query: 203 VRMTSLNMIKEIHGCSIRNHID-PHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAW 261
M +++ + +HG SIR D + + L++ Y + + +A VF R++V+W
Sbjct: 237 TVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSW 296
Query: 262 SSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKAC 303
+S+++ + + ALE FH M V D++T +++L+ C
Sbjct: 297 NSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVC 338
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 124/290 (42%), Gaps = 64/290 (22%)
Query: 22 LISWTKQLNSHVKQ----GFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLG 77
L S + L+S +KQ G ++ + ++ IQ + DP+V +V K+C+
Sbjct: 5 LCSKLQALSSKIKQASVSGKWREVVSGYSEIQRAGVQFNDPFVFPIVFKACA-------- 56
Query: 78 AAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHS 137
K+ +L F ++ D Y KC S + FD + R+ V W
Sbjct: 57 --------KLSWL---FQGNSIADFYMKCGDLCSGLREFDCMNSRDSVSW---------- 95
Query: 138 NCVSDALYMFDAMHVAPDASTFNAIIAGLA--GTEDGSAKAIAFYWRMRELSLKPNLITL 195
N I+ GL G E+ + + ++ ++R +PN TL
Sbjct: 96 ----------------------NVIVFGLLDYGFEE---EGLWWFSKLRVWGFEPNTSTL 130
Query: 196 LALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKE 255
+ ++ AC + ++IHG IR+ +++ ++ Y L +A +F M E
Sbjct: 131 VLVIHACRSLWFDG--EKIHGYVIRSGFCGISSVQNSILCMYADSDSL-SARKLFDEMSE 187
Query: 256 RDVVAWSSLISAYALHGEARSALETFHHM-EMAKVLPDDITFLAVLKACS 304
RDV++WS +I +Y E L+ F M AK PD +T +VLKAC+
Sbjct: 188 RDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACT 237
>AT3G61170.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:22638691-22641237 REVERSE
Length = 783
Score = 172 bits (436), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 108/416 (25%), Positives = 189/416 (45%), Gaps = 72/416 (17%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
++SW + V+QG +AL +F + + +D + + +L +C A+ R+++ A
Sbjct: 293 VVSWNSMIVGCVRQGLIGEALSMFGRMHER-DMKIDDFTIPSIL-NCFALSRTEMKIASS 350
Query: 82 SHS--IKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNC 139
+H +K G+ + V ALVDMY K SA K+F+ + +++V+ W A+++ TH+
Sbjct: 351 AHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGS 410
Query: 140 VSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALL 199
+AL + + MR + P+ I ++L
Sbjct: 411 YDEALKL---------------------------------FCNMRVGGITPDKIVTASVL 437
Query: 200 RACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVV 259
A +T L +++HG I++ + + LV Y +CG L +A+ +F +M+ RD++
Sbjct: 438 SASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLI 497
Query: 260 AWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARM 319
W+ LI YA +G L +DA YF M
Sbjct: 498 TWTCLIVGYAKNG-----------------------------------LLEDAQRYFDSM 522
Query: 320 QQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVEL 379
+ YG+ P +HY+C++D+ R+G + ++ M V+ W A+L A R +G +E
Sbjct: 523 RTVYGITPGPEHYACMIDLFGRSGDFVKVEQLLHQMEVEPDATVWKAILAASRKHGNIEN 582
Query: 380 AEIAGRALFEIEPDNPANYVLLARIYASMGRHGEAXXXXXXXXXXGVKVAPGGSWV 435
E A + L E+EP+N YV L+ +Y++ GR EA + PG SWV
Sbjct: 583 GERAAKTLMELEPNNAVPYVQLSNMYSAAGRQDEAANVRRLMKSRNISKEPGCSWV 638
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 99/397 (24%), Positives = 178/397 (44%), Gaps = 48/397 (12%)
Query: 23 ISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIHS 82
++WT L + + GF +A+ F ++ S + Y VL +C+++ ++G +H
Sbjct: 193 VTWTSMLTGYSQNGFAFKAIECFRDLRREGNQS-NQYTFPSVLTACASVSACRVGVQVHC 251
Query: 83 HSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSD 142
+K GF +N +V AL+DMY KC SAR L + + +VV WN+MI + +
Sbjct: 252 CIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGE 311
Query: 143 ALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRAC 202
AL MF MH D + I P+++ AL R
Sbjct: 312 ALSMFGRMH-ERDMKIDDFTI--------------------------PSILNCFALSR-- 342
Query: 203 VRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWS 262
T + + H ++ + + + LV+ Y + G + +A VF M E+DV++W+
Sbjct: 343 ---TEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWT 399
Query: 263 SLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQD 322
+L++ +G AL+ F +M + + PD I +VL A + L L++ ++ +
Sbjct: 400 ALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTL----LEFGQQVHGN 455
Query: 323 Y---GLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVEL 379
Y G S + LV + ++ G L +A I M ++ + W L+ G +E
Sbjct: 456 YIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLI-TWTCLIVGYAKNGLLED 514
Query: 380 AE---IAGRALFEIEPDNPANYVLLARIYASMGRHGE 413
A+ + R ++ I P P +Y + ++ GR G+
Sbjct: 515 AQRYFDSMRTVYGITP-GPEHYACMIDLF---GRSGD 547
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 150/301 (49%), Gaps = 10/301 (3%)
Query: 76 LGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYT 135
G+ IHS++ + SN L+ K AR++FD++P+R+ WN MI Y+
Sbjct: 16 FGSCIHSYADRTKLHSN-----LLLGDLSKSGRVDEARQMFDKMPERDEFTWNTMIVAYS 70
Query: 136 HSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITL 195
+S +SDA +F + V + ++NA+I+G + +A +W M+ +KPN TL
Sbjct: 71 NSRRLSDAEKLFRSNPV-KNTISWNALISGYCKS-GSKVEAFNLFWEMQSDGIKPNEYTL 128
Query: 196 LALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMK- 254
++LR C + L ++IHG +I+ D + +GL+ Y +C + A +F M+
Sbjct: 129 GSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEG 188
Query: 255 ERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALD 314
E++ V W+S+++ Y+ +G A A+E F + + TF +VL AC+ +
Sbjct: 189 EKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQ 248
Query: 315 YFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTY 374
+ + G + + S L+D+ ++ + A ++ GM V V +W +++ C
Sbjct: 249 VHCCIVKS-GFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVV-SWNSMIVGCVRQ 306
Query: 375 G 375
G
Sbjct: 307 G 307
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 80/349 (22%), Positives = 157/349 (44%), Gaps = 40/349 (11%)
Query: 23 ISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIHS 82
ISW ++ + K G +A +F +Q+ + + Y L VL+ C+++ G IH
Sbjct: 91 ISWNALISGYCKSGSKVEAFNLFWEMQSD-GIKPNEYTLGSVLRMCTSLVLLLRGEQIHG 149
Query: 83 HSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSD 142
H+IK GF +V V N ++++Y +S+
Sbjct: 150 HTIKTGF-------------------------------DLDVNVVNGLLAMYAQCKRISE 178
Query: 143 ALYMFDAMHVAPDASTFNAIIAGLAGTEDGSA-KAIAFYWRMRELSLKPNLITLLALLRA 201
A Y+F+ M + T+ +++ G +++G A KAI + +R + N T ++L A
Sbjct: 179 AEYLFETMEGEKNNVTWTSMLTGY--SQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTA 236
Query: 202 CVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAW 261
C +++ + ++H C +++ + ++S L++ Y +C + +A + M+ DVV+W
Sbjct: 237 CASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSW 296
Query: 262 SSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLK--ACSHAGLADDALDYFARM 319
+S+I G AL F M + DD T ++L A S + + + +
Sbjct: 297 NSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIV 356
Query: 320 QQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALL 368
+ Y ++ LVD+ ++ G + A + GM ++ V +W AL+
Sbjct: 357 KTGYATYKLVNN--ALVDMYAKRGIMDSALKVFEGM-IEKDVISWTALV 402
>AT2G39620.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:16518968-16521478 REVERSE
Length = 836
Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 99/343 (28%), Positives = 181/343 (52%), Gaps = 34/343 (9%)
Query: 57 DPYVLSLVLKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLF 116
D + +L++C+ G+ ++ IK GF S VA AL++M+ KC + +A LF
Sbjct: 501 DSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLF 560
Query: 117 DEIP-QRNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAK 175
D+ +++ V WN M++ Y ++ G A +
Sbjct: 561 DKCGFEKSTVSWNIMMNGY---------------------------LLHGQA------EE 587
Query: 176 AIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVE 235
A+A + +M+ +PN +T + ++RA +++L + +H I+ + + LV+
Sbjct: 588 AVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVGNSLVD 647
Query: 236 AYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDIT 295
Y +CG + ++ F + + +V+W++++SAYA HG A A+ F M+ ++ PD ++
Sbjct: 648 MYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSMQENELKPDSVS 707
Query: 296 FLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGM 355
FL+VL AC HAGL ++ F M + + ++ +HY+C+VD+L +AG EA +++R M
Sbjct: 708 FLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEVEHYACMVDLLGKAGLFGEAVEMMRRM 767
Query: 356 PVKVTVKAWGALLGACRTYGEVELAEIAGRALFEIEPDNPANY 398
VK +V WGALL + R + + L+ A L ++EP NP++Y
Sbjct: 768 RVKTSVGVWGALLNSSRMHCNLWLSNAALCQLVKLEPLNPSHY 810
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 101/415 (24%), Positives = 178/415 (42%), Gaps = 74/415 (17%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
++ W + + + G H++AL F ++ + D Y + LK+C+ + G IH
Sbjct: 64 VVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIH 123
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVS 141
+MG S+ ++ ALV+MY K SAR++FD++ ++VV WN M+S + C S
Sbjct: 124 DLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSS 183
Query: 142 DALYMFDAM--------HVA-----PDASTFNA----------------IIAGLAGTEDG 172
AL +F M HV+ P S I A +G D
Sbjct: 184 AALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIFAFSSGLIDM 243
Query: 173 SAKAIAFY---------WRMRELS------------LKPNLITLLALLRAC-VRMTSL-- 208
Y WR E S ++ L L+R VRM +
Sbjct: 244 YCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAA 303
Query: 209 -----------NMIKEI--HGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKE 255
+++K I H +++ + + + L+ Y +CG L A +F N+++
Sbjct: 304 ASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIED 363
Query: 256 RDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALD- 314
RDVV+WS++I++Y G+ A+ F M + P+ +T +VL+ C AG+A L
Sbjct: 364 RDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGC--AGVAASRLGK 421
Query: 315 --YFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGAL 367
+ ++ D ++ + + ++ + ++ GR A +P+K V A+ AL
Sbjct: 422 SIHCYAIKAD--IESELETATAVISMYAKCGRFSPALKAFERLPIKDAV-AFNAL 473
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 91/397 (22%), Positives = 169/397 (42%), Gaps = 58/397 (14%)
Query: 24 SWTKQLNSHVKQGFHQQALVVF----------NHIQTSLALSLDPYVLSLVLKSCSAIHR 73
SW + ++ GF ++ L +F N + + AL YV LV
Sbjct: 267 SWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVK-------- 318
Query: 74 SQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISL 133
G AIH ++++ G + + VA +L+ MY KC A +LF I R+VV W+AMI+
Sbjct: 319 ---GIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIAS 375
Query: 134 YTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLI 193
Y AG D +AI+ + M + +KPN +
Sbjct: 376 YEQ------------------------------AGQHD---EAISLFRDMMRIHIKPNAV 402
Query: 194 TLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNM 253
TL ++L+ C + + + K IH +I+ I+ + + ++ Y +CG A F +
Sbjct: 403 TLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERL 462
Query: 254 KERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSH-AGLADDA 312
+D VA+++L Y G+A A + + +M++ V PD T + +L+ C+ + A +
Sbjct: 463 PIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGS 522
Query: 313 LDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACR 372
Y ++ + + H L+++ ++ L A + + + +W ++
Sbjct: 523 CVYGQIIKHGFDSECHVAH--ALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYL 580
Query: 373 TYGEVELAEIAGRAL-FEIEPDNPANYVLLARIYASM 408
+G+ E A R + E N +V + R A +
Sbjct: 581 LHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAEL 617
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/412 (23%), Positives = 184/412 (44%), Gaps = 64/412 (15%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSL--VLKSCSAIHRSQLGAA 79
++SW+ + S+ + G H +A+ +F + + + + P ++L VL+ C+ + S+LG +
Sbjct: 366 VVSWSAMIASYEQAGQHDEAISLFRDM---MRIHIKPNAVTLTSVLQGCAGVAASRLGKS 422
Query: 80 IHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNC 139
IH ++IK S A A++ MY KC A K F+ +P ++ V +NA+ YT
Sbjct: 423 IHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQ--- 479
Query: 140 VSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALL 199
+ DA FD Y M+ + P+ T++ +L
Sbjct: 480 IGDANKAFDV------------------------------YKNMKLHGVCPDSRTMVGML 509
Query: 200 RACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMK-ERDV 258
+ C + ++G I++ D + L+ + +C L A +F E+
Sbjct: 510 QTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKST 569
Query: 259 VAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFAR 318
V+W+ +++ Y LHG+A A+ TF M++ K P+ +TF+ +++A + + +
Sbjct: 570 VSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSS 629
Query: 319 MQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVE 378
+ Q G + + LVD+ ++ G + + + K V +W +L A +G
Sbjct: 630 LIQ-CGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIV-SWNTMLSAYAAHG--- 684
Query: 379 LAEIAGRALF------EIEPDNPANYVLLA------------RIYASMG-RH 411
LA A +LF E++PD+ + +L+ RI+ MG RH
Sbjct: 685 LASCA-VSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERH 735
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 113/253 (44%), Gaps = 40/253 (15%)
Query: 23 ISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLV--LKSCSAIHRSQLGAAI 80
+SW +N ++ G ++A+ F ++ P ++ V +++ + + ++G ++
Sbjct: 570 VSWNIMMNGYLLHGQAEEAVATFRQMKVE---KFQPNAVTFVNIVRAAAELSALRVGMSV 626
Query: 81 HSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCV 140
HS I+ GF S V +LVDMY KC S+ K F EI + +V WN M+S Y
Sbjct: 627 HSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAY------ 680
Query: 141 SDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLR 200
A H GLA A++ + M+E LKP+ ++ L++L
Sbjct: 681 --------AAH-------------GLASC------AVSLFLSMQENELKPDSVSFLSVLS 713
Query: 201 ACVRMTSLNMIKEI-HGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVV 259
AC + K I R+ I+ + + +V+ G+ G A + M+ + V
Sbjct: 714 ACRHAGLVEEGKRIFEEMGERHKIEAEVEHYACMVDLLGKAGLFGEAVEMMRRMRVKTSV 773
Query: 260 A-WSSLISAYALH 271
W +L+++ +H
Sbjct: 774 GVWGALLNSSRMH 786
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 79/199 (39%), Gaps = 32/199 (16%)
Query: 112 ARKLFDEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTED 171
+R +FD + VV+WN+MI YT + +AL F M
Sbjct: 52 SRVIFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMS-------------------- 91
Query: 172 GSAKAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRS 231
E + P+ + L+AC IH ++ + +
Sbjct: 92 ------------EEKGIDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYIGT 139
Query: 232 GLVEAYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLP 291
LVE Y + L++A VF M +DVV W++++S A +G + +AL FH M V
Sbjct: 140 ALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDI 199
Query: 292 DDITFLAVLKACSHAGLAD 310
D ++ ++ A S +D
Sbjct: 200 DHVSLYNLIPAVSKLEKSD 218
>AT5G47460.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:19252463-19254193 REVERSE
Length = 576
Score = 170 bits (431), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 115/449 (25%), Positives = 215/449 (47%), Gaps = 37/449 (8%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
+ISW ++ +V+ G Q+ + +F + S + + + L +C+ +H S LGA IH
Sbjct: 121 VISWNSLVSGYVQSGRFQEGICLFLELHRSDVFP-NEFSFTAALAACARLHLSPLGACIH 179
Query: 82 SHSIKMGF-LSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCV 140
S +K+G N V L+DMYGKC A +F + +++ V WNA+++ + + +
Sbjct: 180 SKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKL 239
Query: 141 SDALYMF-------------------------DAMHV-----APDASTFNAIIAGLAGTE 170
L+ F +A V P++S++N I+ G +E
Sbjct: 240 ELGLWFFHQMPNPDTVTYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSE 299
Query: 171 DGSAKAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLR 230
S +A F+ +M ++ + +L +L A + + IH C+ + +D +
Sbjct: 300 K-SGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVA 358
Query: 231 SGLVEAYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVL 290
S L++ Y +CG L +A +F+ M ++++ W+ +IS YA +G++ A++ F+ ++ + L
Sbjct: 359 SALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQERFL 418
Query: 291 -PDDITFLAVLKACSHAGLADDA-LDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEA 348
PD TFL +L CSH + + L YF M +Y ++PS +H L+ + + G +++A
Sbjct: 419 KPDRFTFLNLLAVCSHCEVPMEVMLGYFEMMINEYRIKPSVEHCCSLIRAMGQRGEVWQA 478
Query: 349 YDIIRGMPVKVTVKAWGALLGACRTYGEVELAEIAGRALFEIEPDNPAN--YVLLARIYA 406
+I+ AW ALLGAC +++ A+ + E+ + Y++++ +YA
Sbjct: 479 KQVIQEFGFGYDGVAWRALLGACSARKDLKAAKTVAAKMIELGDADKDEYLYIVMSNLYA 538
Query: 407 SMGRHGEAXXXXXXXXXXGVKVAPGGSWV 435
R E GV G SW+
Sbjct: 539 YHERWREVGQIRKIMRESGVLKEVGSSWI 567
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 126/279 (45%), Gaps = 47/279 (16%)
Query: 80 IHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNC 139
+H + K GF+SN ++ +L+ Y S A K+FDE+P +V+ WN+++S Y S
Sbjct: 77 LHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGR 136
Query: 140 VSDALYMFDAMH---VAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLL 196
+ + +F +H V P+ +F A +A A L L P
Sbjct: 137 FQEGICLFLELHRSDVFPNEFSFTAALAACA-----------------RLHLSP------ 173
Query: 197 ALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKER 256
L AC+ + + E + N L++ YG+CG + +A VF +M+E+
Sbjct: 174 --LGACIHSKLVKLGLEKGNVVVGN----------CLIDMYGKCGFMDDAVLVFQHMEEK 221
Query: 257 DVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYF 316
D V+W++++++ + +G+ L FH M PD +T+ ++ A +G ++A
Sbjct: 222 DTVSWNAIVASCSRNGKLELGLWFFHQMPN----PDTVTYNELIDAFVKSGDFNNAFQVL 277
Query: 317 ARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGM 355
+ M P+S ++ ++ + + EA + M
Sbjct: 278 SDMP-----NPNSSSWNTILTGYVNSEKSGEATEFFTKM 311
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 99/193 (51%), Gaps = 3/193 (1%)
Query: 189 KPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASN 248
KP+ L+ LLR +++ +++HG ++ + +L + L+ Y L +A
Sbjct: 52 KPDASPLVHLLRVSGNYGYVSLCRQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHK 111
Query: 249 VFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGL 308
VF M + DV++W+SL+S Y G + + F + + V P++ +F A L AC+ L
Sbjct: 112 VFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHL 171
Query: 309 ADDALDYFARMQQDYGLQPSSDHY-SCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGAL 367
+ +++ + GL+ + +CL+D+ + G + +A + + M K TV +W A+
Sbjct: 172 SPLGACIHSKLVK-LGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTV-SWNAI 229
Query: 368 LGACRTYGEVELA 380
+ +C G++EL
Sbjct: 230 VASCSRNGKLELG 242
>AT4G22760.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:11958477-11962870 FORWARD
Length = 889
Score = 170 bits (430), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 126/396 (31%), Positives = 204/396 (51%), Gaps = 18/396 (4%)
Query: 23 ISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIHS 82
+SW L+ +++ G +A VF+ I A+S + L++ S + + +G A
Sbjct: 440 VSWNSLLHGYLESGELDEARRVFDKIPEKDAVSWN-----LIISSYAK--KGDMGNACSL 492
Query: 83 HSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSD 142
S L +P L+ Y C AR FD +PQ+N V W MIS YT V
Sbjct: 493 FSAMP--LKSPASWNILIGGYVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQS 550
Query: 143 ALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAK-AIAFYWRMRELS--LKPNLITLLALL 199
A +F M D ++A+IA T++G K A+ + +M E + ++P+ ITL +++
Sbjct: 551 AEELFRLMS-KKDKLVYDAMIACY--TQNGKPKDALKLFAQMLERNSYIQPDEITLSSVV 607
Query: 200 RACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVV 259
A ++ + + + + I L + L++ Y + G A +F N+ ++D V
Sbjct: 608 SANSQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTV 667
Query: 260 AWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARM 319
++S++I ++G A A F M K+ P+ +TF +L A SH+GL + F M
Sbjct: 668 SYSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSM 727
Query: 320 QQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVEL 379
+ D+ L+PS+DHY +VD+L RAGRL EAY++I+ MP++ WGALL A + VE
Sbjct: 728 K-DHNLEPSADHYGIMVDMLGRAGRLEEAYELIKSMPMQPNAGVWGALLLASGLHNNVEF 786
Query: 380 AEIAGRALFEIEPDNPANYVL-LARIYASMGRHGEA 414
EIA ++E D P Y+ LA IY+S+GR +A
Sbjct: 787 GEIACSHCVKLETD-PTGYLSHLAMIYSSVGRWDDA 821
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 84/359 (23%), Positives = 160/359 (44%), Gaps = 25/359 (6%)
Query: 59 YVLSLVLKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDE 118
+ ++ VL++C + G IH+ ++K G +V LV +Y + A+K FD+
Sbjct: 374 HAVTSVLRACGKMENMVDGKPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDD 433
Query: 119 IPQRNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIA 178
I ++N V WN+++ Y S + +A +FD + DA ++N II+ A D A +
Sbjct: 434 IAEKNTVSWNSLLHGYLESGELDEARRVFDKI-PEKDAVSWNLIISSYAKKGD-MGNACS 491
Query: 179 FYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSG-----L 233
+ M L + L+ C M R + D PQ ++G +
Sbjct: 492 LFSAM-PLKSPASWNILIGGYVNCREMK-----------LARTYFDAMPQ-KNGVSWITM 538
Query: 234 VEAYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHM--EMAKVLP 291
+ Y + G + +A +F M ++D + + ++I+ Y +G+ + AL+ F M + + P
Sbjct: 539 ISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQP 598
Query: 292 DDITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDI 351
D+IT +V+ A S G + ++G++ + L+D+ + G +A+ +
Sbjct: 599 DEITLSSVVSANSQLGNTSFGT-WVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKM 657
Query: 352 IRGMPVKVTVKAWGALLGACRTYGEVELAEIAGRALFEIE-PDNPANYVLLARIYASMG 409
+ K TV ++ A++ C G A A+ E + P N + L Y+ G
Sbjct: 658 FSNLNKKDTV-SYSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSG 715
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 93/207 (44%), Gaps = 10/207 (4%)
Query: 175 KAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLV 234
+ + Y M + P+ + ++LRAC +M ++ K IH +++N + +++GLV
Sbjct: 356 ETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPIHAQALKNGLCGCVYVQTGLV 415
Query: 235 EAYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDI 294
Y R G + A F ++ E++ V+W+SL+ Y GE A F + D +
Sbjct: 416 GLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEARRVFDKIPEK----DAV 471
Query: 295 TFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRG 354
++ ++ + + G +A F+ M P+S ++ L+ + A
Sbjct: 472 SWNLIISSYAKKGDMGNACSLFSAMPLK---SPAS--WNILIGGYVNCREMKLARTYFDA 526
Query: 355 MPVKVTVKAWGALLGACRTYGEVELAE 381
MP K V +W ++ G+V+ AE
Sbjct: 527 MPQKNGV-SWITMISGYTKLGDVQSAE 552
>AT1G16480.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: shoot apex;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT4G13650.1). | chr1:5625843-5628656
REVERSE
Length = 937
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 103/418 (24%), Positives = 190/418 (45%), Gaps = 41/418 (9%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSC----SAIHRSQLG 77
+++W + + + +AL F ++ +S + + VL +C + R G
Sbjct: 428 VVAWNALIGGYAEDEDPDKALAAFQTMRVE-GVSSNYITVVSVLSACLLPGDLLER---G 483
Query: 78 AAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHS 137
+H++ + GF S+ V +L+ MY KC S++ LF+ + RN++ WNAM++ H
Sbjct: 484 KPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHH 543
Query: 138 NCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLA 197
+ L + +MR + + +
Sbjct: 544 GHGEEVLKLVS---------------------------------KMRSFGVSLDQFSFSE 570
Query: 198 LLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERD 257
L A ++ L +++HG +++ + + + + Y +CG + + R
Sbjct: 571 GLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRS 630
Query: 258 VVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFA 317
+ +W+ LISA HG TFH M + P +TF+++L ACSH GL D L Y+
Sbjct: 631 LPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYD 690
Query: 318 RMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEV 377
+ +D+GL+P+ +H C++D+L R+GRL EA I MP+K W +LL +C+ +G +
Sbjct: 691 MIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNL 750
Query: 378 ELAEIAGRALFEIEPDNPANYVLLARIYASMGRHGEAXXXXXXXXXXGVKVAPGGSWV 435
+ A L ++EP++ + YVL + ++A+ GR + +K SWV
Sbjct: 751 DRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWV 808
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/360 (23%), Positives = 154/360 (42%), Gaps = 41/360 (11%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
LISW + S V G AL + + +S S++ + L +C + G +H
Sbjct: 327 LISWNSLMASFVNDGRSLDALGLLCSMISS-GKSVNYVTFTSALAACFTPDFFEKGRILH 385
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVS 141
+ G N + ALV MYGK +R++ ++P+R+VV WNA+I
Sbjct: 386 GLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALI---------- 435
Query: 142 DALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRA 201
G A ED KA+A + MR + N IT++++L A
Sbjct: 436 ----------------------GGYAEDED-PDKALAAFQTMRVEGVSSNYITVVSVLSA 472
Query: 202 CVRMTSL-NMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVA 260
C+ L K +H + + +++ L+ Y +CG L ++ ++F + R+++
Sbjct: 473 CLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIIT 532
Query: 261 WSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQ 320
W+++++A A HG L+ M V D +F L A + + ++ +
Sbjct: 533 WNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHG-LA 591
Query: 321 QDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMP--VKVTVKAWGALLGACRTYGEVE 378
G + S ++ D+ S+ G + E +++ +P V ++ +W L+ A +G E
Sbjct: 592 VKLGFEHDSFIFNAAADMYSKCGEIGE---VVKMLPPSVNRSLPSWNILISALGRHGYFE 648
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 81/359 (22%), Positives = 150/359 (41%), Gaps = 41/359 (11%)
Query: 23 ISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIHS 82
ISW ++ + G +++ +F+ + ++ +S +L + + G IH
Sbjct: 227 ISWNSIAAAYAQNGHIEESFRIFS-LMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHG 285
Query: 83 HSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSD 142
+KMGF S V L+ MY + A +F ++P ++++ WN++++ + + D
Sbjct: 286 LVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLD 345
Query: 143 ALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRAC 202
AL GL + S K++ N +T + L AC
Sbjct: 346 AL--------------------GLLCSMISSGKSV-------------NYVTFTSALAAC 372
Query: 203 VRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWS 262
+ +HG + + + + + + LV YG+ G + + V M RDVVAW+
Sbjct: 373 FTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWN 432
Query: 263 SLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQ- 321
+LI YA + AL F M + V + IT ++VL AC L D L+ +
Sbjct: 433 ALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACL---LPGDLLERGKPLHAY 489
Query: 322 --DYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVE 378
G + + L+ + ++ G L + D+ G+ + + W A+L A +G E
Sbjct: 490 IVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNR-NIITWNAMLAANAHHGHGE 547
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 76/355 (21%), Positives = 155/355 (43%), Gaps = 49/355 (13%)
Query: 23 ISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCS---AIHRSQLGAA 79
+SW ++ V+ G + + + F + L + +V++ ++ +C ++ R G
Sbjct: 24 VSWNTMMSGIVRVGLYLEGMEFFRKM-CDLGIKPSSFVIASLVTACGRSGSMFRE--GVQ 80
Query: 80 IHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNC 139
+H K G LS+ +V+ A++ +YG +RK+F+E+P RNVV W +++ Y+
Sbjct: 81 VHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKG- 139
Query: 140 VSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALL 199
P+ + I Y MR + N ++ ++
Sbjct: 140 -------------EPE-------------------EVIDIYKGMRGEGVGCNENSMSLVI 167
Query: 200 RACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVV 259
+C + ++ ++I G +++ ++ + + L+ G G + A+ +F M ERD +
Sbjct: 168 SSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTI 227
Query: 260 AWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARM 319
+W+S+ +AYA +G E+F + + D++ V S G D + R
Sbjct: 228 SWNSIAAAYAQNGHIE---ESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDH--QKWGRG 282
Query: 320 QQDYGLQPSSDHYSCLVDVLSR----AGRLYEAYDIIRGMPVKVTVKAWGALLGA 370
++ D C+ + L R AGR EA + + MP K + +W +L+ +
Sbjct: 283 IHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLI-SWNSLMAS 336
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 81/393 (20%), Positives = 164/393 (41%), Gaps = 52/393 (13%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
++SWT + + +G ++ + ++ ++ + + +SLV+ SC + LG I
Sbjct: 125 VVSWTSLMVGYSDKGEPEEVIDIYKGMRGE-GVGCNENSMSLVISSCGLLKDESLGRQII 183
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVS 141
+K G S V +L+ M G + A +FD++ +R+ + WN++ + Y + +
Sbjct: 184 GQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIE 243
Query: 142 DALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRA 201
++ +F MR + N T+ LL
Sbjct: 244 ESFRIFSL---------------------------------MRRFHDEVNSTTVSTLLSV 270
Query: 202 CVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAW 261
+ + IHG ++ D + + L+ Y G + A+ VF M +D+++W
Sbjct: 271 LGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISW 330
Query: 262 SSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQ 321
+SL++++ G + AL M + + +TF + L AC D+F + +
Sbjct: 331 NSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTP-------DFFEKGRI 383
Query: 322 DYGLQPSSDHY------SCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYG 375
+GL S + + LV + + G + E+ ++ MP + V AW AL+G Y
Sbjct: 384 LHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVV-AWNALIGG---YA 439
Query: 376 EVELAEIAGRALFEIEPDN-PANYVLLARIYAS 407
E E + A A + + +NY+ + + ++
Sbjct: 440 EDEDPDKALAAFQTMRVEGVSSNYITVVSVLSA 472
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 121/281 (43%), Gaps = 42/281 (14%)
Query: 102 MYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNA 161
MY K AR LFD +P RN V WN M+S V LY+
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMS-----GIVRVGLYL--------------- 40
Query: 162 IIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKE---IHGCS 218
+ + F+ +M +L +KP+ + +L+ AC R S +M +E +HG
Sbjct: 41 -------------EGMEFFRKMCDLGIKPSSFVIASLVTACGR--SGSMFREGVQVHGFV 85
Query: 219 IRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSAL 278
++ + + + ++ YG G + + VF M +R+VV+W+SL+ Y+ GE +
Sbjct: 86 AKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVI 145
Query: 279 ETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQ-QDYGLQPSSDHYSCLVD 337
+ + M V ++ + V+ +C L D++L Q GL+ + L+
Sbjct: 146 DIYKGMRGEGVGCNENSMSLVISSCGL--LKDESLGRQIIGQVVKSGLESKLAVENSLIS 203
Query: 338 VLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVE 378
+L G + A I M + T+ +W ++ A G +E
Sbjct: 204 MLGSMGNVDYANYIFDQMSERDTI-SWNSIAAAYAQNGHIE 243
>AT3G18840.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:6496198-6498940 FORWARD
Length = 698
Score = 169 bits (427), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 112/420 (26%), Positives = 189/420 (45%), Gaps = 65/420 (15%)
Query: 23 ISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIHS 82
ISW + + + G+ ++AL + ++ + L D + VL S++ ++G +H+
Sbjct: 226 ISWNTLIAGYAQNGYEEEALKMAVSMEEN-GLKWDEHSFGAVLNVLSSLKSLKIGKEVHA 284
Query: 83 HSIKMGFLSNPFVACALVDMYGKCVST-------------------------------FS 111
+K G SN FV+ +VD+Y KC +
Sbjct: 285 RVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVE 344
Query: 112 ARKLFDEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTED 171
A++LFD + ++N+VVW AM Y + L + A +A + +T
Sbjct: 345 AKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAF-IANETNT------------- 390
Query: 172 GSAKAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRS 231
P+ + ++++L AC + KEIHG S+R I +L +
Sbjct: 391 ------------------PDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVT 432
Query: 232 GLVEAYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLP 291
V+ Y +CG + A +F + ERD V ++++I+ A HG + + F M P
Sbjct: 433 AFVDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKP 492
Query: 292 DDITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDI 351
D+ITF+A+L AC H GL + YF M + Y + P + HY+C++D+ +A RL +A ++
Sbjct: 493 DEITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRLDKAIEL 552
Query: 352 IRGM-PVKVTVKAWGALLGACRTYGEVELAEIAGRALFEIEPDNPANYVLLARIYASMGR 410
+ G+ V+ GA L AC EL + L IE N + Y+ +A YAS R
Sbjct: 553 MEGIDQVEKDAVILGAFLNACSWNKNTELVKEVEEKLLVIEGSNGSRYIQIANAYASSAR 612
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 129/265 (48%), Gaps = 9/265 (3%)
Query: 81 HSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCV 140
H SIK G + LV++Y K AR +FDE+ +RNV WNA+I+ Y N V
Sbjct: 11 HIRSIKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVKFNNV 70
Query: 141 SDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLI---TLLA 197
+A +F++ + D T+N +++G A T+ ++AI + M I T+
Sbjct: 71 KEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTT 130
Query: 198 LLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYN--MKE 255
+++ ++T++ +++HG ++ D S L+ Y +CG N+F ++
Sbjct: 131 MVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEF 190
Query: 256 RDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDY 315
D VA +++I+AY G+ AL F L D I++ ++ + G ++AL
Sbjct: 191 VDSVARNAMIAAYCREGDIDKALSVFWR---NPELNDTISWNTLIAGYAQNGYEEEALKM 247
Query: 316 FARMQQDYGLQPSSDHYSCLVDVLS 340
M+++ GL+ + +++VLS
Sbjct: 248 AVSMEEN-GLKWDEHSFGAVLNVLS 271
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 89/409 (21%), Positives = 167/409 (40%), Gaps = 45/409 (11%)
Query: 7 LNQLRIMSYSSNYLR-LISWTKQLNSHVK-QGFHQQALVVFN--HIQTSLALSLDPYVLS 62
+ + R + S N R LI++ L+ K G +A+ +F H + + +D + ++
Sbjct: 70 VKEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVT 129
Query: 63 LVLKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDE--IP 120
++K + + G +H +K G F +L+ MY KC +F+ +
Sbjct: 130 TMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVE 189
Query: 121 QRNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLA--GTEDGSAKAIA 178
+ V NAMI+ Y + AL +F D ++N +IAG A G E+ +A+
Sbjct: 190 FVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEE---EALK 246
Query: 179 FYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYG 238
M E LK + + A+L + SL + KE+H ++N + + SG+V+ Y
Sbjct: 247 MAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYC 306
Query: 239 RCGC-------------------------------LINASNVFYNMKERDVVAWSSLISA 267
+CG ++ A +F ++ E+++V W+++
Sbjct: 307 KCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLG 366
Query: 268 YALHGEARSALETFHHMEMAKV-LPDDITFLAVLKACSHAGLADDALDYFARMQQDYGLQ 326
Y + S LE + PD + ++VL ACS + + + G+
Sbjct: 367 YLNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRT-GIL 425
Query: 327 PSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYG 375
+ VD+ S+ G + A I + TV + A++ C +G
Sbjct: 426 MDKKLVTAFVDMYSKCGNVEYAERIFDSSFERDTV-MYNAMIAGCAHHG 473
>AT3G51320.1 | Symbols: | INVOLVED IN: biological_process unknown;
EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 6
growth stages; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: binding
(TAIR:AT3G62890.1); Has 12158 Blast hits to 4373
proteins in 95 species: Archae - 0; Bacteria - 0;
Metazoa - 23; Fungi - 18; Plants - 12009; Viruses - 0;
Other Eukaryotes - 108 (source: NCBI BLink). |
chr3:19049853-19051445 REVERSE
Length = 530
Score = 166 bits (419), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 107/356 (30%), Positives = 176/356 (49%), Gaps = 13/356 (3%)
Query: 60 VLSLVLKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEI 119
++S + K+C G H +IK G V +L+ MY C + A+KLF EI
Sbjct: 124 LISCIEKTCCV----DSGKMCHGQAIKHGCDQVLPVQNSLMHMYTCCGALDLAKKLFVEI 179
Query: 120 PQRNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDAS--TFNAIIAGLAGTEDGSAKAI 177
P+R++V WN++I+ + V A +FD M PD + ++N +I+ G + +I
Sbjct: 180 PKRDIVSWNSIIAGMVRNGDVLAAHKLFDEM---PDKNIISWNIMISAYLGANNPGV-SI 235
Query: 178 AFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAY 237
+ + M + N TL+ LL AC R L + +H IR ++ + + L++ Y
Sbjct: 236 SLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTFLNSSVVIDTALIDMY 295
Query: 238 GRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFL 297
G+C + A +F ++ R+ V W+ +I A+ LHG LE F M + PD++TF+
Sbjct: 296 GKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLELFEAMINGMLRPDEVTFV 355
Query: 298 AVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMP- 356
VL C+ AGL Y++ M ++ ++P+ H C+ ++ S AG EA + ++ +P
Sbjct: 356 GVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCMANLYSSAGFPEEAEEALKNLPD 415
Query: 357 --VKVTVKAWGALLGACRTYGEVELAEIAGRALFEIEPDNPANYVLLARIYASMGR 410
V W LL + R G L E ++L E +P N Y LL IY+ GR
Sbjct: 416 EDVTPESTKWANLLSSSRFTGNPTLGESIAKSLIETDPLNYKYYHLLMNIYSVTGR 471
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 86/177 (48%), Gaps = 5/177 (2%)
Query: 175 KAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLV 234
+A+ FY+ + P+ T ++L+ + ++ K HG +I++ D +++ L+
Sbjct: 101 QALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHGCDQVLPVQNSLM 160
Query: 235 EAYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDI 294
Y CG L A +F + +RD+V+W+S+I+ +G+ +A + F M ++ +I
Sbjct: 161 HMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNI 220
Query: 295 TFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDI 351
A L A ++ G+ ++ F M + G Q + L++ R+ RL E +
Sbjct: 221 MISAYLGA-NNPGV---SISLFREMVR-AGFQGNESTLVLLLNACGRSARLKEGRSV 272
>AT1G43980.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:16685832-16689502 REVERSE
Length = 633
Score = 165 bits (417), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 109/419 (26%), Positives = 192/419 (45%), Gaps = 42/419 (10%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
++SW + S G + AL F + + + D Y +S+V+ CS + G
Sbjct: 200 VVSWNCLILSCSDSGNKEVALDQF-WLMREMEIQPDEYTVSMVVSICSDLRELSKGKQAL 258
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVS 141
+ IKMGFLSN V A +DM+ KC + KLF E+ + + V+ N+MI Y+ C
Sbjct: 259 ALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCCGE 318
Query: 142 DALYMFD---AMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLAL 198
DAL +F V PD TF+++++ +
Sbjct: 319 DALRLFILAMTQSVRPDKFTFSSVLSSMNAV----------------------------- 349
Query: 199 LRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDV 258
L+ ++H I+ D + + L+E Y + G + A VF +D+
Sbjct: 350 --------MLDHGADVHSLVIKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDL 401
Query: 259 VAWSSLISAYALHGEARSALETFHHMEMAKVL-PDDITFLAVLKACSHAGLADDALDYFA 317
+ W+++I A + A +L F+ + M + L PD +T + +L AC +AG ++ + F+
Sbjct: 402 IFWNTVIMGLARNSRAVESLAIFNQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFS 461
Query: 318 RMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEV 377
M++ +G+ P ++HY+C++++L R G + EA DI +P + + W +L A G+
Sbjct: 462 SMEKAHGVNPGNEHYACIIELLCRVGMINEAKDIADKIPFEPSSHIWEPILCASLDLGDT 521
Query: 378 ELAEIAGRALFEIEPDNPANYVLLARIYASMGRHGEAXXXXXXXXXXGVKVAPGGSWVT 436
LAE + + E EP + Y++L +IY R + +K A G S ++
Sbjct: 522 RLAETVAKTMLESEPKSSFPYLVLIKIYEMTWRWENSVKLRYAMNEHKLKSAQGSSKIS 580
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 135/284 (47%), Gaps = 17/284 (5%)
Query: 76 LGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYT 135
L +H+ ++ GF+ + + +Y K S +A +LFD+IP +N + WN +
Sbjct: 22 LAKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDIPDKNTITWNVCLKGLF 81
Query: 136 HSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLIT- 194
+ +++AL +FD M D ++N +I+GL I ++ M+ ++P T
Sbjct: 82 KNGYLNNALDLFDEMP-ERDVVSWNTMISGLVSC-GFHEYGIRVFFDMQRWEIRPTEFTF 139
Query: 195 -LLALLRACVRMTSLNMIKEIHGCSIRNHIDPHP-QLRSGLVEAYGRCGCLINASNVFYN 252
+LA L CVR ++IHG +I + + + + + +++ Y R G A +VF
Sbjct: 140 SILASLVTCVRHG-----EQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLT 194
Query: 253 MKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACS---HAGLA 309
M++RDVV+W+ LI + + G AL+ F M ++ PD+ T V+ CS
Sbjct: 195 MEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKG 254
Query: 310 DDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIR 353
AL +M G +S +D+ S+ RL ++ + R
Sbjct: 255 KQALALCIKM----GFLSNSIVLGAGIDMFSKCNRLDDSVKLFR 294
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 125/291 (42%), Gaps = 27/291 (9%)
Query: 23 ISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIHS 82
I+W L K G+ AL +F+ + +S + + LV SC H
Sbjct: 71 ITWNVCLKGLFKNGYLNNALDLFDEMPERDVVSWNTMISGLV--SC----------GFHE 118
Query: 83 HSIKMGF-------LSNPFVACALVDMYGKCV---STFSARKLFDEIPQRNVVVWNAMIS 132
+ I++ F F L + CV + + + N+VVWN+++
Sbjct: 119 YGIRVFFDMQRWEIRPTEFTFSILASLV-TCVRHGEQIHGNAICSGVSRYNLVVWNSVMD 177
Query: 133 LYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAK-AIAFYWRMRELSLKPN 191
+Y AL +F M D ++N +I L+ ++ G+ + A+ +W MRE+ ++P+
Sbjct: 178 MYRRLGVFDYALSVFLTME-DRDVVSWNCLI--LSCSDSGNKEVALDQFWLMREMEIQPD 234
Query: 192 LITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFY 251
T+ ++ C + L+ K+ I+ + + ++ + +C L ++ +F
Sbjct: 235 EYTVSMVVSICSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFR 294
Query: 252 NMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKA 302
+++ D V +S+I +Y+ H AL F V PD TF +VL +
Sbjct: 295 ELEKWDSVLCNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSS 345
>AT1G64310.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23866053-23867711 FORWARD
Length = 552
Score = 164 bits (416), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 105/402 (26%), Positives = 195/402 (48%), Gaps = 39/402 (9%)
Query: 36 GFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAA--IHSHSIKMGFLSNP 93
GF + + +FN +Q P ++V + I S L A +H+ +K+ S+
Sbjct: 186 GFWDKGINLFNLMQHR---GHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHS 242
Query: 94 FVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMHVA 153
+V CALV+MY +C+ SA +F+ I + ++V +++I+ Y+ +AL++F + ++
Sbjct: 243 YVGCALVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMS 302
Query: 154 PDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKE 213
KP+ + + +L +C ++ KE
Sbjct: 303 GK---------------------------------KPDCVLVAIVLGSCAELSDSVSGKE 329
Query: 214 IHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGE 273
+H IR ++ ++ S L++ Y +CG L A ++F + E+++V+++SLI LHG
Sbjct: 330 VHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILGLGLHGF 389
Query: 274 ARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYS 333
A +A E F + ++PD+ITF A+L C H+GL + + F RM+ ++G++P ++HY
Sbjct: 390 ASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEIFERMKSEFGIEPQTEHYV 449
Query: 334 CLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVELAEIAGRALFEIEPD 393
+V ++ AG+L EA++ + + + GALL C + LAE+ + + +
Sbjct: 450 YMVKLMGMAGKLEEAFEFVMSLQKPIDSGILGALLSCCEVHENTHLAEVVAENIHKNGEE 509
Query: 394 NPANY-VLLARIYASMGRHGEAXXXXXXXXXXGVKVAPGGSW 434
+ Y V+L+ +YA GR E PG SW
Sbjct: 510 RRSVYKVMLSNVYARYGRWDEVERLRDGISESYGGKLPGISW 551
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 144/350 (41%), Gaps = 45/350 (12%)
Query: 25 WTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIHSHS 84
W + ++ K L +F+ I S D + + + + S ++ IH +
Sbjct: 74 WNSIIRAYAKAHQFTTVLSLFSQILRS-DTRPDNFTYACLARGFSESFDTKGLRCIHGIA 132
Query: 85 IKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSDAL 144
I G + A+V Y K A KLF IP ++ +WN MI Y
Sbjct: 133 IVSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGY---------- 182
Query: 145 YMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRACVR 204
G G D K I + M+ +PN T++AL +
Sbjct: 183 --------------------GCCGFWD---KGINLFNLMQHRGHQPNCYTMVALTSGLID 219
Query: 205 MTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWSSL 264
+ L + +H ++ ++D H + LV Y RC C+ +A +VF ++ E D+VA SSL
Sbjct: 220 PSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSVFNSISEPDLVACSSL 279
Query: 265 ISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLAD-----DALDYFARM 319
I+ Y+ G + AL F + M+ PD + VL +C A L+D + Y R+
Sbjct: 280 ITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSC--AELSDSVSGKEVHSYVIRL 337
Query: 320 QQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLG 369
GL+ S L+D+ S+ G L A + G+P K V +LG
Sbjct: 338 ----GLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILG 383
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 110/269 (40%), Gaps = 48/269 (17%)
Query: 80 IHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNC 139
+HS K +P+ A L Y SARKLFD P+R+V +WN++I Y ++
Sbjct: 27 LHSFVTKSKLARDPYFATQLARFYALNDDLISARKLFDVFPERSVFLWNSIIRAYAKAHQ 86
Query: 140 VSDALYMFDAM---HVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLL 196
+ L +F + PD T+ + G + + D
Sbjct: 87 FTTVLSLFSQILRSDTRPDNFTYACLARGFSESFDTKG---------------------- 124
Query: 197 ALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKER 256
++ IHG +I + + S +V+AY + G ++ AS +F ++ +
Sbjct: 125 --------------LRCIHGIAIVSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSIPDP 170
Query: 257 DVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYF 316
D+ W+ +I Y G + F+ M+ P+ T +A+ +GL D +L
Sbjct: 171 DLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQPNCYTMVALT-----SGLIDPSLLLV 225
Query: 317 ARMQQDYGLQPSSDHYS----CLVDVLSR 341
A + L+ + D +S LV++ SR
Sbjct: 226 AWSVHAFCLKINLDSHSYVGCALVNMYSR 254
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 79/145 (54%), Gaps = 4/145 (2%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
L++ + + + + G H++AL +F ++ S D ++++VL SC+ + S G +H
Sbjct: 273 LVACSSLITGYSRCGNHKEALHLFAELRMS-GKKPDCVLVAIVLGSCAELSDSVSGKEVH 331
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMI---SLYTHSN 138
S+ I++G + V AL+DMY KC A LF IP++N+V +N++I L+ ++
Sbjct: 332 SYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFAS 391
Query: 139 CVSDALYMFDAMHVAPDASTFNAII 163
+ M + PD TF+A++
Sbjct: 392 TAFEKFTEILEMGLIPDEITFSALL 416
>AT5G52850.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:21414935-21417616 REVERSE
Length = 893
Score = 162 bits (410), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 117/395 (29%), Positives = 185/395 (46%), Gaps = 46/395 (11%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSL--VLKSCSAIHRSQLGAA 79
++SWT + V GF Q F + + ++P V++L VL++CS + +
Sbjct: 392 VVSWTTLILGLVDHGFVQDC---FGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLE 448
Query: 80 IHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNC 139
IH++ ++ V +LVD Y S+RK+ WN + S+ N
Sbjct: 449 IHAYLLRRHVDGEMVVGNSLVDAYA------SSRKV--------DYAWNVIRSMKRRDNI 494
Query: 140 VSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYW----RMRELSLKPNLITL 195
+L + FN + G + + I + + RM +LSL P I+
Sbjct: 495 TYTSL-----------VTRFNEL-----GKHEMALSVINYMYGDGIRMDQLSL-PGFIS- 536
Query: 196 LALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKE 255
A + +L K +H S+++ + + LV+ Y +CG L +A VF +
Sbjct: 537 -----ASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIAT 591
Query: 256 RDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDY 315
DVV+W+ L+S A +G SAL F M M + PD +TFL +L ACS+ L D L+Y
Sbjct: 592 PDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEY 651
Query: 316 FARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYG 375
F M++ Y ++P +HY LV +L RAGRL EA ++ M +K + LL ACR G
Sbjct: 652 FQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKTLLRACRYRG 711
Query: 376 EVELAEIAGRALFEIEPDNPANYVLLARIYASMGR 410
+ L E + P +PA Y+LLA +Y G+
Sbjct: 712 NLSLGEDMANKGLALAPSDPALYILLADLYDESGK 746
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 95/381 (24%), Positives = 165/381 (43%), Gaps = 39/381 (10%)
Query: 25 WTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIHSHS 84
WT ++ V+ ++A+ F ++ SL L + + S +L CSA+ G IHS +
Sbjct: 293 WTSVVSGFVRNLRAKEAVGTFLEMR-SLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQT 351
Query: 85 IKMGFLSNPFVACALVDMYGKC-VSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSDA 143
IK+GF + V ALVDMY KC S A ++F + NVV W +I V D
Sbjct: 352 IKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDC 411
Query: 144 LYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRACV 203
M + ++PN++TL +LRAC
Sbjct: 412 F---------------------------------GLLMEMVKREVEPNVVTLSGVLRACS 438
Query: 204 RMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWSS 263
++ + + EIH +R H+D + + LV+AY + A NV +MK RD + ++S
Sbjct: 439 KLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTS 498
Query: 264 LISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQDY 323
L++ + G+ AL ++M + D ++ + A ++ G A + +
Sbjct: 499 LVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLG-ALETGKHLHCYSVKS 557
Query: 324 GLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVE--LAE 381
G ++ + LVD+ S+ G L +A + + V +W L+ + G + L+
Sbjct: 558 GFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVV-SWNGLVSGLASNGFISSALSA 616
Query: 382 IAGRALFEIEPDNPANYVLLA 402
+ E EPD+ +LL+
Sbjct: 617 FEEMRMKETEPDSVTFLILLS 637
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/380 (24%), Positives = 157/380 (41%), Gaps = 50/380 (13%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
+ +WT +++ K AL +F + S + + S V++SC+ + G +H
Sbjct: 89 VFAWTVMISAFTKSQEFASALSLFEEMMAS-GTHPNEFTFSSVVRSCAGLRDISYGGRVH 147
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVS 141
IK GF N V +L D+Y KC A +LF + + + W MIS
Sbjct: 148 GSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMIS--------- 198
Query: 142 DALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRA 201
L G +A+ FY M + + PN T + LL A
Sbjct: 199 -----------------------SLVGARKWR-EALQFYSEMVKAGVPPNEFTFVKLLGA 234
Query: 202 CVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAW 261
L K IH I I + L++ LV+ Y + + +A V + E+DV W
Sbjct: 235 S-SFLGLEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLW 293
Query: 262 SSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQ 321
+S++S + + A+ A+ TF M + P++ T+ A+L CS A +LD+ ++
Sbjct: 294 TSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCS----AVRSLDFGKQIHS 349
Query: 322 D---YGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVE 378
G + S+D + LVD+ + + G V V +W L+ +G V+
Sbjct: 350 QTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQ 409
Query: 379 -----LAEIAGRALFEIEPD 393
L E+ R E+EP+
Sbjct: 410 DCFGLLMEMVKR---EVEPN 426
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 114/245 (46%), Gaps = 34/245 (13%)
Query: 64 VLKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRN 123
+L C + + S++G IH IK G L N + L+ +Y K ++ARKLFDE+ R
Sbjct: 30 ILSFCES-NSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRT 88
Query: 124 VVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRM 183
V W MIS +T S + AL +F+ M + GT
Sbjct: 89 VFAWTVMISAFTKSQEFASALSLFEEMMAS--------------GTH------------- 121
Query: 184 RELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCL 243
PN T +++R+C + ++ +HG I+ + + + S L + Y +CG
Sbjct: 122 ------PNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQF 175
Query: 244 INASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKAC 303
A +F +++ D ++W+ +IS+ + R AL+ + M A V P++ TF+ +L A
Sbjct: 176 KEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGAS 235
Query: 304 SHAGL 308
S GL
Sbjct: 236 SFLGL 240
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 111/253 (43%), Gaps = 51/253 (20%)
Query: 8 NQLRIMSYSSNYLRLISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKS 67
N +R M N I++T + + G H+ AL V N++ + +D L + +
Sbjct: 483 NVIRSMKRRDN----ITYTSLVTRFNELGKHEMALSVINYMYGD-GIRMDQLSLPGFISA 537
Query: 68 CSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVW 127
+ + + G +H +S+K GF V +LVDMY KC S A+K+F+EI +VV W
Sbjct: 538 SANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSW 597
Query: 128 NAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELS 187
N ++S + +S AL F+ M RM+E
Sbjct: 598 NGLVSGLASNGFISSALSAFEEM-------------------------------RMKE-- 624
Query: 188 LKPNLITLLALLRACV--RMTSLNM-----IKEIHGCSIRNHIDPHPQLRSGLVEAYGRC 240
+P+ +T L LL AC R+T L + +K+I+ +I+P + LV GR
Sbjct: 625 TEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIY------NIEPQVEHYVHLVGILGRA 678
Query: 241 GCLINASNVFYNM 253
G L A+ V M
Sbjct: 679 GRLEEATGVVETM 691
>AT3G50420.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:18710871-18713649 REVERSE
Length = 794
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 106/415 (25%), Positives = 187/415 (45%), Gaps = 35/415 (8%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
L+SW ++ + GF +QA++++ + D Y S + + + R G +H
Sbjct: 366 LVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLH 425
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVS 141
K+G+ + FV L+ MY K SA+K+FD + +R+VV+W MI HS +
Sbjct: 426 GQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMI--VGHSRLGN 483
Query: 142 DALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRA 201
L A+ F+ M + + +L +++ A
Sbjct: 484 SEL-------------------------------AVQFFIEMYREKNRSDGFSLSSVIGA 512
Query: 202 CVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAW 261
C M L + H +IR D + LV+ YG+ G A +F D+ W
Sbjct: 513 CSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASNPDLKCW 572
Query: 262 SSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQ 321
+S++ AY+ HG AL F + +PD +T+L++L ACSH G + +M++
Sbjct: 573 NSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQMKE 632
Query: 322 DYGLQPSSDHYSCLVDVLSRAGRLYEAYDII-RGMPVKVTVKAWGALLGACRTYGEVELA 380
G++ HYSC+V+++S+AG + EA ++I + P + W LL AC +++
Sbjct: 633 Q-GIKAGFKHYSCMVNLVSKAGLVDEALELIEQSPPGNNQAELWRTLLSACVNTRNLQIG 691
Query: 381 EIAGRALFEIEPDNPANYVLLARIYASMGRHGEAXXXXXXXXXXGVKVAPGGSWV 435
A + +++P++ A ++LL+ +YA GR + PG SW+
Sbjct: 692 LYAAEQILKLDPEDTATHILLSNLYAVNGRWEDVAEMRRKIRGLASSKDPGLSWI 746
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 90/373 (24%), Positives = 150/373 (40%), Gaps = 44/373 (11%)
Query: 37 FHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVA 96
F + N I +S+ V VLK IH L A + + +P+
Sbjct: 82 FQMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAAT------ESPYAN 135
Query: 97 CALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDA 156
L+ MY +C S ARK+FD++P RNVV +NA+ S Y+ + PD
Sbjct: 136 NNLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRN----------------PDF 179
Query: 157 STFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHG 216
+++ A M +KPN T +L++ C + + M ++
Sbjct: 180 ASY----------------AFPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDVLMGSSLNS 223
Query: 217 CSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARS 276
I+ + +++ ++ Y CG L +A +F + RD VAW+++I + +
Sbjct: 224 QIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIED 283
Query: 277 ALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQDYGLQ--PSSDHYSC 334
L F +M M+ V P T+ VL CS G AR+ L P +
Sbjct: 284 GLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDN---A 340
Query: 335 LVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVELAEIAGRALFEIEPDN 394
L+D+ G + EA+ + G + +W +++ C G E A + R L +
Sbjct: 341 LLDMYCSCGDMREAFYVF-GRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPR 399
Query: 395 PANYVLLARIYAS 407
P Y A I A+
Sbjct: 400 PDEYTFSAAISAT 412
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 88/362 (24%), Positives = 153/362 (42%), Gaps = 43/362 (11%)
Query: 23 ISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDP--YVLSLVLKSCSAIHRSQLGAAI 80
++W + +K + L+ F ++ S +DP + S+VL CS + LG I
Sbjct: 266 VAWNTMIVGSLKNDKIEDGLMFFRNMLMS---GVDPTQFTYSIVLNGCSKLGSYSLGKLI 322
Query: 81 HSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCV 140
H+ I L++ + AL+DMY C +
Sbjct: 323 HARIIVSDSLADLPLDNALLDMYCSCGD-------------------------------M 351
Query: 141 SDALYMFDAMHVAPDASTFNAIIAGLAGTEDG-SAKAIAFYWRMRELSL-KPNLITLLAL 198
+A Y+F +H P+ ++N+II+G +E+G +A+ Y R+ +S +P+ T A
Sbjct: 352 REAFYVFGRIH-NPNLVSWNSIISGC--SENGFGEQAMLMYRRLLRMSTPRPDEYTFSAA 408
Query: 199 LRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDV 258
+ A K +HG + + + + L+ Y + +A VF MKERDV
Sbjct: 409 ISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDV 468
Query: 259 VAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFAR 318
V W+ +I ++ G + A++ F M K D + +V+ ACS + + F
Sbjct: 469 VLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQG-EVFHC 527
Query: 319 MQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVE 378
+ G LVD+ + G+ YE + I + +K W ++LGA +G VE
Sbjct: 528 LAIRTGFDCVMSVCGALVDMYGKNGK-YETAETIFSLASNPDLKCWNSMLGAYSQHGMVE 586
Query: 379 LA 380
A
Sbjct: 587 KA 588
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 104/216 (48%), Gaps = 31/216 (14%)
Query: 93 PFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMHV 152
P+ L+ MY +C S ARK+FD++PQRN+V + +++ +V
Sbjct: 22 PYANNNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFE---------------YV 66
Query: 153 APDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIK 212
+ +S + II + GS + I F+ + E++ +++ L R CV +T L +
Sbjct: 67 SMGSSLHSQII------KLGSFQMI-FFMPLNEIA-----SSVVELTRKCVSITVLKRAR 114
Query: 213 EIHGCSIR---NHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWSSLISAYA 269
+IH + P + L+ Y RCG L A VF M R+VV++++L SAY+
Sbjct: 115 QIHALVLTAGAGAATESPYANNNLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYS 174
Query: 270 LHGE-ARSALETFHHMEMAKVLPDDITFLAVLKACS 304
+ + A A HM V P+ TF ++++ C+
Sbjct: 175 RNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCA 210
>AT3G58590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:21666262-21668487 FORWARD
Length = 741
Score = 159 bits (402), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 92/320 (28%), Positives = 155/320 (48%), Gaps = 9/320 (2%)
Query: 59 YVLSLVLKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDE 118
Y S LKSC QL HS ++MG+ N +V +L+ Y K A L D
Sbjct: 417 YTFSTALKSCCVTELQQL----HSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDW 472
Query: 119 IP-QRNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAI 177
+VV N + +Y+ +++ + + PD ++N IA + + D + I
Sbjct: 473 ASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLE-QPDTVSWNIAIAACSRS-DYHEEVI 530
Query: 178 AFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSG-LVEA 236
+ M + +++P+ T +++L C ++ L + IHG + L++
Sbjct: 531 ELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDM 590
Query: 237 YGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITF 296
YG+CG + + VF +E++++ W++LIS +HG + ALE F PD ++F
Sbjct: 591 YGKCGSIRSVMKVFEETREKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSF 650
Query: 297 LAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMP 356
+++L AC H G+ + + F +M +DYG++P DHY C VD+L+R G L EA +IR MP
Sbjct: 651 ISILTACRHGGMVKEGMGLFQKM-KDYGVEPEMDHYRCAVDLLARNGYLKEAEHLIREMP 709
Query: 357 VKVTVKAWGALLGACRTYGE 376
W L C + E
Sbjct: 710 FPADAPVWRTFLDGCNRFAE 729
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 120/282 (42%), Gaps = 35/282 (12%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
L +W ++ +GF ++ + F + + SL VLK S + + +H
Sbjct: 180 LETWNHMMSLLGHRGFLKECMFFFREL-VRMGASLTESSFLGVLKGVSCVKDLDISKQLH 238
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVS 141
+ K G V +L+ YGKC +T A ++F + ++V WNA
Sbjct: 239 CSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNA------------ 286
Query: 142 DALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRA 201
II A +E+ KA+ + M E PN T +++L
Sbjct: 287 --------------------IICATAKSEN-PLKALKLFVSMPEHGFSPNQGTYVSVLGV 325
Query: 202 CVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAW 261
+ L+ ++IHG I+N + L + L++ Y +CG L ++ F ++++++V W
Sbjct: 326 SSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCW 385
Query: 262 SSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKAC 303
++L+S YA + + L F M P + TF LK+C
Sbjct: 386 NALLSGYA-NKDGPICLSLFLQMLQMGFRPTEYTFSTALKSC 426
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 77/355 (21%), Positives = 153/355 (43%), Gaps = 51/355 (14%)
Query: 23 ISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIHS 82
+S+ + + K G +A VF+ ++ L V L+ SC+++ + G +H
Sbjct: 81 VSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLL--SCASLD-VRAGTQLHG 137
Query: 83 HSIKMG-FLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVS 141
S+K G F+++ FV L+ +YG+ A ++F+++P +++ WN M+SL H +
Sbjct: 138 LSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLK 197
Query: 142 DALYMFDA---MHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLAL 198
+ ++ F M + S+F ++ G++ +D
Sbjct: 198 ECMFFFRELVRMGASLTESSFLGVLKGVSCVKD--------------------------- 230
Query: 199 LRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDV 258
L++ K++H + + +D + + L+ AYG+CG A +F + D+
Sbjct: 231 ---------LDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDI 281
Query: 259 VAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFAR 318
V+W+++I A A AL+ F M P+ T+++VL S L
Sbjct: 282 VSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGM 341
Query: 319 MQQDYGLQPSSDHYSCLVDVLSRAGRLYEA---YDIIRGMPVKVTVKAWGALLGA 370
+ ++ G + + L+D ++ G L ++ +D IR + W ALL
Sbjct: 342 LIKN-GCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDK----NIVCWNALLSG 391
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 87/175 (49%), Gaps = 8/175 (4%)
Query: 23 ISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIHS 82
+SW + + + +H++ + +F H+ S + D Y +L CS + LG++IH
Sbjct: 511 VSWNIAIAACSRSDYHEEVIELFKHMLQS-NIRPDKYTFVSILSLCSKLCDLTLGSSIHG 569
Query: 83 HSIKMGF-LSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVS 141
K F ++ FV L+DMYGKC S S K+F+E ++N++ W A+IS
Sbjct: 570 LITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLITWTALISCLGIHGYGQ 629
Query: 142 DALYMFD---AMHVAPDASTFNAIIAGLAGTEDGSAK-AIAFYWRMRELSLKPNL 192
+AL F ++ PD +F +I+ A G K + + +M++ ++P +
Sbjct: 630 EALEKFKETLSLGFKPDRVSFISILT--ACRHGGMVKEGMGLFQKMKDYGVEPEM 682
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 142/344 (41%), Gaps = 33/344 (9%)
Query: 64 VLKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRN 123
VL S + G IH IK G + + AL+D Y KC + +R FD I +N
Sbjct: 322 VLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKN 381
Query: 124 VVVWNAMISLYTHSN---CVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFY 180
+V WNA++S Y + + C+S L M M P TF+ + TE ++
Sbjct: 382 IVCWNALLSGYANKDGPICLSLFLQMLQ-MGFRPTEYTFSTALKSCCVTELQQLHSV--- 437
Query: 181 WRMRELSLKPNLITLLALLRACVRMTSLN-MIKEIHGCSIRNHIDPHPQLRSGLVEAYGR 239
+ + + N L +L+R+ + +N + + S + P + +G+ Y R
Sbjct: 438 --IVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVP-LNIVAGI---YSR 491
Query: 240 CGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAV 299
G + + +++ D V+W+ I+A + +E F HM + + PD TF+++
Sbjct: 492 RGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSI 551
Query: 300 LKACSHAGLADDALDYFARMQQDYGLQPSSDHYSC--------LVDVLSRAGRLYEAYDI 351
L CS L D L +GL +D +SC L+D+ + G + +
Sbjct: 552 LSLCSK--LCDLTLG-----SSIHGLITKTD-FSCADTFVCNVLIDMYGKCGSIRSVMKV 603
Query: 352 IRGMPVKVTVKAWGALLG--ACRTYGEVELAEIAGRALFEIEPD 393
K + W AL+ YG+ L + +PD
Sbjct: 604 FEETREKNLI-TWTALISCLGIHGYGQEALEKFKETLSLGFKPD 646
>AT1G14470.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:4954080-4955702 FORWARD
Length = 540
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 106/321 (33%), Positives = 171/321 (53%), Gaps = 20/321 (6%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCS-----AIHRSQL 76
++SW L+ + + GF + AL +FN + L + + +V+ +CS ++ RS L
Sbjct: 229 VVSWNAMLSGYAQNGFTEDALRLFNDM-LRLGVRPNETTWVIVISACSFRADPSLTRS-L 286
Query: 77 GAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEI-PQRNVVVWNAMISLYT 135
I +++ N FV AL+DM+ KC SAR++F+E+ QRN+V WNAMIS YT
Sbjct: 287 VKLIDEKRVRL----NCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYT 342
Query: 136 HSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMREL-SLKPNLIT 194
+S A +FD M + ++N++IAG A +A AI F+ M + KP+ +T
Sbjct: 343 RIGDMSSARQLFDTMP-KRNVVSWNSLIAGYAHNGQ-AALAIEFFEDMIDYGDSKPDEVT 400
Query: 195 LLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMK 254
++++L AC M L + I +N I + L+ Y R G L A VF MK
Sbjct: 401 MISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMK 460
Query: 255 ERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALD 314
ERDVV++++L +A+A +G+ L M+ + PD +T+ +VL AC+ AGL +
Sbjct: 461 ERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQR 520
Query: 315 YFARMQQDYGLQPSSDHYSCL 335
F ++ P +DHY+C+
Sbjct: 521 IFKSIR-----NPLADHYACM 536
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 108/405 (26%), Positives = 177/405 (43%), Gaps = 79/405 (19%)
Query: 57 DPYVLSLVLKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLF 116
D + +V+KS + G + K+GF +P+V ++DMY K S SARK+F
Sbjct: 105 DAFSFPVVIKSAG-----RFGILFQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVF 159
Query: 117 DEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTED----- 171
D+I QR WN MIS Y +A +FD M D ++ +I G A +D
Sbjct: 160 DQISQRKGSDWNVMISGYWKWGNKEEACKLFDMMP-ENDVVSWTVMITGFAKVKDLENAR 218
Query: 172 -------------------GSAK------AIAFYWRMRELSLKPNLITLLALLRAC---- 202
G A+ A+ + M L ++PN T + ++ AC
Sbjct: 219 KYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRA 278
Query: 203 ---VRMTSLNMIKEIH---GCSIRNH-IDPHPQLR---------------------SGLV 234
+ + + +I E C ++ +D H + R + ++
Sbjct: 279 DPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMI 338
Query: 235 EAYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHM-EMAKVLPDD 293
Y R G + +A +F M +R+VV+W+SLI+ YA +G+A A+E F M + PD+
Sbjct: 339 SGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDE 398
Query: 294 ITFLAVLKACSHAG---LADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYD 350
+T ++VL AC H L D +DY + Q ++ + Y L+ + +R G L+EA
Sbjct: 399 VTMISVLSACGHMADLELGDCIVDYIRKNQ----IKLNDSGYRSLIFMYARGGNLWEAKR 454
Query: 351 IIRGMPVKVTVKAWGALLGACRTYGE-VELAEIAGRALFE-IEPD 393
+ M + V ++ L A G+ VE + + E IEPD
Sbjct: 455 VFDEMKERDVV-SYNTLFTAFAANGDGVETLNLLSKMKDEGIEPD 498
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/340 (20%), Positives = 140/340 (41%), Gaps = 51/340 (15%)
Query: 109 TFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMH---VAPDASTFNAII-- 163
++ R +FD + NV V N+M ++ + +D L +++ + PDA +F +I
Sbjct: 56 SYYTRLIFDSVTFPNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKS 115
Query: 164 AGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEI--------- 214
AG G I F + +L + ++ V+ S+ +++
Sbjct: 116 AGRFG--------ILFQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKG 167
Query: 215 -----------------HGCSIRNHIDPHPQLRSG--LVEAYGRCGCLINASNVFYNMKE 255
C + + + P + S ++ + + L NA F M E
Sbjct: 168 SDWNVMISGYWKWGNKEEACKLFDMM-PENDVVSWTVMITGFAKVKDLENARKYFDRMPE 226
Query: 256 RDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDY 315
+ VV+W++++S YA +G AL F+ M V P++ T++ V+ ACS AD +L
Sbjct: 227 KSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFR--ADPSLTR 284
Query: 316 -FARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTY 374
++ + ++ + + L+D+ ++ + A I + + + W A++
Sbjct: 285 SLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRI 344
Query: 375 GEVELAEIAGRALFEIEPDNPANYVLLARIYASMGRHGEA 414
G++ + R LF+ P N V + A +G+A
Sbjct: 345 GDMS----SARQLFDTMPKR--NVVSWNSLIAGYAHNGQA 378
>AT2G36730.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15405068-15406573 REVERSE
Length = 501
Score = 155 bits (392), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 111/376 (29%), Positives = 174/376 (46%), Gaps = 41/376 (10%)
Query: 63 LVLKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQR 122
+LK+C++ G I +K GF + +V L+ +YG C T
Sbjct: 118 FLLKACASFLGLTAGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKT------------- 164
Query: 123 NVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAI-AFYW 181
SDA +FD M + ++N+I+ L E+G + +
Sbjct: 165 ------------------SDARKVFDEM-TERNVVSWNSIMTAL--VENGKLNLVFECFC 203
Query: 182 RMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCG 241
M P+ T++ LL AC +L++ K +H + ++ + +L + LV+ Y + G
Sbjct: 204 EMIGKRFCPDETTMVVLLSAC--GGNLSLGKLVHSQVMVRELELNCRLGTALVDMYAKSG 261
Query: 242 CLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHM-EMAKVLPDDITFLAVL 300
L A VF M +++V WS++I A +G A AL+ F M + + V P+ +TFL VL
Sbjct: 262 GLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVL 321
Query: 301 KACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVT 360
ACSH GL DD YF M++ + ++P HY +VD+L RAGRL EAYD I+ MP +
Sbjct: 322 CACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFEPD 381
Query: 361 VKAWGALLGACRTYGEVE---LAEIAGRALFEIEPDNPANYVLLARIYASMGRHGEAXXX 417
W LL AC + + + + E + L E+EP N V++A +A EA
Sbjct: 382 AVVWRTLLSACSIHHDEDDEGIGEKVKKRLIELEPKRSGNLVIVANRFAEARMWAEAAEV 441
Query: 418 XXXXXXXGVKVAPGGS 433
+K G S
Sbjct: 442 RRVMKETKMKKIAGES 457
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 108/224 (48%), Gaps = 5/224 (2%)
Query: 157 STFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHG 216
ST+N + G + + D ++I Y M+ +KPN +T LL+AC L ++I
Sbjct: 79 STWNMLSRGYSSS-DSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQV 137
Query: 217 CSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARS 276
+++ D + + L+ YG C +A VF M ER+VV+W+S+++A +G+
Sbjct: 138 EVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNL 197
Query: 277 ALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLV 336
E F M + PD+ T + +L AC L+ L + M ++ L+ + + LV
Sbjct: 198 VFECFCEMIGKRFCPDETTMVVLLSACG-GNLSLGKLVHSQVMVRE--LELNCRLGTALV 254
Query: 337 DVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVELA 380
D+ +++G L A + M V V W A++ YG E A
Sbjct: 255 DMYAKSGGLEYARLVFERM-VDKNVWTWSAMIVGLAQYGFAEEA 297
>AT1G71460.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:26928247-26930316 REVERSE
Length = 689
Score = 152 bits (383), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 95/338 (28%), Positives = 158/338 (46%), Gaps = 34/338 (10%)
Query: 11 RIMSYSSNYLRLISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSA 70
R + Y S ISWT ++ + G QAL +Q D ++ VL C+
Sbjct: 372 RRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQE-GFRPDVVTIATVLPVCAE 430
Query: 71 IHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAM 130
+ + G IH +++K FL N + +L+ MY KC +LFD + QRNV W AM
Sbjct: 431 LRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAM 490
Query: 131 ISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKP 190
I Y + + + +F M ++ +P
Sbjct: 491 IDCYVENCDLRAGIEVFRLMLLSKH---------------------------------RP 517
Query: 191 NLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVF 250
+ +T+ +L C + +L + KE+HG ++ + P + + +++ YG+CG L +A+ F
Sbjct: 518 DSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDLRSANFSF 577
Query: 251 YNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLAD 310
+ + + W+++I AY + R A+ F M P+ TF AVL CS AG D
Sbjct: 578 DAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGFVD 637
Query: 311 DALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEA 348
+A +F M + Y LQPS +HYS ++++L+R GR+ EA
Sbjct: 638 EAYRFFNLMLRMYNLQPSEEHYSLVIELLNRCGRVEEA 675
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 142/296 (47%), Gaps = 41/296 (13%)
Query: 14 SYSSNYLRLISWTKQLNSHVKQG--FHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAI 71
S SSN + SW L V G +Q L F ++ L + L+ Y LS V KS +
Sbjct: 172 STSSN---VYSWNALLRGTVISGKKRYQDVLSTFTEMR-ELGVDLNVYSLSNVFKSFAGA 227
Query: 72 HRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMI 131
+ G H+ +IK G ++ F+ +LVDMY KC AR++FDEI +R++VVW AMI
Sbjct: 228 SALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMI 287
Query: 132 SLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPN 191
+ H+ +AL +F M + E + PN
Sbjct: 288 AGLAHNKRQWEALGLFRTM--------------------------------ISEEKIYPN 315
Query: 192 LITLLALLRACVRMTSLNMIKEIHGCSIR--NHIDPHPQLRSGLVEAYGRCGCLINASNV 249
+ L +L + +L + KE+H ++ N+++ P + SGL++ Y +CG + + V
Sbjct: 316 SVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVE-QPFVHSGLIDLYCKCGDMASGRRV 374
Query: 250 FYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSH 305
FY K+R+ ++W++L+S YA +G AL + M+ PD +T VL C+
Sbjct: 375 FYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAE 430
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 84/353 (23%), Positives = 152/353 (43%), Gaps = 44/353 (12%)
Query: 34 KQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQL--GAAIHSHSIKMGFLS 91
+Q + AL + ++++ + ++ S +L++C + R L G +H H G S
Sbjct: 88 RQNNLEVALTILDYLEQR-GIPVNATTFSALLEAC--VRRKSLLHGKQVHVHIRINGLES 144
Query: 92 NPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMH 151
N F+ LV MY C S A+K+FDE NV WNA++
Sbjct: 145 NEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLR------------------- 185
Query: 152 VAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMI 211
+I+G +D ++ + MREL + N+ +L + ++ ++L
Sbjct: 186 --------GTVISGKKRYQD----VLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQG 233
Query: 212 KEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWSSLISAYALH 271
+ H +I+N + L++ LV+ Y +CG + A VF + ERD+V W ++I+ A +
Sbjct: 234 LKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHN 293
Query: 272 GEARSALETFHHM-EMAKVLPDDI---TFLAVLKACSHAGLADDALDYFARMQQDYGLQP 327
AL F M K+ P+ + T L VL L + + + ++Y QP
Sbjct: 294 KRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLK-SKNYVEQP 352
Query: 328 SSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVELA 380
+S L+D+ + G + + G + + +W AL+ G + A
Sbjct: 353 FV--HSGLIDLYCKCGDMASGRRVFYGSKQRNAI-SWTALMSGYAANGRFDQA 402
>AT1G22830.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:8076921-8079032 FORWARD
Length = 703
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 102/308 (33%), Positives = 162/308 (52%), Gaps = 8/308 (2%)
Query: 126 VWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRE 185
V N++I++Y+ + + A +F + A ST+N+II+G A E ++ +F +
Sbjct: 359 VRNSLITMYSRCSDLRHAFIVFQQVE-ANSLSTWNSIISGFAYNE--RSEETSFLLKEML 415
Query: 186 LS-LKPNLITLLALLRACVRMTSLNMIKEIHGCSI--RNHIDPHPQLRSGLVEAYGRCGC 242
LS PN ITL ++L R+ +L KE H C I R L + LV+ Y + G
Sbjct: 416 LSGFHPNHITLASILPLFARVGNLQHGKEFH-CYILRRQSYKDCLILWNSLVDMYAKSGE 474
Query: 243 LINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKA 302
+I A VF +M++RD V ++SLI Y G+ AL F M+ + + PD +T +AVL A
Sbjct: 475 IIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSA 534
Query: 303 CSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVK 362
CSH+ L + F +M+ +G++ +HYSC+VD+ RAG L +A DI +P + +
Sbjct: 535 CSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSA 594
Query: 363 AWGALLGACRTYGEVELAE-IAGRALFEIEPDNPANYVLLARIYASMGRHGEAXXXXXXX 421
LL AC +G + E A + L E +P++ +Y+LLA +YA G +
Sbjct: 595 MCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWSKLVTVKTLL 654
Query: 422 XXXGVKVA 429
GV+ A
Sbjct: 655 SDLGVQKA 662
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/399 (23%), Positives = 178/399 (44%), Gaps = 18/399 (4%)
Query: 7 LNQLRIMSYSSNYLRLISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLK 66
L++ + ++ +S L + W + S+++ Q+++ V+ + S + D + V+K
Sbjct: 134 LDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMM-SKGIRADEFTYPSVIK 192
Query: 67 SCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVV 126
+C+A+ G +H N +V AL+ MY + AR+LFD + +R+ V
Sbjct: 193 ACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVS 252
Query: 127 WNAMISLYTHSNCVSDALYMFDAMH---VAPDASTFNAIIAGL--AGTEDGSAKAIAFYW 181
WNA+I+ YT + +A + D M+ V T+N I G AG G+ +
Sbjct: 253 WNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVV--- 309
Query: 182 RMRELSLKPNLITLLALLRACVRMTSLNMIKEIH-----GCSIRNHIDPHPQLRSGLVEA 236
MR +++ + ++ L+AC + +L K H CS + ID +R+ L+
Sbjct: 310 GMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDID---NVRNSLITM 366
Query: 237 YGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITF 296
Y RC L +A VF ++ + W+S+IS +A + + M ++ P+ IT
Sbjct: 367 YSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITL 426
Query: 297 LAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMP 356
++L + G ++ + + + ++ LVD+ +++G + A + M
Sbjct: 427 ASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMR 486
Query: 357 VKVTVKAWGALLGACRT-YGEVELAEIAGRALFEIEPDN 394
+ V + G R GEV LA I+PD+
Sbjct: 487 KRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDH 525
>AT1G22830.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:8076921-8079032 FORWARD
Length = 703
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 102/308 (33%), Positives = 162/308 (52%), Gaps = 8/308 (2%)
Query: 126 VWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRE 185
V N++I++Y+ + + A +F + A ST+N+II+G A E ++ +F +
Sbjct: 359 VRNSLITMYSRCSDLRHAFIVFQQVE-ANSLSTWNSIISGFAYNE--RSEETSFLLKEML 415
Query: 186 LS-LKPNLITLLALLRACVRMTSLNMIKEIHGCSI--RNHIDPHPQLRSGLVEAYGRCGC 242
LS PN ITL ++L R+ +L KE H C I R L + LV+ Y + G
Sbjct: 416 LSGFHPNHITLASILPLFARVGNLQHGKEFH-CYILRRQSYKDCLILWNSLVDMYAKSGE 474
Query: 243 LINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKA 302
+I A VF +M++RD V ++SLI Y G+ AL F M+ + + PD +T +AVL A
Sbjct: 475 IIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSA 534
Query: 303 CSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVK 362
CSH+ L + F +M+ +G++ +HYSC+VD+ RAG L +A DI +P + +
Sbjct: 535 CSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSA 594
Query: 363 AWGALLGACRTYGEVELAE-IAGRALFEIEPDNPANYVLLARIYASMGRHGEAXXXXXXX 421
LL AC +G + E A + L E +P++ +Y+LLA +YA G +
Sbjct: 595 MCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWSKLVTVKTLL 654
Query: 422 XXXGVKVA 429
GV+ A
Sbjct: 655 SDLGVQKA 662
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/399 (23%), Positives = 178/399 (44%), Gaps = 18/399 (4%)
Query: 7 LNQLRIMSYSSNYLRLISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLK 66
L++ + ++ +S L + W + S+++ Q+++ V+ + S + D + V+K
Sbjct: 134 LDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMM-SKGIRADEFTYPSVIK 192
Query: 67 SCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVV 126
+C+A+ G +H N +V AL+ MY + AR+LFD + +R+ V
Sbjct: 193 ACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVS 252
Query: 127 WNAMISLYTHSNCVSDALYMFDAMH---VAPDASTFNAIIAGL--AGTEDGSAKAIAFYW 181
WNA+I+ YT + +A + D M+ V T+N I G AG G+ +
Sbjct: 253 WNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVV--- 309
Query: 182 RMRELSLKPNLITLLALLRACVRMTSLNMIKEIH-----GCSIRNHIDPHPQLRSGLVEA 236
MR +++ + ++ L+AC + +L K H CS + ID +R+ L+
Sbjct: 310 GMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDID---NVRNSLITM 366
Query: 237 YGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITF 296
Y RC L +A VF ++ + W+S+IS +A + + M ++ P+ IT
Sbjct: 367 YSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITL 426
Query: 297 LAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMP 356
++L + G ++ + + + ++ LVD+ +++G + A + M
Sbjct: 427 ASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMR 486
Query: 357 VKVTVKAWGALLGACRT-YGEVELAEIAGRALFEIEPDN 394
+ V + G R GEV LA I+PD+
Sbjct: 487 KRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDH 525
>AT3G26540.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:9744542-9746644 REVERSE
Length = 700
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 94/366 (25%), Positives = 162/366 (44%), Gaps = 34/366 (9%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
++SW L +V +AL ++ + ++D L +L CS I Q+G H
Sbjct: 360 IVSWNAMLGGYVHAHEWDEALDFLTLMRQEIE-NIDNVTLVWILNVCSGISDVQMGKQAH 418
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVS 141
+ G+ NV+V NA++ +Y +
Sbjct: 419 GFIYRHGY-------------------------------DTNVIVANALLDMYGKCGTLQ 447
Query: 142 DALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRA 201
A F M D ++NA++ G+A S +A++F+ M ++ KP+ TL LL
Sbjct: 448 SANIWFRQMSELRDEVSWNALLTGVARV-GRSEQALSFFEGM-QVEAKPSKYTLATLLAG 505
Query: 202 CVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAW 261
C + +LN+ K IHG IR+ +R +V+ Y +C C A VF RD++ W
Sbjct: 506 CANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATRDLILW 565
Query: 262 SSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQ 321
+S+I +G ++ E F +E V PD +TFL +L+AC G + YF+ M
Sbjct: 566 NSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVTFLGILQACIREGHVELGFQYFSSMST 625
Query: 322 DYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVELAE 381
Y + P +HY C++++ + G L++ + + MP ++ + AC+ Y +L
Sbjct: 626 KYHISPQVEHYDCMIELYCKYGCLHQLEEFLLLMPFDPPMQMLTRINDACQRYRWSKLGA 685
Query: 382 IAGRAL 387
A + L
Sbjct: 686 WAAKRL 691
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 157/288 (54%), Gaps = 13/288 (4%)
Query: 23 ISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDP--YVLSLVLKSCSAIHRSQLGAAI 80
+SW + +++ GF+ +A+V+F + L L++ P + +S V+ +CS ++G I
Sbjct: 229 VSWNVIVRRYLEMGFNDEAVVMFFKM---LELNVRPLNHTVSSVMLACSRSLALEVGKVI 285
Query: 81 HSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCV 140
H+ ++K+ +++ V+ ++ DMY KC SAR++FD+ +++ W + +S Y S
Sbjct: 286 HAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLT 345
Query: 141 SDALYMFDAMHVAPDAS--TFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLAL 198
+A +FD M P+ + ++NA++ G + +A+ F MR+ + +TL+ +
Sbjct: 346 REARELFDLM---PERNIVSWNAMLGGYVHAHEWD-EALDFLTLMRQEIENIDNVTLVWI 401
Query: 199 LRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKE-RD 257
L C ++ + M K+ HG R+ D + + + L++ YG+CG L +A+ F M E RD
Sbjct: 402 LNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRD 461
Query: 258 VVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSH 305
V+W++L++ A G + AL F M++ + P T +L C++
Sbjct: 462 EVSWNALLTGVARVGRSEQALSFFEGMQV-EAKPSKYTLATLLAGCAN 508
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 134/299 (44%), Gaps = 38/299 (12%)
Query: 24 SWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIHSH 83
SW + + + G + +F + + + VLKSC I +L +H
Sbjct: 129 SWNAVITACAQNGVSDEVFRMFRRMNRD-GVRATETSFAGVLKSCGLILDLRLLRQLHCA 187
Query: 84 SIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSDA 143
+K G+ N + ++VD+YGKC AR++FDEI + V WN ++ Y +A
Sbjct: 188 VVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEA 247
Query: 144 LYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRACV 203
+ MF ++M EL+++P T+ +++ AC
Sbjct: 248 VVMF---------------------------------FKMLELNVRPLNHTVSSVMLACS 274
Query: 204 RMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWSS 263
R +L + K IH +++ + + + + + Y +C L +A VF + +D+ +W+S
Sbjct: 275 RSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTS 334
Query: 264 LISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQD 322
+S YA+ G R A E F M + +++ A+L HA D+ALD+ M+Q+
Sbjct: 335 AMSGYAMSGLTREARELFDLMPERNI----VSWNAMLGGYVHAHEWDEALDFLTLMRQE 389
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 41/70 (58%)
Query: 234 VEAYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDD 293
+EAYG+CGC+ +A +F M ERD +W+++I+A A +G + F M V +
Sbjct: 103 IEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATE 162
Query: 294 ITFLAVLKAC 303
+F VLK+C
Sbjct: 163 TSFAGVLKSC 172
>AT1G23450.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:8324698-8326697 FORWARD
Length = 666
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 101/390 (25%), Positives = 179/390 (45%), Gaps = 35/390 (8%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQT-SLALSLDPYVLSLVLKSCSAIHRSQLGAAI 80
+ISW ++ G +L +F+ +Q S+ P++ L CS Q G I
Sbjct: 280 VISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMS--FLNFCSRNSDIQSGKQI 337
Query: 81 HSHSIKMGF-LSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNC 139
H + +KMGF +S+ V AL+DMYGKC ++ L+ +P N+ N++++ H
Sbjct: 338 HCYVLKMGFDVSSLHVQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGI 397
Query: 140 VSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALL 199
D + MF GL E + ++ LSL +L L
Sbjct: 398 TKDIIEMF-----------------GLMIDEGTGIDEVTLSTVLKALSL-----SLPESL 435
Query: 200 RACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVV 259
+C +H C+I++ + L++AY + G + VF + ++
Sbjct: 436 HSCTL---------VHCCAIKSGYAADVAVSCSLIDAYTKSGQNEVSRKVFDELDTPNIF 486
Query: 260 AWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARM 319
+S+I+ YA +G ++ M+ ++PD++T L+VL CSH+GL ++ F +
Sbjct: 487 CLTSIINGYARNGMGTDCVKMLREMDRMNLIPDEVTILSVLSGCSHSGLVEEGELIFDSL 546
Query: 320 QQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVEL 379
+ YG+ P Y+C+VD+L RAG + +A ++ AW +LL +CR + +
Sbjct: 547 ESKYGISPGRKLYACMVDLLGRAGLVEKAERLLLQARGDADCVAWSSLLQSCRIHRNETI 606
Query: 380 AEIAGRALFEIEPDNPANYVLLARIYASMG 409
A L +EP+N A Y+ +++ Y +G
Sbjct: 607 GRRAAEVLMNLEPENFAVYIQVSKFYFEIG 636
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 110/243 (45%), Gaps = 35/243 (14%)
Query: 64 VLKSCSAIHRSQLGAAIHSHSIKMGF-LSNPFVACALVDMYGKCVSTFSARKLFDEIPQR 122
+++ CS G +HS +K G+ +SN FVA LVD Y C + + F+ +P++
Sbjct: 219 MIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEK 278
Query: 123 NVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWR 182
+V+ WN+++S+ V D+L +F M +W
Sbjct: 279 DVISWNSIVSVCADYGSVLDSLDLFSKMQ----------------------------FWG 310
Query: 183 MRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHP-QLRSGLVEAYGRCG 241
R P++ ++ L C R + + K+IH ++ D ++S L++ YG+C
Sbjct: 311 KR-----PSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCN 365
Query: 242 CLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLK 301
+ N++ ++ ++ ++ +SL+++ G + +E F M D++T VLK
Sbjct: 366 GIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDEVTLSTVLK 425
Query: 302 ACS 304
A S
Sbjct: 426 ALS 428
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 99/243 (40%), Gaps = 34/243 (13%)
Query: 64 VLKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRN 123
VL CS + G +H I +GF N FV ALV +Y A KLFDE+ RN
Sbjct: 118 VLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRN 177
Query: 124 VVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRM 183
+ V N ++ + + S + Y RM
Sbjct: 178 LAVCNLLLRCFCQTG---------------------------------ESKRLFEVYLRM 204
Query: 184 RELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHID-PHPQLRSGLVEAYGRCGC 242
+ N +T ++R C + K++H +++ + + + + LV+ Y CG
Sbjct: 205 ELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGD 264
Query: 243 LINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKA 302
L + F + E+DV++W+S++S A +G +L+ F M+ P F++ L
Sbjct: 265 LSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNF 324
Query: 303 CSH 305
CS
Sbjct: 325 CSR 327
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 121/292 (41%), Gaps = 25/292 (8%)
Query: 92 NPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMH 151
PF+A +D FS+ +E P V N I S + A FD M
Sbjct: 24 TPFIATPRMD--------FSS--FLEENPSDLVYTHNRRIDELIKSGNLLSAHEAFDEMS 73
Query: 152 VAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMI 211
V D T+N +I+G S +AI Y M L+ + T ++L C
Sbjct: 74 VR-DVVTYNLLISG-NSRYGCSLRAIELYAEMVSCGLRESASTFPSVLSVCSDELFCREG 131
Query: 212 KEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLIN-ASNVFYNMKERDVVAWSSLISAYAL 270
++H I + +RS LV Y C L++ A +F M +R++ + L+ +
Sbjct: 132 IQVHCRVISLGFGCNMFVRSALVGLYA-CLRLVDVALKLFDEMLDRNLAVCNLLLRCFCQ 190
Query: 271 HGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQDYGLQPS-- 328
GE++ E + ME+ V + +T+ +++ CSH D L Y + ++
Sbjct: 191 TGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSH-----DRLVYEGKQLHSLVVKSGWN 245
Query: 329 -SDHY--SCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEV 377
S+ + + LVD S G L + +P K V +W +++ C YG V
Sbjct: 246 ISNIFVANVLVDYYSACGDLSGSMRSFNAVPEK-DVISWNSIVSVCADYGSV 296
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | EMB175 (EMBRYO
DEFECTIVE 175); catalytic | chr5:1010894-1013584 REVERSE
Length = 896
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 104/416 (25%), Positives = 178/416 (42%), Gaps = 35/416 (8%)
Query: 23 ISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIHS 82
I++ + + G +AL +F + + L + L+ + +C + ++ IH
Sbjct: 383 ITYNALMAGFCRNGHGLKALKLFTDMLQR-GVELTDFSLTSAVDACGLVSEKKVSEQIHG 441
Query: 83 HSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSD 142
IK G NP + AL+DM +C +R ++D
Sbjct: 442 FCIKFGTAFNPCIQTALLDMCTRC--------------ER-----------------MAD 470
Query: 143 ALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWR-MRELSLKPNLITLLALLRA 201
A MFD D+S I G KA++ + R + E L + ++L +L
Sbjct: 471 AEEMFDQWPSNLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAV 530
Query: 202 CVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAW 261
C + M +IH +++ L + L+ Y +C +A +F M+E DV++W
Sbjct: 531 CGTLGFREMGYQIHCYALKAGYFSDISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISW 590
Query: 262 SSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKAC--SHAGLADDALDYFARM 319
+SLIS Y L AL + M ++ PD IT V+ A + + D F M
Sbjct: 591 NSLISCYILQRNGDEALALWSRMNEKEIKPDIITLTLVISAFRYTESNKLSSCRDLFLSM 650
Query: 320 QQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVEL 379
+ Y ++P+++HY+ V VL G L EA D I MPV+ V ALL +CR + +
Sbjct: 651 KTIYDIEPTTEHYTAFVRVLGHWGLLEEAEDTINSMPVQPEVSVLRALLDSCRIHSNTSV 710
Query: 380 AEIAGRALFEIEPDNPANYVLLARIYASMGRHGEAXXXXXXXXXXGVKVAPGGSWV 435
A+ + + +P+ P+ Y+L + IY++ G + G + P SW+
Sbjct: 711 AKRVAKLILSTKPETPSEYILKSNIYSASGFWHRSEMIREEMRERGYRKHPAKSWI 766
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 135/318 (42%), Gaps = 46/318 (14%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
++S+T ++ + +AL VF ++ + + + Y +L +C + R LG IH
Sbjct: 145 VVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGIQIH 204
Query: 82 SHSIKMGFLSNPFVACALVDMYGK--CVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNC 139
+K GFL++ FV+ +L+ +Y K S KLFDEIPQR+V WN ++S
Sbjct: 205 GLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWNTVVSSLV---- 260
Query: 140 VSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELS-LKPNLITLLAL 198
E S KA ++ M + + TL L
Sbjct: 261 -----------------------------KEGKSHKAFDLFYEMNRVEGFGVDSFTLSTL 291
Query: 199 LRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDV 258
L +C + L +E+HG +IR + + + L+ Y + + +++ M +D
Sbjct: 292 LSSCTDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDA 351
Query: 259 VAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFAR 318
V ++ +I+AY G SA+E F ++ + IT+ A++ G AL F
Sbjct: 352 VTFTEMITAYMSFGMVDSAVEIFANV----TEKNTITYNALMAGFCRNGHGLKALKLFTD 407
Query: 319 MQQ------DYGLQPSSD 330
M Q D+ L + D
Sbjct: 408 MLQRGVELTDFSLTSAVD 425
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 131/290 (45%), Gaps = 5/290 (1%)
Query: 24 SWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIHSH 83
SW ++S VK+G +A +F + +D + LS +L SC+ G +H
Sbjct: 251 SWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGR 310
Query: 84 SIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSDA 143
+I++G + V AL+ Y K L++ + ++ V + MI+ Y V A
Sbjct: 311 AIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSA 370
Query: 144 LYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRACV 203
+ +F A + T+NA++AG G KA+ + M + ++ +L + + AC
Sbjct: 371 VEIF-ANVTEKNTITYNALMAGFCRNGHG-LKALKLFTDMLQRGVELTDFSLTSAVDACG 428
Query: 204 RMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKER--DVVAW 261
++ + ++IHG I+ +P +++ L++ RC + +A +F A
Sbjct: 429 LVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWPSNLDSSKAT 488
Query: 262 SSLISAYALHGEARSALETFHH-MEMAKVLPDDITFLAVLKACSHAGLAD 310
+S+I YA +G A+ FH + K+ D+++ +L C G +
Sbjct: 489 TSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFRE 538
>AT4G18520.1 | Symbols: | INVOLVED IN: biological_process unknown;
EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 9
growth stages; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT4G39530.1); Has
16698 Blast hits to 4567 proteins in 114 species: Archae
- 0; Bacteria - 4; Metazoa - 97; Fungi - 32; Plants -
16266; Viruses - 0; Other Eukaryotes - 299 (source: NCBI
BLink). | chr4:10215250-10217103 REVERSE
Length = 617
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 94/359 (26%), Positives = 171/359 (47%), Gaps = 46/359 (12%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
+ISWT +++ ++G +A+ +F + L + + + +LK+CS + G +H
Sbjct: 249 VISWTAVISACSRKGHGIKAIGMFIGMLNHWFLP-NEFTVCSILKACSEEKALRFGRQVH 307
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVS 141
S +K ++ FV +L+DMY KC RK+FD + RN V W ++I+ +
Sbjct: 308 SLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAR----- 362
Query: 142 DALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRA 201
E +AI+ + M+ L N +T++++LRA
Sbjct: 363 ----------------------------EGFGEEAISLFRIMKRRHLIANNLTVVSILRA 394
Query: 202 CVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAW 261
C + +L + KE+H I+N I+ + + S LV Y +CG +A NV + RDVV+W
Sbjct: 395 CGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSW 454
Query: 262 SSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQ 321
+++IS + G AL+ M V P+ T+ + LKAC+++ + ++
Sbjct: 455 TAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKK 514
Query: 322 DYGLQPSSDHY--SCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALL------GACR 372
++ L S+ + S L+ + ++ G + EA+ + MP K V +W A++ G CR
Sbjct: 515 NHAL---SNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLV-SWKAMIMGYARNGFCR 569
Score = 121 bits (304), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 142/292 (48%), Gaps = 35/292 (11%)
Query: 23 ISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIHS 82
++WT + +H ++GF ++A+ +F ++ ++ + V+S +L++C ++ LG +H+
Sbjct: 351 VTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVS-ILRACGSVGALLLGKELHA 409
Query: 83 HSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSD 142
IK N ++ LV +Y KC + A + ++P R+VV W AMIS C S
Sbjct: 410 QIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMIS-----GCSS- 463
Query: 143 ALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRAC 202
G E ++A+ F M + ++PN T + L+AC
Sbjct: 464 ------------------------LGHE---SEALDFLKEMIQEGVEPNPFTYSSALKAC 496
Query: 203 VRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWS 262
SL + + IH + +NH + + S L+ Y +CG + A VF +M E+++V+W
Sbjct: 497 ANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWK 556
Query: 263 SLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALD 314
++I YA +G R AL+ + ME DD F +L C L D+A++
Sbjct: 557 AMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATILSTCGDIEL-DEAVE 607
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/379 (23%), Positives = 181/379 (47%), Gaps = 41/379 (10%)
Query: 23 ISWTKQLNSHVKQGFHQQALVVF-NHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
++WT ++ ++K G +A +F ++++ + + + + L L CS +LG +H
Sbjct: 149 VTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVCL-LNLCSRRAEFELGRQVH 207
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVS 141
+ +K+G + N V +LV Y +C SA + FD + +++V+ W A+IS +
Sbjct: 208 GNMVKVG-VGNLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGI 266
Query: 142 DALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRA 201
A+ MF M N +W + PN T+ ++L+A
Sbjct: 267 KAIGMFIGM--------LN-------------------HWFL------PNEFTVCSILKA 293
Query: 202 CVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAW 261
C +L +++H ++ I + + L++ Y +CG + + VF M R+ V W
Sbjct: 294 CSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTW 353
Query: 262 SSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQ 321
+S+I+A+A G A+ F M+ ++ +++T +++L+AC G + A++ +
Sbjct: 354 TSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIK 413
Query: 322 DYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYG-EVELA 380
+ ++ + S LV + + G +A+++++ +P + V +W A++ C + G E E
Sbjct: 414 N-SIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVV-SWTAMISGCSSLGHESEAL 471
Query: 381 EIAGRALFE-IEPDNPANY 398
+ + E +EP NP Y
Sbjct: 472 DFLKEMIQEGVEP-NPFTY 489
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 117/263 (44%), Gaps = 43/263 (16%)
Query: 112 ARKLFDEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTED 171
ARK+FD +P++N V W AMI Y +A +F ED
Sbjct: 136 ARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALF----------------------ED 173
Query: 172 GSAKAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRS 231
I F N + LL C R + +++HG ++ + + + S
Sbjct: 174 YVKHGIRF----------TNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGV-GNLIVES 222
Query: 232 GLVEAYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLP 291
LV Y +CG L +A F M+E+DV++W+++ISA + G A+ F M LP
Sbjct: 223 SLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLP 282
Query: 292 DDITFLAVLKACSHAGLADDALDYFARMQQDYGLQP--SSDHY--SCLVDVLSRAGRLYE 347
++ T ++LKACS + AL F R ++ +D + + L+D+ ++ G + +
Sbjct: 283 NEFTVCSILKACSE----EKALR-FGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISD 337
Query: 348 AYDIIRGMPVKVTVKAWGALLGA 370
+ GM + TV W +++ A
Sbjct: 338 CRKVFDGMSNRNTV-TWTSIIAA 359
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 72/152 (47%), Gaps = 4/152 (2%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
++SWT ++ G +AL + + +P+ S LK+C+ +G +IH
Sbjct: 451 VVSWTAMISGCSSLGHESEALDFLKEMIQE-GVEPNPFTYSSALKACANSESLLIGRSIH 509
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVS 141
S + K LSN FV AL+ MY KC A ++FD +P++N+V W AMI Y +
Sbjct: 510 SIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCR 569
Query: 142 DAL---YMFDAMHVAPDASTFNAIIAGLAGTE 170
+AL Y +A D F I++ E
Sbjct: 570 EALKLMYRMEAEGFEVDDYIFATILSTCGDIE 601
>AT2G15690.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:6831855-6833594 REVERSE
Length = 579
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 108/203 (53%)
Query: 190 PNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNV 249
P+ + L +C + SL K++H +++ P+L + ++ +G C + +A V
Sbjct: 234 PDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDAKRV 293
Query: 250 FYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLA 309
F +M ++D+ +W ++ AY+ +G AL F M + P++ TFL V AC+ G
Sbjct: 294 FDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLACATVGGI 353
Query: 310 DDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLG 369
++A +F M+ ++G+ P ++HY ++ VL + G L EA IR +P + T W A+
Sbjct: 354 EEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPTADFWEAMRN 413
Query: 370 ACRTYGEVELAEIAGRALFEIEP 392
R +G+++L + + +++P
Sbjct: 414 YARLHGDIDLEDYMEELMVDVDP 436
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 103/234 (44%), Gaps = 43/234 (18%)
Query: 63 LVLKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQR 122
L+ +SC+ + + +H H ++ F +P + ++ M+G+C S A+++FD + +
Sbjct: 241 LLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDAKRVFDHMVDK 300
Query: 123 NVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWR 182
++ W+ M+ Y+ + DAL++F+ M T+ G
Sbjct: 301 DMDSWHLMMCAYSDNGMGDDALHLFEEM------------------TKHG---------- 332
Query: 183 MRELSLKPNLITLLALLRACVRMTSLNMIKE--IHGCSIRNH--IDPHPQLRSGLVEAYG 238
LKPN T L + AC ++ I+E +H S++N I P + G++ G
Sbjct: 333 -----LKPNEETFLTVFLACA---TVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLG 384
Query: 239 RCGCLINASNVFYNMK-ERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLP 291
+CG L+ A ++ E W ++ + LHG+ LE + M V P
Sbjct: 385 KCGHLVEAEQYIRDLPFEPTADFWEAMRNYARLHGDI--DLEDYMEELMVDVDP 436
>AT2G25580.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 21 plant
structures; EXPRESSED DURING: 12 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT4G32450.1); Has 7881 Blast hits to 3723
proteins in 97 species: Archae - 0; Bacteria - 6;
Metazoa - 6; Fungi - 16; Plants - 7829; Viruses - 0;
Other Eukaryotes - 24 (source: NCBI BLink). |
chr2:10888102-10889949 FORWARD
Length = 615
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 98/204 (48%), Gaps = 4/204 (1%)
Query: 191 NLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSG--LVEAYGRCGCLINASN 248
+L LL L + C L K +HG I + H L S L+E Y CG A++
Sbjct: 253 DLSRLLRLAKICGEAEGLQEAKTVHG-KISASV-SHLDLSSNHVLLEMYSNCGLANEAAS 310
Query: 249 VFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGL 308
VF M E+++ W +I +A +G A++ F + +PD F + AC G
Sbjct: 311 VFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGD 370
Query: 309 ADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALL 368
D+ L +F M +DYG+ PS + Y LV++ + G L EA + + MP++ V W L+
Sbjct: 371 VDEGLLHFESMSRDYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLM 430
Query: 369 GACRTYGEVELAEIAGRALFEIEP 392
R +G +EL + + ++P
Sbjct: 431 NLSRVHGNLELGDYCAEVVEFLDP 454
>AT3G18110.1 | Symbols: EMB1270 | EMB1270 (embryo defective 1270) |
chr3:6204940-6209691 REVERSE
Length = 1429
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 131/291 (45%), Gaps = 13/291 (4%)
Query: 124 VVVWNAMISLYTHSNCVSDALYMFDAMH---VAPDASTFNAII-AGLAGTEDGSAKAIAF 179
V V+NAM+ +Y+ S S A + DAM PD +FN +I A L A+
Sbjct: 225 VQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVEL 284
Query: 180 YWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGR 239
+R L+P+ IT LL AC R ++L+ ++ + P + ++ YGR
Sbjct: 285 LDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGR 344
Query: 240 CGCLINASNVFYNMKER----DVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDIT 295
CG A +F ++ + D V ++SL+ A+A E + M+ D++T
Sbjct: 345 CGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMT 404
Query: 296 FLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGM 355
+ ++ G D AL + M+ G P + Y+ L+D L +A R EA ++ M
Sbjct: 405 YNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEM 464
Query: 356 ---PVKVTVKAWGALLGACRTYGEVELAEIAGRALFE--IEPDNPANYVLL 401
+K T++ + AL+ G+ E AE + +PDN A V+L
Sbjct: 465 LDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVML 515
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 145/330 (43%), Gaps = 44/330 (13%)
Query: 112 ARKLFDEIP----QRNVVVWNAMISLYTHSNCVSDALYMFDAMHVA---PDASTFNAIIA 164
A K+F+++ Q ++ +NAMIS+Y ++A +F + + PDA T+N+++
Sbjct: 316 AVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLY 375
Query: 165 GLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMI----KEIHGCSIR 220
A E + K Y +M+++ + +T ++ + L++ K++ G S R
Sbjct: 376 AFA-RERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGR 434
Query: 221 NHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVV----AWSSLISAYALHGEARS 276
N P + L+++ G+ + A+ + M + + +S+LI YA G+
Sbjct: 435 N---PDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREE 491
Query: 277 ALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLV 336
A +TF M + PD++ + +L A + M D G PS Y ++
Sbjct: 492 AEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISD-GHTPSYTLYELMI 550
Query: 337 DVLSRAGRLYEAYDIIRGM-------PVKVT---VKAWGALLGACRTYGEVELAEIAGRA 386
L + R + IR M P++++ VK G C +L ++A
Sbjct: 551 LGLMKENRSDDIQKTIRDMEELCGMNPLEISSVLVK------GECFDLAARQL-KVAITN 603
Query: 387 LFEIEPDNPANYVLLARI--YASMGRHGEA 414
+E+E D LL+ + Y+S GRH EA
Sbjct: 604 GYELEND-----TLLSILGSYSSSGRHSEA 628
>AT2G34370.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:14510482-14511891 FORWARD
Length = 469
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 90/188 (47%), Gaps = 6/188 (3%)
Query: 195 LLALLRACVRMTSLNMIKEIHGCSIRNHIDP-HPQLRSGLVEAYGRCGCLINASNVFYNM 253
LL L + C + +L + +H C I P + ++E Y C +A NVF M
Sbjct: 115 LLGLAKLCGEVEALEEARVVHDC-----ITPLDARSYHTVIEMYSGCRSTDDALNVFNEM 169
Query: 254 KERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDAL 313
+R+ W ++I A +GE A++ F PD F AV AC G ++ L
Sbjct: 170 PKRNSETWGTMIRCLAKNGEGERAIDMFTRFIEEGNKPDKEIFKAVFFACVSIGDINEGL 229
Query: 314 DYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRT 373
+F M +DYG+ S + Y ++++L+ G L EA D + M V+ +V+ W L+ C
Sbjct: 230 LHFESMYRDYGMVLSMEDYVNVIEMLAACGHLDEALDFVERMTVEPSVEMWETLMNLCWV 289
Query: 374 YGEVELAE 381
G +EL +
Sbjct: 290 QGYLELGD 297
>AT5G41170.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:16478860-16480443 REVERSE
Length = 527
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 79/346 (22%), Positives = 161/346 (46%), Gaps = 16/346 (4%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
+I +TK LN K + + +H+Q + +S D Y +L++ + L ++
Sbjct: 72 IIDFTKLLNVIAKMKKFDVVINLCDHLQI-MGVSHDLYTCNLLMNCFCQSSQPYLASSFL 130
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQR----NVVVWNAMISLYTHS 137
+K+GF + +L++ + A + +++ + +VV++ +I +
Sbjct: 131 GKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKN 190
Query: 138 NCVSDALYMFDAMH---VAPDASTFNAIIAGLAGTEDGSAK-AIAFYWRMRELSLKPNLI 193
V+ AL +FD M + PD + +++ GL + G + A + M + +KP++I
Sbjct: 191 GHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNS--GRWRDADSLLRGMTKRKIKPDVI 248
Query: 194 TLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNM 253
T AL+ A V+ +E++ IR I P+ + L+ + GC+ A +FY M
Sbjct: 249 TFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLM 308
Query: 254 KER----DVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLA 309
+ + DVVA++SLI+ + + A++ F+ M + + IT+ +++ G
Sbjct: 309 ETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKP 368
Query: 310 DDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGM 355
+ A + F+ M G+ P+ Y+ L+ L G++ +A I M
Sbjct: 369 NVAQEVFSHMVSR-GVPPNIRTYNVLLHCLCYNGKVKKALMIFEDM 413
>AT2G31400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:13387201-13390550 REVERSE
Length = 918
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 142/304 (46%), Gaps = 24/304 (7%)
Query: 128 NAMISLYTHSNCVSDALYMFDAMHVAPDAST---FNAIIA--GLAGTEDGSAKAIAFYWR 182
+AMIS V+ A +F+ +T F+A+I+ G +G + +AI+ +
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHE---EAISVFNS 293
Query: 183 MRELSLKPNLITLLALLRACVRM-TSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCG 241
M+E L+PNL+T A++ AC + + + RN + P + L+ R G
Sbjct: 294 MKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGG 353
Query: 242 CLINASNVFYNMK----ERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFL 297
A N+F M E+DV ++++L+ A G+ A E M + +++P+ +++
Sbjct: 354 LWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYS 413
Query: 298 AVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMP- 356
V+ + AG D+AL+ F M+ G+ Y+ L+ + ++ GR EA DI+R M
Sbjct: 414 TVIDGFAKAGRFDEALNLFGEMRY-LGIALDRVSYNTLLSIYTKVGRSEEALDILREMAS 472
Query: 357 --VKVTVKAWGALLGACRTYGEVELAEIAGRALFEIEPD----NPANYVLLARIYASMGR 410
+K V + ALLG YG+ + + E++ + N Y L Y+ G
Sbjct: 473 VGIKKDVVTYNALLGG---YGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGL 529
Query: 411 HGEA 414
+ EA
Sbjct: 530 YKEA 533
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 74/358 (20%), Positives = 157/358 (43%), Gaps = 29/358 (8%)
Query: 29 LNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSC--SAIHRSQLGAAIHSHSIK 86
++++ + G H++A+ VFN ++ L + + V+ +C + Q+ A +
Sbjct: 275 ISAYGRSGLHEEAISVFNSMK-EYGLRPNLVTYNAVIDACGKGGMEFKQV-AKFFDEMQR 332
Query: 87 MGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQR----NVVVWNAMISLYTHSNCVSD 142
G + +L+ + + +AR LFDE+ R +V +N ++ +
Sbjct: 333 NGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDL 392
Query: 143 ALYMFDAMHVA---PDASTFNAIIAGL--AGTEDGSAKAIAFYWRMRELSLKPNLITLLA 197
A + M V P+ +++ +I G AG D +A+ + MR L + + ++
Sbjct: 393 AFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFD---EALNLFGEMRYLGIALDRVSYNT 449
Query: 198 LLRACVRM----TSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNM 253
LL ++ +L++++E+ I+ + + + L+ YG+ G VF M
Sbjct: 450 LLSIYTKVGRSEEALDILREMASVGIKKDVVTY----NALLGGYGKQGKYDEVKKVFTEM 505
Query: 254 KER----DVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLA 309
K +++ +S+LI Y+ G + A+E F + A + D + + A++ A GL
Sbjct: 506 KREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLV 565
Query: 310 DDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGAL 367
A+ M ++ G+ P+ Y+ ++D R+ + + D G + + A AL
Sbjct: 566 GSAVSLIDEMTKE-GISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSAL 622
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 95/197 (48%), Gaps = 12/197 (6%)
Query: 228 QLRSGLVEAYGRCGCLINASNVFYNM----KERDVVAWSSLISAYALHGEARSALETFHH 283
+L S ++ GR G + A +F V A+S+LISAY G A+ F+
Sbjct: 234 KLASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNS 293
Query: 284 MEMAKVLPDDITFLAVLKACSHAGLA-DDALDYFARMQQDYGLQPSSDHYSCLVDVLSRA 342
M+ + P+ +T+ AV+ AC G+ +F MQ++ G+QP ++ L+ V SR
Sbjct: 294 MKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRN-GVQPDRITFNSLLAVCSRG 352
Query: 343 GRLYEA----YDIIRGMPVKVTVKAWGALLGACRTYGEVELA-EIAGRALFEIEPDNPAN 397
G L+EA +D + ++ V ++ LL A G+++LA EI + + N +
Sbjct: 353 G-LWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVS 411
Query: 398 YVLLARIYASMGRHGEA 414
Y + +A GR EA
Sbjct: 412 YSTVIDGFAKAGRFDEA 428
>AT4G32450.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:15661092-15662705 FORWARD
Length = 537
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 76/149 (51%), Gaps = 2/149 (1%)
Query: 233 LVEAYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPD 292
++E Y CG + +A VF +M ER++ W +I +A +G+ A++TF + PD
Sbjct: 222 IIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFKQEGNKPD 281
Query: 293 DITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDII 352
F + AC G ++ L +F M ++YG+ P +HY LV +L+ G L EA +
Sbjct: 282 GEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVSLVKMLAEPGYLDEALRFV 341
Query: 353 RGMPVKVTVKAWGALLGACRTYGEVELAE 381
M V + W L+ R +G++ L +
Sbjct: 342 ESMEPNVDL--WETLMNLSRVHGDLILGD 368
>AT1G29710.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:10387673-10389100 FORWARD
Length = 475
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 89/191 (46%)
Query: 191 NLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVF 250
+LI LL L + C + +L + +H C I R+ ++E Y C + +A VF
Sbjct: 118 DLIRLLGLAKLCGKPEALEAARVVHECIIALVSPCDVGARNAIIEMYSGCCSVDDALKVF 177
Query: 251 YNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLAD 310
M E + ++ + +G A++ F + P+ F V C+ G
Sbjct: 178 EEMPEWNSGTLCVMMRCFVNNGYGEEAIDLFTRFKEEGNKPNGEIFNQVFSTCTLTGDVK 237
Query: 311 DALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGA 370
+ F M ++YG+ PS +HY + +L+ +G L EA + + MP++ +V W L+
Sbjct: 238 EGSLQFQAMYREYGIVPSMEHYHSVTKMLATSGHLDEALNFVERMPMEPSVDVWETLMNL 297
Query: 371 CRTYGEVELAE 381
R +G+VEL +
Sbjct: 298 SRVHGDVELGD 308
>AT2G18940.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:8203873-8206341 REVERSE
Length = 822
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 136/335 (40%), Gaps = 41/335 (12%)
Query: 112 ARKLFDEIPQR----NVVVWNAMISLYTHSNCVSDALYMFDAMH---VAPDASTFNAIIA 164
A KL D+IP + +V + ++ Y+ + A+ +F+ M +P T+N I+
Sbjct: 194 AAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILD 253
Query: 165 GLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHID 224
K + MR LK + T +L AC R L KE +
Sbjct: 254 VFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYE 313
Query: 225 PHPQLRSGLVEAYGRCGCLINASNVFYNMKER----DVVAWSSLISAYALHGEARSALET 280
P + L++ +G+ G A +V M+E D V ++ L++AY G ++ A
Sbjct: 314 PGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGV 373
Query: 281 FHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLS 340
M V+P+ IT+ V+ A AG D+AL F M++ G P++ Y+ ++ +L
Sbjct: 374 IEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKE-AGCVPNTCTYNAVLSLLG 432
Query: 341 RAGRLYEAYDIIRGM------PVKVTVKAWGALLGACRTYGEVELAEIAGRALFEI---- 390
+ R E ++ M P + T W +L C G + + R E+
Sbjct: 433 KKSRSNEMIKMLCDMKSNGCSPNRAT---WNTMLALCGNKG---MDKFVNRVFREMKSCG 486
Query: 391 -EPDNPANYVLL------------ARIYASMGRHG 412
EPD L+ +++Y M R G
Sbjct: 487 FEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAG 521
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 73/335 (21%), Positives = 136/335 (40%), Gaps = 53/335 (15%)
Query: 22 LISWTKQLNSHVKQGFH-QQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAI 80
L+++ L+ K G ++ L V + ++ S L D + S VL +C+ +
Sbjct: 245 LVTYNVILDVFGKMGRSWRKILGVLDEMR-SKGLKFDEFTCSTVLSACAREGLLREAKEF 303
Query: 81 HSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQR----NVVVWNAMISLYTH 136
+ G+ AL+ ++GK A + E+ + + V +N +++ Y
Sbjct: 304 FAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVR 363
Query: 137 SNCVSDA---LYMFDAMHVAPDASTFNAIIA--GLAGTEDGSAKAIAFYWRMRELSLKPN 191
+ +A + M V P+A T+ +I G AG ED +A+ ++ M+E PN
Sbjct: 364 AGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKED---EALKLFYSMKEAGCVPN 420
Query: 192 LITLLALLRACVRMTSLN-MIKEI-----HGCSIR--------------------NHI-- 223
T A+L + + N MIK + +GCS N +
Sbjct: 421 TCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFR 480
Query: 224 -------DPHPQLRSGLVEAYGRCGCLINASNVFYNMKERD----VVAWSSLISAYALHG 272
+P + L+ AYGRCG ++AS ++ M V +++L++A A G
Sbjct: 481 EMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKG 540
Query: 273 EARSALETFHHMEMAKVLPDDITFLAVLKACSHAG 307
+ RS M+ P + ++ +L+ + G
Sbjct: 541 DWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGG 575
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/307 (21%), Positives = 129/307 (42%), Gaps = 31/307 (10%)
Query: 88 GFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRN----VVVWNAMISLYTH------- 136
GF + L+ YG+C S A K++ E+ + V +NA+++
Sbjct: 486 GFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSG 545
Query: 137 SNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIA-FYWRMRELSLKPNLITL 195
N +SD + P ++++ ++ A + G+ I R++E + P+ + L
Sbjct: 546 ENVISD----MKSKGFKPTETSYSLMLQCYA--KGGNYLGIERIENRIKEGQIFPSWMLL 599
Query: 196 LALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKE 255
LL A + +L + ++ P + + ++ + R A + +++E
Sbjct: 600 RTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIRE 659
Query: 256 R----DVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADD 311
D+V ++SL+ Y GE A E +E +++ PD +++ V+K GL +
Sbjct: 660 DGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQE 719
Query: 312 ALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGM------PVKVTVKAWG 365
A+ + M + G++P Y+ V + G E D+I M P ++T K
Sbjct: 720 AVRMLSEMTE-RGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKM-- 776
Query: 366 ALLGACR 372
+ G CR
Sbjct: 777 VVDGYCR 783
>AT1G62680.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:
shoot apex, leaf whorl, flower, seed; EXPRESSED DURING:
F mature embryo stage, petal differentiation and
expansion stage; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT1G63130.1); Has
26421 Blast hits to 6237 proteins in 192 species: Archae
- 5; Bacteria - 22; Metazoa - 845; Fungi - 755; Plants -
23373; Viruses - 0; Other Eukaryotes - 1421 (source:
NCBI BLink). | chr1:23208247-23209893 REVERSE
Length = 548
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/387 (22%), Positives = 171/387 (44%), Gaps = 27/387 (6%)
Query: 13 MSYSSNYLRLISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIH 72
M S + ++ + + L++ VK + + + ++ L + D Y ++V+
Sbjct: 76 MVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEV-LGIRNDLYTFNIVINCFCCCF 134
Query: 73 RSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQ----RNVVVWN 128
+ L +I +K+G+ + +LV+ + + A L D++ + ++V +N
Sbjct: 135 QVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYN 194
Query: 129 AMISLYTHSNCVSDALYMFDAMH---VAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRE 185
A+I + V+DA F + + P+ T+ A++ GL + S A M +
Sbjct: 195 AIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWS-DAARLLSDMIK 253
Query: 186 LSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCL-- 243
+ PN+IT ALL A V+ + KE+ +R IDP S L+ CL
Sbjct: 254 KKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGL----CLHD 309
Query: 244 -INASNVFYNMKER-----DVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFL 297
I+ +N +++ DVV++++LI+ + ++ F M ++ + +T+
Sbjct: 310 RIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYN 369
Query: 298 AVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPV 357
+++ AG D A ++F++M +G+ P Y+ L+ L G L +A I M
Sbjct: 370 TLIQGFFQAGDVDKAQEFFSQMDF-FGISPDIWTYNILLGGLCDNGELEKALVIFEDMQK 428
Query: 358 KV----TVKAWGALLGACRTYGEVELA 380
+ V + G C+T G+VE A
Sbjct: 429 REMDLDIVTYTTVIRGMCKT-GKVEEA 454
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/320 (20%), Positives = 136/320 (42%), Gaps = 29/320 (9%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLS---LVLKSCSAIHRSQLGA 78
++++ ++S K A F I+ + P V++ LV C++ S A
Sbjct: 190 IVAYNAIIDSLCKTKRVNDAFDFFKEIERK---GIRPNVVTYTALVNGLCNSSRWSD-AA 245
Query: 79 AIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQR----NVVVWNAMISLY 134
+ S IK N AL+D + K A++LF+E+ + ++V ++++I+
Sbjct: 246 RLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGL 305
Query: 135 THSNCVSDALYMFDAM---HVAPDASTFNAIIAGLAG---TEDGSAKAIAFYWRMRELSL 188
+ + +A MFD M D ++N +I G EDG + + M + L
Sbjct: 306 CLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDG----MKLFREMSQRGL 361
Query: 189 KPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRC--GCLINA 246
N +T L++ + ++ +E S + P + + + G C G L A
Sbjct: 362 VSNTVTYNTLIQGFFQAGDVDKAQEFF--SQMDFFGISPDIWTYNILLGGLCDNGELEKA 419
Query: 247 SNVFYNMKER----DVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKA 302
+F +M++R D+V ++++I G+ A F + + + PD +T+ ++
Sbjct: 420 LVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSG 479
Query: 303 CSHAGLADDALDYFARMQQD 322
GL + + +M+Q+
Sbjct: 480 LCTKGLLHEVEALYTKMKQE 499
>AT5G02860.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:654102-656561 FORWARD
Length = 819
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 141/332 (42%), Gaps = 25/332 (7%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
LI++ LN K G + S ++ D Y + ++ C Q A +
Sbjct: 243 LITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVF 302
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIP----QRNVVVWNAMISLYTHS 137
GF + AL+D+YGK A K+ +E+ ++V +N++IS Y
Sbjct: 303 EEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARD 362
Query: 138 NCVSDALYMFDAM---HVAPDASTFNAIIAGL--AGTEDGSAKAIAFYWRMRELSLKPNL 192
+ +A+ + + M PD T+ +++G AG + A++ + MR KPN+
Sbjct: 363 GMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVES---AMSIFEEMRNAGCKPNI 419
Query: 193 ITLLALLRA-CVRMTSLNMIK---EIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASN 248
T A ++ R M+K EI+ C + P + L+ +G+ G S
Sbjct: 420 CTFNAFIKMYGNRGKFTEMMKIFDEINVCGL----SPDIVTWNTLLAVFGQNGMDSEVSG 475
Query: 249 VFYNMKERDVV----AWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACS 304
VF MK V +++LISAY+ G A+ + M A V PD T+ VL A +
Sbjct: 476 VFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALA 535
Query: 305 HAGLADDALDYFARMQQDYGLQPSSDHYSCLV 336
G+ + + A M +D +P+ Y L+
Sbjct: 536 RGGMWEQSEKVLAEM-EDGRCKPNELTYCSLL 566
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 79/400 (19%), Positives = 151/400 (37%), Gaps = 62/400 (15%)
Query: 7 LNQLRIMSYSSNYLRLISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLK 66
LN++ + +S + ++++ ++++ + G +A+ + N + D + + +L
Sbjct: 337 LNEMVLNGFSPS---IVTYNSLISAYARDGMLDEAMELKNQMAEK-GTKPDVFTYTTLLS 392
Query: 67 SCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIP----QR 122
+ + +I G N A + MYG K+FDEI
Sbjct: 393 GFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSP 452
Query: 123 NVVVWNAMISLYTHSNCVSDALYMFDAMH------------------------------- 151
++V WN +++++ + S+ +F M
Sbjct: 453 DIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVY 512
Query: 152 -------VAPDASTFNAIIAGLA--GTEDGSAKAIAFYWRMRELSLKPNLITLLALLRAC 202
V PD ST+N ++A LA G + S K +A M + KPN +T +LL A
Sbjct: 513 RRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLA---EMEDGRCKPNELTYCSLLHAY 569
Query: 203 VRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKER----DV 258
+ ++ + I+P L LV +C L A F +KER D+
Sbjct: 570 ANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDI 629
Query: 259 VAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHA---GLADDALDY 315
+S++S Y A +M+ P T+ +++ S + G +++ L
Sbjct: 630 TTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEIL-- 687
Query: 316 FARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGM 355
R G++P Y+ ++ R R+ +A I M
Sbjct: 688 --REILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEM 725
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/297 (21%), Positives = 118/297 (39%), Gaps = 24/297 (8%)
Query: 90 LSNPFVACALVDMYGKCVSTFSARKLFDEIPQR----NVVVWNAMISLYTHSNCVSDALY 145
L N VA ++ M GK SA +F+ + + +V + ++IS + +S +A+
Sbjct: 171 LDNSVVAI-IISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVN 229
Query: 146 MFDAMH---VAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRAC 202
+F M P T+N I+ K + +M+ + P+ T L+ C
Sbjct: 230 VFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCC 289
Query: 203 VR----MTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMK---- 254
R + + +E+ + + L++ YG+ A V M
Sbjct: 290 KRGSLHQEAAQVFEEMKAAGFSYDKVTY----NALLDVYGKSHRPKEAMKVLNEMVLNGF 345
Query: 255 ERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALD 314
+V ++SLISAYA G A+E + M PD T+ +L AG + A+
Sbjct: 346 SPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMS 405
Query: 315 YFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEA---YDIIRGMPVKVTVKAWGALL 368
F M ++ G +P+ ++ + + G+ E +D I + + W LL
Sbjct: 406 IFEEM-RNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLL 461
>AT1G09680.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3134107-3135930 REVERSE
Length = 607
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 145/330 (43%), Gaps = 18/330 (5%)
Query: 88 GFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRN----VVVWNAMISLYTHSNCVSDA 143
GF N +V L++ + K + A+K+FDEI +R+ VV +N +I+ Y + +
Sbjct: 235 GFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEG 294
Query: 144 LYMFDAMHVA---PDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLR 200
+ M + PD T++A+I L E+ A + M + L PN + L+
Sbjct: 295 FRLKHQMEKSRTRPDVFTYSALINALC-KENKMDGAHGLFDEMCKRGLIPNDVIFTTLIH 353
Query: 201 ACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKER---- 256
R ++++KE + + + P L + LV + + G L+ A N+ M R
Sbjct: 354 GHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRP 413
Query: 257 DVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYF 316
D + +++LI + G+ +ALE M+ + D + F A++ G DA
Sbjct: 414 DKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERAL 473
Query: 317 ARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVK---VTVKAWGALLGACRT 373
M + G++P Y+ ++D + G + +++ M +V + LL
Sbjct: 474 REMLR-AGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCK 532
Query: 374 YGEVELAEIAGRALFEIE--PDNPANYVLL 401
G+++ A++ A+ I PD+ LL
Sbjct: 533 LGQMKNADMLLDAMLNIGVVPDDITYNTLL 562
>AT5G16640.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:5461031-5462545 FORWARD
Length = 504
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 124/283 (43%), Gaps = 13/283 (4%)
Query: 80 IHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQR----NVVVWNAMISLYT 135
+ + MG+ N + ++D K +A L + + + +VV +N++IS
Sbjct: 173 MFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLC 232
Query: 136 HSNCVSDALYMFDAM---HVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNL 192
S SDA M M + PD TFNA+I E ++A FY M SL P++
Sbjct: 233 SSGRWSDATRMVSCMTKREIYPDVFTFNALIDACV-KEGRVSEAEEFYEEMIRRSLDPDI 291
Query: 193 ITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYN 252
+T L+ + L+ +E+ G + P S L+ Y + + + +F
Sbjct: 292 VTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCE 351
Query: 253 MKERDVV----AWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGL 308
M +R VV ++ LI Y G+ A E F M V P+ IT+ +L G
Sbjct: 352 MSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGK 411
Query: 309 ADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDI 351
+ AL A MQ++ G+ Y+ ++ + +AG + +A+DI
Sbjct: 412 IEKALVILADMQKN-GMDADIVTYNIIIRGMCKAGEVADAWDI 453
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 116/270 (42%), Gaps = 12/270 (4%)
Query: 121 QRNVVVWNAMISLYTHSNCVSDALYMFD---AMHVAPDASTFNAIIAGLAGTEDGSAKAI 177
+ ++V + ++++ + + V DALYMFD M P+ +N II GL ++ A+
Sbjct: 148 EPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQ-VDNAL 206
Query: 178 AFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAY 237
RM + + P+++T +L+ + + C + I P + L++A
Sbjct: 207 DLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDAC 266
Query: 238 GRCGCLINASNVFYNMKER----DVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDD 293
+ G + A + M R D+V +S LI ++ A E F M PD
Sbjct: 267 VKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDV 326
Query: 294 ITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIR 353
+T+ ++ + + + F M Q G+ ++ Y+ L+ RAG+L A +I R
Sbjct: 327 VTYSILINGYCKSKKVEHGMKLFCEMSQR-GVVRNTVTYTILIQGYCRAGKLNVAEEIFR 385
Query: 354 GM---PVKVTVKAWGALLGACRTYGEVELA 380
M V + + LL G++E A
Sbjct: 386 RMVFCGVHPNIITYNVLLHGLCDNGKIEKA 415
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 110/251 (43%), Gaps = 25/251 (9%)
Query: 176 AIAFYWRMRELSLKPNLITLLALLRACVR----MTSLNMIKEIHGCSIRNHIDPHPQLRS 231
A++F +M +L +P+++T +LL R +L M ++ G + ++ + +
Sbjct: 135 ALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIID 194
Query: 232 GLVEAYGRCGCLINASNVFYNMKER----DVVAWSSLISAYALHGEARSALETFHHMEMA 287
GL ++ + NA ++ M++ DVV ++SLIS G A M
Sbjct: 195 GLCKSKQ----VDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKR 250
Query: 288 KVLPDDITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYE 347
++ PD TF A++ AC G +A +++ M + L P YS L+ L RL E
Sbjct: 251 EIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRR-SLDPDIVTYSLLIYGLCMYSRLDE 309
Query: 348 AYDIIRGMPVK---VTVKAWGALL-GACRT----YGEVELAEIAGRALFEIEPDNPANYV 399
A ++ M K V + L+ G C++ +G E++ R + N Y
Sbjct: 310 AEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVR----NTVTYT 365
Query: 400 LLARIYASMGR 410
+L + Y G+
Sbjct: 366 ILIQGYCRAGK 376
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/337 (20%), Positives = 140/337 (41%), Gaps = 23/337 (6%)
Query: 7 LNQLRIMSYSSNYLRLISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVL---SL 63
+Q+ M Y N ++ + ++ K AL + N ++ + P V+ SL
Sbjct: 174 FDQMVGMGYKPN---VVIYNTIIDGLCKSKQVDNALDLLNRMEKD---GIGPDVVTYNSL 227
Query: 64 VLKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQR- 122
+ CS+ S + S K + F AL+D K A + ++E+ +R
Sbjct: 228 ISGLCSSGRWSD-ATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRS 286
Query: 123 ---NVVVWNAMISLYTHSNCVSDALYMFDAM---HVAPDASTFNAIIAGLAGTEDGSAKA 176
++V ++ +I + + +A MF M PD T++ +I G ++
Sbjct: 287 LDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKK-VEHG 345
Query: 177 IAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHG----CSIRNHIDPHPQLRSG 232
+ + M + + N +T L++ R LN+ +EI C + +I + L G
Sbjct: 346 MKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHG 405
Query: 233 LVEAYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPD 292
L + L+ +++ N + D+V ++ +I GE A + + + ++PD
Sbjct: 406 LCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPD 465
Query: 293 DITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSS 329
T+ ++ GL +A F +M++D G+ P+
Sbjct: 466 IWTYTTMMLGLYKKGLRREADALFRKMKED-GILPNE 501
>AT2G01740.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:326136-327815 REVERSE
Length = 559
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/304 (22%), Positives = 135/304 (44%), Gaps = 39/304 (12%)
Query: 62 SLVLKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEI-- 119
SLVL+S A H GF+ P + + + FS K+ DE+
Sbjct: 111 SLVLESLRASH---------------GFICKPDIVS-----FNSLFNGFSKMKMLDEVFV 150
Query: 120 --------PQRNVVVWNAMISLYTHSNCVSDALYMFDAMH---VAPDASTFNAIIAGLAG 168
NVV ++ I + S + AL F +M ++P+ TF +I G
Sbjct: 151 YMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCK 210
Query: 169 TEDGSAKAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQ 228
D A++ Y MR + + N++T AL+ + + +E++ + + ++P+
Sbjct: 211 AGDLEV-AVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSL 269
Query: 229 LRSGLVEAYGRCGCLINASNVFYNMKER----DVVAWSSLISAYALHGEARSALETFHHM 284
+ + +++ + + G NA M + D+ A+ +IS +G+ + A E M
Sbjct: 270 VYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDM 329
Query: 285 EMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGR 344
E + ++PD + F ++ A +G A++ + ++ + G +P S ++D +++ G+
Sbjct: 330 EKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIE-RGFEPDVVALSTMIDGIAKNGQ 388
Query: 345 LYEA 348
L+EA
Sbjct: 389 LHEA 392
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/246 (19%), Positives = 113/246 (45%), Gaps = 15/246 (6%)
Query: 121 QRNVVVWNAMISLYTHSNCVSDALYMFDAMHVA------PDASTFNAIIAGLAGTEDGSA 174
+ +V+ +N++I + + + A + +++ + PD +FN++ G + +
Sbjct: 88 EPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMK--ML 145
Query: 175 KAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNM-IKEIHGCSIRNHIDPHPQLRSGL 233
+ Y + PN++T + + L + +K H R+ + P+ + L
Sbjct: 146 DEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMK-RDALSPNVVTFTCL 204
Query: 234 VEAYGRCGCLINASNVFYNMKE----RDVVAWSSLISAYALHGEARSALETFHHMEMAKV 289
++ Y + G L A +++ M+ +VV +++LI + GE + A E + M +V
Sbjct: 205 IDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRV 264
Query: 290 LPDDITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAY 349
P+ + + ++ G +D+A+ + A+M + G++ Y ++ L G+L EA
Sbjct: 265 EPNSLVYTTIIDGFFQRGDSDNAMKFLAKM-LNQGMRLDITAYGVIISGLCGNGKLKEAT 323
Query: 350 DIIRGM 355
+I+ M
Sbjct: 324 EIVEDM 329
>AT1G31840.1 | Symbols: | LOCATED IN: endomembrane system;
EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11
growth stages; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT3G22470.1); Has
23098 Blast hits to 5773 proteins in 180 species: Archae
- 3; Bacteria - 16; Metazoa - 407; Fungi - 450; Plants -
21304; Viruses - 0; Other Eukaryotes - 918 (source: NCBI
BLink). | chr1:11424006-11426528 FORWARD
Length = 840
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 165/368 (44%), Gaps = 21/368 (5%)
Query: 77 GAAIHSHSIKMGFLSNPFVACALVDMYGKC-----VSTFSARKLFDEIPQRNVVVWNAMI 131
G A++ IKMG+ + + LVD K FS + L I + NVVV+N++I
Sbjct: 445 GFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSI-RLNVVVFNSLI 503
Query: 132 SLYTHSNCVSDALYMFDAMHV---APDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSL 188
+ N +AL +F M + PD +TF ++ ++ E +A+ ++RM ++ L
Sbjct: 504 DGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMR-VSIMEGRLEEALFLFFRMFKMGL 562
Query: 189 KPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASN 248
+P+ + L+ A + + ++ RN I + + ++ +C + +AS
Sbjct: 563 EPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASK 622
Query: 249 VFYNM----KERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACS 304
F N+ E D+V ++++I Y A F +++ P+ +T ++
Sbjct: 623 FFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLC 682
Query: 305 HAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVK---VTV 361
D A+ F+ M + G +P++ Y CL+D S++ + ++ + M K ++
Sbjct: 683 KNNDMDGAIRMFSIMAEK-GSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSI 741
Query: 362 KAWGALL-GACRTYGEVELAEIAGRAL-FEIEPDNPANYVLLARIYASMGRHGEAXXXXX 419
++ ++ G C+ E I +A+ ++ PD A Y +L R Y +GR EA
Sbjct: 742 VSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVA-YAILIRGYCKVGRLVEAALLYE 800
Query: 420 XXXXXGVK 427
GVK
Sbjct: 801 HMLRNGVK 808
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 118/256 (46%), Gaps = 15/256 (5%)
Query: 98 ALVDMYGKCVSTFSARKLFDEIPQR----NVVVWNAMISLYTHSNCVSDALYMFDAM--- 150
L+D Y K KLF + + +VVV+++ I +Y S ++ A ++ M
Sbjct: 326 TLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQ 385
Query: 151 HVAPDASTFNAIIAGLAGTEDGSA-KAIAFYWRMRELSLKPNLITLLALLRACVRMTSLN 209
++P+ T+ +I GL +DG +A Y ++ + ++P+++T +L+ + +L
Sbjct: 386 GISPNVVTYTILIKGLC--QDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLR 443
Query: 210 MIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKER----DVVAWSSLI 265
++ I+ P + LV+ + G +++A M + +VV ++SLI
Sbjct: 444 SGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLI 503
Query: 266 SAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQDYGL 325
+ AL+ F M + + PD TF V++ G ++AL F RM + GL
Sbjct: 504 DGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFK-MGL 562
Query: 326 QPSSDHYSCLVDVLSR 341
+P + Y L+D +
Sbjct: 563 EPDALAYCTLIDAFCK 578
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 190 PNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNV 249
PN++T L+ + ++ ++ + I+P S L++ Y + G L +
Sbjct: 284 PNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKL 343
Query: 250 FYNMKER----DVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSH 305
F + DVV +SS I Y G+ +A + M + P+ +T+ ++K
Sbjct: 344 FSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQ 403
Query: 306 AGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAY----DIIR-GMPVKVT 360
G +A + ++ + G++PS YS L+D + G L + D+I+ G P V
Sbjct: 404 DGRIYEAFGMYGQILK-RGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVV 462
Query: 361 VKAWGALLGACRTYG 375
+ +G L+ G
Sbjct: 463 I--YGVLVDGLSKQG 475
>AT1G63330.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23489628-23491519 FORWARD
Length = 558
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 121/269 (44%), Gaps = 14/269 (5%)
Query: 121 QRNVVVWNAMISLYTHSNCVSDALYMFDAMH---VAPDASTFNAIIAGLAGTEDGSAKAI 177
+ +VV++N +I V DAL +F M + P+ T++++I+ L S A
Sbjct: 181 EADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWS-DAS 239
Query: 178 AFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAY 237
M E + PNL+T AL+ A V+ +++H I+ IDP + L+ +
Sbjct: 240 QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGF 299
Query: 238 GRCGCLINASNVFYNMKERDVV----AWSSLISAYALHGEARSALETFHHMEMAKVLPDD 293
L A +F M +D +++LI + E F M ++ D
Sbjct: 300 CMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDT 359
Query: 294 ITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRL---YEAYD 350
+T+ +++ H G D+A F +M D G+ P YS L+D L G+L E +D
Sbjct: 360 VTYTTLIQGLFHDGDCDNAQKVFKQMVSD-GVPPDIMTYSILLDGLCNNGKLEKALEVFD 418
Query: 351 IIRGMPVKVTVKAWGALL-GACRTYGEVE 378
++ +K+ + + ++ G C+ G+V+
Sbjct: 419 YMQKSEIKLDIYIYTTMIEGMCKA-GKVD 446
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 104/244 (42%), Gaps = 17/244 (6%)
Query: 123 NVVVWNAMISLYTHSNCVSDALYMFDAM---HVAPDASTFNAIIAGLAGTEDGSAKAIAF 179
N+V +NA+I + +A + D M + PD T+N++I G D KA
Sbjct: 253 NLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFC-MHDRLDKAKQM 311
Query: 180 YWRMRELSLKPNLITLLALLRACVRMTSLN----MIKEIHGCSIRNHIDPHPQLRSGLVE 235
+ M P+L T L++ + + + +E+ + + L GL
Sbjct: 312 FEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFH 371
Query: 236 AYGRCGCLINASNVFYNMKER----DVVAWSSLISAYALHGEARSALETFHHMEMAKVLP 291
G C NA VF M D++ +S L+ +G+ ALE F +M+ +++
Sbjct: 372 D-GDCD---NAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKL 427
Query: 292 DDITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDI 351
D + +++ AG DD D F + G++P+ Y+ ++ L L EAY +
Sbjct: 428 DIYIYTTMIEGMCKAGKVDDGWDLFCSLSLK-GVKPNVVTYNTMISGLCSKRLLQEAYAL 486
Query: 352 IRGM 355
++ M
Sbjct: 487 LKKM 490
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 112/240 (46%), Gaps = 15/240 (6%)
Query: 121 QRNVVVWNAMISLYTHSNCVSDALYMFD---AMHVAPDASTFNAIIAGLAGTEDGSAKAI 177
+ ++V +++++ Y H +SDA+ + D M PD TF +I GL + +++A+
Sbjct: 76 EPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF-LHNKASEAV 134
Query: 178 AFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAY 237
A RM + +PNL+T ++ + +++ + I+ + + ++++
Sbjct: 135 ALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSL 194
Query: 238 GRCGCLINASNVFYNMKER----DVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDD 293
+ + +A N+F M+ + +VV +SSLIS +G A + M K+ P+
Sbjct: 195 CKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNL 254
Query: 294 ITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYS------CLVDVLSRAGRLYE 347
+TF A++ A G +A M + + P Y+ C+ D L +A +++E
Sbjct: 255 VTFNALIDAFVKEGKFVEAEKLHDDMIK-RSIDPDIFTYNSLINGFCMHDRLDKAKQMFE 313
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 61/283 (21%), Positives = 112/283 (39%), Gaps = 46/283 (16%)
Query: 140 VSDALYMFDAM---HVAPDASTFNAIIAGLAGTEDGS-AKAIAFYWRMRELSLKPNLITL 195
+ DA+ +F M P FN +++ +A + ++A +M +L +P+++TL
Sbjct: 23 LDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPSIVTL 82
Query: 196 LALLRA-C-------------------VRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVE 235
+LL C R ++ IHG + N L +V+
Sbjct: 83 SSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQ 142
Query: 236 AYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDIT 295
GC N +V + +++ G+ A + ME AK+ D +
Sbjct: 143 R----GCQPN------------LVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 186
Query: 296 FLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGM 355
F ++ + DDAL+ F M+ G++P+ YS L+ L GR +A ++ M
Sbjct: 187 FNTIIDSLCKYRHVDDALNLFKEMETK-GIRPNVVTYSSLISCLCSYGRWSDASQLLSDM 245
Query: 356 ---PVKVTVKAWGALLGACRTYGEVELAEIAGRALFE--IEPD 393
+ + + AL+ A G+ AE + + I+PD
Sbjct: 246 IEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPD 288
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD
Length = 831
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 112/248 (45%), Gaps = 11/248 (4%)
Query: 123 NVVVWNAMISLYTH--SNCVSDALYMFDAMH--VAPDASTFNAIIAGLAGTEDGS-AKAI 177
+VV +N + Y S C ++ + + +H V P+ T I+ G E+G +A+
Sbjct: 494 DVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYC--EEGKMEEAL 551
Query: 178 AFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAY 237
F++RM+EL + PNL +L++ + + ++ + E+ + P S L+ A+
Sbjct: 552 RFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAW 611
Query: 238 GRCGCLINASNVFYNMKE----RDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDD 293
G + ++ +M E D+ A+S L YA GE A + + M V P+
Sbjct: 612 SSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNV 671
Query: 294 ITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIR 353
+ + ++ AG A+ + +M GL P+ Y L+ A + ++A ++++
Sbjct: 672 VIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLK 731
Query: 354 GMPVKVTV 361
M K V
Sbjct: 732 DMEGKNVV 739
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 113/276 (40%), Gaps = 44/276 (15%)
Query: 123 NVVVWNAMISLYTHSNCVSDALYMFDAMHVA---PDASTFNAIIAG---LAGTEDGS--- 173
+ +++NA+I+ + S + A+ +F+ M + P ASTFN +I G + E+ S
Sbjct: 388 DTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLL 447
Query: 174 -----------------------------AKAIAFYWRMRELSLKPNLITLLALLRACVR 204
+A ++M+ +KP+++T L +A R
Sbjct: 448 DMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYAR 507
Query: 205 MTSLNMIKE-IHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKE----RDVV 259
+ S ++ I + N + P+ + +V Y G + A FY MKE ++
Sbjct: 508 IGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLF 567
Query: 260 AWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARM 319
++SLI + + E ME V PD +TF ++ A S G + + M
Sbjct: 568 VFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDM 627
Query: 320 QQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGM 355
+ G+ P +S L +RAG +A I+ M
Sbjct: 628 LEG-GIDPDIHAFSILAKGYARAGEPEKAEQILNQM 662
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 88/203 (43%), Gaps = 14/203 (6%)
Query: 189 KPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASN 248
KP+LIT L+ A R + + + +N + P L + ++ A G L A
Sbjct: 351 KPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMK 410
Query: 249 VFYNMKER----DVVAWSSLISAYALHGEARSALETFHHMEMAKVL-PDDITFLAVLKAC 303
+F MKE +++LI Y G+ + M ++L P+D T +++A
Sbjct: 411 IFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAW 470
Query: 304 SHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMP------V 357
+ ++A + +MQ YG++P ++ L +R G A D+I +P V
Sbjct: 471 CNQRKIEEAWNIVYKMQS-YGVKPDVVTFNTLAKAYARIGSTCTAEDMI--IPRMLHNKV 527
Query: 358 KVTVKAWGALLGACRTYGEVELA 380
K V+ G ++ G++E A
Sbjct: 528 KPNVRTCGTIVNGYCEEGKMEEA 550
>AT1G62720.1 | Symbols: | INVOLVED IN: biological_process unknown;
LOCATED IN: cellular_component unknown; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G62680.1); Has 25425
Blast hits to 6071 proteins in 187 species: Archae - 4;
Bacteria - 14; Metazoa - 596; Fungi - 591; Plants -
23031; Viruses - 0; Other Eukaryotes - 1189 (source:
NCBI BLink). | chr1:23227574-23229031 FORWARD
Length = 485
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/384 (21%), Positives = 171/384 (44%), Gaps = 28/384 (7%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
++ ++K L+ K + + +F+H++ + D Y ++V+ R + ++
Sbjct: 69 IVDFSKVLSKIAKSKNYDLVISLFHHMEVC-GIGHDLYSYNIVINCLCRCSRFVIALSVV 127
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQR----NVVVWNAMISLYTHS 137
+K G+ + +L++ + + F A L ++ + +VV++N +I
Sbjct: 128 GKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKI 187
Query: 138 NCVSDALYMFDAMH---VAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLK---PN 191
V+DA+ +FD M V DA T+N+++AGL + S A MR++ ++ PN
Sbjct: 188 GLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARL----MRDMVMRDIVPN 243
Query: 192 LITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFY 251
+IT A++ V+ + +++ R +DP + L+ G + A +
Sbjct: 244 VITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLD 303
Query: 252 NMKER----DVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAG 307
M + DVV +++LI+ + + F M ++ D IT+ +++ AG
Sbjct: 304 LMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAG 363
Query: 308 LADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGM---PVKVTVKAW 364
D A + F+RM +P+ YS L+ L R+ +A + M +++ + +
Sbjct: 364 RPDAAQEIFSRMDS----RPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTY 419
Query: 365 GALL-GACRTYGEVELAEIAGRAL 387
++ G C+ G VE A R+L
Sbjct: 420 NIVIHGMCKI-GNVEDAWDLFRSL 442
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/319 (20%), Positives = 131/319 (41%), Gaps = 21/319 (6%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
++ + ++ K G A+ +F+ ++ + SLV C + R A +
Sbjct: 174 VVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCS-GRWSDAARLM 232
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQR----NVVVWNAMISLYTHS 137
+ + N A++D++ K A KL++E+ +R +V +N++I+
Sbjct: 233 RDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMH 292
Query: 138 NCVSDALYMFDAMHVA---PDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLIT 194
V +A M D M PD T+N +I G ++ + + M + L + IT
Sbjct: 293 GRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKR-VDEGTKLFREMAQRGLVGDTIT 351
Query: 195 LLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGC--LINASNVFYN 252
+++ + + +EI + +D P +R+ + YG C + A +F N
Sbjct: 352 YNTIIQGYFQAGRPDAAQEIF-----SRMDSRPNIRTYSILLYGLCMNWRVEKALVLFEN 406
Query: 253 MK----ERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGL 308
M+ E D+ ++ +I G A + F + + PD +++ ++
Sbjct: 407 MQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQ 466
Query: 309 ADDALDYFARMQQDYGLQP 327
D + + +MQ+D GL P
Sbjct: 467 WDKSDLLYRKMQED-GLLP 484
>AT1G74850.1 | Symbols: PTAC2 | PTAC2 (PLASTID TRANSCRIPTIONALLY
ACTIVE2) | chr1:28119237-28122314 REVERSE
Length = 862
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 116/276 (42%), Gaps = 15/276 (5%)
Query: 114 KLFDEIPQ----RNVVVWNAMISLYTHSNCVSDALYMFDAMH---VAPDASTFNAIIAGL 166
++FDE+P R+V + A+I+ Y + +L + D M ++P T+N +I
Sbjct: 162 EVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINAC 221
Query: 167 AGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPH 226
A + + MR ++P+++T LL AC + + + I P
Sbjct: 222 ARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPD 281
Query: 227 PQLRSGLVEAYGRCGCLINASNVFYNMKE----RDVVAWSSLISAYALHGEARSALETFH 282
S LVE +G+ L ++ M D+ +++ L+ AYA G + A+ FH
Sbjct: 282 LTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFH 341
Query: 283 HMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRA 342
M+ A P+ T+ +L +G DD F M+ P + Y+ L++V
Sbjct: 342 QMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSS-NTDPDAATYNILIEVFGEG 400
Query: 343 GRLYEAYDIIRGM---PVKVTVKAWGALLGACRTYG 375
G E + M ++ ++ + ++ AC G
Sbjct: 401 GYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGG 436
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/304 (21%), Positives = 122/304 (40%), Gaps = 50/304 (16%)
Query: 99 LVDMYGKCVSTFSARKLFDEIP----QRNVVVWNAMISLYTHSNCVSDALYMFDAM---H 151
L++ Y K S A +F ++ N ++ +++L+ S D +F M +
Sbjct: 323 LLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSN 382
Query: 152 VAPDASTFNAIIAGLAGTEDGSAK-AIAFYWRMRELSLKPNLITLLALLRACVRMTSLNM 210
PDA+T+N +I E G K + + M E +++P++ T ++ AC +
Sbjct: 383 TDPDAATYNILIEVFG--EGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHED 440
Query: 211 IKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKE--------------- 255
++I N I P + +G++EA+G+ A F M E
Sbjct: 441 ARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLY 500
Query: 256 ------------------------RDVVAWSSLISAYALHGEARSALETFHHMEMAKVLP 291
R+ +++ I AY G+ A++T+ ME ++ P
Sbjct: 501 SFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDP 560
Query: 292 DDITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDI 351
D+ T AVL S A L D+ + F M+ + PS Y ++ V + R + ++
Sbjct: 561 DERTLEAVLSVYSFARLVDECREQFEEMKAS-DILPSIMCYCMMLAVYGKTERWDDVNEL 619
Query: 352 IRGM 355
+ M
Sbjct: 620 LEEM 623
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 88/200 (44%), Gaps = 12/200 (6%)
Query: 225 PHPQLRSGLVEAYGRCGCLINASNVFYNMKE----RDVVAWSSLISAYALHGEARSALET 280
P+ + + ++ GR G L VF M R V ++++LI+AY +G ++LE
Sbjct: 139 PNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLEL 198
Query: 281 FHHMEMAKVLPDDITFLAVLKACSHAGLA-DDALDYFARMQQDYGLQPSSDHYSCLVDVL 339
M+ K+ P +T+ V+ AC+ GL + L FA M+ + G+QP Y+ L+
Sbjct: 199 LDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHE-GIQPDIVTYNTLLSAC 257
Query: 340 SRAGRLYEAYDIIRGMPVKVTVKAWGALLGACRTYGEVELAEIAGRALFEIE-----PDN 394
+ G EA + R M V T+G++ E L E+ PD
Sbjct: 258 AIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPD- 316
Query: 395 PANYVLLARIYASMGRHGEA 414
+Y +L YA G EA
Sbjct: 317 ITSYNVLLEAYAKSGSIKEA 336
>AT1G62930.1 | Symbols: | INVOLVED IN: biological_process unknown;
EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14
growth stages; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT1G63130.1); Has
29147 Blast hits to 6292 proteins in 192 species: Archae
- 8; Bacteria - 22; Metazoa - 1258; Fungi - 858; Plants
- 25291; Viruses - 0; Other Eukaryotes - 1710 (source:
NCBI BLink). | chr1:23306534-23308423 FORWARD
Length = 629
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 126/269 (46%), Gaps = 14/269 (5%)
Query: 121 QRNVVVWNAMISLYTHSNCVSDALYMFDAMH---VAPDASTFNAIIAGLAGTEDGSAKAI 177
+ +VV++ +I + V+DAL +F M + P+ T+N++I L S A
Sbjct: 252 EADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWS-DAS 310
Query: 178 AFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAY 237
M E + PN++T AL+ A V+ L ++++ I+ IDP S L+ +
Sbjct: 311 RLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 370
Query: 238 GRCGCLINASNVFYNMKERD----VVAWSSLISAYALHGEARSALETFHHMEMAKVLPDD 293
L A ++F M +D VV +++LI + +E F M ++ +
Sbjct: 371 CMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNT 430
Query: 294 ITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEA---YD 350
+T+ +++ AG D A F +M D G+ P YS L+D L + G+L +A ++
Sbjct: 431 VTYNTLIQGLFQAGDCDMAQKIFKKMVSD-GVPPDIITYSILLDGLCKYGKLEKALVVFE 489
Query: 351 IIRGMPVKVTVKAWGALL-GACRTYGEVE 378
++ ++ + + ++ G C+ G+VE
Sbjct: 490 YLQKSKMEPDIYTYNIMIEGMCKA-GKVE 517
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 93/423 (21%), Positives = 176/423 (41%), Gaps = 54/423 (12%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
++ + K L++ K + + +Q +L +S D Y ++++ + L A+
Sbjct: 80 IVEFNKLLSAIAKMNKFDLVISLGERMQ-NLRISYDLYSYNILINCFCRRSQLPLALAVL 138
Query: 82 SHSIKMGFLSNPFVACALVDMY--GKCVSTFSA--RKLFDEIPQRNVVVWNAMI-SLYTH 136
+K+G+ + +L++ Y GK +S A ++F Q N V +N +I L+ H
Sbjct: 139 GKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLH 198
Query: 137 SNCVSDALYMFDAM---HVAPDASTFNAIIAGL-------------AGTEDGSAKA---- 176
N S+A+ + D M PD T+ ++ GL E G +A
Sbjct: 199 -NKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 257
Query: 177 -----------------IAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSI 219
+ + M ++PN++T +L+R + + I
Sbjct: 258 YTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI 317
Query: 220 RNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKER----DVVAWSSLISAYALHGEAR 275
I+P+ S L++A+ + G L+ A ++ M +R D+ +SSLI+ + +H
Sbjct: 318 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 377
Query: 276 SALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCL 335
A F M P+ +T+ ++K A ++ ++ F M Q GL ++ Y+ L
Sbjct: 378 EAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQ-RGLVGNTVTYNTL 436
Query: 336 VDVLSRAGRLYEAYDIIRGM---PVKVTVKAWGALLGACRTYGEVELAEIAGRAL--FEI 390
+ L +AG A I + M V + + LL YG++E A + L ++
Sbjct: 437 IQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKM 496
Query: 391 EPD 393
EPD
Sbjct: 497 EPD 499
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 125/277 (45%), Gaps = 15/277 (5%)
Query: 92 NPFVAC--ALVDMYGKCVSTFSARKLFDEIPQR----NVVVWNAMISLYTHSNCVSDALY 145
NP V AL+D + K A KL+DE+ +R ++ ++++I+ + + + +A +
Sbjct: 322 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH 381
Query: 146 MFDAM---HVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRAC 202
MF+ M P+ T+N +I G + + + + M + L N +T L++
Sbjct: 382 MFELMISKDCFPNVVTYNTLIKGFCKAKR-VEEGMELFREMSQRGLVGNTVTYNTLIQGL 440
Query: 203 VRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMK----ERDV 258
+ +M ++I + + + P S L++ + G L A VF ++ E D+
Sbjct: 441 FQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDI 500
Query: 259 VAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFAR 318
++ +I G+ + F + + V P+ I + ++ GL ++A F
Sbjct: 501 YTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFRE 560
Query: 319 MQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGM 355
M++D G P+S Y+ L+ R G + ++I+ M
Sbjct: 561 MKED-GTLPNSGTYNTLIRARLRDGDKAASAELIKEM 596
>AT1G05670.2 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transferase
family protein | chr1:1698574-1702715 REVERSE
Length = 1184
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 117/270 (43%), Gaps = 17/270 (6%)
Query: 99 LVDMYGKCVSTFSARKLFDEIPQR----NVVVWNAMISLYTHSNCVSDALYMFDAMHV-- 152
L + C T +A +F E P+ NV +N +I + +A ++ M +
Sbjct: 660 LTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKG 719
Query: 153 -APDASTFNAIIAGLA--GTEDGSAKAIAFYWRMRELSLKPNLITLLALLRACVRMTSLN 209
PD +++ ++ G G D K I M+ LKPN +++ R+ L
Sbjct: 720 YTPDVISYSTVVNGYCRFGELDKVWKLIEV---MKRKGLKPNSYIYGSIIGLLCRICKLA 776
Query: 210 MIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERD----VVAWSSLI 265
+E IR I P + + L++ + + G + AS FY M RD V+ ++++I
Sbjct: 777 EAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAII 836
Query: 266 SAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQDYGL 325
S + G+ A + FH M + PD +TF ++ AG DA M Q G
Sbjct: 837 SGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQ-AGC 895
Query: 326 QPSSDHYSCLVDVLSRAGRLYEAYDIIRGM 355
P+ Y+ L+D L + G L A +++ M
Sbjct: 896 SPNVVTYTTLIDGLCKEGDLDSANELLHEM 925
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 114/286 (39%), Gaps = 15/286 (5%)
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRN----VVVWNAMISLYTHS 137
S I+ G L + V L+D + K +A K F E+ R+ V+ + A+IS +
Sbjct: 783 SEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQI 842
Query: 138 NCVSDALYMFDAMH---VAPDASTFNAIIAGLAGTEDGSAK-AIAFYWRMRELSLKPNLI 193
+ +A +F M + PD+ TF +I G G K A + M + PN++
Sbjct: 843 GDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKA--GHMKDAFRVHNHMIQAGCSPNVV 900
Query: 194 TLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNM 253
T L+ + L+ E+ + + P+ + +V + G + A +
Sbjct: 901 TYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF 960
Query: 254 K----ERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLA 309
+ D V +++L+ AY GE A E M + P +TF ++ G+
Sbjct: 961 EAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGML 1020
Query: 310 DDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGM 355
+D M G+ P++ ++ LV L A I + M
Sbjct: 1021 EDGEKLLNWMLAK-GIAPNATTFNSLVKQYCIRNNLKAATAIYKDM 1065
>AT1G05670.1 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transferase
family protein | chr1:1698574-1702715 REVERSE
Length = 1184
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 117/270 (43%), Gaps = 17/270 (6%)
Query: 99 LVDMYGKCVSTFSARKLFDEIPQR----NVVVWNAMISLYTHSNCVSDALYMFDAMHV-- 152
L + C T +A +F E P+ NV +N +I + +A ++ M +
Sbjct: 660 LTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKG 719
Query: 153 -APDASTFNAIIAGLA--GTEDGSAKAIAFYWRMRELSLKPNLITLLALLRACVRMTSLN 209
PD +++ ++ G G D K I M+ LKPN +++ R+ L
Sbjct: 720 YTPDVISYSTVVNGYCRFGELDKVWKLIEV---MKRKGLKPNSYIYGSIIGLLCRICKLA 776
Query: 210 MIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERD----VVAWSSLI 265
+E IR I P + + L++ + + G + AS FY M RD V+ ++++I
Sbjct: 777 EAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAII 836
Query: 266 SAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQDYGL 325
S + G+ A + FH M + PD +TF ++ AG DA M Q G
Sbjct: 837 SGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQ-AGC 895
Query: 326 QPSSDHYSCLVDVLSRAGRLYEAYDIIRGM 355
P+ Y+ L+D L + G L A +++ M
Sbjct: 896 SPNVVTYTTLIDGLCKEGDLDSANELLHEM 925
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 114/286 (39%), Gaps = 15/286 (5%)
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRN----VVVWNAMISLYTHS 137
S I+ G L + V L+D + K +A K F E+ R+ V+ + A+IS +
Sbjct: 783 SEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQI 842
Query: 138 NCVSDALYMFDAMH---VAPDASTFNAIIAGLAGTEDGSAK-AIAFYWRMRELSLKPNLI 193
+ +A +F M + PD+ TF +I G G K A + M + PN++
Sbjct: 843 GDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKA--GHMKDAFRVHNHMIQAGCSPNVV 900
Query: 194 TLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNM 253
T L+ + L+ E+ + + P+ + +V + G + A +
Sbjct: 901 TYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF 960
Query: 254 K----ERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLA 309
+ D V +++L+ AY GE A E M + P +TF ++ G+
Sbjct: 961 EAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGML 1020
Query: 310 DDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGM 355
+D M G+ P++ ++ LV L A I + M
Sbjct: 1021 EDGEKLLNWMLAK-GIAPNATTFNSLVKQYCIRNNLKAATAIYKDM 1065
>AT1G73710.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:27721190-27724165 FORWARD
Length = 991
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 138/334 (41%), Gaps = 55/334 (16%)
Query: 98 ALVDMYGKCVSTFSARKLFDEIPQRNV----VVWNAMISLYTHSNCVSDALYMFDAMH-- 151
L+D+YGK A LF E+ + V V +N MI +S+A + M
Sbjct: 310 TLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEK 369
Query: 152 -VAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRA-CVRMTSLN 209
++PD T+N +++ A D A A+ +Y ++R++ L P+ +T A+L C R
Sbjct: 370 GISPDTKTYNILLSLHADAGDIEA-ALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAE 428
Query: 210 ---MIKEIHGCSIRNHIDPHP-------QLRSGLV------------------------- 234
+I E+ SIR ID H + GLV
Sbjct: 429 VEAVIAEMDRNSIR--IDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSSTTLAAVI 486
Query: 235 EAYGRCGCLINASNVFY---NM--KERDVVAWSSLISAYALHGEARSALETFHHMEMAKV 289
+ Y G + A VFY NM + DV+ ++ +I AY AL F M+
Sbjct: 487 DVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGT 546
Query: 290 LPDDITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAY 349
PD+ T+ ++ + + L D+A A M D G +P Y+ ++ R G L +A
Sbjct: 547 WPDECTYNSLFQMLAGVDLVDEAQRILAEM-LDSGCKPGCKTYAAMIASYVRLGLLSDAV 605
Query: 350 DIIRGMP---VKVTVKAWGALLGACRTYGEVELA 380
D+ M VK +G+L+ G VE A
Sbjct: 606 DLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEA 639
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 119/273 (43%), Gaps = 28/273 (10%)
Query: 63 LVLKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLF----DE 118
LV+++ + R QL + S ++ A++D+Y + A +F +
Sbjct: 460 LVVQAKALFERFQLDCVLSSTTL-----------AAVIDVYAEKGLWVEAETVFYGKRNM 508
Query: 119 IPQRN-VVVWNAMISLYTHSNCVSDALYMFDAMH---VAPDASTFNAIIAGLAGTE--DG 172
QRN V+ +N MI Y + AL +F M PD T+N++ LAG + D
Sbjct: 509 SGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDE 568
Query: 173 SAKAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSG 232
+ + +A M + KP T A++ + VR+ L+ +++ + + P+ +
Sbjct: 569 AQRILA---EMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGS 625
Query: 233 LVEAYGRCGCLINASNVFYNMKERDV----VAWSSLISAYALHGEARSALETFHHMEMAK 288
L+ + G + A F M+E V + +SLI AY+ G A + M+ ++
Sbjct: 626 LINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSE 685
Query: 289 VLPDDITFLAVLKACSHAGLADDALDYFARMQQ 321
PD ++L C+ G+ +A F +++
Sbjct: 686 GGPDVAASNSMLSLCADLGIVSEAESIFNALRE 718
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 104/230 (45%), Gaps = 9/230 (3%)
Query: 126 VWNAMISLYTHSNCVSDALYMFDAMH---VAPDASTFNAIIAGLAGTEDGSAK-AIAFYW 181
+ AMI+ Y +SDA+ +++AM V P+ + ++I G A E G + AI ++
Sbjct: 587 TYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFA--ESGMVEEAIQYFR 644
Query: 182 RMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCG 241
M E ++ N I L +L++A ++ L + ++ + P + ++ G
Sbjct: 645 MMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLG 704
Query: 242 CLINASNVFYNMKER---DVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLA 298
+ A ++F ++E+ DV+++++++ Y G A+E M + +L D +F
Sbjct: 705 IVSEAESIFNALREKGTCDVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQ 764
Query: 299 VLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEA 348
V+ + G + + F M + L + L +L + G EA
Sbjct: 765 VMACYAADGQLSECCELFHEMLVERKLLLDWGTFKTLFTLLKKGGVPSEA 814
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 72/151 (47%), Gaps = 8/151 (5%)
Query: 212 KEIHGCSIRNHIDPHPQLRSG---LVEAYGRCGCLINASNVFYNMKER----DVVAWSSL 264
K +H S + P+L S L++ YG+ G L +A+N+F M + D V ++++
Sbjct: 287 KSLHFASGSDSSPRKPRLTSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTM 346
Query: 265 ISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQDYG 324
I HG A ME + PD T+ +L + AG + AL+Y+ ++++ G
Sbjct: 347 IHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRK-VG 405
Query: 325 LQPSSDHYSCLVDVLSRAGRLYEAYDIIRGM 355
L P + + ++ +L + + E +I M
Sbjct: 406 LFPDTVTHRAVLHILCQRKMVAEVEAVIAEM 436
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD
Length = 952
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 115/238 (48%), Gaps = 17/238 (7%)
Query: 123 NVVVWNAMISLYTHSNCVSDALYMFDAMH---VAPDASTFNAIIAGLAGTEDGSAKAIAF 179
V +N +I+ + A+ + D M V+ + T+ I+ G A D + KA +
Sbjct: 623 TVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGD-TGKAFEY 681
Query: 180 YWRMRELSLKPNLITLLALLRACVR----MTSLNMIKEIHGCSIRNHIDPHPQLRSGLVE 235
+ R++ L ++ T ALL+AC + ++L + KE+ S RN I + + + L++
Sbjct: 682 FTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEM---SARN-IPRNSFVYNILID 737
Query: 236 AYGRCGCLINASNVFYNMKER----DVVAWSSLISAYALHGEARSALETFHHMEMAKVLP 291
+ R G + A+++ MK+ D+ ++S ISA + G+ A +T ME V P
Sbjct: 738 GWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKP 797
Query: 292 DDITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAY 349
+ T+ ++K + A L + AL + M+ G++P Y CL+ L + EAY
Sbjct: 798 NIKTYTTLIKGWARASLPEKALSCYEEMKA-MGIKPDKAVYHCLLTSLLSRASIAEAY 854
>AT5G64320.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:25723247-25725439 REVERSE
Length = 730
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 110/246 (44%), Gaps = 18/246 (7%)
Query: 123 NVVVWNAMISLYTHSNCVSDALYMFDAMHV---APDASTFNAIIAGLAGTEDGSAKAIAF 179
N V++ +I + N V++AL + + M + PDA TFN +I GL D +A
Sbjct: 251 NSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKF-DRINEAAKM 309
Query: 180 YWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLR--SGLVEAY 237
RM P+ IT L+ ++ ++ K++ + P P++ + L+ +
Sbjct: 310 VNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLF------YRIPKPEIVIFNTLIHGF 363
Query: 238 GRCGCLINASNVFYNMKER-----DVVAWSSLISAYALHGEARSALETFHHMEMAKVLPD 292
G L +A V +M DV ++SLI Y G ALE H M P+
Sbjct: 364 VTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPN 423
Query: 293 DITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDII 352
++ ++ G D+A + M D GL+P++ ++CL+ + R+ EA +I
Sbjct: 424 VYSYTILVDGFCKLGKIDEAYNVLNEMSAD-GLKPNTVGFNCLISAFCKEHRIPEAVEIF 482
Query: 353 RGMPVK 358
R MP K
Sbjct: 483 REMPRK 488
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/342 (21%), Positives = 138/342 (40%), Gaps = 59/342 (17%)
Query: 84 SIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSDA 143
I G+L N VD +A+ LF IP+ +V++N +I + + DA
Sbjct: 322 DITYGYLMNGLCKIGRVD---------AAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDA 372
Query: 144 LYMFDAM----HVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALL 199
+ M + PD T+N++I G E A+ MR KPN+ + L+
Sbjct: 373 KAVLSDMVTSYGIVPDVCTYNSLIYGYW-KEGLVGLALEVLHDMRNKGCKPNVYSYTILV 431
Query: 200 RACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKER--- 256
++ ++ + + + P+ + L+ A+ + + A +F M +
Sbjct: 432 DGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCK 491
Query: 257 ------------------------------------DVVAWSSLISAYALHGEARSALET 280
+ V +++LI+A+ GE + A +
Sbjct: 492 PDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKL 551
Query: 281 FHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLS 340
+ M D+IT+ +++K AG D A F +M +D G PS+ + L++ L
Sbjct: 552 VNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRD-GHAPSNISCNILINGLC 610
Query: 341 RAGRLYEAYDIIRGMPVKVT---VKAWGALL-GACRTYGEVE 378
R+G + EA + + M ++ + + + +L+ G CR G +E
Sbjct: 611 RSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRA-GRIE 651
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 121/276 (43%), Gaps = 21/276 (7%)
Query: 88 GFLSNPFVACALVDMYGKCVSTFSARKLFDEIP----QRNVVVWNAMISLYTHSNCVSDA 143
G N + LVD + K A + +E+ + N V +N +IS + + + +A
Sbjct: 419 GCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEA 478
Query: 144 LYMFDAMH---VAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMREL---SLKPNLITLLA 197
+ +F M PD TFN++I+GL ++ W +R++ + N +T
Sbjct: 479 VEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHA----LWLLRDMISEGVVANTVTYNT 534
Query: 198 LLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERD 257
L+ A +R + +++ + + L++ R G + A ++F M RD
Sbjct: 535 LINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKML-RD 593
Query: 258 VVAWSS-----LISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDA 312
A S+ LI+ G A+E M + PD +TF +++ AG +D
Sbjct: 594 GHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDG 653
Query: 313 LDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEA 348
L F ++Q + G+ P + ++ L+ L + G +Y+A
Sbjct: 654 LTMFRKLQAE-GIPPDTVTFNTLMSWLCKGGFVYDA 688
>AT3G23020.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:8177215-8179743 REVERSE
Length = 842
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/341 (21%), Positives = 143/341 (41%), Gaps = 43/341 (12%)
Query: 98 ALVDMYGKCVSTFSARKLF---DEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMH--- 151
A +D YG+ A ++F E+ +R V+ +N MI Y S A +F++M
Sbjct: 476 ANIDAYGERGYLSEAERVFICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYG 535
Query: 152 VAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMI 211
V PD T+N ++ LA + D K + +MRE + I A++ + V++ LNM
Sbjct: 536 VTPDKCTYNTLVQILA-SADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMA 594
Query: 212 KEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWSSLISAYALH 271
+E++ + +I+P DVV + LI+A+A
Sbjct: 595 EEVYKEMVEYNIEP-------------------------------DVVVYGVLINAFADT 623
Query: 272 GEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDH 331
G + A+ M+ A + + + + +++K + G D+A + ++ Q D
Sbjct: 624 GNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDV 683
Query: 332 YS--CLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGALLGAC--RTYGEVELAEIAGRAL 387
Y+ C++++ S + +A I M + + + C + G E A + +
Sbjct: 684 YTSNCMINLYSERSMVRKAEAIFDSMKQRGEANEFTFAMMLCMYKKNGRFEEATQIAKQM 743
Query: 388 FEIEP-DNPANYVLLARIYASMGRHGEAXXXXXXXXXXGVK 427
E++ +P +Y + ++A GR EA G++
Sbjct: 744 REMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQ 784
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 84/367 (22%), Positives = 147/367 (40%), Gaps = 55/367 (14%)
Query: 98 ALVDMYGKCVSTFSARKLFDEIPQRNVV----VWNAMISLYTHSNCVSDALYMFDAM--H 151
++D YGK A + F + + +V +N MI +Y ++ + + + M H
Sbjct: 303 TMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMKLH 362
Query: 152 VAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMI 211
APD T+N +I+ L + +A A++ M++ LKP+ ++ LL A + +M+
Sbjct: 363 CAPDTRTYNILIS-LHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYA---FSIRHMV 418
Query: 212 KEIHGC-----SIRNHIDPHPQLR--------------------------------SGLV 234
+E G ID + Q S +
Sbjct: 419 EEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYSANI 478
Query: 235 EAYGRCGCLINASNVFYNMKE---RDVVAWSSLISAYALHGEARSALETFHHMEMAKVLP 291
+AYG G L A VF +E R V+ ++ +I AY + A E F M V P
Sbjct: 479 DAYGERGYLSEAERVFICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTP 538
Query: 292 DDITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDI 351
D T+ +++ + A + Y +M++ G Y ++ + G+L A ++
Sbjct: 539 DKCTYNTLVQILASADMPHKGRCYLEKMRET-GYVSDCIPYCAVISSFVKLGQLNMAEEV 597
Query: 352 IRGM---PVKVTVKAWGALLGACRTYGEVELAEIAGRALFEIE-PDNPANYVLLARIYAS 407
+ M ++ V +G L+ A G V+ A A+ E P N Y L ++Y
Sbjct: 598 YKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTK 657
Query: 408 MGRHGEA 414
+G EA
Sbjct: 658 VGYLDEA 664
>AT1G62670.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23204773-23206665 REVERSE
Length = 630
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 92/421 (21%), Positives = 174/421 (41%), Gaps = 56/421 (13%)
Query: 13 MSYSSNYLRLISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIH 72
M S + +I ++K L++ K + + +Q +L + + Y S+++
Sbjct: 72 MVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQ-NLGIPHNHYTYSILINCFCRRS 130
Query: 73 RSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEI----PQRNVVVWN 128
+ L A+ +K+G+ N +L++ Y A L D++ Q N V +N
Sbjct: 131 QLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFN 190
Query: 129 AMI-SLYTHSNCVSDALYMFDAM---HVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMR 184
+I L+ H N S+A+ + D M PD T+ ++ GL D + A +M
Sbjct: 191 TLIHGLFLH-NKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGD-TDLAFNLLNKME 248
Query: 185 ELSLKPNLITLLALLRACVRMT----SLNMIKEIHGCSIR-------------------- 220
+ L+P ++ ++ + +LN+ KE+ IR
Sbjct: 249 QGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWS 308
Query: 221 -----------NHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDV----VAWSSLI 265
I+P S L++A+ + G L+ A ++ M +R + V +SSLI
Sbjct: 309 DASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLI 368
Query: 266 SAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQDYGL 325
+ + +H A + F M PD +T+ ++K ++ ++ F M Q GL
Sbjct: 369 NGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQ-RGL 427
Query: 326 QPSSDHYSCLVDVLSRAGRLYEAYDIIRGM---PVKVTVKAWGALL-GACRTYGEVELAE 381
++ Y+ L+ L +AG A +I + M V + + LL G C+ G++E A
Sbjct: 428 VGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKN-GKLEKAM 486
Query: 382 I 382
+
Sbjct: 487 V 487
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 127/280 (45%), Gaps = 21/280 (7%)
Query: 92 NP--FVACALVDMYGKCVSTFSARKLFDEIPQR----NVVVWNAMISLYTHSNCVSDALY 145
NP F AL+D + K A KL+DE+ +R ++V ++++I+ + + + +A
Sbjct: 323 NPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQ 382
Query: 146 MFDAM---HVAPDASTFNAIIAGLAG---TEDGSAKAIAFYWRMRELSLKPNLITLLALL 199
MF+ M H PD T+N +I G E+G + + M + L N +T L+
Sbjct: 383 MFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEG----MEVFREMSQRGLVGNTVTYNILI 438
Query: 200 RACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMK----E 255
+ + +M +EI + + + P+ + L++ + G L A VF ++ E
Sbjct: 439 QGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 498
Query: 256 RDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDY 315
+ ++ +I G+ + F ++ + V PD + + ++ G ++A
Sbjct: 499 PTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADAL 558
Query: 316 FARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGM 355
F M++D G P+S Y+ L+ R G + ++I+ M
Sbjct: 559 FKEMKED-GTLPNSGCYNTLIRARLRDGDREASAELIKEM 597
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 135/299 (45%), Gaps = 23/299 (7%)
Query: 111 SARKLFDEIPQR----NVVVWNAMISLYTHSNCVSDALYMFDAM---HVAPDASTFNAII 163
A LF E+ + NVV ++++IS + SDA + M + PD TF+A+I
Sbjct: 274 DALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALI 333
Query: 164 AGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHI 223
E +A Y M + S+ P+++T +L+ L+ K++ + H
Sbjct: 334 DAFV-KEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHC 392
Query: 224 DPHPQLRSGLVEAYGRCGCLINASNVFYNMKER----DVVAWSSLISAYALHGEARSALE 279
P + L++ + + + VF M +R + V ++ LI G+ A E
Sbjct: 393 FPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQE 452
Query: 280 TFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVL 339
F M V P+ +T+ +L G + A+ F +Q+ ++P+ Y+ +++ +
Sbjct: 453 IFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS-KMEPTIYTYNIMIEGM 511
Query: 340 SRAGRLYEAYDIIRGMP---VKVTVKAWGALL-GACRTYGEVELAEIAGRALF-EIEPD 393
+AG++ + +D+ + VK V A+ ++ G CR G E A+ ALF E++ D
Sbjct: 512 CKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRK-GSKEEAD----ALFKEMKED 565
>AT3G13160.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4229994-4231178 REVERSE
Length = 394
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 130/274 (47%), Gaps = 44/274 (16%)
Query: 94 FVACALVDMYGKCVSTFSARKLFDEIPQRN----VVVWNAMISLYTHSNCVSDALYMFD- 148
FVA ++++YG+ +A+K+FDE+P+RN + +NA+++ +S +F
Sbjct: 108 FVA-RIINLYGRVGMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKE 166
Query: 149 ---AMHVAPDASTFNAIIAGLAGTEDGS-AKAIAFYWRMRELSLKPNLITLLALLRACVR 204
+ + PD +++N +I GL G GS +A+A + LKP+ IT LL
Sbjct: 167 LPGKLSIEPDVASYNTLIKGLCGK--GSFTEAVALIDEIENKGLKPDHITFNILL----- 219
Query: 205 MTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWSSL 264
H + + Q+ + +VE N+K RD+ ++++
Sbjct: 220 ----------HESYTKGKFEEGEQIWARMVEK---------------NVK-RDIRSYNAR 253
Query: 265 ISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQDYG 324
+ A+ ++ + F ++ ++ PD TF A++K G D+A+ ++ ++++ G
Sbjct: 254 LLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKN-G 312
Query: 325 LQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVK 358
+P ++ L+ + +AG L AY++ + + K
Sbjct: 313 CRPLKFVFNSLLPAICKAGDLESAYELCKEIFAK 346
>AT5G65560.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:26201012-26203759 REVERSE
Length = 915
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 79/373 (21%), Positives = 155/373 (41%), Gaps = 52/373 (13%)
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIP----QRNVVVWNAMISLYTHS 137
S ++ G + F +L+ Y + SA K+F+E+P +RN V + +I +
Sbjct: 242 SKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVA 301
Query: 138 NCVSDALYMFDAM---HVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLIT 194
+ +A+ +F M P T+ +I L G+E S +A+ M E +KPN+ T
Sbjct: 302 RRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKS-EALNLVKEMEETGIKPNIHT 360
Query: 195 LLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMK 254
L+ + +E+ G + + P+ + L+ Y + G + +A +V M+
Sbjct: 361 YTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELME 420
Query: 255 ER--------------------------------------DVVAWSSLISAYALHGEARS 276
R DVV ++SLI G S
Sbjct: 421 SRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDS 480
Query: 277 ALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLV 336
A M ++PD T+ +++ + + ++A D F ++Q G+ P+ Y+ L+
Sbjct: 481 AYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQK-GVNPNVVMYTALI 539
Query: 337 DVLSRAGRLYEAYDIIRGMPVKVTVK---AWGALLGACRTYGEVELAEIAGRALFEI--E 391
D +AG++ EA+ ++ M K + + AL+ G+++ A + + +I +
Sbjct: 540 DGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQ 599
Query: 392 PDNPANYVLLARI 404
P + +L+ R+
Sbjct: 600 PTVSTDTILIHRL 612
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/342 (23%), Positives = 140/342 (40%), Gaps = 33/342 (9%)
Query: 88 GFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQR----NVVVWNAMISLYTHSNCVSDA 143
G + + + +++D K A LFD + Q+ NVV++ A+I Y + V +A
Sbjct: 492 GLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEA 551
Query: 144 LYMFDAM---HVAPDASTFNAIIAGLAGTEDGSAK-AIAFYWRMRELSLKPNLITLLALL 199
M + M + P++ TFNA+I GL DG K A +M ++ L+P + T L+
Sbjct: 552 HLMLEKMLSKNCLPNSLTFNALIHGLCA--DGKLKEATLLEEKMVKIGLQPTVSTDTILI 609
Query: 200 RACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKER--- 256
++ + + + P + ++ Y R G L++A ++ M+E
Sbjct: 610 HRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVS 669
Query: 257 -DVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDY 315
D+ +SSLI Y G+ A + M P TFL+++K
Sbjct: 670 PDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHL------------ 717
Query: 316 FARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTVKAWGAL-LGACRTY 374
++ YG Q S+ C + + + E + + V K++ L LG C
Sbjct: 718 ---LEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEV- 773
Query: 375 GEVELAEIAGRALFEIEPDNPANYVL--LARIYASMGRHGEA 414
G + +AE + E +P+ V L + +H EA
Sbjct: 774 GNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEA 815
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/221 (20%), Positives = 97/221 (43%), Gaps = 9/221 (4%)
Query: 197 ALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKE- 255
LL + R ++ +K+++ + + + P+ + +V Y + G + A+ + E
Sbjct: 188 TLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEA 247
Query: 256 ---RDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDA 312
D ++SLI Y + SA + F+ M + +++ + ++ A D+A
Sbjct: 248 GLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEA 307
Query: 313 LDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMP---VKVTVKAWGALLG 369
+D F +M+ D P+ Y+ L+ L + R EA ++++ M +K + + L+
Sbjct: 308 MDLFVKMKDDECF-PTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLID 366
Query: 370 ACRTYGEVELA-EIAGRALFEIEPDNPANYVLLARIYASMG 409
+ + + E A E+ G+ L + N Y L Y G
Sbjct: 367 SLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRG 407
>AT5G42310.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:16915860-16918238 FORWARD
Length = 709
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 125/298 (41%), Gaps = 26/298 (8%)
Query: 109 TFSARKLFDEIPQRNVV----VWNAMISLYTHSNCVSDALYMFDAMH---VAPDASTFNA 161
T A LF+E+ Q + +NA++ Y + + DA M M V+PD T++
Sbjct: 320 TLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSL 379
Query: 162 IIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRACVR-----MTSLNMIKEIHG 216
+I + I M ++PN LL A R + ++KE+
Sbjct: 380 LIDAYVNAGRWESARIVLK-EMEAGDVQPNSFVFSRLL-AGFRDRGEWQKTFQVLKEMKS 437
Query: 217 CSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMK----ERDVVAWSSLISAYALHG 272
++ P Q + +++ +G+ CL +A F M E D V W++LI + HG
Sbjct: 438 IGVK----PDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHG 493
Query: 273 EARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHY 332
A E F ME LP T+ ++ + DD +M+ G+ P+ +
Sbjct: 494 RHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQ-GILPNVVTH 552
Query: 333 SCLVDVLSRAGRLYEAYDIIRGMP---VKVTVKAWGALLGACRTYGEVELAEIAGRAL 387
+ LVDV ++GR +A + + M +K + + AL+ A G E A A R +
Sbjct: 553 TTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVM 610
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 91/221 (41%), Gaps = 9/221 (4%)
Query: 23 ISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIHS 82
++W ++ H K G H A +F ++ L ++++ S R +
Sbjct: 480 VTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPC-ATTYNIMINSYGDQERWDDMKRLLG 538
Query: 83 HSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIP----QRNVVVWNAMISLYTHSN 138
G L N LVD+YGK A + +E+ + + ++NA+I+ Y
Sbjct: 539 KMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRG 598
Query: 139 CVSDALYMFDAMH---VAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITL 195
A+ F M + P N++I G + A+A A M+E +KP+++T
Sbjct: 599 LSEQAVNAFRVMTSDGLKPSLLALNSLINAF-GEDRRDAEAFAVLQYMKENGVKPDVVTY 657
Query: 196 LALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEA 236
L++A +R+ + ++ I + P + RS L A
Sbjct: 658 TTLMKALIRVDKFQKVPVVYEEMIMSGCKPDRKARSMLRSA 698
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 100/226 (44%), Gaps = 34/226 (15%)
Query: 99 LVDMYGK------CVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMH- 151
++D +GK ++TF ++ E + + V WN +I + A MF+AM
Sbjct: 450 VIDTFGKFNCLDHAMTTFD--RMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMER 507
Query: 152 --VAPDASTFNAIIAGLAGTE--DGSAKAIAFYWRMRELSLKPNLITLLALLRACVRMTS 207
P A+T+N +I E D + + +M+ + PN++T L+ +
Sbjct: 508 RGCLPCATTYNIMINSYGDQERWDDMKRLLG---KMKSQGILPNVVTHTTLVDVYGKSGR 564
Query: 208 LN----MIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMK----ERDVV 259
N ++E+ ++ P + + L+ AY + G A N F M + ++
Sbjct: 565 FNDAIECLEEMKSVGLK----PSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLL 620
Query: 260 AWSSLISAYALHGEARSALETF---HHMEMAKVLPDDITFLAVLKA 302
A +SLI+A+ GE R E F +M+ V PD +T+ ++KA
Sbjct: 621 ALNSLINAF---GEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKA 663
>AT4G31850.1 | Symbols: PGR3 | PGR3 (PROTON GRADIENT REGULATION 3) |
chr4:15403020-15406358 FORWARD
Length = 1112
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 127/272 (46%), Gaps = 16/272 (5%)
Query: 151 HVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNM 210
HV PD TF ++ L + +A MR+ + PNL T L+ +R+ L+
Sbjct: 359 HV-PDVVTFTILVDALCKAGN-FGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDD 416
Query: 211 IKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKER----DVVAWSSLIS 266
E+ G + P ++ YG+ G ++A F MK + ++VA ++ +
Sbjct: 417 ALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLY 476
Query: 267 AYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQDYGLQ 326
+ A G R A + F+ ++ ++PD +T+ ++K S G D+A+ + M ++ G +
Sbjct: 477 SLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMEN-GCE 535
Query: 327 PSSDHYSCLVDVLSRAGRLYEAYDI---IRGMPVKVTVKAWGALLGACRTYGEVELAEIA 383
P + L++ L +A R+ EA+ + ++ M +K TV + LL G+++ A
Sbjct: 536 PDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEA--- 592
Query: 384 GRALFE--IEPDNPANYVLLARIYASMGRHGE 413
LFE ++ P N + ++ + ++ E
Sbjct: 593 -IELFEGMVQKGCPPNTITFNTLFDCLCKNDE 623
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 55/114 (48%), Gaps = 4/114 (3%)
Query: 246 ASNVFYNMKER----DVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLK 301
A +VF +K DV ++ L+ AY G+ E + M + + IT V+
Sbjct: 804 AQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVIS 863
Query: 302 ACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGM 355
AG DDALD + + D P++ Y L+D LS++GRLYEA + GM
Sbjct: 864 GLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGM 917
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 96/236 (40%), Gaps = 36/236 (15%)
Query: 123 NVVVWNAMISLYTHSNCVSDALYMFDAMHVA---PDASTFNAIIAGLAGTEDGSAKAIAF 179
N +N +I L S ++A+ ++ M + P T+++++ GL D + +
Sbjct: 187 NAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDS-VMGL 245
Query: 180 YWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGR 239
M L LKPN+ T +R R +N EI ++ D
Sbjct: 246 LKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEI----LKRMDDEG------------- 288
Query: 240 CGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAV 299
CG DVV ++ LI A + A E F M+ + PD +T++ +
Sbjct: 289 CG--------------PDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITL 334
Query: 300 LKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGM 355
L S D +++ M++D G P ++ LVD L +AG EA+D + M
Sbjct: 335 LDRFSDNRDLDSVKQFWSEMEKD-GHVPDVVTFTILVDALCKAGNFGEAFDTLDVM 389
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 97/227 (42%), Gaps = 10/227 (4%)
Query: 125 VVWNAMISLYTHSNCVSDALYMFDAMH---VAPDASTFNAIIAGLAGTEDGSAKAIAFYW 181
V +N M+ Y+ + +A+ + M PD N++I L D +A +
Sbjct: 504 VTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKA-DRVDEAWKMFM 562
Query: 182 RMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCG 241
RM+E+ LKP ++T LL + + E+ ++ P+ + L + +
Sbjct: 563 RMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKND 622
Query: 242 CLINASNVFYNMKER----DVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFL 297
+ A + + M + DV ++++I +G+ + A+ FH M+ V PD +T
Sbjct: 623 EVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-VYPDFVTLC 681
Query: 298 AVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLV-DVLSRAG 343
+L A L +DA + QP++ + L+ +L+ AG
Sbjct: 682 TLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAG 728
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 120/271 (44%), Gaps = 17/271 (6%)
Query: 99 LVDMYGKCVSTFSARKLFDEIP----QRNVVVWNAMISLYTHSNCVSDALYMF-DAM--- 150
L+D YGK +L+ E+ + N + N +IS + V DAL ++ D M
Sbjct: 826 LLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDR 885
Query: 151 HVAPDASTFNAIIAGLAGTEDGSA-KAIAFYWRMRELSLKPNLITLLALLRACVRMTSLN 209
+P A T+ +I GL+ + G +A + M + +PN L+ + +
Sbjct: 886 DFSPTACTYGPLIDGLS--KSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEAD 943
Query: 210 MIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKER----DVVAWSSLI 265
+ ++ + P + S LV+ G + + F +KE DVV ++ +I
Sbjct: 944 AACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLII 1003
Query: 266 SAYALHGEARSALETFHHMEMAK-VLPDDITFLAVLKACSHAGLADDALDYFARMQQDYG 324
+ AL F+ M+ ++ + PD T+ +++ AG+ ++A + +Q+ G
Sbjct: 1004 NGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQR-AG 1062
Query: 325 LQPSSDHYSCLVDVLSRAGRLYEAYDIIRGM 355
L+P+ ++ L+ S +G+ AY + + M
Sbjct: 1063 LEPNVFTFNALIRGYSLSGKPEHAYAVYQTM 1093
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/252 (21%), Positives = 105/252 (41%), Gaps = 19/252 (7%)
Query: 112 ARKLFDEIP-----QRNVVVWNAMISLYTHSNCVS---DALYMFDAMHVAPDASTFNAII 163
AR LF++ Q + +N +I ++ + D + PD +T+N ++
Sbjct: 768 ARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLL 827
Query: 164 A--GLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRN 221
G +G D + Y M + N IT ++ V+ +++ +++ + +
Sbjct: 828 DAYGKSGKID---ELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSD 884
Query: 222 H-IDPHPQLRSGLVEAYGRCGCLINASNVFYNMKE----RDVVAWSSLISAYALHGEARS 276
P L++ + G L A +F M + + ++ LI+ + GEA +
Sbjct: 885 RDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADA 944
Query: 277 ALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLV 336
A F M V PD T+ ++ G D+ L YF +++ GL P Y+ ++
Sbjct: 945 ACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKES-GLNPDVVCYNLII 1003
Query: 337 DVLSRAGRLYEA 348
+ L ++ RL EA
Sbjct: 1004 NGLGKSHRLEEA 1015
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 95/226 (42%), Gaps = 9/226 (3%)
Query: 123 NVVVWNAMISLYTHSNCVSDALYMFDAMH---VAPDASTFNAIIAGLAGTEDGSAKAIAF 179
N+ +N +I + + DAL +F M V P A T+ I + D S A+
Sbjct: 397 NLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGD-SVSALET 455
Query: 180 YWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGR 239
+ +M+ + PN++ A L + + K+I + P + +++ Y +
Sbjct: 456 FEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSK 515
Query: 240 CGCLINA----SNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDIT 295
G + A S + N E DV+ +SLI+ A + F M+ K+ P +T
Sbjct: 516 VGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVT 575
Query: 296 FLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSR 341
+ +L G +A++ F M Q G P++ ++ L D L +
Sbjct: 576 YNTLLAGLGKNGKIQEAIELFEGMVQK-GCPPNTITFNTLFDCLCK 620
>AT1G63150.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23419399-23421288 FORWARD
Length = 629
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 124/272 (45%), Gaps = 14/272 (5%)
Query: 112 ARKLFDEIPQR----NVVVWNAMISLYTHSNCVSDALYMFDAM---HVAPDASTFNAIIA 164
A LF E+ + NVV +N++I+ + SDA + M + P+ TFNA+I
Sbjct: 277 AVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALID 336
Query: 165 GLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHID 224
E +A + M + S+ P+ IT L+ L+ K++ +
Sbjct: 337 AFF-KEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCL 395
Query: 225 PHPQLRSGLVEAYGRCGCLINASNVFYNMKER----DVVAWSSLISAYALHGEARSALET 280
P+ Q + L+ + +C + + +F M +R + V ++++I + G+ SA
Sbjct: 396 PNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMV 455
Query: 281 FHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLS 340
F M +V D +T+ +L G D AL F +Q+ ++ + Y+ +++ +
Sbjct: 456 FKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSE-MELNIFIYNTMIEGMC 514
Query: 341 RAGRLYEAYDIIRGMPVKVTVKAWGALL-GAC 371
+AG++ EA+D+ + +K V + ++ G C
Sbjct: 515 KAGKVGEAWDLFCSLSIKPDVVTYNTMISGLC 546
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 136/286 (47%), Gaps = 25/286 (8%)
Query: 121 QRNVVVWNAMISLYTHSNCVSDALYMFD---AMHVAPDASTFNAIIAGLAGTEDGSAKAI 177
+ ++V +++++ Y HS +SDA+ + D M PD TF +I GL + +++A+
Sbjct: 150 EPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLF-LHNKASEAV 208
Query: 178 AFYWRMRELSLKPNLITLLALLRA-CVRMT---SLNMIKEIHGCSIRNHIDPHPQLRSGL 233
A +M + +P+L+T ++ C R +LN++ ++ I+ ++ + + +
Sbjct: 209 ALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANV----VIFNTI 264
Query: 234 VEAYGRCGCLINASNVFYNMKER----DVVAWSSLISAYALHGEARSALETFHHMEMAKV 289
+++ + + A ++F M+ + +VV ++SLI+ +G A +M K+
Sbjct: 265 IDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKI 324
Query: 290 LPDDITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAY 349
P+ +TF A++ A G +A M Q + P + Y+ L++ RL EA
Sbjct: 325 NPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQ-RSIDPDTITYNLLINGFCMHNRLDEAK 383
Query: 350 DIIRGMPVK---VTVKAWGALL-GAC---RTYGEVEL-AEIAGRAL 387
+ + M K ++ + L+ G C R VEL E++ R L
Sbjct: 384 QMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGL 429
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 112/261 (42%), Gaps = 24/261 (9%)
Query: 92 NPFVAC--ALVDMYGKCVSTFSARKLFDEIPQRNV----VVWNAMISLYTHSNCVSDALY 145
NP V AL+D + K A KL +E+ QR++ + +N +I+ + N + +A
Sbjct: 325 NPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQ 384
Query: 146 MFDAM---HVAPDASTFNAIIAGLAG---TEDGSAKAIAFYWRMRELSLKPNLITLLALL 199
MF M P+ T+N +I G EDG + + M + L N +T ++
Sbjct: 385 MFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDG----VELFREMSQRGLVGNTVTYTTII 440
Query: 200 RACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMK----E 255
+ + + + + + N + S L+ G L A +F ++ E
Sbjct: 441 QGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEME 500
Query: 256 RDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDY 315
++ ++++I G+ A + F + + PD +T+ ++ L +A D
Sbjct: 501 LNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIK---PDVVTYNTMISGLCSKRLLQEADDL 557
Query: 316 FARMQQDYGLQPSSDHYSCLV 336
F +M++D G P+S Y+ L+
Sbjct: 558 FRKMKED-GTLPNSGTYNTLI 577
>AT1G03560.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:890428-892410 REVERSE
Length = 660
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 119/278 (42%), Gaps = 12/278 (4%)
Query: 113 RKLFDEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMH---VAPDASTFNAIIAGLAGT 169
RK+ + + + +N +++ + V A +F+ M + PD T+N +I G
Sbjct: 211 RKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKA 270
Query: 170 EDGSAKAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQL 229
+ KA+ M + + IT + +++AC + ++ I P
Sbjct: 271 GQ-TQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHA 329
Query: 230 RSGLVEAYGRCGCLINASNVFYNMKER----DVVAWSSLISAYALHGEARSALETFHHME 285
S ++ + G L VF NM + +V ++ LI YA G A+ H M
Sbjct: 330 FSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMI 389
Query: 286 MAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRL 345
PD +T+ V+ G ++ALDYF + D GL +S YS L+D L +AGR+
Sbjct: 390 DEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFD-GLAINSMFYSSLIDGLGKAGRV 448
Query: 346 YEAYDIIRGMPVKVTVK---AWGALLGACRTYGEVELA 380
EA + M K + + AL+ A + +V+ A
Sbjct: 449 DEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEA 486
>AT1G63080.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23388884-23390728 REVERSE
Length = 614
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 120/277 (43%), Gaps = 15/277 (5%)
Query: 92 NPFVAC--ALVDMYGKCVSTFSARKLFDEIPQR----NVVVWNAMISLYTHSNCVSDALY 145
NP V +L+D + K A KLFDE+ QR N+V +N++I+ + + + +A
Sbjct: 307 NPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQ 366
Query: 146 MFDAM---HVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRAC 202
+F M PD T+N +I G + + + M L N +T L+
Sbjct: 367 IFTLMVSKDCLPDVVTYNTLINGFCKAKK-VVDGMELFRDMSRRGLVGNTVTYTTLIHGF 425
Query: 203 VRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMK----ERDV 258
+ + + + + + + + P+ + L++ + G L A VF ++ E D+
Sbjct: 426 FQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDI 485
Query: 259 VAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFAR 318
++ + G+ + F + + V PD I + ++ GL ++A F +
Sbjct: 486 YTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIK 545
Query: 319 MQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGM 355
M++D G P S Y+ L+ R G + ++I+ M
Sbjct: 546 MKED-GPLPDSGTYNTLIRAHLRDGDKAASAELIKEM 581
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/300 (20%), Positives = 131/300 (43%), Gaps = 21/300 (7%)
Query: 111 SARKLFDEIPQR----NVVVWNAMISLYTHSNCVSDALYMFDAM---HVAPDASTFNAII 163
A LF E+ + +V ++++IS + SDA + M + P+ TFN++I
Sbjct: 258 DALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLI 317
Query: 164 AGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHI 223
A E +A + M + S+ PN++T +L+ L+ ++I +
Sbjct: 318 DAFA-KEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDC 376
Query: 224 DPHPQLRSGLVEAYGRCGCLINASNVFYNMKER----DVVAWSSLISAYALHGEARSALE 279
P + L+ + + +++ +F +M R + V +++LI + + +A
Sbjct: 377 LPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQM 436
Query: 280 TFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVL 339
F M V P+ +T+ +L G + A+ F +Q+ ++P Y+ + + +
Sbjct: 437 VFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKS-KMEPDIYTYNIMSEGM 495
Query: 340 SRAGRLYEAYDIIRGMP---VKVTVKAWGALL-GACRTYGEVELAEIAGRALFEIEPDNP 395
+AG++ + +D+ + VK V A+ ++ G C+ L E A +++ D P
Sbjct: 496 CKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKK----GLKEEAYTLFIKMKEDGP 551
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 105/265 (39%), Gaps = 39/265 (14%)
Query: 123 NVVVWNAMISLYTHSNCVSDALYMFDAMH---VAPDASTFNAIIAGLAGTEDGSAKAIAF 179
N+ +N MI+ + +S AL + M P T N+++ G S +A+A
Sbjct: 99 NLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRIS-EAVAL 157
Query: 180 YWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGR 239
+M E+ +P+ +T L +HG N LVE
Sbjct: 158 VDQMVEMGYQPDTVTFTTL---------------VHGLFQHNKASEA----VALVERMVV 198
Query: 240 CGCLINASNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAV 299
GC + D+V + ++I+ GE AL + ME K+ D + + V
Sbjct: 199 KGC------------QPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTV 246
Query: 300 LKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGM---P 356
+ + DDAL+ F M + G++P YS L+ L GR +A ++ M
Sbjct: 247 IDSLCKYRHVDDALNLFTEM-DNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERK 305
Query: 357 VKVTVKAWGALLGACRTYGEVELAE 381
+ V + +L+ A G++ AE
Sbjct: 306 INPNVVTFNSLIDAFAKEGKLIEAE 330
>AT1G12300.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:4184163-4186076 REVERSE
Length = 637
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/349 (21%), Positives = 151/349 (43%), Gaps = 30/349 (8%)
Query: 60 VLSLVLKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEI 119
VL+++ KS +L + +IK+ + + +D K S +A LF+E+
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSII----IDGLCKHGSLDNAFNLFNEM 289
Query: 120 PQR----NVVVWNAMISLYTHSNCVSDALYMFDAM---HVAPDASTFNAIIAGLAGTEDG 172
+ N++ +N +I + ++ D + M + P+ TF+ +I E
Sbjct: 290 EMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFV-KEGK 348
Query: 173 SAKAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSG 232
+A + M + P+ IT +L+ + L+ ++ + DP+ + +
Sbjct: 349 LREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNI 408
Query: 233 LVEAYGRCGCLINASNVFYNMKER----DVVAWSSLISAYALHGEARSALETFHHMEMAK 288
L+ Y + + + +F M R D V +++LI + G+ A E F M K
Sbjct: 409 LINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRK 468
Query: 289 VLPDDITFLAVLKACSHAGLADDALDYF-----ARMQQDYGLQPSSDHYSCLVDVLSRAG 343
V P+ +T+ +L G ++ AL+ F ++M+ D G+ Y+ ++ + A
Sbjct: 469 VPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGI------YNIIIHGMCNAS 522
Query: 344 RLYEAYDIIRGMP---VKVTVKAWGALLGACRTYGEVELAEIAGRALFE 389
++ +A+D+ +P VK VK + ++G G + AE+ R + E
Sbjct: 523 KVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEE 571
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 97/212 (45%), Gaps = 18/212 (8%)
Query: 154 PDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRA-CV---RMTSLN 209
P+ TF+ +I GL E ++A+ RM E+ KP+LIT+ L+ C+ ++
Sbjct: 156 PNTITFSTLINGLC-LEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAML 214
Query: 210 MIKEI--HGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKER----DVVAWSS 263
+I ++ +GC P+ ++ + G A + M+ER D V +S
Sbjct: 215 LIDKMVEYGCQ------PNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSI 268
Query: 264 LISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQDY 323
+I HG +A F+ MEM + + IT+ ++ +AG DD M +
Sbjct: 269 IIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIK-R 327
Query: 324 GLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGM 355
+ P+ +S L+D + G+L EA ++ + M
Sbjct: 328 KINPNVVTFSVLIDSFVKEGKLREAEELHKEM 359
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE
Length = 590
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/351 (20%), Positives = 150/351 (42%), Gaps = 25/351 (7%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKS-CSAIHRSQ---LG 77
L+++ +N K+G AL + N ++ + D + + ++ C H L
Sbjct: 215 LVTYGAVINGLCKRGEPDLALNLLNKMEKG-KIEADVVIYNTIIDGLCKYKHMDDAFDLF 273
Query: 78 AAIHSHSIKMG-FLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNV----VVWNAMIS 132
+ + IK F NP ++C YG+ A +L ++ ++N+ V +NA+I
Sbjct: 274 NKMETKGIKPDVFTYNPLISCLC--NYGRWSD---ASRLLSDMLEKNINPDLVFFNALID 328
Query: 133 LYTHSNCVSDALYMFDAM----HVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSL 188
+ + +A ++D M H PD +N +I G + + + + M + L
Sbjct: 329 AFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKR-VEEGMEVFREMSQRGL 387
Query: 189 KPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASN 248
N +T L+ + + + + + + + P + L++ G + A
Sbjct: 388 VGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALV 447
Query: 249 VFYNMKERD----VVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACS 304
VF M++RD +V ++++I A G+ + F + + V P+ +T+ ++
Sbjct: 448 VFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFC 507
Query: 305 HAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGM 355
GL ++A F M++D G P+S Y+ L+ R G + ++I+ M
Sbjct: 508 RKGLKEEADALFVEMKED-GPLPNSGTYNTLIRARLRDGDEAASAELIKEM 557
>AT3G16710.1 | Symbols: | INVOLVED IN: biological_process unknown;
LOCATED IN: cellular_component unknown; EXPRESSED IN: 10
plant structures; EXPRESSED DURING: LP.10 ten leaves
visible, petal differentiation and expansion stage, D
bilateral stage, E expanded cotyledon stage; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT5G41170.1); Has 25882 Blast hits to 6002
proteins in 187 species: Archae - 3; Bacteria - 22;
Metazoa - 744; Fungi - 522; Plants - 23419; Viruses - 0;
Other Eukaryotes - 1172 (source: NCBI BLink). |
chr3:5690020-5691543 FORWARD
Length = 507
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 73/360 (20%), Positives = 154/360 (42%), Gaps = 20/360 (5%)
Query: 86 KMGFLSNPFVACAL-VDMYGKCVSTFSAR------KLFDEIPQRNVVVWNAMISLYTHSN 138
+M L P + C + M+ C+S+ R K+ + ++V + ++++ Y H N
Sbjct: 108 QMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWN 167
Query: 139 CVSDALYMFD---AMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITL 195
+ DA+ +FD M P+ T+ +I L + A+ + +M +PN++T
Sbjct: 168 RIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLN-HAVELFNQMGTNGSRPNVVTY 226
Query: 196 LALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKE 255
AL+ + + ++ I+P+ + L++A+ + G L+ A ++ M +
Sbjct: 227 NALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQ 286
Query: 256 R----DVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADD 311
DV + SLI+ ++G A + F+ ME P+++ + ++ + +D
Sbjct: 287 MSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVED 346
Query: 312 ALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVT---VKAWGALL 368
+ F M Q G+ ++ Y+ L+ GR A ++ M + ++ + LL
Sbjct: 347 GMKIFYEMSQK-GVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLL 405
Query: 369 GACRTYGEVELAEIAGRALFEIEPD-NPANYVLLARIYASMGRHGEAXXXXXXXXXXGVK 427
G+VE A + + + E D N Y ++ + +G+ +A G+K
Sbjct: 406 DGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMK 465
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 89/427 (20%), Positives = 166/427 (38%), Gaps = 90/427 (21%)
Query: 13 MSYSSNYLRLISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSL-VLKSCSAI 71
M +S +I +T+ L+ K + + +F +Q L + P + + ++ C +
Sbjct: 74 MVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQI---LGIPPLLCTCNIVMHCVCL 130
Query: 72 HRSQLGAAIH-SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIP----QRNVVV 126
A+ +K+GF + +L++ Y A LFD+I + NVV
Sbjct: 131 SSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVT 190
Query: 127 WNAMISLYTHSNCVSDALYMFDAMHV---APDASTFNAIIAGLAGTEDGSAKAIAFYWR- 182
+ +I + ++ A+ +F+ M P+ T+NA++ GL E G A+ R
Sbjct: 191 YTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLC--EIGRWGDAAWLLRD 248
Query: 183 MRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSI----------------------- 219
M + ++PN+IT AL+ A V++ L KE++ I
Sbjct: 249 MMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGL 308
Query: 220 ------------RNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVA----WSS 263
RN P+ + + L+ + + + + +FY M ++ VVA ++
Sbjct: 309 LDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTV 368
Query: 264 LISAYALHGEARSALETFHHMEMAKVLPD------------------------------- 292
LI Y L G A E F+ M + PD
Sbjct: 369 LIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKRE 428
Query: 293 -DI---TFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEA 348
DI T+ +++ G +DA D F + G++P+ Y+ ++ R G ++EA
Sbjct: 429 MDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSK-GMKPNVITYTTMISGFCRRGLIHEA 487
Query: 349 YDIIRGM 355
+ + M
Sbjct: 488 DSLFKKM 494
>AT1G62910.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23299060-23303162 FORWARD
Length = 1133
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 125/269 (46%), Gaps = 14/269 (5%)
Query: 121 QRNVVVWNAMISLYTHSNCVSDALYMFDAMH---VAPDASTFNAIIAGLAGTEDGSAKAI 177
+ +VV++N +I + DAL +F M + PD T++++I+ L S A
Sbjct: 255 EADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWS-DAS 313
Query: 178 AFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAY 237
M E + PN++T AL+ A V+ L ++++ I+ IDP S L+ +
Sbjct: 314 RLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 373
Query: 238 GRCGCLINASNVFYNMKERD----VVAWSSLISAYALHGEARSALETFHHMEMAKVLPDD 293
L A ++F M +D VV +S+LI + +E F M ++ +
Sbjct: 374 CMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNT 433
Query: 294 ITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEA---YD 350
+T+ ++ A D+A F +M G+ P+ Y+ L+D L + G+L +A ++
Sbjct: 434 VTYTTLIHGFFQARDCDNAQMVFKQMVS-VGVHPNILTYNILLDGLCKNGKLAKAMVVFE 492
Query: 351 IIRGMPVKVTVKAWGALL-GACRTYGEVE 378
++ ++ + + ++ G C+ G+VE
Sbjct: 493 YLQRSTMEPDIYTYNIMIEGMCKA-GKVE 520
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 107/235 (45%), Gaps = 9/235 (3%)
Query: 121 QRNVVVWNAMISLYTHSNCVSDALYMFDAMH---VAPDASTFNAIIAGLAGTEDGSAKAI 177
+ NVV+++ +I DAL +F M V P+ T++++I+ L S A
Sbjct: 855 EANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWS-DAS 913
Query: 178 AFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAY 237
M E + PNL+T AL+ A V+ L ++++ I+ IDP+ S L+ +
Sbjct: 914 RLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGF 973
Query: 238 GRCGCLINASNVFYNMKERD----VVAWSSLISAYALHGEARSALETFHHMEMAKVLPDD 293
L A + M +D VV +++LI+ + +E F M ++ +
Sbjct: 974 CMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNT 1033
Query: 294 ITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEA 348
+T+ ++ A D+A F +M G+ P+ Y+ L+D L + G+L +A
Sbjct: 1034 VTYTTLIHGFFQARDCDNAQMVFKQMVS-VGVHPNILTYNILLDGLCKNGKLAKA 1087
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/291 (20%), Positives = 119/291 (40%), Gaps = 13/291 (4%)
Query: 57 DPYVLSLVLKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLF 116
D LS +L R A+ ++MG+ + F L+ A L
Sbjct: 152 DIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALV 211
Query: 117 DEIPQR----NVVVWNAMISLYTHSNCVSDALYMFDAMH---VAPDASTFNAIIAGLAGT 169
D++ QR ++V + +++ + AL + M + D +N II GL
Sbjct: 212 DQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKY 271
Query: 170 EDGSAKAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQL 229
+ A+ + M ++P++ T +L+ + + I I+P+
Sbjct: 272 KHMD-DALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVT 330
Query: 230 RSGLVEAYGRCGCLINASNVFYNMKER----DVVAWSSLISAYALHGEARSALETFHHME 285
S L++A+ + G L+ A ++ M +R D+ +SSLI+ + +H A F M
Sbjct: 331 FSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 390
Query: 286 MAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLV 336
P+ +T+ ++K A ++ ++ F M Q GL ++ Y+ L+
Sbjct: 391 SKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQ-RGLVGNTVTYTTLI 440
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 110/266 (41%), Gaps = 39/266 (14%)
Query: 154 PDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKE 213
PD T N+++ G S A+A +M E+ KP+ +T L
Sbjct: 751 PDIVTLNSLLNGFCHGNRIS-DAVALVDQMVEMGYKPDTVTFTTL--------------- 794
Query: 214 IHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVAWSSLISAYALHGE 273
IHG + N L +V+ GC + D+V + ++++ G+
Sbjct: 795 IHGLFLHNKASEAVALIDRMVQR----GC------------QPDLVTYGAVVNGLCKRGD 838
Query: 274 ARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYS 333
AL + ME AK+ + + + V+ + DDAL+ F M ++ G++P+ YS
Sbjct: 839 TDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEM-ENKGVRPNVITYS 897
Query: 334 CLVDVLSRAGRLYEAYDIIRGM---PVKVTVKAWGALLGACRTYGEVELAEIAGRALFE- 389
L+ L GR +A ++ M + + + AL+ A G++ AE + +
Sbjct: 898 SLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKR 957
Query: 390 -IEPDNPANYVLLARIYASMGRHGEA 414
I+P N Y L + + R GEA
Sbjct: 958 SIDP-NIFTYSSLINGFCMLDRLGEA 982
>AT1G12700.1 | Symbols: | helicase domain-containing protein /
pentatricopeptide (PPR) repeat-containing protein |
chr1:4322913-4326197 REVERSE
Length = 828
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 127/296 (42%), Gaps = 22/296 (7%)
Query: 111 SARKLFDEIPQR----NVVVWNAMISLYTHSNCVSDALYMFDAM---HVAPDASTFNAII 163
+A LF E+ + +VV +N+++ + +D + M + P+ TFN ++
Sbjct: 236 AAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLL 295
Query: 164 AGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHI 223
E +A Y M + PN+IT L+ L+ + +RN
Sbjct: 296 DVFV-KEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKC 354
Query: 224 DPHPQLRSGLVEAYGRCGCLINASNVFYNMKERDVVA----WSSLISAYALHGEARSALE 279
P + L++ Y + + VF N+ +R +VA +S L+ + G+ + A E
Sbjct: 355 SPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEE 414
Query: 280 TFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQ---DYGLQPSSDHYSCLV 336
F M VLPD +T+ +L G + AL+ F +Q+ D G+ Y+ ++
Sbjct: 415 LFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIV----MYTTII 470
Query: 337 DVLSRAGRLYEAYDIIRGMP---VKVTVKAWGALLGACRTYGEVELAEIAGRALFE 389
+ + + G++ +A+++ +P VK V + ++ G + A I R + E
Sbjct: 471 EGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEE 526
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 99/207 (47%), Gaps = 14/207 (6%)
Query: 154 PDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRACVR----MTSLN 209
PD +TFN +I GL E ++A+ RM E +P+++T +++ R +L+
Sbjct: 146 PDTTTFNTLIKGLF-LEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALD 204
Query: 210 MIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKER----DVVAWSSLI 265
+++++ +++ + + S ++++ R GC+ A ++F M+ + VV ++SL+
Sbjct: 205 LLRKMEERNVKADVFTY----STIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLV 260
Query: 266 SAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQDYGL 325
G+ M +++P+ ITF +L G +A + + M G+
Sbjct: 261 RGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMIT-RGI 319
Query: 326 QPSSDHYSCLVDVLSRAGRLYEAYDII 352
P+ Y+ L+D RL EA +++
Sbjct: 320 SPNIITYNTLMDGYCMQNRLSEANNML 346
>AT5G61400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:24681550-24683514 FORWARD
Length = 654
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/331 (21%), Positives = 143/331 (43%), Gaps = 18/331 (5%)
Query: 34 KQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIHSHSIKMGFLSNP 93
KQG + + + + + TSL + + Y+ ++ + ++ + + K G L N
Sbjct: 211 KQGLYSKKEKLLDEM-TSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNL 269
Query: 94 FVACALVDMYGKCVSTFSARKLFDEI------PQRNVVVWNAMISLYTHSNCVSDALYMF 147
+ A++D Y K + A L+ EI P NVVV+ ++ + + + A +F
Sbjct: 270 YTYSAMIDGYCKTGNVRQAYGLYKEILVAELLP--NVVVFGTLVDGFCKARELVTARSLF 327
Query: 148 DAM---HVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRACVR 204
M V P+ +N +I G + + +A+ M L+L P++ T L+
Sbjct: 328 VHMVKFGVDPNLYVYNCLIHGHCKSGN-MLEAVGLLSEMESLNLSPDVFTYTILINGLCI 386
Query: 205 MTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMK----ERDVVA 260
+ + I P + L+ Y + + A ++ M E +++
Sbjct: 387 EDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIIT 446
Query: 261 WSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQ 320
+S+LI Y + ++A+ + M + ++PD +T+ A++ A +AL ++ M
Sbjct: 447 FSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDML 506
Query: 321 QDYGLQPSSDHYSCLVDVLSRAGRLYEAYDI 351
+ G+ P+ ++CLVD + GRL A D
Sbjct: 507 EA-GIHPNDHTFACLVDGFWKEGRLSVAIDF 536
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 130/275 (47%), Gaps = 21/275 (7%)
Query: 89 FLSNPFVACALVDMYGKCVSTFSARKLFDEIPQ----RNVVVWNAMISLYTHSNCVSDAL 144
L N V LVD + K +AR LF + + N+ V+N +I + S + +A+
Sbjct: 300 LLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAV 359
Query: 145 YMF---DAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRA 201
+ ++++++PD T+ +I GL ED A+A + +M+ + P+ T +L+
Sbjct: 360 GLLSEMESLNLSPDVFTYTILINGLC-IEDQVAEANRLFQKMKNERIFPSSATYNSLIHG 418
Query: 202 CVRMTSLNMIKEIHGCS--IRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKER--- 256
+ NM + + CS + ++P+ S L++ Y + A +++ M +
Sbjct: 419 YCK--EYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIV 476
Query: 257 -DVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDY 315
DVV +++LI A+ + AL + M A + P+D TF ++ G A+D+
Sbjct: 477 PDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDF 536
Query: 316 FARMQQDYGLQPSSDH--YSCLVDVLSRAGRLYEA 348
+ Q++ + +H ++CL++ L + G + A
Sbjct: 537 Y---QENNQQRSCWNHVGFTCLIEGLCQNGYILRA 568
>AT5G14770.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:4772881-4775697 REVERSE
Length = 938
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/317 (22%), Positives = 132/317 (41%), Gaps = 43/317 (13%)
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVS 141
S +KMG L + L+D + K + A+ L DEI + N++ ++S Y + + +
Sbjct: 185 SEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIE 244
Query: 142 DALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWR-MRELSLKPNLITLLALL- 199
+A PD TF++II L + G R M E+S+ PN +T L+
Sbjct: 245 EAYRDMVMSGFDPDVVTFSSIINRLC--KGGKVLEGGLLLREMEEMSVYPNHVTYTTLVD 302
Query: 200 ----------------RACVRMTSLNMI------------------KEIHGCSIRNHIDP 225
+ VR ++++ ++ + ++ P
Sbjct: 303 SLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVP 362
Query: 226 HPQLRSGLVEAYGRCGCLINASNVFYNMKER----DVVAWSSLISAYALHGEARSALETF 281
+ + LV+ + G L +A + M E+ +VV +SS+I+ Y G A+
Sbjct: 363 NVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLL 422
Query: 282 HHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSR 341
ME V+P+ T+ V+ AG + A++ M+ G++ ++ LV+ L R
Sbjct: 423 RKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRL-IGVEENNYILDALVNHLKR 481
Query: 342 AGRLYEAYDIIRGMPVK 358
GR+ E +++ M K
Sbjct: 482 IGRIKEVKGLVKDMVSK 498
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 125/292 (42%), Gaps = 21/292 (7%)
Query: 80 IHSHSIKMGFLSNPFVACALVDMYGKCVS-TFSARKLFDEIPQRNVVVWNAMIS-LYTHS 137
I+S I G + F L+ + K +F+ L + + + V +N +IS L H
Sbjct: 116 IYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAISLLRNRVISIDTVTYNTVISGLCEHG 175
Query: 138 NCVSDALYMFDA----MHVAPDASTFNAIIAGLAGTEDGSAKAIAFYWRMRELSLKPNLI 193
++D Y F + M + PD ++N +I G + +A A + EL NLI
Sbjct: 176 --LADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGN-FVRAKALVDEISEL----NLI 228
Query: 194 TLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNM 253
T LL + +L+ I+E + + + DP S ++ + G ++ + M
Sbjct: 229 THTILLSS---YYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREM 285
Query: 254 KERDV----VAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLA 309
+E V V +++L+ + R AL + M + + D + + ++ AG
Sbjct: 286 EEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDL 345
Query: 310 DDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMPVKVTV 361
+A F + +D + P+ Y+ LVD L +AG L A II M K +
Sbjct: 346 REAEKTFKMLLEDNQV-PNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVI 396
>AT4G11690.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:7056254-7057954 FORWARD
Length = 566
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/326 (21%), Positives = 136/326 (41%), Gaps = 17/326 (5%)
Query: 45 FNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYG 104
FN ++ + L D Y +++K C + + + GF N + L+D
Sbjct: 152 FNENKSKVVL--DVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCC 209
Query: 105 KCVSTFSARKLFDEIPQRNVV----VWNAMISLYTHSNCVSDALYMFDAMH---VAPDAS 157
K A+ LF E+ + +V + +I+ + M++ M V P+
Sbjct: 210 KKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLY 269
Query: 158 TFNAIIAGLAGTEDGSAK-AIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHG 216
T+N ++ L +DG K A + MRE + N++T L+ R LN ++
Sbjct: 270 TYNCVMNQLC--KDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVD 327
Query: 217 CSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKER----DVVAWSSLISAYALHG 272
+ I+P+ + L++ + G L A ++ ++K R +V ++ L+S + G
Sbjct: 328 QMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKG 387
Query: 273 EARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHY 332
+ A + ME + P +T+ ++ + + + A+ M++ GL P Y
Sbjct: 388 DTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEE-LGLVPDVHTY 446
Query: 333 SCLVDVLSRAGRLYEAYDIIRGMPVK 358
S L+ G++ EA + + M K
Sbjct: 447 SVLIHGFCIKGQMNEASRLFKSMVEK 472
>AT2G41720.2 | Symbols: EMB2654 | EMB2654 (EMBRYO DEFECTIVE 2654) |
chr2:17403861-17406648 REVERSE
Length = 683
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 130/280 (46%), Gaps = 14/280 (5%)
Query: 113 RKLFDEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMH---VAPDASTFNAIIAGLAGT 169
+K+ D ++V N ++S Y S AL F+ M V PD +TFN II L+
Sbjct: 105 KKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKL 164
Query: 170 EDGSAKAIAFYWRMRE--LSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHP 227
S++A+ + MRE +P+++T +++ + + + + + P+
Sbjct: 165 GQ-SSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNI 223
Query: 228 QLRSGLVEAYGRCGCLINASNVFYNMKER----DVVAWSSLISAYALHGEARSALETFHH 283
+ L+ AY G A +V ++K+ DVV+++ L+++Y + A E F
Sbjct: 224 VSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLM 283
Query: 284 MEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAG 343
M + P+ +T+ A++ A G +A++ F +M+QD G++P+ L+ SR+
Sbjct: 284 MRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQD-GIKPNVVSVCTLLAACSRSK 342
Query: 344 RLYEAYDII---RGMPVKVTVKAWGALLGACRTYGEVELA 380
+ ++ + + + A+ + +G+ E+E A
Sbjct: 343 KKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKA 382
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 75/337 (22%), Positives = 147/337 (43%), Gaps = 58/337 (17%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSL-VLKSCSAIH-RSQLGAA 79
++++T ++ + +G + VF + +A L P ++S L A+H S +
Sbjct: 188 VVTFTSIMHLYSVKGEIENCRAVF---EAMVAEGLKPNIVSYNALMGAYAVHGMSGTALS 244
Query: 80 IHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLF----DEIPQRNVVVWNAMISLYT 135
+ + G + + L++ YG+ A+++F E + NVV +NA+I Y
Sbjct: 245 VLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYG 304
Query: 136 HSNCVSDALYMFDAMH---VAPDASTFNAIIAGLAGTED--------------------- 171
+ +++A+ +F M + P+ + ++A + ++
Sbjct: 305 SNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTA 364
Query: 172 ------GS-------AKAIAFYWRMRELSLKPNLITLLALLRACVRMT----SLNMIKEI 214
GS KAIA Y MR+ +K + +T L+ RM+ +++ +KE+
Sbjct: 365 AYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEM 424
Query: 215 HGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMK----ERDVVAWSSLISAYAL 270
SI ++ S ++ AY + G + A ++F MK E DV+A++S++ AY
Sbjct: 425 EDLSI----PLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNA 480
Query: 271 HGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAG 307
+ A E F ME + PD I A+++A + G
Sbjct: 481 SEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGG 517
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 106/261 (40%), Gaps = 47/261 (18%)
Query: 126 VWNAMISLYTHSNCVSDALYMFDAMH---VAPDASTFNAIIAGLAGTEDGSAKAIAFYWR 182
++N MI L+ N V A +F M PDA T++A+I +A A WR
Sbjct: 13 IYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALI---------NAHGRAGQWR 63
Query: 183 MRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGC 242
++N++ ++ +R I P + L+ A G G
Sbjct: 64 W-----------------------AMNLMDDM----LRAAIAPSRSTYNNLINACGSSGN 96
Query: 243 LINASNVFYNMKER----DVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLA 298
A V M + D+V + ++SAY + AL F M+ AKV PD TF
Sbjct: 97 WREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNI 156
Query: 299 VLKACSHAGLADDALDYFARMQQDYG-LQPSSDHYSCLVDVLSRAGRLYEAYDIIRGM-- 355
++ S G + ALD F M++ +P ++ ++ + S G + + M
Sbjct: 157 IIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVA 216
Query: 356 -PVKVTVKAWGALLGACRTYG 375
+K + ++ AL+GA +G
Sbjct: 217 EGLKPNIVSYNALMGAYAVHG 237
>AT3G13150.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4227975-4229630 REVERSE
Length = 551
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 118/266 (44%), Gaps = 16/266 (6%)
Query: 102 MYGKCVSTFSARKLFDEIPQ----RNVVVWNAMISLYTHSNCVSDALYMF----DAMHVA 153
+YG A KLFDE+P+ R V +NA++S Y +S + +A+ F + + +
Sbjct: 131 LYGYSGMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGIT 190
Query: 154 PDASTFNAIIAGLAGTEDGSAKAI-AFYWRMRELSLKPNLITLLALLRACVRMTSLNMIK 212
PD T+N +I L GS I + + + + +P+LI+ LL R
Sbjct: 191 PDLVTYNTMIKALC--RKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGD 248
Query: 213 EIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKER----DVVAWSSLISAY 268
I ++ P+ + + V R +A N+ MK DV +++LI+AY
Sbjct: 249 RIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAY 308
Query: 269 ALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQDYGLQPS 328
+ ++ ++ M+ + PD +T+ ++ G D A++ + + L
Sbjct: 309 RVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVE-VSEEAIKHKLLSR 367
Query: 329 SDHYSCLVDVLSRAGRLYEAYDIIRG 354
+ Y +V+ L AG++ EA +++
Sbjct: 368 PNMYKPVVERLMGAGKIDEATQLVKN 393
>AT3G04760.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:1303884-1305692 REVERSE
Length = 602
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 104/249 (41%), Gaps = 9/249 (3%)
Query: 114 KLFDEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAM---HVAPDASTFNAIIAGLAGTE 170
+L + Q V+ + +I V +AL + D M + PD T+N II G+ E
Sbjct: 218 QLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMC-KE 276
Query: 171 DGSAKAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLR 230
+A + +P++I+ LLRA + +++ DP+
Sbjct: 277 GMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTY 336
Query: 231 SGLVEAYGRCGCLINASNVFYNMKER----DVVAWSSLISAYALHGEARSALETFHHMEM 286
S L+ R G + A N+ MKE+ D ++ LI+A+ G A+E M
Sbjct: 337 SILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMIS 396
Query: 287 AKVLPDDITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLY 346
LPD + + VL G AD AL+ F ++ + G P+S Y+ + L +G
Sbjct: 397 DGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGE-VGCSPNSSSYNTMFSALWSSGDKI 455
Query: 347 EAYDIIRGM 355
A +I M
Sbjct: 456 RALHMILEM 464
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 99/245 (40%), Gaps = 9/245 (3%)
Query: 114 KLFDEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMH---VAPDASTFNAIIAGLAGTE 170
K+F E NVV ++ +I+ + +A+ + M + PDA +++ +IA E
Sbjct: 323 KMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFC-RE 381
Query: 171 DGSAKAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLR 230
AI F M P+++ +L + + EI G P+
Sbjct: 382 GRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSY 441
Query: 231 SGLVEAYGRCGCLINASNVFYNMK----ERDVVAWSSLISAYALHGEARSALETFHHMEM 286
+ + A G I A ++ M + D + ++S+IS G A E M
Sbjct: 442 NTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRS 501
Query: 287 AKVLPDDITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLY 346
+ P +T+ VL A +DA++ M + G +P+ Y+ L++ + AG
Sbjct: 502 CEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGN-GCRPNETTYTVLIEGIGFAGYRA 560
Query: 347 EAYDI 351
EA ++
Sbjct: 561 EAMEL 565
>AT2G41720.1 | Symbols: EMB2654 | EMB2654 (EMBRYO DEFECTIVE 2654) |
chr2:17403744-17407127 REVERSE
Length = 822
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 130/280 (46%), Gaps = 14/280 (5%)
Query: 113 RKLFDEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMH---VAPDASTFNAIIAGLAGT 169
+K+ D ++V N ++S Y S AL F+ M V PD +TFN II L+
Sbjct: 237 KKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKL 296
Query: 170 EDGSAKAIAFYWRMRE--LSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHP 227
S++A+ + MRE +P+++T +++ + + + + + P+
Sbjct: 297 GQ-SSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNI 355
Query: 228 QLRSGLVEAYGRCGCLINASNVFYNMKER----DVVAWSSLISAYALHGEARSALETFHH 283
+ L+ AY G A +V ++K+ DVV+++ L+++Y + A E F
Sbjct: 356 VSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLM 415
Query: 284 MEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAG 343
M + P+ +T+ A++ A G +A++ F +M+QD G++P+ L+ SR+
Sbjct: 416 MRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQD-GIKPNVVSVCTLLAACSRSK 474
Query: 344 RLYEAYDII---RGMPVKVTVKAWGALLGACRTYGEVELA 380
+ ++ + + + A+ + +G+ E+E A
Sbjct: 475 KKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKA 514
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 75/337 (22%), Positives = 147/337 (43%), Gaps = 58/337 (17%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSL-VLKSCSAIH-RSQLGAA 79
++++T ++ + +G + VF + +A L P ++S L A+H S +
Sbjct: 320 VVTFTSIMHLYSVKGEIENCRAVF---EAMVAEGLKPNIVSYNALMGAYAVHGMSGTALS 376
Query: 80 IHSHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLF----DEIPQRNVVVWNAMISLYT 135
+ + G + + L++ YG+ A+++F E + NVV +NA+I Y
Sbjct: 377 VLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYG 436
Query: 136 HSNCVSDALYMFDAMH---VAPDASTFNAIIAGLAGTED--------------------- 171
+ +++A+ +F M + P+ + ++A + ++
Sbjct: 437 SNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTA 496
Query: 172 ------GS-------AKAIAFYWRMRELSLKPNLITLLALLRACVRMT----SLNMIKEI 214
GS KAIA Y MR+ +K + +T L+ RM+ +++ +KE+
Sbjct: 497 AYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEM 556
Query: 215 HGCSIRNHIDPHPQLRSGLVEAYGRCGCLINASNVFYNMK----ERDVVAWSSLISAYAL 270
SI ++ S ++ AY + G + A ++F MK E DV+A++S++ AY
Sbjct: 557 EDLSI----PLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNA 612
Query: 271 HGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAG 307
+ A E F ME + PD I A+++A + G
Sbjct: 613 SEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGG 649
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 114/281 (40%), Gaps = 48/281 (17%)
Query: 106 CVSTFSARKLFDEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMH---VAPDASTFNAI 162
CV+ F K+ RN + +N MI L+ N V A +F M PDA T++A+
Sbjct: 126 CVNVFKWMKIQKNYCARNDI-YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDAL 184
Query: 163 IAGLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNH 222
I +A A WR ++N++ ++ +R
Sbjct: 185 I---------NAHGRAGQWRW-----------------------AMNLMDDM----LRAA 208
Query: 223 IDPHPQLRSGLVEAYGRCGCLINASNVFYNMKER----DVVAWSSLISAYALHGEARSAL 278
I P + L+ A G G A V M + D+V + ++SAY + AL
Sbjct: 209 IAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKAL 268
Query: 279 ETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQDYG-LQPSSDHYSCLVD 337
F M+ AKV PD TF ++ S G + ALD F M++ +P ++ ++
Sbjct: 269 SYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMH 328
Query: 338 VLSRAGRLYEAYDIIRGM---PVKVTVKAWGALLGACRTYG 375
+ S G + + M +K + ++ AL+GA +G
Sbjct: 329 LYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHG 369
>AT1G64580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23985078-23988740 REVERSE
Length = 1052
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/343 (21%), Positives = 138/343 (40%), Gaps = 28/343 (8%)
Query: 22 LISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLGAAIH 81
++ + +N K AL VF ++ + D + ++ S R A +
Sbjct: 713 VVIYNTVINGLCKNRDLNNALEVFYCMEKK-GIRADAVTYNTLISGLSNSGRWTDAARLL 771
Query: 82 SHSIKMGFLSNPFVACALVDMYGKCVSTFSARKLFDEIPQR----NVVVWNAMISLYTHS 137
+K N AL+D + K + AR L+ E+ +R NV +N++I+ +
Sbjct: 772 RDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIH 831
Query: 138 NCVSDALYMFDAM---HVAPDASTFNAIIAGLAGT---EDGSAKAIAFYWRMRELSLKPN 191
C+ DA YMFD M PD T+N +I G + EDG + + M L +
Sbjct: 832 GCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDG----MKLFCEMTYQGLVGD 887
Query: 192 LITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCG----CLINAS 247
T L+ + LN+ +++ + + P + L++ G L+
Sbjct: 888 AFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVE 947
Query: 248 NVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHAG 307
++ + + D++ ++ +I + + A F + V PD I ++ ++ G
Sbjct: 948 DLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKG 1007
Query: 308 LADDALDYFARMQQDYGLQPSS--------DHYSCLVDVLSRA 342
L +A RM++D G PS DHY+ L L +A
Sbjct: 1008 LQREADKLCRRMKED-GFMPSERIYDETLRDHYTSLSAELIKA 1049
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 89/409 (21%), Positives = 169/409 (41%), Gaps = 64/409 (15%)
Query: 1 MFCEAKLNQLRIMSYSSNYLRLISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYV 60
+FCE + Q R + ++ R+++ ++N ++ H +L +S D Y
Sbjct: 595 LFCE--MLQSRPIPSIVDFTRVLTVIAKMNKF-------DIVIYLYHKMENLGISHDLYS 645
Query: 61 LSLVLKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVD------MYGKCVSTFSARK 114
++++ R L A+ +K+GF + +L++ + + VS +
Sbjct: 646 FTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMD 705
Query: 115 LFDEIPQRNVVVWNAMISLYTHSNCVSDALYMFDAMH---VAPDASTFNAIIAGLAGTED 171
F +P NVV++N +I+ + +++AL +F M + DA T+N +I+GL+ +
Sbjct: 706 GFGFVP--NVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGR 763
Query: 172 GSAKAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRS 231
+ A LLR +M+K IDP+ +
Sbjct: 764 WTDAA--------------------RLLR--------DMVKR--------KIDPNVIFFT 787
Query: 232 GLVEAYGRCGCLINASNVFYNMKERDVV----AWSSLISAYALHGEARSALETFHHMEMA 287
L++ + + G L+ A N++ M R VV ++SLI+ + +HG A F M
Sbjct: 788 ALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSK 847
Query: 288 KVLPDDITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYE 347
PD +T+ ++ + +D + F M GL + Y+ L+ +AG+L
Sbjct: 848 GCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQ-GLVGDAFTYNTLIHGYCQAGKLNV 906
Query: 348 AYDIIRGM---PVKVTVKAWGALLGACRTYGEVELAEIAGRALFEIEPD 393
A + M V + + LL G++E A + L + E D
Sbjct: 907 AQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMD 955
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/345 (20%), Positives = 144/345 (41%), Gaps = 55/345 (15%)
Query: 18 NYLRLISWTKQLNSHVKQGFHQQALVVFNHIQTSLALSLDPYVLSLVLKSCSAIHRSQLG 77
++ RL++ T L + + ++ F+ +S D Y ++++ R
Sbjct: 73 DFTRLLTATANLRRY-------ETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFA 125
Query: 78 AAIHSHSIKMGFLSNPFVACALVDMYGKCV-----STFSARKLFDEIP-QRNVVVWNAMI 131
++ +K+G+ P + ++G C+ FS L + + NVVV+N +I
Sbjct: 126 LSVLGKMMKLGY--EPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLI 183
Query: 132 SLYTHSNCVSDALYMFDAMH---VAPDASTFNAIIAGL--AGTEDGSAKAIAFYWRMREL 186
+ ++ AL + + M + D T+N ++ GL +G +A+ + M +
Sbjct: 184 DGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLR---DMMKR 240
Query: 187 SLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINA 246
S+ P+++T AL+ V+ +L+ +E++ I++ +DP+
Sbjct: 241 SINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPN-------------------- 280
Query: 247 SNVFYNMKERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKACSHA 306
NV YN S+I+ +HG A +TF M P+ +T+ ++
Sbjct: 281 -NVTYN----------SIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKF 329
Query: 307 GLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDI 351
+ D+ + F RM + G Y+ L+ + G+L A DI
Sbjct: 330 RMVDEGMKLFQRMSCE-GFNADIFTYNTLIHGYCQVGKLRVALDI 373
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 98/236 (41%), Gaps = 23/236 (9%)
Query: 134 YTHSNCVSDALYMFDAM-HVAPDAST--FNAIIAGLAGTEDGSAKAIAFYWRMRELSLKP 190
+ HS DA +F M H P S F ++ A I F +M +
Sbjct: 46 FLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYET-VIYFSQKMELYGISH 104
Query: 191 NLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCGCLINA---- 246
+L + L+ R + L+ + G ++ +P L+ + CL+N
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGF----CLVNRIGDA 160
Query: 247 -SNVFYNMK---ERDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFLAVLKA 302
S V +K E +VV +++LI +GE ALE + ME + D +T+ +L
Sbjct: 161 FSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTG 220
Query: 303 CSHAGLADDALDYFARMQQDY---GLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGM 355
++G DA ARM +D + P ++ L+DV + G L EA ++ + M
Sbjct: 221 LCYSGRWSDA----ARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEM 272
>AT1G18900.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:6529778-6532360 FORWARD
Length = 860
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 102/243 (41%), Gaps = 17/243 (6%)
Query: 179 FYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYG 238
FYW R+ K + T ++ R I ++ +R+ P+ + L+ +YG
Sbjct: 351 FYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYG 410
Query: 239 RCGCLINASNVFYNMKE----RDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDI 294
R L A NVF M+E D V + +LI +A G A++ + M+ + PD
Sbjct: 411 RANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTF 470
Query: 295 TFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRG 354
T+ ++ AG A F M D G P+ Y+ ++D+ ++A A + R
Sbjct: 471 TYSVIINCLGKAGHLPAAHKLFCEM-VDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRD 529
Query: 355 M------PVKVTVKAWGALLGACRTYGEVELAEIAGRALFEIE--PDNPANYVLLARIYA 406
M P KVT +LG C G +E AE + + PD P Y LL ++
Sbjct: 530 MQNAGFEPDKVTYSIVMEVLGHC---GYLEEAEAVFTEMQQKNWIPDEPV-YGLLVDLWG 585
Query: 407 SMG 409
G
Sbjct: 586 KAG 588
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 133/318 (41%), Gaps = 54/318 (16%)
Query: 51 SLALSLDPYVLSLVLKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTF 110
+L L +D Y + VLK + + + LG + + GF + +V G+
Sbjct: 324 NLGLRIDAYQANQVLKQMND-YGNALGF-FYWLKRQPGFKHDGHTYTTMVGNLGRAKQFG 381
Query: 111 SARKLFDEIP----QRNVVVWNAMISLYTHSNCVSDALYMFDAMHVA---PDASTFNAII 163
+ KL DE+ Q N V +N +I Y +N +++A+ +F+ M A PD T+ +I
Sbjct: 382 AINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLI 441
Query: 164 A--GLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRN 221
AG D A+ Y RM+ L P+ T
Sbjct: 442 DIHAKAGFLD---IAMDMYQRMQAGGLSPDTFTY-------------------------- 472
Query: 222 HIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKER----DVVAWSSLISAYALHGEARSA 277
S ++ G+ G L A +F M ++ ++V ++ ++ +A ++A
Sbjct: 473 ---------SVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNA 523
Query: 278 LETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVD 337
L+ + M+ A PD +T+ V++ H G ++A F MQQ + P Y LVD
Sbjct: 524 LKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWI-PDEPVYGLLVD 582
Query: 338 VLSRAGRLYEAYDIIRGM 355
+ +AG + +A+ + M
Sbjct: 583 LWGKAGNVEKAWQWYQAM 600
>AT1G18900.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:6529778-6532360 FORWARD
Length = 860
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 102/243 (41%), Gaps = 17/243 (6%)
Query: 179 FYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYG 238
FYW R+ K + T ++ R I ++ +R+ P+ + L+ +YG
Sbjct: 351 FYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYG 410
Query: 239 RCGCLINASNVFYNMKE----RDVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDI 294
R L A NVF M+E D V + +LI +A G A++ + M+ + PD
Sbjct: 411 RANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTF 470
Query: 295 TFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRG 354
T+ ++ AG A F M D G P+ Y+ ++D+ ++A A + R
Sbjct: 471 TYSVIINCLGKAGHLPAAHKLFCEM-VDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRD 529
Query: 355 M------PVKVTVKAWGALLGACRTYGEVELAEIAGRALFEIE--PDNPANYVLLARIYA 406
M P KVT +LG C G +E AE + + PD P Y LL ++
Sbjct: 530 MQNAGFEPDKVTYSIVMEVLGHC---GYLEEAEAVFTEMQQKNWIPDEPV-YGLLVDLWG 585
Query: 407 SMG 409
G
Sbjct: 586 KAG 588
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 133/318 (41%), Gaps = 54/318 (16%)
Query: 51 SLALSLDPYVLSLVLKSCSAIHRSQLGAAIHSHSIKMGFLSNPFVACALVDMYGKCVSTF 110
+L L +D Y + VLK + + + LG + + GF + +V G+
Sbjct: 324 NLGLRIDAYQANQVLKQMND-YGNALGF-FYWLKRQPGFKHDGHTYTTMVGNLGRAKQFG 381
Query: 111 SARKLFDEIP----QRNVVVWNAMISLYTHSNCVSDALYMFDAMHVA---PDASTFNAII 163
+ KL DE+ Q N V +N +I Y +N +++A+ +F+ M A PD T+ +I
Sbjct: 382 AINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLI 441
Query: 164 A--GLAGTEDGSAKAIAFYWRMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRN 221
AG D A+ Y RM+ L P+ T
Sbjct: 442 DIHAKAGFLD---IAMDMYQRMQAGGLSPDTFTY-------------------------- 472
Query: 222 HIDPHPQLRSGLVEAYGRCGCLINASNVFYNMKER----DVVAWSSLISAYALHGEARSA 277
S ++ G+ G L A +F M ++ ++V ++ ++ +A ++A
Sbjct: 473 ---------SVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNA 523
Query: 278 LETFHHMEMAKVLPDDITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVD 337
L+ + M+ A PD +T+ V++ H G ++A F MQQ + P Y LVD
Sbjct: 524 LKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWI-PDEPVYGLLVD 582
Query: 338 VLSRAGRLYEAYDIIRGM 355
+ +AG + +A+ + M
Sbjct: 583 LWGKAGNVEKAWQWYQAM 600
>AT1G09900.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3218133-3219929 FORWARD
Length = 598
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 101/239 (42%), Gaps = 43/239 (17%)
Query: 123 NVVVWNAMISLYTHSNCVSDALYMFDAMHVAPDASTFNAIIAGLAGTEDGSAK-AIAFYW 181
+V+ +N MIS Y + +++AL + D M V+PD T+N I+ L + G K A+
Sbjct: 171 DVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLC--DSGKLKQAMEVLD 228
Query: 182 RMRELSLKPNLITLLALLRACVRMTSLNMIKEIHGCSIRNHIDPHPQLRSGLVEAYGRCG 241
RM + P++IT L+ A R + +
Sbjct: 229 RMLQRDCYPDVITYTILIEATCRDSGVG-------------------------------- 256
Query: 242 CLINASNVFYNMKER----DVVAWSSLISAYALHGEARSALETFHHMEMAKVLPDDITFL 297
+A + M++R DVV ++ L++ G A++ + M + P+ IT
Sbjct: 257 ---HAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHN 313
Query: 298 AVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAYDIIRGMP 356
+L++ G DA A M + G PS ++ L++ L R G L A DI+ MP
Sbjct: 314 IILRSMCSTGRWMDAEKLLADMLRK-GFSPSVVTFNILINFLCRKGLLGRAIDILEKMP 371
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/257 (21%), Positives = 113/257 (43%), Gaps = 21/257 (8%)
Query: 123 NVVVWNAMISLYTHSNCVSDALYMFDAM---HVAPDASTFNAIIAGLAGTEDGSAKAIAF 179
+VV +N +I+ + A+ + + M P++ ++N ++ G E +AI +
Sbjct: 343 SVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFC-KEKKMDRAIEY 401
Query: 180 YWRMRELSLKPNLITLLALLRACVRMTSLNMIKEI------HGCSIRNHIDPHPQLRSGL 233
RM P+++T +L A + + EI GCS P + +
Sbjct: 402 LERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCS------PVLITYNTV 455
Query: 234 VEAYGRCGCLINASNVFYNMKERDV----VAWSSLISAYALHGEARSALETFHHMEMAKV 289
++ + G A + M+ +D+ + +SSL+ + G+ A++ FH E +
Sbjct: 456 IDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGI 515
Query: 290 LPDDITFLAVLKACSHAGLADDALDYFARMQQDYGLQPSSDHYSCLVDVLSRAGRLYEAY 349
P+ +TF +++ + D A+D+ M + G +P+ Y+ L++ L+ G EA
Sbjct: 516 RPNAVTFNSIMLGLCKSRQTDRAIDFLVFM-INRGCKPNETSYTILIEGLAYEGMAKEAL 574
Query: 350 DIIRGMPVKVTVKAWGA 366
+++ + K +K A
Sbjct: 575 ELLNELCNKGLMKKSSA 591