Jatropha Genome Database
- JcCA0312771.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0312771.10 + phase: 0 /pseudo
(737 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G06870.1 | Symbols: | signal peptidase, putative | chr1:2108... 385 e-107
AT2G30440.1 | Symbols: | chloroplast thylakoidal processing pep... 357 1e-98
AT1G47310.1 | Symbols: | unknown protein | chr1:17343082-173446... 254 2e-67
AT3G24590.1 | Symbols: PLSP1 | PLSP1 (plastidic type I signal pe... 228 1e-59
AT5G64510.1 | Symbols: | unknown protein | chr5:25784592-257861... 81 2e-15
AT1G23465.1 | Symbols: | signal peptidase-related | chr1:833005... 69 8e-12
AT1G29960.1 | Symbols: | peptidase/ serine-type peptidase | chr... 59 1e-08
AT1G53530.1 | Symbols: | signal peptidase I family protein | ch... 55 1e-07
AT1G53530.2 | Symbols: | signal peptidase I family protein | ch... 54 4e-07
AT3G08980.1 | Symbols: | signal peptidase I family protein | ch... 53 6e-07
>AT1G06870.1 | Symbols: | signal peptidase, putative |
chr1:2108832-2110642 FORWARD
Length = 367
Score = 385 bits (990), Expect = e-107, Method: Compositional matrix adjust.
Identities = 208/357 (58%), Positives = 248/357 (69%), Gaps = 23/357 (6%)
Query: 1 MAIRVTFTYSGYVAQNIAASAGIRVG--NCRSLHECWVRSRIFSSPTVQNTDYEPPATRT 58
MAIRVTFTYS YVA++IA+SAG RVG + RS E WVR R + + + P + T
Sbjct: 1 MAIRVTFTYSSYVARSIASSAGTRVGTGDVRSCFETWVRPRFCGHNQIPDIVDKSPGSNT 60
Query: 59 RDFQSDHRRXXXXXXXXXXXXXXMYSTIAGEIFGDNYKSSLTIGLISLMNSTAGVSNSSC 118
S R MYSTIA EI + KS L +G+ISLMN T S
Sbjct: 61 WGPSSGPR---------ARPASSMYSTIAREILEEGCKSPLVLGMISLMNLTGAPQFSGM 111
Query: 119 TGVLGISPFKAASILPFLQGSRWLPRSEPAP-GPKSSEIDKGGTVQCVRNESISNNTATV 177
TG LGISPFK +S++PFL+GS+W+P S PA +E+D+GG V C V
Sbjct: 112 TG-LGISPFKTSSVIPFLRGSKWMPCSIPATLSTDIAEVDRGGKV-C---------DPKV 160
Query: 178 TLEINGKEFDKSGGWLSRVLSFCSEDAKALFTAATVSFLFKSALAEPRSIPSTSMYPTLD 237
LE++ K + GW++++L+ CSEDAKA FTA TVS LF+SALAEP+SIPSTSM PTLD
Sbjct: 161 KLELSDKVSNGGNGWVNKLLNICSEDAKAAFTAVTVSLLFRSALAEPKSIPSTSMLPTLD 220
Query: 238 VGDRILAEKVSYIFRKPEVSDIVIFKAPPILQEIGYGSGDVFIKRIVATAGDIVEVCEGK 297
VGDR++AEKVSY FRKPEVSDIVIFKAPPIL E GY DVFIKRIVA+ GD VEVC+GK
Sbjct: 221 VGDRVIAEKVSYFFRKPEVSDIVIFKAPPILVEHGYSCADVFIKRIVASEGDWVEVCDGK 280
Query: 298 LYVNGVVQDEDFILEPLAYEMEPVLVPEGYVFVMGDNRNNSFDSHNWGPLPIQNIVG 354
L VN VQ EDF+LEP+ YEMEP+ VPEGYVFV+GDNRN SFDSHNWGPLPI+NI+G
Sbjct: 281 LLVNDTVQAEDFVLEPIDYEMEPMFVPEGYVFVLGDNRNKSFDSHNWGPLPIKNIIG 337
>AT2G30440.1 | Symbols: | chloroplast thylakoidal processing
peptidase | chr2:12973244-12975027 FORWARD
Length = 340
Score = 357 bits (917), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 196/357 (54%), Positives = 237/357 (66%), Gaps = 50/357 (14%)
Query: 1 MAIRVTFTYSGYVAQNIAASAGIRVGNCRSLHECWVRSRIFSSPTVQNTDYEPPATRTRD 60
MAIR+TFTYS +VA+N+ G RVG E VR R FS RD
Sbjct: 1 MAIRITFTYSTHVARNLV---GTRVGPGGYCFESLVRPRFFS--------------HKRD 43
Query: 61 FQSDHRRXXXXXXXXXXXXXXMYSTIAGEIFGDNYKSSLTIGLISLMNSTAGVSNSSCTG 120
F R MY +IA E+ G+ +S L +GLIS++ ST G SS
Sbjct: 44 FDRSPRNRPAS----------MYGSIARELIGEGSQSPLVMGLISILKSTTG-HESSTMN 92
Query: 121 VLGISPFKAASILPFLQGSRWLPRSEPAPGPKSSEIDKGGTVQCVRNESISNNTATVTLE 180
VLG+S FKA+SI+PFLQGS+W+ P ++DKGGTV ++ S N +
Sbjct: 93 VLGVSSFKASSIIPFLQGSKWIKNP-----PVIDDVDKGGTVCDDDDDKESRNGGS---- 143
Query: 181 INGKEFDKSGGWLSRVLSFCSEDAKALFTAATVSFLFKSALAEPRSIPSTSMYPTLDVGD 240
GW++++LS CSEDAKA FTA TVS LF+SALAEP+SIPSTSMYPTLD GD
Sbjct: 144 ----------GWVNKLLSVCSEDAKAAFTAVTVSILFRSALAEPKSIPSTSMYPTLDKGD 193
Query: 241 RILAEKVSYIFRKPEVSDIVIFKAPPIL---QEIGYGSGDVFIKRIVATAGDIVEVCEGK 297
R++AEKVSY FRKPEVSDIVIFKAPPIL E GY S DVFIKRIVA+ GD VEV +GK
Sbjct: 194 RVMAEKVSYFFRKPEVSDIVIFKAPPILLEYPEYGYSSNDVFIKRIVASEGDWVEVRDGK 253
Query: 298 LYVNGVVQDEDFILEPLAYEMEPVLVPEGYVFVMGDNRNNSFDSHNWGPLPIQNIVG 354
L+VN +VQ+EDF+LEP++YEMEP+ VP+GYVFV+GDNRN SFDSHNWGPLPI+NIVG
Sbjct: 254 LFVNDIVQEEDFVLEPMSYEMEPMFVPKGYVFVLGDNRNKSFDSHNWGPLPIENIVG 310
>AT1G47310.1 | Symbols: | unknown protein | chr1:17343082-17344618
FORWARD
Length = 395
Score = 254 bits (648), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 132/290 (45%), Positives = 192/290 (66%), Gaps = 5/290 (1%)
Query: 450 DFADFVAEIGSTALLDT-FKIEGPFDLRVGNQDELSLSLPLNASHTRLKRVLVGEGITVE 508
+ + V E+ S+ +LD ++GPF+L V D LSLSLP+N SH+ LKRVLV EGI+VE
Sbjct: 109 ELQELVREVNSSKVLDPPLVLKGPFELLVDGNDRLSLSLPMNISHSGLKRVLVSEGISVE 168
Query: 509 VKGSQELSLLHTVDHSFTVNGSFVISKRKTGFCAFWKPLCMPLHPIYVNGSASLIAYRTR 568
++ +Q +SL H+ + V K + +FW +C+PL PI + GSASL+A+RT
Sbjct: 169 IREAQAVSLFHSSHRRYAATVDPVNIKEGSSLWSFWGSVCVPLPPIQIIGSASLVAFRTS 228
Query: 569 NSEAPVETTLLSKGTIELLPAKCYTN-NAYKNHAQLNPSLSLKINRLGKLLRSFLSDTLR 627
N+ ++T+ LS I L KCY + Y+ H N L LKI++L K+L S L + R
Sbjct: 229 NATTQIKTSYLSDEAIHLYAEKCYYKAHTYRQHRFPNDLLGLKIHKLEKVLNS-LGNGTR 287
Query: 628 KSWNSGFLRTTVKASTIFRFQLDLEKNIGSNTTLDGLLEDWRTKPTVERVWFEIMARVEA 687
++ +S + +KAS + RFQL++E++IG N ++ WRTKP +ERVWFE+ A++E
Sbjct: 288 QTVSS--VTAKLKASGMVRFQLEIERSIGKNESVISKKVAWRTKPKIERVWFEVTAKIEG 345
Query: 688 GKLRLITAKKVRPFVQVDSASWSNLMSNISFTKFPSILVPPEALTLDVKW 737
KL+ + +KV PF++VD+ +WS+LMSN+SFTKFPS+LVP EALTLDVKW
Sbjct: 346 DKLKAVRLRKVVPFIEVDTEAWSSLMSNMSFTKFPSLLVPQEALTLDVKW 395
>AT3G24590.1 | Symbols: PLSP1 | PLSP1 (plastidic type I signal
peptidase 1); peptidase | chr3:8970694-8972020 FORWARD
Length = 291
Score = 228 bits (581), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 106/158 (67%), Positives = 125/158 (79%)
Query: 197 LSFCSEDAKALFTAATVSFLFKSALAEPRSIPSTSMYPTLDVGDRILAEKVSYIFRKPEV 256
L F S+DA+ +F A VS F+ +AEPR IPS SMYPT DVGDR++AEKVSY FRKP
Sbjct: 108 LDFTSDDAQTVFVAIAVSLAFRYFIAEPRYIPSLSMYPTFDVGDRLVAEKVSYYFRKPCA 167
Query: 257 SDIVIFKAPPILQEIGYGSGDVFIKRIVATAGDIVEVCEGKLYVNGVVQDEDFILEPLAY 316
+DIVIFK+PP+LQE+GY DVFIKRIVA GD+VEV GKL VNGV ++E FILEP Y
Sbjct: 168 NDIVIFKSPPVLQEVGYTDADVFIKRIVAKEGDLVEVHNGKLMVNGVARNEKFILEPPGY 227
Query: 317 EMEPVLVPEGYVFVMGDNRNNSFDSHNWGPLPIQNIVG 354
EM P+ VPE VFVMGDNRNNS+DSH WGPLP++NI+G
Sbjct: 228 EMTPIRVPENSVFVMGDNRNNSYDSHVWGPLPLKNIIG 265
>AT5G64510.1 | Symbols: | unknown protein | chr5:25784592-25786152
FORWARD
Length = 424
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 137/297 (46%), Gaps = 30/297 (10%)
Query: 463 LLDTFKIEGPFDLRVGNQDELSLSLPLNASHTRLKRVLVGEGITVEVKGSQELSLLHTVD 522
+L F++ GP +L + + + + LSLP + LK+V++ +G V VKG++ +SL H +D
Sbjct: 132 VLAPFQLSGPMELWIQDANNMRLSLPYDVDAGVLKKVILADGAVVTVKGARSVSLRHPID 191
Query: 523 HSFTVNGSFVISKRKTGFCAFWKPLCM-------PLHPIYVNGSASLIAYRTRNSEAPVE 575
+N S ++ +G + + L P+ + + G SL A +++ + ++
Sbjct: 192 LPLPLNQSS--NEFASGLLSLAEQLRRASTDQESPVLSLRIVGPTSL-ASTSQSPDNKLK 248
Query: 576 TTLLSKGTIEL------------LPAKCYTNN-AYKNHAQLNPSLSLK---INRLG--KL 617
L+ G +EL + A T + + P S+ N LG KL
Sbjct: 249 LKRLAPGLVELSSMSKDKRSLSTIGANAMTTVLTPREFTTMWPITSINGSNANLLGFEKL 308
Query: 618 LRSFLSDTLRKSWNSGFLRTTVKASTIFRFQLDLEKNIGSNTTLDGL-LEDWRTKPTVER 676
L S L ++ + L+ V A T + +EK + ++GL +WRTKP R
Sbjct: 309 LTSVLGPKAQEKGSFKVLKAKVAAQTFMKIGFGIEKKL-KEADVEGLSFPEWRTKPETMR 367
Query: 677 VWFEIMARVEAGKLRLITAKKVRPFVQVDSASWSNLMSNISFTKFPSILVPPEALTL 733
+ FE++A+V+ + +V P D+ + + + N++ +K P I PP TL
Sbjct: 368 MHFEVLAKVDGENVIPENVMRVDPIPLEDTIAQNVITGNVTMSKLPIIESPPSPFTL 424
>AT1G23465.1 | Symbols: | signal peptidase-related |
chr1:8330055-8330938 FORWARD
Length = 155
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 87/175 (49%), Gaps = 39/175 (22%)
Query: 184 KEFDKSGGWLSRVLSFCSEDAKALFTAATVSFLFKSALAEPRSIPSTSMYPTLD-VGDRI 242
+E KSG ++++V +C F T ++L A A SM PTL G+ +
Sbjct: 14 REAMKSGMFVAKV--YC-------FLHVTTNYLGFMAYAY-----GPSMIPTLHPSGNML 59
Query: 243 LAEKVSYIFRKPEVSDIVIFKAPPILQEIGYGSGDVFIKRIVATAGDIVEVCEGKLYVNG 302
LAE++S ++KP DIV+ ++P IKR+V GD +
Sbjct: 60 LAERISKRYQKPSRGDIVVIRSPE-------NPNKTPIKRVVGVEGDCIS---------- 102
Query: 303 VVQDEDFILEPL-AYEMEPVLVPEGYVFVMGDNRNNSFDSHNWGPLPIQNIVGSI 356
F+++P+ + E + ++VP+G+VFV GD +NS DS N+GP+P I G +
Sbjct: 103 ------FVIDPVKSDESQTIVVPKGHVFVQGDYTHNSRDSRNFGPVPYGLIQGRV 151
>AT1G29960.1 | Symbols: | peptidase/ serine-type peptidase |
chr1:10494813-10495851 FORWARD
Length = 169
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 81/174 (46%), Gaps = 37/174 (21%)
Query: 184 KEFDKSGGWLSRVLSFCSEDAKALFTAATVSFLFKSALAEPRSIPSTSMYPTLD-VGDRI 242
+E KSG L+++ +C F T ++L A A SM PTL G+ +
Sbjct: 14 REAMKSGVLLAKL--YC-------FLHVTTNYLGFMAYAY-----GPSMTPTLHPSGNVL 59
Query: 243 LAEKVSYIFRKPEVSDIVIFKAPPILQEIGYGSGDVFIKRIVATAGDIVEVCEGKLYVNG 302
LAE++S ++KP DIV+ ++P IKR++ GD + ++
Sbjct: 60 LAERISKRYQKPSRGDIVVIRSPE-------NPNKTPIKRVIGIEGDCIS-----FVIDS 107
Query: 303 VVQDEDFILEPLAYEMEPVLVPEGYVFVMGDNRNNSFDSHNWGPLPIQNIVGSI 356
DE + ++VP+G+VFV GD +NS DS N+G +P I G +
Sbjct: 108 RKSDES----------QTIVVPKGHVFVQGDYTHNSRDSRNFGTVPYGLIQGRV 151
>AT1G53530.1 | Symbols: | signal peptidase I family protein |
chr1:19978249-19979778 FORWARD
Length = 168
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 62/125 (49%), Gaps = 23/125 (18%)
Query: 231 SMYPTLDV-GDRILAEKVSYIFRKPEVSDIVIFKAPPILQEIGYGSGDVFIKRIVATAGD 289
SM PTL++ GD ILAE +S+ F K + D+V+ ++P + + KRI+ GD
Sbjct: 50 SMLPTLNLTGDVILAEHLSHRFGKIGLGDVVLVRSPRDPKRM-------VTKRILGLEGD 102
Query: 290 IVEVCEGKLYVNGVVQDEDFILEPLAYEMEPVLVPEGYVFVMGDNRNNSFDSHNWGPLPI 349
+ L + V VLVP+G+V++ GDN S DS ++GP+P
Sbjct: 103 RLTFSADPLVGDASVS---------------VLVPKGHVWIQGDNLYASTDSRHFGPVPY 147
Query: 350 QNIVG 354
I G
Sbjct: 148 SLIEG 152
>AT1G53530.2 | Symbols: | signal peptidase I family protein |
chr1:19978488-19979778 FORWARD
Length = 118
Score = 53.9 bits (128), Expect = 4e-07, Method: Composition-based stats.
Identities = 41/125 (32%), Positives = 63/125 (50%), Gaps = 25/125 (20%)
Query: 232 MYPTLDV-GDRILAEKVSYIFRKPEVSDIVIFKAPPILQEIGYGSGDVFIKRIVATAGDI 290
M PTL++ GD ILAE +S+ F K + D+V+ ++P + + KRI+ GD
Sbjct: 1 MLPTLNLTGDVILAEHLSHRFGKIGLGDVVLVRSPRDPKRM-------VTKRILGLEGDR 53
Query: 291 VEVCEGKLYVNGVVQDEDFILEPLAYEME-PVLVPEGYVFVMGDNRNNSFDSHNWGPLPI 349
+ F +PL + VLVP+G+V++ GDN S DS ++GP+P
Sbjct: 54 LT----------------FSADPLVGDASVSVLVPKGHVWIQGDNLYASTDSRHFGPVPY 97
Query: 350 QNIVG 354
I G
Sbjct: 98 SLIEG 102
>AT3G08980.1 | Symbols: | signal peptidase I family protein |
chr3:2741279-2742375 FORWARD
Length = 154
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 65/159 (40%), Gaps = 36/159 (22%)
Query: 204 AKALFTAATVSFLFKSALAEPRSIPSTSMYPTLD------VGDRILAEKVSYIFRKPEVS 257
AK FT + + + SM PT + + D +L +K K
Sbjct: 11 AKKSFTGSIIGLTISDRCCSVVPVRGDSMSPTFNPQRNSYLDDYVLVDKFCLKDYKFARG 70
Query: 258 DIVIFKAPPILQEIGYGSGDVFIKRIVATAGDIVEVCEGKLYVNGVVQDEDFILEPLAYE 317
D+V+F +P GD +IKRIV G E ++
Sbjct: 71 DVVVFSSPTHF-------GDRYIKRIVGMPG-----------------------EWISSS 100
Query: 318 MEPVLVPEGYVFVMGDNRNNSFDSHNWGPLPIQNIVGSI 356
+ + VPEG+ +V GDN+ +S DS ++GP+P+ I G +
Sbjct: 101 RDVIRVPEGHCWVEGDNKTSSLDSRSFGPIPLGLIQGRV 139