Jatropha Genome Database
- JcCA0312681.20
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0312681.20 - phase: 0
(241 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G03170.1 | Symbols: FLA11 | FLA11 | chr5:752898-753638 REVERSE 253 9e-68
AT5G60490.1 | Symbols: FLA12 | FLA12 | chr5:24325916-24326665 RE... 209 9e-55
AT1G03870.1 | Symbols: FLA9 | FLA9 (FASCICLIN-LIKE ARABINOOGALAC... 160 8e-40
AT5G44130.1 | Symbols: FLA13 | FLA13 (FASCICLIN-LIKE ARABINOGALA... 159 1e-39
AT2G20520.1 | Symbols: FLA6 | FLA6 (FASCICLIN-LIKE ARABINOGALACT... 156 1e-38
AT2G04780.2 | Symbols: FLA7 | FLA7 (FASCICLIN-LIKE ARABINOOGALAC... 93 2e-19
AT2G04780.1 | Symbols: FLA7 | FLA7 (FASCICLIN-LIKE ARABINOOGALAC... 93 2e-19
AT3G60900.1 | Symbols: FLA10 | FLA10 | chr3:22499573-22500841 RE... 92 4e-19
AT2G45470.1 | Symbols: FLA8, AGP8 | FLA8 (FASCICLIN-LIKE ARABINO... 88 5e-18
AT3G46550.1 | Symbols: SOS5 | SOS5 (salt overly sensitive 5); po... 72 4e-13
AT4G12730.1 | Symbols: FLA2 | FLA2 (FASCICLIN-LIKE ARABINOGALACT... 70 1e-12
AT5G55730.1 | Symbols: FLA1 | FLA1 (FASCICLIN-LIKE ARAB INOGALAC... 67 8e-12
>AT5G03170.1 | Symbols: FLA11 | FLA11 | chr5:752898-753638 REVERSE
Length = 246
Score = 253 bits (645), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 124/164 (75%), Positives = 144/164 (87%), Gaps = 1/164 (0%)
Query: 23 YAQNPSPAPSGPTNITAILEKAGQFTTFIKLMKSTQEADQINTQLNNSNQ-GLTVFAPPD 81
Y Q P+P PSGPTNITAILEKAGQFT FI+L+KSTQ +DQINTQLN+S+ GLTVFAP D
Sbjct: 23 YGQAPAPGPSGPTNITAILEKAGQFTLFIRLLKSTQASDQINTQLNSSSSNGLTVFAPTD 82
Query: 82 NAFANLKPGTLNSLTDQGKVQLVQFHILPSFIAMSQFQTVSNPLRTQAGNSANGEFPLNV 141
NAF +LK GTLNSL+DQ KVQLVQFH+LP+ I M QFQTVSNPLRTQAG+ NG+FPLN+
Sbjct: 83 NAFNSLKSGTLNSLSDQQKVQLVQFHVLPTLITMPQFQTVSNPLRTQAGDGQNGKFPLNI 142
Query: 142 TTSGNQVNVTTGVDTATVANTIYTDGSLAVYQVDQVLLPLDLFG 185
T+SGNQVN+TTGV +ATVAN++Y+D LAVYQVDQVLLPL +FG
Sbjct: 143 TSSGNQVNITTGVVSATVANSVYSDKQLAVYQVDQVLLPLAMFG 186
>AT5G60490.1 | Symbols: FLA12 | FLA12 | chr5:24325916-24326665
REVERSE
Length = 249
Score = 209 bits (533), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 97/150 (64%), Positives = 126/150 (84%)
Query: 35 TNITAILEKAGQFTTFIKLMKSTQEADQINTQLNNSNQGLTVFAPPDNAFANLKPGTLNS 94
TN+T ILEKAGQFT FI+L+KST A+Q+ QLNNS+ G+T+FAP D++F LK GTLNS
Sbjct: 38 TNVTKILEKAGQFTVFIRLLKSTGVANQLYGQLNNSDNGITIFAPSDSSFTGLKAGTLNS 97
Query: 95 LTDQGKVQLVQFHILPSFIAMSQFQTVSNPLRTQAGNSANGEFPLNVTTSGNQVNVTTGV 154
LTD+ +V+L+QFH++PS+++ S FQT+SNPLRTQAG+SA+G FPLNVTTSGN VN+T+GV
Sbjct: 98 LTDEQQVELIQFHVIPSYVSSSNFQTISNPLRTQAGDSADGHFPLNVTTSGNTVNITSGV 157
Query: 155 DTATVANTIYTDGSLAVYQVDQVLLPLDLF 184
TV+ +Y+DG LAVYQVD+VLLP +F
Sbjct: 158 TNTTVSGNVYSDGQLAVYQVDKVLLPQQVF 187
>AT1G03870.1 | Symbols: FLA9 | FLA9 (FASCICLIN-LIKE ARABINOOGALACTAN
9) | chr1:982625-983368 REVERSE
Length = 247
Score = 160 bits (404), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 78/150 (52%), Positives = 105/150 (70%)
Query: 36 NITAILEKAGQFTTFIKLMKSTQEADQINTQLNNSNQGLTVFAPPDNAFANLKPGTLNSL 95
N+TAILEK GQFTTFI L+ TQ Q+N Q+N+S++G+TVFAP DNAF NLKPGTLN L
Sbjct: 39 NLTAILEKGGQFTTFIHLLNITQVGSQVNIQVNSSSEGMTVFAPTDNAFQNLKPGTLNQL 98
Query: 96 TDQGKVQLVQFHILPSFIAMSQFQTVSNPLRTQAGNSANGEFPLNVTTSGNQVNVTTGVD 155
+ +V+L+ +H+ P + +M +VSNP+RTQA NG + LN T NQ+NV+TG
Sbjct: 99 SPDDQVKLILYHVSPKYYSMDDLLSVSNPVRTQASGRDNGVYGLNFTGQTNQINVSTGYV 158
Query: 156 TATVANTIYTDGSLAVYQVDQVLLPLDLFG 185
++N++ LAVY VD VLLP ++FG
Sbjct: 159 ETRISNSLRQQRPLAVYVVDMVLLPGEMFG 188
>AT5G44130.1 | Symbols: FLA13 | FLA13 (FASCICLIN-LIKE
ARABINOGALACTAN PROTEIN 13 PRECURSOR) |
chr5:17761128-17761871 FORWARD
Length = 247
Score = 159 bits (403), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 79/151 (52%), Positives = 106/151 (70%), Gaps = 1/151 (0%)
Query: 36 NITAILEKAGQFTTFIKLMKSTQEADQINTQLNNSNQGLTVFAPPDNAFANLKPGTLNSL 95
NITAILEK GQF T I+L+ +TQ +QIN Q+N+S++G+TV AP DNAF NLKPGTLN L
Sbjct: 36 NITAILEKGGQFVTLIRLLNTTQIGNQINIQINSSSEGMTVLAPTDNAFQNLKPGTLNKL 95
Query: 96 TDQGKVQLVQFHILPSFIAMSQFQTVSNPLRTQA-GNSANGEFPLNVTTSGNQVNVTTGV 154
+ +V+L+ +H+ P F + +VSNP+RTQA G G + LN T GNQVNV+TGV
Sbjct: 96 SPDDQVKLILYHVSPKFYTLEDLLSVSNPVRTQASGRDVGGVYGLNFTGQGNQVNVSTGV 155
Query: 155 DTATVANTIYTDGSLAVYQVDQVLLPLDLFG 185
++ ++ + LAVY VD VLLP ++FG
Sbjct: 156 VETRLSTSLRQERPLAVYVVDMVLLPEEMFG 186
>AT2G20520.1 | Symbols: FLA6 | FLA6 (FASCICLIN-LIKE ARABINOGALACTAN
6) | chr2:8840663-8841406 FORWARD
Length = 247
Score = 156 bits (394), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 85/167 (50%), Positives = 111/167 (66%), Gaps = 5/167 (2%)
Query: 24 AQNPSPAPS---GPTNITAILEKAGQFTTFIKLMKSTQEADQINTQLNNSNQGLTVFAPP 80
+Q +PAP+ P N+TAILE QFTT I+L+ +TQ Q++ QLN+S+QG+T+FAP
Sbjct: 23 SQPTAPAPTTEKSPINLTAILEAGHQFTTLIQLLNTTQVGFQVSVQLNSSDQGMTIFAPT 82
Query: 81 DNAFANLKPGTLNSLTDQGKVQLVQFHILPSFIAMSQFQTVSNPLRTQAGNSANGEFPLN 140
DNAF LKPGTLNSLT Q ++QL+ +HI+P + ++S SNP+RTQA G F LN
Sbjct: 83 DNAFNKLKPGTLNSLTYQQQIQLMLYHIIPKYYSLSDLLLASNPVRTQATGQDGGVFGLN 142
Query: 141 VT--TSGNQVNVTTGVDTATVANTIYTDGSLAVYQVDQVLLPLDLFG 185
T NQVNV+TGV + N + LAVY VD VLLP +LFG
Sbjct: 143 FTGQAQSNQVNVSTGVVETRINNALRQQFPLAVYVVDSVLLPEELFG 189
>AT2G04780.2 | Symbols: FLA7 | FLA7 (FASCICLIN-LIKE ARABINOOGALACTAN
7) | chr2:1677488-1678252 FORWARD
Length = 254
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 87/152 (57%), Gaps = 6/152 (3%)
Query: 36 NITAILEKAGQFTTFIKLMKSTQEADQINTQLNNSNQGLTVFAPPDNAFANLKPGTLNSL 95
N+T +L AG F TF+ + ST + Q NN+ +G+T+F P D+AF K L++L
Sbjct: 46 NLTELLSVAGPFHTFLDYLLSTGVIETFQNQANNTEEGITIFVPKDDAFKAQKNPPLSNL 105
Query: 96 TDQGKVQLVQFHILPSFIAMSQFQTVSN--PLRTQAGNSANGEFPLNVTTSGNQVNVTTG 153
T QLV FH LP + ++S+F+ +S P+ T AG G++ L T V + +
Sbjct: 106 TKDQLKQLVLFHALPHYYSLSEFKNLSQSGPVSTFAG----GQYSLKFTDVSGTVRIDSL 161
Query: 154 VDTATVANTIYTDGSLAVYQVDQVLLPLDLFG 185
V++++++ +AVYQV++VLLP +FG
Sbjct: 162 WTRTKVSSSVFSTDPVAVYQVNRVLLPEAIFG 193
>AT2G04780.1 | Symbols: FLA7 | FLA7 (FASCICLIN-LIKE ARABINOOGALACTAN
7) | chr2:1677488-1678252 FORWARD
Length = 254
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 87/152 (57%), Gaps = 6/152 (3%)
Query: 36 NITAILEKAGQFTTFIKLMKSTQEADQINTQLNNSNQGLTVFAPPDNAFANLKPGTLNSL 95
N+T +L AG F TF+ + ST + Q NN+ +G+T+F P D+AF K L++L
Sbjct: 46 NLTELLSVAGPFHTFLDYLLSTGVIETFQNQANNTEEGITIFVPKDDAFKAQKNPPLSNL 105
Query: 96 TDQGKVQLVQFHILPSFIAMSQFQTVSN--PLRTQAGNSANGEFPLNVTTSGNQVNVTTG 153
T QLV FH LP + ++S+F+ +S P+ T AG G++ L T V + +
Sbjct: 106 TKDQLKQLVLFHALPHYYSLSEFKNLSQSGPVSTFAG----GQYSLKFTDVSGTVRIDSL 161
Query: 154 VDTATVANTIYTDGSLAVYQVDQVLLPLDLFG 185
V++++++ +AVYQV++VLLP +FG
Sbjct: 162 WTRTKVSSSVFSTDPVAVYQVNRVLLPEAIFG 193
>AT3G60900.1 | Symbols: FLA10 | FLA10 | chr3:22499573-22500841
REVERSE
Length = 422
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 91/159 (57%), Gaps = 5/159 (3%)
Query: 27 PSPAPSGPTNITAILEKAGQFTTFIKLMKSTQEADQINTQLNNSNQGLTVFAPPDNAFAN 86
P+P+ +G +NIT +LEKAG TF L+ S+ I T + +GLTVFAP D AF
Sbjct: 181 PAPSSAGVSNITGLLEKAG-CKTFANLLVSS---GVIKTFESTVEKGLTVFAPSDEAFKA 236
Query: 87 LKPGTLNSLTDQGKVQLVQFHILPSFIAMSQFQTVSNPLRTQAGNSANGEFPLNVTTSGN 146
L +LT V L+++H L + +T + + T A N A G++ L +TSG+
Sbjct: 237 RGVPDLTNLTQAEVVSLLEYHALAEYKPKGSLKTNKDAISTLATNGA-GKYDLTTSTSGD 295
Query: 147 QVNVTTGVDTATVANTIYTDGSLAVYQVDQVLLPLDLFG 185
+V + TGV + +A+T+ + + ++ VD VLLP +LFG
Sbjct: 296 EVILHTGVGPSRLADTVVDETPVVIFTVDNVLLPAELFG 334
>AT2G45470.1 | Symbols: FLA8, AGP8 | FLA8 (FASCICLIN-LIKE
ARABINOGALACTAN PROTEIN 8) | chr2:18742797-18744059
REVERSE
Length = 420
Score = 87.8 bits (216), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/181 (35%), Positives = 93/181 (51%), Gaps = 6/181 (3%)
Query: 28 SPAPSGP-TNITAILEKAGQFTTFIKLMKSTQEADQINTQLNNSNQGLTVFAPPDNAFAN 86
+PAPS +NIT +LEKAG TF L+ S+ + T + +GLTVFAP D AF
Sbjct: 180 APAPSASLSNITGLLEKAG-CKTFANLLVSS---GVLKTYESAVEKGLTVFAPSDEAFKA 235
Query: 87 LKPGTLNSLTDQGKVQLVQFHILPSFIAMSQFQTVSNPLRTQAGNSANGEFPLNVTTSGN 146
L LT V L+++H L + +T N + T A N A G+F L +TSG+
Sbjct: 236 EGVPDLTKLTQAEVVSLLEYHALAEYKPKGSLKTNKNNISTLATNGA-GKFDLTTSTSGD 294
Query: 147 QVNVTTGVDTATVANTIYTDGSLAVYQVDQVLLPLDLFGXXXXXXXXXSKPDEDTPVKSP 206
+V + TGV + +A+T+ + ++ VD VLLP +LFG + P SP
Sbjct: 295 EVILHTGVAPSRLADTVLDATPVVIFTVDNVLLPAELFGKSKSPSPAPAPEPVTAPTPSP 354
Query: 207 A 207
A
Sbjct: 355 A 355
>AT3G46550.1 | Symbols: SOS5 | SOS5 (salt overly sensitive 5);
polysaccharide binding / protein binding |
chr3:17136612-17137874 REVERSE
Length = 420
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 87/163 (53%), Gaps = 11/163 (6%)
Query: 28 SPAPSGPTNITAILEKAGQFTTFIKLMKSTQEADQINTQLNNSNQG--LTVFAPPDNAFA 85
SP P+G N+T IL F + L+ A + T+ N +G +TVF P D+AF+
Sbjct: 200 SPPPAG-INLTQILINGHNFNVALSLLV----ASGVITEFENDERGAGITVFVPTDSAFS 254
Query: 86 NLKPGT-LNSLTDQGKVQLVQFHILPSFIAMSQFQTVSNPLRTQAGNS--ANGEFPLNVT 142
+L L SL + K +++FH+L S+ + ++++NP++ G + LN++
Sbjct: 255 DLPSNVNLQSLPAEQKAFVLKFHVLHSYYTLGSLESITNPVQPTLATEEMGAGSYTLNIS 314
Query: 143 -TSGNQVNVTTGVDTATVANTIYTDGSLAVYQVDQVLLPLDLF 184
+G+ V + +GV A V T + ++V+ V +VLLP +LF
Sbjct: 315 RVNGSIVTINSGVVLAVVTQTAFDQNPVSVFGVSKVLLPKELF 357
>AT4G12730.1 | Symbols: FLA2 | FLA2 (FASCICLIN-LIKE ARABINOGALACTAN
2) | chr4:7491598-7492809 REVERSE
Length = 403
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 83/161 (51%), Gaps = 7/161 (4%)
Query: 24 AQNPSPAPSGPTNITAILEKAGQFTTFIKLMKSTQEADQINTQLNNSNQGLTVFAPPDNA 83
A+ P+ +PS +T ILEK G F ++KST AD+ T + + GLTVF P D+A
Sbjct: 179 AEAPTASPSDLI-LTTILEKQG-CKAFSDILKSTG-ADK--TFQDTVDGGLTVFCPSDSA 233
Query: 84 FANLKPGTLNSLTDQGKVQLVQFHILPSFIAMSQFQTVSNPLRTQAGNSANGEFPLNVTT 143
P SL+ K LV +H +P + ++ ++ + + T A N +F V
Sbjct: 234 VGKFMP-KFKSLSPANKTALVLYHGMPVYQSLQMLRSGNGAVNTLA-TEGNNKFDFTVQN 291
Query: 144 SGNQVNVTTGVDTATVANTIYTDGSLAVYQVDQVLLPLDLF 184
G V + T V TA V T+ L VY++D+VLLP +++
Sbjct: 292 DGEDVTLETDVVTAKVMGTLKDQEPLIVYKIDKVLLPREIY 332
>AT5G55730.1 | Symbols: FLA1 | FLA1 (FASCICLIN-LIKE ARAB INOGALACTAN
1) | chr5:22558375-22560392 REVERSE
Length = 424
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 63/112 (56%), Gaps = 2/112 (1%)
Query: 73 GLTVFAPPDNAFANLKPGTLNSLTDQGKVQLVQFHILPSFIAMSQFQTVSNPLRTQAGNS 132
G+TVF P D+A P N LT K + F +P++ +M+ ++ + P+ T A +
Sbjct: 220 GMTVFCPGDDAMKGFLPKYKN-LTAPKKEAFLDFLAVPTYYSMAMLKSNNGPMNTLATDG 278
Query: 133 ANGEFPLNVTTSGNQVNVTTGVDTATVANTIYTDGSLAVYQVDQVLLPLDLF 184
AN +F L V G +V + T ++T + +T+ + LA+Y D+VLLP +LF
Sbjct: 279 AN-KFELTVQNDGEKVTLKTRINTVKIVDTLIDEQPLAIYATDKVLLPKELF 329