Jatropha Genome Database

JcCA0312671.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0312671.10 + phase: 1 /pseudo/partial
         (346 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G26910.1 | Symbols:  | 2-oxoacid dehydrogenase family protein...   211   8e-55
AT4G26910.2 | Symbols:  | 2-oxoacid dehydrogenase family protein...   210   9e-55
AT5G55070.1 | Symbols:  | 2-oxoacid dehydrogenase family protein...   206   2e-53
AT4G26910.3 | Symbols:  | 2-oxoacid dehydrogenase family protein...   188   4e-48
AT1G54220.2 | Symbols:  | dihydrolipoamide S-acetyltransferase, ...    57   1e-08
AT1G54220.1 | Symbols:  | dihydrolipoamide S-acetyltransferase, ...    57   1e-08
AT3G52200.1 | Symbols: LTA3 | LTA3; ATP binding / dihydrolipoyll...    53   3e-07
AT3G13930.1 | Symbols:  | dihydrolipoamide S-acetyltransferase, ...    52   5e-07

>AT4G26910.1 | Symbols:  | 2-oxoacid dehydrogenase family protein |
           chr4:13520127-13522889 REVERSE
          Length = 464

 Score =  211 bits (536), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 115/197 (58%), Positives = 139/197 (70%), Gaps = 6/197 (3%)

Query: 74  RSFSSDSGDLVDAVVPFMGESITDGTLAKFLKKPGDRVEVDEPIAQIETDKVTIDVASPE 133
           R FS+++GD V+AVVP MGESITDGTLA FLKKPG+RV+ DE IAQIETDKVTID+ASP 
Sbjct: 83  RPFSAETGDTVEAVVPHMGESITDGTLATFLKKPGERVQADEAIAQIETDKVTIDIASPA 142

Query: 134 AGTIQKLVAKEGETVEPGTKIAVISKSGXXXXXXXXXXXXXXXXXXXXXXXSGGKQTPAV 193
           +G IQ+ +  EG+TVEPGTK+A+ISKS                        +  KQ P V
Sbjct: 143 SGVIQEFLVNEGDTVEPGTKVAIISKSEDTASQVTPSQKIPETTDTKPSPPAEDKQKPRV 202

Query: 194 DSGPIKDSKRAPSAPQPPVKTPSSAPKPTEPQLPPKDRERRVPMTRLRKRVATRLKDSQN 253
           +S P+ +  +APS+       P       EPQLPPK+RERRVPMTRLRKRVATRLKDSQN
Sbjct: 203 ESAPVAEKPKAPSS------PPPPKQSAKEPQLPPKERERRVPMTRLRKRVATRLKDSQN 256

Query: 254 TFAMLTTFNEVDISVLI 270
           TFA+LTTFNEVD++ L+
Sbjct: 257 TFALLTTFNEVDMTNLM 273


>AT4G26910.2 | Symbols:  | 2-oxoacid dehydrogenase family protein |
           chr4:13520127-13522889 REVERSE
          Length = 463

 Score =  210 bits (535), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 115/197 (58%), Positives = 139/197 (70%), Gaps = 6/197 (3%)

Query: 74  RSFSSDSGDLVDAVVPFMGESITDGTLAKFLKKPGDRVEVDEPIAQIETDKVTIDVASPE 133
           R FS+++GD V+AVVP MGESITDGTLA FLKKPG+RV+ DE IAQIETDKVTID+ASP 
Sbjct: 82  RPFSAETGDTVEAVVPHMGESITDGTLATFLKKPGERVQADEAIAQIETDKVTIDIASPA 141

Query: 134 AGTIQKLVAKEGETVEPGTKIAVISKSGXXXXXXXXXXXXXXXXXXXXXXXSGGKQTPAV 193
           +G IQ+ +  EG+TVEPGTK+A+ISKS                        +  KQ P V
Sbjct: 142 SGVIQEFLVNEGDTVEPGTKVAIISKSEDTASQVTPSQKIPETTDTKPSPPAEDKQKPRV 201

Query: 194 DSGPIKDSKRAPSAPQPPVKTPSSAPKPTEPQLPPKDRERRVPMTRLRKRVATRLKDSQN 253
           +S P+ +  +APS+       P       EPQLPPK+RERRVPMTRLRKRVATRLKDSQN
Sbjct: 202 ESAPVAEKPKAPSS------PPPPKQSAKEPQLPPKERERRVPMTRLRKRVATRLKDSQN 255

Query: 254 TFAMLTTFNEVDISVLI 270
           TFA+LTTFNEVD++ L+
Sbjct: 256 TFALLTTFNEVDMTNLM 272


>AT5G55070.1 | Symbols:  | 2-oxoacid dehydrogenase family protein |
           chr5:22347637-22350409 FORWARD
          Length = 464

 Score =  206 bits (523), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 118/197 (59%), Positives = 136/197 (69%), Gaps = 7/197 (3%)

Query: 74  RSFSSDSGDLVDAVVPFMGESITDGTLAKFLKKPGDRVEVDEPIAQIETDKVTIDVASPE 133
           R FSSDSGD+V+AVVP MGESITDGTLA FLKKPGDRVE DE IAQIETDKVTID+ASP 
Sbjct: 84  RPFSSDSGDVVEAVVPHMGESITDGTLAAFLKKPGDRVEADEAIAQIETDKVTIDIASPA 143

Query: 134 AGTIQKLVAKEGETVEPGTKIAVISKSGXXXXXXXXXXXXXXXXXXXXXXXSGGKQTPAV 193
           +G IQ+ + KEG+TVEPG K+A IS S                        +   + P V
Sbjct: 144 SGVIQEFLVKEGDTVEPGNKVARISTSADAVSHVAPSEKAPEKPAPKPSPPA---EKPKV 200

Query: 194 DSGPIKDSKRAPSAPQPPVKTPSSAPKPTEPQLPPKDRERRVPMTRLRKRVATRLKDSQN 253
           +S  + +  +APS        P S     EPQLPPKDRERRVPMTRLRKRVATRLKDSQN
Sbjct: 201 ESTKVAEKPKAPSP----PPPPPSKQSAKEPQLPPKDRERRVPMTRLRKRVATRLKDSQN 256

Query: 254 TFAMLTTFNEVDISVLI 270
           TFA+LTTFNEVD++ L+
Sbjct: 257 TFALLTTFNEVDMTNLM 273


>AT4G26910.3 | Symbols:  | 2-oxoacid dehydrogenase family protein |
           chr4:13520127-13522055 REVERSE
          Length = 365

 Score =  188 bits (478), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 105/180 (58%), Positives = 125/180 (69%), Gaps = 6/180 (3%)

Query: 91  MGESITDGTLAKFLKKPGDRVEVDEPIAQIETDKVTIDVASPEAGTIQKLVAKEGETVEP 150
           MGESITDGTLA FLKKPG+RV+ DE IAQIETDKVTID+ASP +G IQ+ +  EG+TVEP
Sbjct: 1   MGESITDGTLATFLKKPGERVQADEAIAQIETDKVTIDIASPASGVIQEFLVNEGDTVEP 60

Query: 151 GTKIAVISKSGXXXXXXXXXXXXXXXXXXXXXXXSGGKQTPAVDSGPIKDSKRAPSAPQP 210
           GTK+A+ISKS                        +  KQ P V+S P+ +  +APS+   
Sbjct: 61  GTKVAIISKSEDTASQVTPSQKIPETTDTKPSPPAEDKQKPRVESAPVAEKPKAPSS--- 117

Query: 211 PVKTPSSAPKPTEPQLPPKDRERRVPMTRLRKRVATRLKDSQNTFAMLTTFNEVDISVLI 270
               P       EPQLPPK+RERRVPMTRLRKRVATRLKDSQNTFA+LTTFNEVD++ L+
Sbjct: 118 ---PPPPKQSAKEPQLPPKERERRVPMTRLRKRVATRLKDSQNTFALLTTFNEVDMTNLM 174


>AT1G54220.2 | Symbols:  | dihydrolipoamide S-acetyltransferase,
           putative | chr1:20246460-20250208 REVERSE
          Length = 539

 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 60/198 (30%), Positives = 93/198 (46%), Gaps = 44/198 (22%)

Query: 55  FLREITTLVQSEYLFGFKSRSFSSDSGDL---VDAVVPFMGESITDGTLAKFLKKPGDRV 111
           F +E + L+QS       +R FSS S DL    +  +P +  ++T+G +A++LKK GD+V
Sbjct: 88  FGKEFSCLMQS-------ARGFSSGS-DLPPHQEIGMPSLSPTMTEGNIARWLKKEGDKV 139

Query: 112 EVDEPIAQIETDKVTIDVASPEAGTIQKLVAKEG-ETVEPGTKIAVISKSGXXXXXXXXX 170
              E + ++ETDK T+++   E G + K+V  EG + ++ G  IA+  +           
Sbjct: 140 APGEVLCEVETDKATVEMECMEEGYLAKIVKAEGSKEIQVGEVIAITVEDEEDIGKFK-- 197

Query: 171 XXXXXXXXXXXXXXSGGKQTPA--VDSGPIKDSKRAPSAPQPP----VKTPSSAPKP--T 222
                              TP+   D+ P K    A   P PP    VK PSS P+P  +
Sbjct: 198 -----------------DYTPSSTADAAPTK----AEPTPAPPKEEKVKQPSSPPEPKAS 236

Query: 223 EPQLPPK-DRERRVPMTR 239
           +P  PP  DR    P+ R
Sbjct: 237 KPSTPPTGDRVFASPLAR 254


>AT1G54220.1 | Symbols:  | dihydrolipoamide S-acetyltransferase,
           putative | chr1:20246460-20250208 REVERSE
          Length = 539

 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 60/198 (30%), Positives = 93/198 (46%), Gaps = 44/198 (22%)

Query: 55  FLREITTLVQSEYLFGFKSRSFSSDSGDL---VDAVVPFMGESITDGTLAKFLKKPGDRV 111
           F +E + L+QS       +R FSS S DL    +  +P +  ++T+G +A++LKK GD+V
Sbjct: 88  FGKEFSCLMQS-------ARGFSSGS-DLPPHQEIGMPSLSPTMTEGNIARWLKKEGDKV 139

Query: 112 EVDEPIAQIETDKVTIDVASPEAGTIQKLVAKEG-ETVEPGTKIAVISKSGXXXXXXXXX 170
              E + ++ETDK T+++   E G + K+V  EG + ++ G  IA+  +           
Sbjct: 140 APGEVLCEVETDKATVEMECMEEGYLAKIVKAEGSKEIQVGEVIAITVEDEEDIGKFK-- 197

Query: 171 XXXXXXXXXXXXXXSGGKQTPA--VDSGPIKDSKRAPSAPQPP----VKTPSSAPKP--T 222
                              TP+   D+ P K    A   P PP    VK PSS P+P  +
Sbjct: 198 -----------------DYTPSSTADAAPTK----AEPTPAPPKEEKVKQPSSPPEPKAS 236

Query: 223 EPQLPPK-DRERRVPMTR 239
           +P  PP  DR    P+ R
Sbjct: 237 KPSTPPTGDRVFASPLAR 254


>AT3G52200.1 | Symbols: LTA3 | LTA3; ATP binding /
           dihydrolipoyllysine-residue acetyltransferase |
           chr3:19360317-19366091 FORWARD
          Length = 637

 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/87 (39%), Positives = 51/87 (58%), Gaps = 4/87 (4%)

Query: 75  SFSSDSGDLVDAVV---PFMGESITDGTLAKFLKKPGDRVEVDEPIAQIETDKVTIDVAS 131
           S   D+ DL   VV   P +  ++  G +AK+ KK GD++EV + I +IETDK T++  S
Sbjct: 201 SIQPDASDLPPHVVLEMPALSPTMNQGNIAKWWKKEGDKIEVGDVIGEIETDKATLEFES 260

Query: 132 PEAGTIQKLVAKEG-ETVEPGTKIAVI 157
            E G + K++  EG + V  G  IA+I
Sbjct: 261 LEEGYLAKILIPEGSKDVAVGKPIALI 287



 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 50/80 (62%), Gaps = 3/80 (3%)

Query: 68  LFGFKSRSFSSDSGDLVDAVV--PFMGESITDGTLAKFLKKPGDRVEVDEPIAQIETDKV 125
           +  F  ++FSS +G +   V+  P +  +++ G + K++KK GD+VEV + + +IETDK 
Sbjct: 69  ILRFGVQNFSS-TGPISQTVLAMPALSPTMSHGNVVKWMKKEGDKVEVGDVLCEIETDKA 127

Query: 126 TIDVASPEAGTIQKLVAKEG 145
           T++  S E G + K++  EG
Sbjct: 128 TVEFESQEEGFLAKILVTEG 147


>AT3G13930.1 | Symbols:  | dihydrolipoamide S-acetyltransferase,
           putative | chr3:4596240-4600143 FORWARD
          Length = 539

 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 55/87 (63%), Gaps = 5/87 (5%)

Query: 74  RSFSSDSGDL---VDAVVPFMGESITDGTLAKFLKKPGDRVEVDEPIAQIETDKVTIDVA 130
           R FSS S DL    +  +P +  ++T+G +A++LKK GD+V   E + ++ETDK T+++ 
Sbjct: 100 RGFSSSS-DLPPHQEIGMPSLSPTMTEGNIARWLKKEGDKVAPGEVLCEVETDKATVEME 158

Query: 131 SPEAGTIQKLVAKEG-ETVEPGTKIAV 156
             E G + K+V +EG + ++ G  IA+
Sbjct: 159 CMEEGFLAKIVKEEGAKEIQVGEVIAI 185