Jatropha Genome Database
- JcCA0312381.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0312381.10 - phase: 0 /partial
(338 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G29230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 234 6e-62
AT1G08070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 212 3e-55
AT4G38010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 210 1e-54
AT5G37570.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 205 3e-53
AT1G06145.1 | Symbols: EMB1444 | EMB1444 (EMBRYO DEFECTIVE 1444)... 202 2e-52
AT2G22410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 200 9e-52
AT2G45350.1 | Symbols: CRR4 | CRR4 (CHLORORESPIRATORY REDUCTION ... 200 1e-51
AT2G44880.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 198 4e-51
AT3G15930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 197 8e-51
AT5G15300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 197 9e-51
AT1G31430.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 192 2e-49
AT2G29760.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 192 3e-49
AT3G12770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 189 1e-48
AT3G23330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 189 2e-48
AT1G13410.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 189 3e-48
AT1G74630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 186 2e-47
AT4G18840.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 186 2e-47
AT5G16860.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 184 1e-46
AT2G34400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 174 7e-44
AT2G35030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 173 1e-43
AT4G33990.1 | Symbols: EMB2758 | EMB2758 (embryo defective 2758)... 172 2e-43
AT3G21470.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 172 3e-43
AT4G22760.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 171 5e-43
AT2G13600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 171 6e-43
AT3G05240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 171 6e-43
AT5G27110.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 170 1e-42
AT1G50270.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 170 1e-42
AT2G20540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 169 3e-42
AT3G61170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 169 3e-42
AT4G18750.1 | Symbols: DOT4 | DOT4 (DEFECTIVELY ORGANIZED TRIBUT... 168 5e-42
AT4G30700.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 167 8e-42
AT4G02750.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 167 9e-42
AT2G42920.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 167 9e-42
AT4G33170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 166 2e-41
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 166 3e-41
AT4G35130.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 165 3e-41
AT5G08310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 164 6e-41
AT1G17630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 164 7e-41
AT3G47840.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 164 8e-41
AT4G18520.1 | Symbols: | INVOLVED IN: biological_process unknow... 163 1e-40
AT1G11290.1 | Symbols: CRR22 | CRR22 (CHLORORESPIRATORY REDUCTIO... 163 1e-40
AT1G15510.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 163 2e-40
AT2G21090.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 163 2e-40
AT5G55740.1 | Symbols: CRR21 | CRR21 (chlororespiratory reductio... 163 2e-40
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 162 4e-40
AT4G39530.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 162 4e-40
AT3G14730.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 161 5e-40
AT4G04370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 160 9e-40
AT5G13230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 159 2e-39
AT1G03540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 159 2e-39
AT4G16835.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 159 3e-39
AT1G62260.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 158 6e-39
AT1G04840.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 158 6e-39
AT3G02330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 157 7e-39
AT3G03580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 157 7e-39
AT5G66520.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 157 8e-39
AT5G46460.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 157 1e-38
AT5G44230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 156 2e-38
AT5G56310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 156 2e-38
AT4G21065.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 154 5e-38
AT3G01580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 154 6e-38
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 154 8e-38
AT1G16480.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 154 1e-37
AT3G26782.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED I... 154 1e-37
AT4G14820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 153 1e-37
AT2G33680.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 153 2e-37
AT2G03880.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 152 2e-37
AT1G19720.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 152 4e-37
AT3G11460.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 152 4e-37
AT2G37310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 152 4e-37
AT1G33350.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 151 5e-37
AT1G56690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 151 5e-37
AT2G36980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 150 8e-37
AT2G03380.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 150 1e-36
AT3G53360.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 150 2e-36
AT3G04750.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 150 2e-36
AT5G48910.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 148 5e-36
AT5G06540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 148 5e-36
AT3G26540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 148 6e-36
AT4G19191.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 147 8e-36
AT1G14470.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 147 1e-35
AT3G63370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 147 1e-35
AT1G20230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 147 1e-35
AT4G37380.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 146 2e-35
AT2G40720.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 146 2e-35
AT3G09040.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 146 2e-35
AT1G69350.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 145 3e-35
AT5G52850.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 145 3e-35
AT5G39350.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 145 5e-35
AT2G27610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 145 5e-35
AT3G49740.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 144 7e-35
AT5G08510.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 144 8e-35
AT3G13880.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 144 8e-35
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 143 1e-34
AT2G39620.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 143 2e-34
AT3G25970.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 142 2e-34
AT4G20770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 142 3e-34
AT2G01510.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 142 3e-34
AT5G59200.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 142 3e-34
AT5G61800.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 142 4e-34
AT3G15130.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 142 4e-34
AT4G13650.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 142 4e-34
AT3G49140.2 | Symbols: | EXPRESSED IN: 22 plant structures; EXP... 141 5e-34
AT4G14050.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 141 5e-34
AT3G25060.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 141 5e-34
AT3G49140.1 | Symbols: | EXPRESSED IN: 23 plant structures; EXP... 141 5e-34
AT3G22690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 141 6e-34
AT5G47460.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 140 8e-34
AT3G57430.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 140 8e-34
AT1G25360.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 140 1e-33
AT5G09950.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 140 1e-33
AT4G08210.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 140 1e-33
AT3G26630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 139 2e-33
AT3G02010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 139 3e-33
AT5G15340.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 139 3e-33
AT4G39952.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 139 3e-33
AT1G09190.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 139 4e-33
AT3G62890.1 | Symbols: | binding | chr3:23246168-23247973 FORWARD 139 4e-33
AT4G21300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 138 5e-33
AT3G49170.1 | Symbols: EMB2261 | EMB2261 (embryo defective 2261)... 138 5e-33
AT3G08820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 138 6e-33
AT1G05750.1 | Symbols: PDE247, CLB19 | PDE247 (pigment defective... 137 1e-32
AT1G53600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 136 2e-32
AT1G56570.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 136 2e-32
AT3G13770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 136 2e-32
AT5G13270.1 | Symbols: RARE1 | pentatricopeptide (PPR) repeat-co... 134 8e-32
AT4G25270.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 134 8e-32
AT1G77010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 134 8e-32
AT3G24000.1 | Symbols: | INVOLVED IN: biological_process unknow... 133 2e-31
AT5G40410.1 | Symbols: | INVOLVED IN: biological_process unknow... 133 2e-31
AT5G40405.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 132 2e-31
AT1G18485.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 132 3e-31
AT3G51320.1 | Symbols: | INVOLVED IN: biological_process unknow... 132 4e-31
AT4G37170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 132 4e-31
AT3G58590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 132 5e-31
AT1G10330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 131 7e-31
AT2G02750.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 130 9e-31
AT2G04860.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 130 1e-30
AT4G21065.2 | Symbols: | FUNCTIONS IN: molecular_function unkno... 130 1e-30
AT4G14850.1 | Symbols: LOI1 | LOI1 (lovastatin insensitive 1) | ... 129 2e-30
AT2G46050.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 129 3e-30
AT5G04780.1 | Symbols: | INVOLVED IN: biological_process unknow... 128 4e-30
AT3G46790.1 | Symbols: CRR2 | CRR2 (CHLORORESPIRATORY REDUCTION ... 128 5e-30
AT1G71460.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 127 8e-30
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | EMB175 (EMBRYO ... 127 9e-30
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 126 2e-29
AT2G17210.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 126 2e-29
AT2G33760.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 126 2e-29
AT5G19020.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 125 4e-29
AT1G43980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 125 4e-29
AT1G26900.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 125 4e-29
AT1G06140.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 125 5e-29
AT1G28690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 125 5e-29
AT1G59720.1 | Symbols: CRR28 | CRR28 (CHLORORESPIRATORY REDUCTIO... 124 6e-29
AT1G31920.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 124 9e-29
AT3G20730.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 124 1e-28
AT4G31070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 123 1e-28
AT1G71490.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 123 2e-28
AT1G71420.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 123 2e-28
AT2G36730.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 122 3e-28
AT5G59600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 122 3e-28
AT5G66500.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 122 3e-28
AT5G52630.1 | Symbols: MEF1 | MEF1 (MITOCHONDRIAL RNA EDITING FA... 122 3e-28
AT2G37320.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 122 4e-28
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 121 8e-28
AT1G22830.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 120 1e-27
AT1G22830.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 120 1e-27
AT4G15720.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 120 1e-27
AT4G32430.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 120 1e-27
AT5G39680.1 | Symbols: EMB2744 | EMB2744 (EMBRYO DEFECTIVE 2744)... 117 1e-26
AT4G19220.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 117 1e-26
AT1G23450.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 117 1e-26
AT5G50390.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 117 1e-26
AT5G08490.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 117 1e-26
AT1G77170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 116 2e-26
AT3G22150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 116 2e-26
AT1G64310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 116 3e-26
AT3G56550.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 115 3e-26
AT3G50420.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 114 7e-26
AT2G41080.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 114 7e-26
AT3G49710.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 114 8e-26
AT1G34160.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 112 2e-25
AT1G74400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 112 2e-25
AT1G09220.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 112 3e-25
AT3G47530.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 112 3e-25
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 111 6e-25
AT2G02980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 111 8e-25
AT5G65570.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 110 1e-24
AT4G14170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 110 1e-24
AT3G18840.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 109 3e-24
AT1G03510.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 103 1e-22
AT5G42450.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 102 3e-22
AT5G02860.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 102 3e-22
AT5G61990.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 100 1e-21
AT3G14330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 100 2e-21
AT5G43790.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 100 2e-21
AT3G28640.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 100 2e-21
AT1G62720.1 | Symbols: | INVOLVED IN: biological_process unknow... 100 2e-21
AT5G50990.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 98 7e-21
AT2G31400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 98 8e-21
AT3G05340.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 98 9e-21
AT3G28660.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 97 1e-20
AT1G64580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 97 2e-20
AT1G12700.1 | Symbols: | helicase domain-containing protein / p... 95 7e-20
AT5G39710.1 | Symbols: EMB2745 | EMB2745 (EMBRYO DEFECTIVE 2745)... 94 1e-19
AT1G62680.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:... 92 4e-19
AT5G41170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 5e-19
AT5G16640.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 91 9e-19
AT1G22960.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 91 1e-18
AT1G05670.2 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transfer... 90 2e-18
AT1G05670.1 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transfer... 90 2e-18
AT1G12775.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED I... 90 2e-18
AT1G62670.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 4e-18
AT4G16470.1 | Symbols: | INVOLVED IN: biological_process unknow... 89 6e-18
AT1G11710.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 6e-18
AT1G63150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 88 8e-18
AT1G62930.1 | Symbols: | INVOLVED IN: biological_process unknow... 88 8e-18
AT5G01110.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 1e-17
AT1G63080.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 1e-17
AT3G18970.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 86 2e-17
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 86 5e-17
AT2G18940.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 85 6e-17
AT2G41720.2 | Symbols: EMB2654 | EMB2654 (EMBRYO DEFECTIVE 2654)... 85 8e-17
AT3G04760.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 1e-16
AT5G59900.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 2e-16
AT1G63130.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 2e-16
AT1G74900.1 | Symbols: OTP43 | OTP43 (organelle transcript proce... 83 2e-16
AT2G15630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 83 2e-16
AT5G64320.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 83 2e-16
AT1G06580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 83 2e-16
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 83 3e-16
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 83 3e-16
AT1G63330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 83 3e-16
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 4e-16
AT1G79080.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 81 9e-16
AT4G31850.1 | Symbols: PGR3 | PGR3 (PROTON GRADIENT REGULATION 3... 81 1e-15
AT3G53700.1 | Symbols: MEE40 | MEE40 (maternal effect embryo arr... 81 1e-15
AT3G16710.1 | Symbols: | INVOLVED IN: biological_process unknow... 80 1e-15
AT3G16010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 6e-15
AT2G02150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 78 9e-15
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 78 1e-14
AT3G22470.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 1e-14
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 1e-14
AT3G54980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 1e-14
AT1G12300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 2e-14
AT1G52640.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 2e-14
AT1G12620.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 76 2e-14
AT1G07740.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 76 3e-14
AT3G06920.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 76 3e-14
AT1G51965.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 76 3e-14
AT3G13160.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 76 3e-14
AT1G09900.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 76 4e-14
AT1G31840.1 | Symbols: | LOCATED IN: endomembrane system; EXPRE... 76 4e-14
AT5G65560.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 4e-14
AT1G09680.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 5e-14
AT1G09820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 5e-14
AT5G55840.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 6e-14
AT3G09060.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 8e-14
AT5G46680.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 1e-13
AT1G73710.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 1e-13
AT1G55890.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 1e-13
AT5G65820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 2e-13
AT4G28010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 73 2e-13
AT1G16830.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 73 2e-13
AT5G61400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 73 3e-13
AT1G13040.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 73 3e-13
AT4G11690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 73 3e-13
AT3G13150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 73 3e-13
AT2G39230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 73 3e-13
AT2G16880.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 4e-13
AT1G62910.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 5e-13
AT4G19440.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 6e-13
AT1G19290.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED I... 72 6e-13
AT1G03560.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 6e-13
AT3G16890.1 | Symbols: PPR40 | PPR40 (PENTATRICOPEPTIDE (PPR) DO... 72 7e-13
AT2G01740.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 7e-13
AT1G79540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 2e-12
AT4G34830.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:... 70 2e-12
AT2G34370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 2e-12
AT3G48810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 2e-12
AT5G39980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 3e-12
AT4G26800.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 3e-12
AT2G17140.1 | Symbols: | EXPRESSED IN: 7 plant structures; EXPR... 69 4e-12
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 69 4e-12
AT2G06000.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 5e-12
AT2G06000.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 5e-12
AT1G74850.1 | Symbols: PTAC2 | PTAC2 (PLASTID TRANSCRIPTIONALLY ... 69 5e-12
AT1G63230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 68 8e-12
AT1G74580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 68 9e-12
AT5G18475.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 68 1e-11
AT4G32450.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 1e-11
AT5G40400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 67 1e-11
AT2G35130.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 1e-11
AT1G31790.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 1e-11
AT3G23020.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 1e-11
AT1G63400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 2e-11
AT3G49240.1 | Symbols: emb1796 | emb1796 (embryo defective 1796)... 67 2e-11
AT4G16390.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:... 67 2e-11
AT3G22670.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 2e-11
AT1G08610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 2e-11
AT1G77340.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 66 3e-11
AT2G41720.1 | Symbols: EMB2654 | EMB2654 (EMBRYO DEFECTIVE 2654)... 66 3e-11
AT1G52620.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 66 3e-11
AT3G49730.1 | Symbols: | EXPRESSED IN: 19 plant structures; EXP... 65 4e-11
AT3G60050.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 4e-11
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 7e-11
AT5G38730.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 1e-10
AT4G20090.1 | Symbols: EMB1025 | EMB1025 (embryo defective 1025)... 64 1e-10
AT1G55630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 2e-10
AT3G07290.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 2e-10
AT5G14770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 63 2e-10
AT2G32630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 63 2e-10
AT5G24830.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 4e-10
AT1G13630.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 62 7e-10
AT1G20300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 7e-10
AT4G01570.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 8e-10
AT3G18110.1 | Symbols: EMB1270 | EMB1270 (embryo defective 1270)... 61 9e-10
AT1G63630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 1e-09
AT1G18900.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 1e-09
AT1G18900.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 1e-09
AT1G30290.1 | Symbols: | unknown protein | chr1:10670320-106727... 61 1e-09
AT1G02420.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 1e-09
AT2G26790.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 2e-09
AT1G79490.1 | Symbols: EMB2217 | EMB2217 (embryo defective 2217)... 60 2e-09
AT5G16420.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 2e-09
AT1G77360.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 2e-09
AT2G15690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 3e-09
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 59 4e-09
AT1G53330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 4e-09
AT2G36240.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 59 5e-09
AT3G61360.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 6e-09
AT1G06710.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 6e-09
AT4G21880.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 58 9e-09
AT5G47360.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 1e-08
AT2G25580.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 58 1e-08
AT2G17525.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 1e-08
AT4G04790.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 57 1e-08
AT5G46100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 1e-08
AT1G13800.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 1e-08
AT1G10910.1 | Symbols: | INVOLVED IN: biological_process unknow... 57 1e-08
AT5G43820.1 | Symbols: | INVOLVED IN: biological_process unknow... 57 2e-08
AT3G14580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 2e-08
AT2G19280.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 2e-08
AT5G62370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 2e-08
AT5G27270.1 | Symbols: EMB976 | EMB976 (EMBRYO DEFECTIVE 976) | ... 57 2e-08
AT1G11900.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 2e-08
AT2G01390.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 3e-08
AT5G42310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 3e-08
AT1G66345.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 3e-08
AT5G57250.1 | Symbols: | EXPRESSED IN: 9 plant structures; EXPR... 56 3e-08
AT4G30825.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 4e-08
AT1G74750.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 4e-08
AT1G02060.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 4e-08
AT3G59040.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 6e-08
AT4G19900.1 | Symbols: | glycosyl transferase-related | chr4:10... 55 6e-08
AT1G77405.1 | Symbols: | INVOLVED IN: biological_process unknow... 55 7e-08
AT1G63630.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 8e-08
AT4G26680.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 8e-08
AT2G37230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 8e-08
AT3G59040.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 9e-08
AT2G15980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 1e-07
AT5G06400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 2e-07
AT4G39620.1 | Symbols: EMB2453 | EMB2453 (embryo defective 2453)... 54 2e-07
AT3G61520.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 2e-07
AT1G02150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 3e-07
AT3G62470.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 3e-07
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 4e-07
AT3G09650.1 | Symbols: HCF152, CRM3 | HCF152 (HIGH CHLOROPHYLL F... 52 4e-07
AT3G29290.1 | Symbols: emb2076 | emb2076 (embryo defective 2076)... 52 4e-07
AT1G80550.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 4e-07
AT2G17670.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 6e-07
AT2G18520.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 7e-07
AT4G36680.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 7e-07
AT3G06430.1 | Symbols: EMB2750 | EMB2750 (embryo defective 2750)... 52 7e-07
AT5G28460.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 8e-07
AT5G14820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 1e-06
AT2G28050.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 1e-06
AT3G62540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 1e-06
AT5G02830.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 2e-06
AT1G63320.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 2e-06
AT5G13770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 2e-06
AT4G20740.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 2e-06
AT4G02820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 2e-06
AT5G25630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 2e-06
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 50 3e-06
AT1G29710.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 3e-06
AT2G27800.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Pentatrico... 49 4e-06
AT5G28370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 6e-06
AT5G11310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 6e-06
>AT3G29230.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:11188803-11190605 FORWARD
Length = 600
Score = 234 bits (597), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 122/326 (37%), Positives = 181/326 (55%), Gaps = 8/326 (2%)
Query: 19 NEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTIK 78
N +I+ H QA + MQ G ADN+T+P LLKA + H K
Sbjct: 86 NSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEK 145
Query: 79 TGFYRHIFVQTALINMYGTLHC----TADACKMFENMPVKDLVAWNSMLDAYASNGEMED 134
G I+V ALI+ Y C DA K+FE M +D V+WNSML GE+ D
Sbjct: 146 LGLSSDIYVPNALIDCYS--RCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRD 203
Query: 135 AISLFHMMPLKDLSSFNILISGYSSCGEVLAARSIFDKMAIKDIVSWNSILSACTRAGDM 194
A LF MP +DL S+N ++ GY+ C E+ A +F+KM ++ VSW++++ ++AGDM
Sbjct: 204 ARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDM 263
Query: 195 EKAFALFQEMPM--KNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLS 252
E A +F +MP+ KN ++W ++AG ++G EA L D+M + D S+L+
Sbjct: 264 EMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILA 323
Query: 253 ACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYC 312
AC G L G++IH S L S+ +V AL+DMYAKCG++++A +F KD+
Sbjct: 324 ACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVS 383
Query: 313 WNAIISGLALHGHGYAALKLFGYMKK 338
WN ++ GL +HGHG A++LF M++
Sbjct: 384 WNTMLHGLGVHGHGKEAIELFSRMRR 409
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 108/258 (41%), Gaps = 11/258 (4%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
+P+ V W II + G ++A M G + D +L A ++ +G
Sbjct: 275 LPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLG 334
Query: 70 FAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASN 129
H ++ + +V AL++MY A +F ++P KDLV+WN+ML +
Sbjct: 335 MRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVH 394
Query: 130 GEMEDAISLFHMMPLK----DLSSFNILISGYSSCGEVLAARSIFDKMA-----IKDIVS 180
G ++AI LF M + D +F ++ + G + F M + +
Sbjct: 395 GHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEH 454
Query: 181 WNSILSACTRAGDMEKAFALFQEMPMK-NTISWNTMLAGCLQRGQFSEAVDLFDEM-KTT 238
+ ++ R G +++A + Q MPM+ N + W +L C + A ++ D + K
Sbjct: 455 YGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLD 514
Query: 239 NCLPDYLTATSVLSACAH 256
C P + S + A A
Sbjct: 515 PCDPGNYSLLSNIYAAAE 532
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 72/158 (45%), Gaps = 5/158 (3%)
Query: 183 SILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLP 242
S LS C + + F QE N N+++ Q Q +A +F EM+
Sbjct: 59 SALSLCRQTNLAVRVFNQVQE---PNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFA 115
Query: 243 DYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCG--SIEQALQ 300
D T +L AC+ L +H + GL+S +V AL+D Y++CG + A++
Sbjct: 116 DNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMK 175
Query: 301 IFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMKK 338
+F K +D WN+++ GL G A +LF M +
Sbjct: 176 LFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQ 213
>AT1G08070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:2514374-2516599 REVERSE
Length = 741
Score = 212 bits (539), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 123/362 (33%), Positives = 190/362 (52%), Gaps = 41/362 (11%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTI 77
WN + + H L + A+ YV M G ++YTFP +LK+ K+ A + G HG +
Sbjct: 102 WNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVL 161
Query: 78 KTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAIS 137
K G ++V T+LI+MY DA K+F+ P +D+V++ +++ YAS G +E+A
Sbjct: 162 KLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQK 221
Query: 138 LFHMMPLKDLSSFNILISGYSSCGEVLAARSIFDKMAIKDIVSWNS----ILSAC----- 188
LF +P+KD+ S+N +ISGY+ G A +F M ++ S ++SAC
Sbjct: 222 LFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGS 281
Query: 189 ------------------------------TRAGDMEKAFALFQEMPMKNTISWNTMLAG 218
++ G++E A LF+ +P K+ ISWNT++ G
Sbjct: 282 IELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGG 341
Query: 219 CLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVY--AIYSGLA 276
+ EA+ LF EM + P+ +T S+L ACAHLG+++ G IHVY G+
Sbjct: 342 YTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVT 401
Query: 277 SSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYM 336
++ + T+L+DMYAKCG IE A Q+F K + WNA+I G A+HG A+ LF M
Sbjct: 402 NASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRM 461
Query: 337 KK 338
+K
Sbjct: 462 RK 463
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 143/307 (46%), Gaps = 42/307 (13%)
Query: 72 FHGQTIKTGFYRHIFVQTALIN---MYGTLHCTADACKMFENMPVKDLVAWNSMLDAYAS 128
H Q IK G + + + LI + A +F+ + +L+ WN+M +A
Sbjct: 52 IHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHAL 111
Query: 129 NGEMEDAISLF------------------------------------HMMPLK---DLSS 149
+ + A+ L+ H++ L DL
Sbjct: 112 SSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYV 171
Query: 150 FNILISGYSSCGEVLAARSIFDKMAIKDIVSWNSILSACTRAGDMEKAFALFQEMPMKNT 209
LIS Y G + A +FDK +D+VS+ +++ G +E A LF E+P+K+
Sbjct: 172 HTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDV 231
Query: 210 ISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVY 269
+SWN M++G + G + EA++LF +M TN PD T +V+SACA GS+E G ++H++
Sbjct: 232 VSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLW 291
Query: 270 AIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAA 329
G S+ + AL+D+Y+KCG +E A +F + KD+ WN +I G A
Sbjct: 292 IDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEA 351
Query: 330 LKLFGYM 336
L LF M
Sbjct: 352 LLLFQEM 358
Score = 107 bits (268), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 128/268 (47%), Gaps = 12/268 (4%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
+P +V WN +I + GN ++A+ + +M R D T ++ A ++ + +G
Sbjct: 226 IPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELG 285
Query: 70 FAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASN 129
H GF ++ + ALI++Y AC +FE +P KD+++WN+++ Y
Sbjct: 286 RQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHM 345
Query: 130 GEMEDAISLFHMM-----PLKDLSSFNILISGYSSCGEVLAAR--SIFDKMAIKDIVSWN 182
++A+ LF M D++ +IL + G + R ++ +K + + +
Sbjct: 346 NLYKEALLLFQEMLRSGETPNDVTMLSIL-PACAHLGAIDIGRWIHVYIDKRLKGVTNAS 404
Query: 183 SILSAC----TRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTT 238
S+ ++ + GD+E A +F + K+ SWN M+ G G+ + DLF M+
Sbjct: 405 SLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKI 464
Query: 239 NCLPDYLTATSVLSACAHLGSLETGIKI 266
PD +T +LSAC+H G L+ G I
Sbjct: 465 GIQPDDITFVGLLSACSHSGMLDLGRHI 492
>AT4G38010.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:17859582-17861261 REVERSE
Length = 559
Score = 210 bits (534), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 107/327 (32%), Positives = 186/327 (56%), Gaps = 6/327 (1%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTI 77
+N ++ + + + Y +GF D +TFP + KA GK R G HG
Sbjct: 74 YNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHGIVT 133
Query: 78 KTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAIS 137
K GFY I+VQ +L++ YG + +ACK+F MPV+D+V+W ++ + G ++A+
Sbjct: 134 KMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEALD 193
Query: 138 LFHMMPLK-DLSSFNILISGYSSCGEVLAARSI----FDKMAIKDIVSWNSILSACTRAG 192
F M ++ +L+++ ++ G + + I + ++ + + N+++ +
Sbjct: 194 TFSKMDVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMYVKCE 253
Query: 193 DMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCL-PDYLTATSVL 251
+ A +F E+ K+ +SWN+M++G + + EA+DLF M+T++ + PD TSVL
Sbjct: 254 QLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVL 313
Query: 252 SACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIY 311
SACA LG+++ G +H Y + +G+ H+ TA++DMYAKCG IE AL+IF + K+++
Sbjct: 314 SACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVF 373
Query: 312 CWNAIISGLALHGHGYAALKLFGYMKK 338
WNA++ GLA+HGHG +L+ F M K
Sbjct: 374 TWNALLGGLAIHGHGLESLRYFEEMVK 400
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/338 (26%), Positives = 149/338 (44%), Gaps = 27/338 (7%)
Query: 6 CNCF--MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKN 63
C F MP +V W II G ++A+ T+ M V A T+ +L ++G+
Sbjct: 161 CKVFGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSKMDVEPNLA---TYVCVLVSSGRV 217
Query: 64 CASRIGFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSML 123
+G HG +K + ALI+MY +DA ++F + KD V+WNSM+
Sbjct: 218 GCLSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMI 277
Query: 124 DAYASNGEMEDAISLFHMMPLKD--LSSFNILISGYSSC---GEVLAARSIFDKMAIKDI 178
++AI LF +M +IL S S+C G V R + + + I
Sbjct: 278 SGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGI 337
Query: 179 VSWNS-----ILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFD 233
W++ I+ + G +E A +F + KN +WN +L G G E++ F+
Sbjct: 338 -KWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFE 396
Query: 234 EMKTTNCLPDYLTATSVLSACAHLGSLETG------IKIHVYAIYSGLASSPHVTTALMD 287
EM P+ +T + L+AC H G ++ G +K Y ++ L ++D
Sbjct: 397 EMVKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEH----YGCMID 452
Query: 288 MYAKCGSIEQALQIFFKAQVK-DIYCWNAIISGLALHG 324
+ + G +++AL++ VK D+ AI+S G
Sbjct: 453 LLCRAGLLDEALELVKAMPVKPDVRICGAILSACKNRG 490
>AT5G37570.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:14924494-14926146 REVERSE
Length = 550
Score = 205 bits (522), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 108/330 (32%), Positives = 187/330 (56%), Gaps = 4/330 (1%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGF-RADNYTFPILLKAAGKNCASRI 68
+PS WN +IK + + V + M G R D YTFP+++K N R+
Sbjct: 69 VPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQVRV 128
Query: 69 GFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYAS 128
G + HG ++ GF + + V T+ ++ YG A K+F MP ++ V+W +++ AY
Sbjct: 129 GSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYVK 188
Query: 129 NGEMEDAISLFHMMPLKDLSSFNILISGYSSCGEVLAARSIFDKMAIKDIVSWNSILSAC 188
+GE+E+A S+F +MP ++L S+N L+ G G+++ A+ +FD+M +DI+S+ S++
Sbjct: 189 SGELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDIISYTSMIDGY 248
Query: 189 TRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTAT 248
+ GDM A LF+E + +W+ ++ G Q GQ +EA +F EM N PD
Sbjct: 249 AKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMV 308
Query: 249 SVLSACAHLGSLETGIKIHVYAIYSGLA--SSPHVTTALMDMYAKCGSIEQALQIFFKAQ 306
++SAC+ +G E K+ Y ++ + SS +V AL+DM AKCG +++A ++F +
Sbjct: 309 GLMSACSQMGCFELCEKVDSY-LHQRMNKFSSHYVVPALIDMNAKCGHMDRAAKLFEEMP 367
Query: 307 VKDIYCWNAIISGLALHGHGYAALKLFGYM 336
+D+ + +++ G+A+HG G A++LF M
Sbjct: 368 QRDLVSYCSMMEGMAIHGCGSEAIRLFEKM 397
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 107/270 (39%), Gaps = 79/270 (29%)
Query: 107 MFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMM-------------PL--------- 144
+FE +P WN ++ Y++ + +S+ M PL
Sbjct: 65 VFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNG 124
Query: 145 ------------------KDLSSFNILISGYSSCGEVLAARSIFDKMAIKDIVSWNSILS 186
KD+ + Y C ++ +AR +F +M ++ VSW +++
Sbjct: 125 QVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVV 184
Query: 187 ACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLT 246
A ++G++E+A ++F MP +N SWN ++ G ++ G A LFDEM + +
Sbjct: 185 AYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDIIS---- 240
Query: 247 ATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQ 306
T+++D YAK G + A +F +A+
Sbjct: 241 -----------------------------------YTSMIDGYAKGGDMVSARDLFEEAR 265
Query: 307 VKDIYCWNAIISGLALHGHGYAALKLFGYM 336
D+ W+A+I G A +G A K+F M
Sbjct: 266 GVDVRAWSALILGYAQNGQPNEAFKVFSEM 295
>AT1G06145.1 | Symbols: EMB1444 | EMB1444 (EMBRYO DEFECTIVE 1444) |
chr1:1867129-1868862 REVERSE
Length = 577
Score = 202 bits (514), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 110/320 (34%), Positives = 176/320 (55%), Gaps = 33/320 (10%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTI 77
+N + K + + +++ YV M +YT+ L+KA+ + ASR G +
Sbjct: 94 YNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKAS--SFASRFGESLQAHIW 151
Query: 78 KTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAIS 137
K GF H+ +QT LI+ Y +A K+F+ MP +D +AW +M+ AY +M+ A S
Sbjct: 152 KFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSANS 211
Query: 138 LFHMMPLKDLSSFNILISGYSSCGEVLAARSIFDKMAIKDIVSWNSILSACTRAGDMEKA 197
L + M K+ ++ N LI+GY G + A S+F++M +KDI+SW
Sbjct: 212 LANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISW---------------- 255
Query: 198 FALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHL 257
TM+ G Q ++ EA+ +F +M +PD +T ++V+SACAHL
Sbjct: 256 ---------------TTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHL 300
Query: 258 GSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAII 317
G LE G ++H+Y + +G ++ +AL+DMY+KCGS+E+AL +FF K+++CWN+II
Sbjct: 301 GVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSII 360
Query: 318 SGLALHGHGYAALKLFGYMK 337
GLA HG ALK+F M+
Sbjct: 361 EGLAAHGFAQEALKMFAKME 380
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 103/220 (46%), Gaps = 10/220 (4%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
MP ++ W +IK + +A+ + M G D T ++ A IG
Sbjct: 247 MPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIG 306
Query: 70 FAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASN 129
H T++ GF +++ +AL++MY A +F N+P K+L WNS+++ A++
Sbjct: 307 KEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAH 366
Query: 130 GEMEDAISLFHMMPLKDLSSFNI-LISGYSSC---GEVLAARSIFDKM-----AIKDIVS 180
G ++A+ +F M ++ + + +S +++C G V R I+ M + ++
Sbjct: 367 GFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEH 426
Query: 181 WNSILSACTRAGDMEKAFALFQEMPMK-NTISWNTMLAGC 219
+ ++ ++AG + +A L M + N + W +L GC
Sbjct: 427 YGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGC 466
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/138 (20%), Positives = 60/138 (43%), Gaps = 2/138 (1%)
Query: 182 NSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCL 241
N ++ACT ++ A + +M N +N + G + +++L+ M +
Sbjct: 64 NQFITACTSFKRLDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVS 123
Query: 242 PDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQI 301
P T +S++ A + ++ H++ G + T L+D Y+ G I +A ++
Sbjct: 124 PSSYTYSSLVKASSFASRFGESLQAHIWKF--GFGFHVKIQTTLIDFYSATGRIREARKV 181
Query: 302 FFKAQVKDIYCWNAIISG 319
F + +D W ++S
Sbjct: 182 FDEMPERDDIAWTTMVSA 199
>AT2G22410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9509035-9511080 FORWARD
Length = 681
Score = 200 bits (509), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 118/361 (32%), Positives = 181/361 (50%), Gaps = 42/361 (11%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHG---FRADNYTFPILLKAAGKNCASRIGFAFHG 74
WN I+ N +++ L Y M HG R D++T+P+L K S +G G
Sbjct: 121 WNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILG 180
Query: 75 QTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMED 134
+K V A I+M+ + +A K+F+ PV+DLV+WN +++ Y GE E
Sbjct: 181 HVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEK 240
Query: 135 AISLFHMMP--------------------LKDLSS-------------------FNILIS 155
AI ++ +M L DL+ N L+
Sbjct: 241 AIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMD 300
Query: 156 GYSSCGEVLAARSIFDKMAIKDIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTM 215
+S CG++ AR IFD + + IVSW +++S R G ++ + LF +M K+ + WN M
Sbjct: 301 MFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAM 360
Query: 216 LAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGL 275
+ G +Q + +A+ LF EM+T+N PD +T LSAC+ LG+L+ GI IH Y L
Sbjct: 361 IGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSL 420
Query: 276 ASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGY 335
+ + + T+L+DMYAKCG+I +AL +F Q ++ + AII GLALHG A+ F
Sbjct: 421 SLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNE 480
Query: 336 M 336
M
Sbjct: 481 M 481
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 80/357 (22%), Positives = 160/357 (44%), Gaps = 43/357 (12%)
Query: 11 PSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGF 70
P ++ WN +I + +G AE+A+ Y M+ G + D+ T L+ + G
Sbjct: 218 PVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGK 277
Query: 71 AFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNG 130
F+ + G I + AL++M+ +A ++F+N+ + +V+W +M+ YA G
Sbjct: 278 EFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCG 337
Query: 131 EMEDAISLFHMMPLKDLSSFNILISGYSSCGEVLAARSIFDKMAIK----DIVSWNSILS 186
++ + LF M KD+ +N +I G A ++F +M D ++ LS
Sbjct: 338 LLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLS 397
Query: 187 ACT-----------------------------------RAGDMEKAFALFQEMPMKNTIS 211
AC+ + G++ +A ++F + +N+++
Sbjct: 398 ACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLT 457
Query: 212 WNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAI 271
+ ++ G G S A+ F+EM PD +T +LSAC H G ++TG + + +
Sbjct: 458 YTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTG-RDYFSQM 516
Query: 272 YSGLASSPHVT--TALMDMYAKCGSIEQALQIFFKAQVK-DIYCWNAIISGLALHGH 325
S +P + + ++D+ + G +E+A ++ ++ D W A++ G +HG+
Sbjct: 517 KSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGN 573
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 85/147 (57%)
Query: 192 GDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVL 251
GDME A +F E P+++ +SWN ++ G + G+ +A+ ++ M++ PD +T ++
Sbjct: 205 GDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLV 264
Query: 252 SACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIY 311
S+C+ LG L G + + Y +GL + + ALMDM++KCG I +A +IF + + I
Sbjct: 265 SSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIV 324
Query: 312 CWNAIISGLALHGHGYAALKLFGYMKK 338
W +ISG A G + KLF M++
Sbjct: 325 SWTTMISGYARCGLLDVSRKLFDDMEE 351
>AT2G45350.1 | Symbols: CRR4 | CRR4 (CHLORORESPIRATORY REDUCTION 4)
| chr2:18694816-18696636 REVERSE
Length = 606
Score = 200 bits (508), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 117/351 (33%), Positives = 182/351 (51%), Gaps = 35/351 (9%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTI 77
WN +IK H + QA+L M +G D ++ ++LKA + + G HG
Sbjct: 82 WNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKGGMQIHGFLK 141
Query: 78 KTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNG------- 130
KTG + +F+Q LI +Y C + +MF+ MP +D V++NSM+D Y G
Sbjct: 142 KTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARE 201
Query: 131 -------EMEDAIS--------------------LFHMMPLKDLSSFNILISGYSSCGEV 163
EM++ IS LF MP KDL S+N +I GY G +
Sbjct: 202 LFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDLISWNSMIDGYVKHGRI 261
Query: 164 LAARSIFDKMAIKDIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRG 223
A+ +FD M +D+V+W +++ + G + A LF +MP ++ +++N+M+AG +Q
Sbjct: 262 EDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNK 321
Query: 224 QFSEAVDLFDEM-KTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVT 282
EA+++F +M K ++ LPD T VL A A LG L I +H+Y + +
Sbjct: 322 YHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLG 381
Query: 283 TALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLF 333
AL+DMY+KCGSI+ A+ +F + K I WNA+I GLA+HG G +A +
Sbjct: 382 VALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDML 432
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 138/319 (43%), Gaps = 61/319 (19%)
Query: 73 HGQTIKTGFYRHIFVQTALINMYGTLHCT--ADACK---------MFENMPVKDLVAWNS 121
HG+ IKTG ++ + T ++ + + AD + F V+D WN+
Sbjct: 25 HGRLIKTGIIKNSNLTTRIVLAFASSRRPYLADFARCVFHEYHVCSFSFGEVEDPFLWNA 84
Query: 122 MLDAYA----------------SNGEMEDAISLFHMMP-----------------LK--- 145
++ +++ NG D SL ++ LK
Sbjct: 85 VIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKGGMQIHGFLKKTG 144
Query: 146 ---DLSSFNILISGYSSCGEVLAARSIFDKMAIKDIVSWNSILSACTRAGDMEKAFALFQ 202
DL N LI Y CG + +R +FD+M +D VS+NS++ + G + A LF
Sbjct: 145 LWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARELFD 204
Query: 203 EMP--MKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSL 260
MP MKN ISWN+M++G Q S+ VD+ ++ D ++ S++ G +
Sbjct: 205 LMPMEMKNLISWNSMISG---YAQTSDGVDIASKLFADMPEKDLISWNSMIDGYVKHGRI 261
Query: 261 ETGIKIHVYAIYSGLASSPHVTTALM-DMYAKCGSIEQALQIFFKAQVKDIYCWNAIISG 319
E ++ + VT A M D YAK G + A +F + +D+ +N++++G
Sbjct: 262 EDA-----KGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAG 316
Query: 320 LALHGHGYAALKLFGYMKK 338
+ + AL++F M+K
Sbjct: 317 YVQNKYHMEALEIFSDMEK 335
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 116/277 (41%), Gaps = 42/277 (15%)
Query: 89 TALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMPLKDLS 148
++I+ Y DA +F+ MP +D+V W +M+D YA G + A +LF MP +D+
Sbjct: 249 NSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVV 308
Query: 149 SFNILISGYSSCGEVLAARSIFDKMA-----IKDIVSWNSILSACTRAGDMEKAFAL--- 200
++N +++GY + A IF M + D + +L A + G + KA +
Sbjct: 309 AYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLY 368
Query: 201 --------------------------------FQEMPMKNTISWNTMLAGCLQRGQFSEA 228
F+ + K+ WN M+ G G A
Sbjct: 369 IVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESA 428
Query: 229 VDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIK-IHVYAIYSGLASSPHVTTALMD 287
D+ +++ + PD +T VL+AC+H G ++ G+ + + ++D
Sbjct: 429 FDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVD 488
Query: 288 MYAKCGSIEQALQIFFKAQVK-DIYCWNAIISGLALH 323
+ ++ GSIE A + + V+ + W ++ + H
Sbjct: 489 ILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHH 525
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/291 (21%), Positives = 122/291 (41%), Gaps = 39/291 (13%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHG-FRADNYTFPILLKAAGKNCASRI 68
MP +V +N ++ ++ +A+ + +M+ D+ T I+L A +
Sbjct: 302 MPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSK 361
Query: 69 GFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYAS 128
H ++ FY + ALI+MY A +FE + K + WN+M+ A
Sbjct: 362 AIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAI 421
Query: 129 NGEMEDAISLFHMMPLKDLSSFNILISGYSSCGEVLAARSIFDKMAIK-DIVSWNSILSA 187
+G E S+F++L+ +++++K D +++ +L+A
Sbjct: 422 HGLGE--------------SAFDMLLQ--------------IERLSLKPDDITFVGVLNA 453
Query: 188 CTRAGDMEKAFALFQEMPMKNTISWNTMLAGCL-----QRGQFSEAVDLFDEMKTTNCLP 242
C+ +G +++ F+ M K+ I GC+ + G A +L +EM P
Sbjct: 454 CSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPVE---P 510
Query: 243 DYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCG 293
+ + + L+AC+H ETG + + I +P L +MYA G
Sbjct: 511 NDVIWRTFLTACSHHKEFETGELVAKHLILQA-GYNPSSYVLLSNMYASFG 560
>AT2G44880.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:18505239-18506906 FORWARD
Length = 555
Score = 198 bits (503), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 111/324 (34%), Positives = 175/324 (54%), Gaps = 9/324 (2%)
Query: 19 NEIIKKHMLVGNAEQAVLTYVNMQVHG-FRADNYTFPILLKAAGKNCASRIGFAFHGQTI 77
N +IK ++ + Y +++ F DN+TF L K+ + G H Q
Sbjct: 46 NSMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIW 105
Query: 78 KTGFYRHIFVQTALINMY---GTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMED 134
+ GF ++V T +++MY G + C +A F+ MP + V+W +++ Y GE++
Sbjct: 106 RFGFCADMYVSTGVVDMYAKFGKMGCARNA---FDEMPHRSEVSWTALISGYIRCGELDL 162
Query: 135 AISLFHMMP-LKDLSSFNILISGYSSCGEVLAARSIFDKMAIKDIVSWNSILSACTRAGD 193
A LF MP +KD+ +N ++ G+ G++ +AR +FD+M K +++W +++ D
Sbjct: 163 ASKLFDQMPHVKDVVIYNAMMDGFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKD 222
Query: 194 MEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCL-PDYLTATSVLS 252
++ A LF MP +N +SWNTM+ G Q Q E + LF EM+ T L PD +T SVL
Sbjct: 223 IDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLP 282
Query: 253 ACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYC 312
A + G+L G H + L V TA++DMY+KCG IE+A +IF + K +
Sbjct: 283 AISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVAS 342
Query: 313 WNAIISGLALHGHGYAALKLFGYM 336
WNA+I G AL+G+ AAL LF M
Sbjct: 343 WNAMIHGYALNGNARAALDLFVTM 366
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 106/267 (39%), Gaps = 36/267 (13%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQ-VHGFRADNYTFPILLKAAGKNCASRI 68
MP + WN +I + ++ + + MQ D+ T +L A A +
Sbjct: 233 MPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSL 292
Query: 69 GFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYAS 128
G H + + + V TA+++MY A ++F+ MP K + +WN+M+ YA
Sbjct: 293 GEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYAL 352
Query: 129 NGEMEDAISLFHMMPLKDLSSFNILISGYSSCGEVLAARSIFDKMAIKDIVSWNSILSAC 188
NG A+ LF M +++ D ++ ++++AC
Sbjct: 353 NGNARAALDLFVTMMIEEKP----------------------------DEITMLAVITAC 384
Query: 189 TRAGDME---KAFALFQEMPMKNTISWNTMLAGCLQR-GQFSEAVDLFDEMKTTNCLPDY 244
G +E K F + +EM + I + L R G EA DL M P+
Sbjct: 385 NHGGLVEEGRKWFHVMREMGLNAKIEHYGCMVDLLGRAGSLKEAEDLITNMPFE---PNG 441
Query: 245 LTATSVLSACAHLGSLETGIKIHVYAI 271
+ +S LSAC +E +I A+
Sbjct: 442 IILSSFLSACGQYKDIERAERILKKAV 468
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 82/186 (44%), Gaps = 40/186 (21%)
Query: 153 LISGYSSCGEVLAARSIFDKMAIKDIVSWNSILSACTRAGDMEKAFALFQEMP-MKNTIS 211
++ Y+ G++ AR+ FD+M + VSW +++S R G+++ A LF +MP +K+ +
Sbjct: 119 VVDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVKDVVI 178
Query: 212 WNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAI 271
+N M+ G ++ G + A LFDEM T +V++
Sbjct: 179 YNAMMDGFVKSGDMTSARRLFDEM----------THKTVITW------------------ 210
Query: 272 YSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALK 331
T ++ Y I+ A ++F +++ WN +I G + ++
Sbjct: 211 -----------TTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIR 259
Query: 332 LFGYMK 337
LF M+
Sbjct: 260 LFQEMQ 265
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 70/142 (49%), Gaps = 2/142 (1%)
Query: 197 AFALFQEMPMKN-TISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCL-PDYLTATSVLSAC 254
A LF + P ++ + N+M+ L+ Q+ ++ L+ +++ C PD T T++ +C
Sbjct: 29 ARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTLTKSC 88
Query: 255 AHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWN 314
+ + G+++H G + +V+T ++DMYAK G + A F + + W
Sbjct: 89 SLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVSWT 148
Query: 315 AIISGLALHGHGYAALKLFGYM 336
A+ISG G A KLF M
Sbjct: 149 ALISGYIRCGELDLASKLFDQM 170
>AT3G15930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5387444-5389690 FORWARD
Length = 687
Score = 197 bits (501), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 117/368 (31%), Positives = 183/368 (49%), Gaps = 40/368 (10%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCAS-RI 68
+P +V WN +IK V + V Y+NM G D++TFP LL ++ +
Sbjct: 94 IPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALAC 153
Query: 69 GFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYAS 128
G H +K G +++VQ AL+ MY A +F+ +D+ +WN M+ Y
Sbjct: 154 GKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNR 213
Query: 129 NGEMEDAISLFHMMP--------------------LKD-------------------LSS 149
E E++I L M +KD L
Sbjct: 214 MKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRL 273
Query: 150 FNILISGYSSCGEVLAARSIFDKMAIKDIVSWNSILSACTRAGDMEKAFALFQEMPMKNT 209
N L++ Y++CGE+ A IF M +D++SW SI+ G+++ A F +MP+++
Sbjct: 274 ENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDR 333
Query: 210 ISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVY 269
ISW M+ G L+ G F+E++++F EM++ +PD T SVL+ACAHLGSLE G I Y
Sbjct: 334 ISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTY 393
Query: 270 AIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAA 329
+ + + V AL+DMY KCG E+A ++F +D + W A++ GLA +G G A
Sbjct: 394 IDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEA 453
Query: 330 LKLFGYMK 337
+K+F M+
Sbjct: 454 IKVFFQMQ 461
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 82/356 (23%), Positives = 151/356 (42%), Gaps = 51/356 (14%)
Query: 14 EVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFH 73
+V WN +I + + E+++ V M+ + + T ++L A K + H
Sbjct: 200 DVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVH 259
Query: 74 GQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEME 133
+ + ++ AL+N Y A ++F +M +D+++W S++ Y G ++
Sbjct: 260 EYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLK 319
Query: 134 DAISLFHMMPLKDLSSFNILISGYSSCGEVLAARSIFDKMA----IKDIVSWNSILSACT 189
A + F MP++D S+ I+I GY G + IF +M I D + S+L+AC
Sbjct: 320 LARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACA 379
Query: 190 RAGDME-----------------------------------KAFALFQEMPMKNTISWNT 214
G +E KA +F +M ++ +W
Sbjct: 380 HLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTA 439
Query: 215 MLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSG 274
M+ G GQ EA+ +F +M+ + PD +T VLSAC H G ++ K ++
Sbjct: 440 MVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARK-----FFAK 494
Query: 275 LASSPHVTTAL------MDMYAKCGSIEQALQIFFKAQVK-DIYCWNAIISGLALH 323
+ S + +L +DM + G +++A +I K + + W A++ LH
Sbjct: 495 MRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLH 550
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 126/278 (45%), Gaps = 15/278 (5%)
Query: 72 FHGQTIKTGFYRHIFVQTALINMYGTL---HCTADACKMFENMPVKDLVAWNSMLDAYAS 128
H Q+I G + Q L + + H + A K+F +P D+V WN+M+ ++
Sbjct: 53 LHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSY-AYKLFVKIPEPDVVVWNNMIKGWSK 111
Query: 129 NGEMEDAISLFHMMPLK-----DLSSFNILISGYSSCGEVLAARSIFDKMAIK-----DI 178
+ + L+ M LK D +F L++G G LA +K ++
Sbjct: 112 VDCDGEGVRLYLNM-LKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGSNL 170
Query: 179 VSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTT 238
N+++ + G M+ A +F ++ SWN M++G + ++ E+++L EM+
Sbjct: 171 YVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERN 230
Query: 239 NCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQA 298
P +T VLSAC+ + + ++H Y S + AL++ YA CG ++ A
Sbjct: 231 LVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIA 290
Query: 299 LQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYM 336
++IF + +D+ W +I+ G G+ A F M
Sbjct: 291 VRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQM 328
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 99/218 (45%), Gaps = 10/218 (4%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
MP + W +I ++ G +++ + MQ G D +T +L A + IG
Sbjct: 328 MPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIG 387
Query: 70 FAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASN 129
K + V ALI+MY C+ A K+F +M +D W +M+ A+N
Sbjct: 388 EWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANN 447
Query: 130 GEMEDAISLFHMMPLKDLSSFNI----LISGYSSCGEVLAARSIFDKMAIK-----DIVS 180
G+ ++AI +F M + +I ++S + G V AR F KM +V
Sbjct: 448 GQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVH 507
Query: 181 WNSILSACTRAGDMEKAFALFQEMPMK-NTISWNTMLA 217
+ ++ RAG +++A+ + ++MPM N+I W +L
Sbjct: 508 YGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLG 545
>AT5G15300.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:4968384-4970030 REVERSE
Length = 548
Score = 197 bits (501), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 112/324 (34%), Positives = 179/324 (55%), Gaps = 42/324 (12%)
Query: 25 HMLVGNA-----EQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTIKT 79
H+L G+A E+ V Y M+ G D YTF +LKA K GFAFHG+ ++
Sbjct: 82 HVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRH 141
Query: 80 GFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAISLF 139
GF + +V+ ALI + A ++F++ VAW+SM YA G++++A+ LF
Sbjct: 142 GFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLF 201
Query: 140 HMMPLKDLSSFNILISGYSSCGEVLAARSIFDKMAIKDIVSWNSILSACTRAGDMEKAFA 199
MP KD ++N++I+G C E+ +AR +FD+ KD+V+WN+++S G ++A
Sbjct: 202 DEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALG 261
Query: 200 LFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGS 259
+F+ EM+ PD +T S+LSACA LG
Sbjct: 262 IFK-------------------------------EMRDAGEHPDVVTILSLLSACAVLGD 290
Query: 260 LETGIKIHVYAIYSG-LASSPHVTT----ALMDMYAKCGSIEQALQIFFKAQVKDIYCWN 314
LETG ++H+Y + + ++SS +V T AL+DMYAKCGSI++A+++F + +D+ WN
Sbjct: 291 LETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWN 350
Query: 315 AIISGLALHGHGYAALKLFGYMKK 338
+I GLALH H ++++F M++
Sbjct: 351 TLIVGLALH-HAEGSIEMFEEMQR 373
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 84/186 (45%), Gaps = 6/186 (3%)
Query: 157 YSSCGEVLAARSIFDKMAIKDIVSWNSIL------SACTRAGDMEKAFALFQEMPMKNTI 210
+ +C + + I M + ++S S++ ++ + G ++ A LF E+P +
Sbjct: 19 WQNCKNIRTLKQIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFDEIPKPDVS 78
Query: 211 SWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYA 270
N +L G Q + + V L+ EM+ PD T T VL AC+ L G H
Sbjct: 79 ICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKV 138
Query: 271 IYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAAL 330
+ G + +V AL+ +A CG + A ++F + W+++ SG A G A+
Sbjct: 139 VRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAM 198
Query: 331 KLFGYM 336
+LF M
Sbjct: 199 RLFDEM 204
>AT1G31430.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11254025-11255737 REVERSE
Length = 570
Score = 192 bits (488), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 108/337 (32%), Positives = 171/337 (50%), Gaps = 39/337 (11%)
Query: 40 NMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTIKTGFYRHIFVQTALINMYGTLH 99
++ G DN+T P++LK+ G+ G HG +K G +V +L+ MY +L
Sbjct: 36 ELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAVKAGLEFDSYVSNSLMGMYASLG 95
Query: 100 CTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMP---------------- 143
K+F+ MP +D+V+WN ++ +Y NG EDAI +F M
Sbjct: 96 KIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTL 155
Query: 144 -----LKDL-----------SSF-------NILISGYSSCGEVLAARSIFDKMAIKDIVS 180
LK+L + F N L+ + CG + AR++FD M K++
Sbjct: 156 SACSALKNLEIGERIYRFVVTEFEMSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVKC 215
Query: 181 WNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNC 240
W S++ G +++A LF+ P+K+ + W M+ G +Q +F EA++LF M+T
Sbjct: 216 WTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGI 275
Query: 241 LPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQ 300
PD S+L+ CA G+LE G IH Y + + V TAL+DMYAKCG IE AL+
Sbjct: 276 RPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALE 335
Query: 301 IFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMK 337
+F++ + +D W ++I GLA++G AL L+ M+
Sbjct: 336 VFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEME 372
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 142/338 (42%), Gaps = 42/338 (12%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNM-QVHGFRADNYTFPILLKAAGKNCASRI 68
MP +V WN +I ++ G E A+ + M Q + D T L A I
Sbjct: 107 MPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEI 166
Query: 69 GFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYAS 128
G + + + T F + + AL++M+ C A +F++M K++ W SM+ Y S
Sbjct: 167 GERIY-RFVVTEFEMSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVS 225
Query: 129 NGEMEDAISLFHMMPLKDLSSFNILISGYSSCGEVLAARSIFDKMAIKDIVSWN----SI 184
G +++A LF P+KD+ + +++GY A +F M I N S+
Sbjct: 226 TGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSL 285
Query: 185 LSACTRAGDMEK-----------------------------------AFALFQEMPMKNT 209
L+ C + G +E+ A +F E+ ++T
Sbjct: 286 LTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDT 345
Query: 210 ISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKI-HV 268
SW +++ G G A+DL+ EM+ D +T +VL+AC H G + G KI H
Sbjct: 346 ASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHS 405
Query: 269 YAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQ 306
+ + L+D+ + G +++A ++ K +
Sbjct: 406 MTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKMR 443
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 63/127 (49%)
Query: 212 WNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAI 271
+N ML F++ + LF E++ PD T VL + L + G K+H YA+
Sbjct: 14 YNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAV 73
Query: 272 YSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALK 331
+GL +V+ +LM MYA G IE ++F + +D+ WN +IS +G A+
Sbjct: 74 KAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIG 133
Query: 332 LFGYMKK 338
+F M +
Sbjct: 134 VFKRMSQ 140
>AT2G29760.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:12712884-12715100 FORWARD
Length = 738
Score = 192 bits (488), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 188/362 (51%), Gaps = 41/362 (11%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGF-RADNYTFPILLKAAGKNCASRIGFAFHGQT 76
WN +I+ + + ++ +++M + YTFP L+KAA + + +G + HG
Sbjct: 98 WNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMA 157
Query: 77 IKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAI 136
+K+ +FV +LI+ Y + ACK+F + KD+V+WNSM++ + G + A+
Sbjct: 158 VKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKAL 217
Query: 137 SLFHMMPLKDLSSFNILISG---------------------------------------Y 157
LF M +D+ + ++ + G Y
Sbjct: 218 ELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMY 277
Query: 158 SSCGEVLAARSIFDKMAIKDIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLA 217
+ CG + A+ +FD M KD V+W ++L + D E A + MP K+ ++WN +++
Sbjct: 278 TKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALIS 337
Query: 218 GCLQRGQFSEAVDLFDEMK-TTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLA 276
Q G+ +EA+ +F E++ N + +T S LSACA +G+LE G IH Y G+
Sbjct: 338 AYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIR 397
Query: 277 SSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYM 336
+ HVT+AL+ MY+KCG +E++ ++F + +D++ W+A+I GLA+HG G A+ +F M
Sbjct: 398 MNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKM 457
Query: 337 KK 338
++
Sbjct: 458 QE 459
Score = 117 bits (294), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 140/280 (50%), Gaps = 17/280 (6%)
Query: 73 HGQTIKTGFYRHIFVQTALINM--YGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNG 130
HG I+TG + + + L M + A K+F+ +P + AWN+++ AYAS
Sbjct: 50 HGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGP 109
Query: 131 E-------MEDAISLFHMMPLKDLSSFNILISGYSSCGEVLAARSIFDKMAIK-----DI 178
+ D +S P K +F LI + + +S+ MA+K D+
Sbjct: 110 DPVLSIWAFLDMVSESQCYPNK--YTFPFLIKAAAEVSSLSLGQSLHG-MAVKSAVGSDV 166
Query: 179 VSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTT 238
NS++ GD++ A +F + K+ +SWN+M+ G +Q+G +A++LF +M++
Sbjct: 167 FVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESE 226
Query: 239 NCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQA 298
+ ++T VLSACA + +LE G ++ Y + + + + A++DMY KCGSIE A
Sbjct: 227 DVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDA 286
Query: 299 LQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMKK 338
++F + KD W ++ G A+ AA ++ M +
Sbjct: 287 KRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQ 326
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/354 (23%), Positives = 154/354 (43%), Gaps = 42/354 (11%)
Query: 14 EVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFH 73
+V WN +I + G+ ++A+ + M+ +A + T +L A K G
Sbjct: 196 DVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVC 255
Query: 74 GQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEME 133
+ ++ + A+++MY DA ++F+ M KD V W +MLD YA + + E
Sbjct: 256 SYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYE 315
Query: 134 DAISLFHMMPLKDLSSFNILISGYSSCGEVLAARSIFDKMAIKDIVSWNSI-----LSAC 188
A + + MP KD+ ++N LIS Y G+ A +F ++ ++ + N I LSAC
Sbjct: 316 AAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSAC 375
Query: 189 -----------------------------------TRAGDMEKAFALFQEMPMKNTISWN 213
++ GD+EK+ +F + ++ W+
Sbjct: 376 AQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWS 435
Query: 214 TMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKI-HVYAIY 272
M+ G G +EAVD+F +M+ N P+ +T T+V AC+H G ++ + H
Sbjct: 436 AMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESN 495
Query: 273 SGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQV-KDIYCWNAIISGLALHGH 325
G+ ++D+ + G +E+A++ + W A++ +H +
Sbjct: 496 YGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHAN 549
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 125/293 (42%), Gaps = 20/293 (6%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVH-GFRADNYTFPILLKAAGKNCASRI 68
MP ++ WN +I + G +A++ + +Q+ + + T L A + A +
Sbjct: 324 MPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALEL 383
Query: 69 GFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYAS 128
G H K G + V +ALI+MY + ++F ++ +D+ W++M+ A
Sbjct: 384 GRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAM 443
Query: 129 NGEMEDAISLFHMMPLKDLS----SFNILISGYSSCGEVLAARSIFDKMA-----IKDIV 179
+G +A+ +F+ M ++ +F + S G V A S+F +M + +
Sbjct: 444 HGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEK 503
Query: 180 SWNSILSACTRAGDMEKAFALFQEMPMKNTIS-WNTMLAGCLQRGQFSEAVDLFDEMKTT 238
+ I+ R+G +EKA + MP+ + S W +L C + A EM T
Sbjct: 504 HYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLA-----EMACT 558
Query: 239 NCL---PDYLTATSVLSAC-AHLGSLETGIKIHVYAIYSGLASSPHVTTALMD 287
L P A +LS A LG E ++ + +GL P ++ +D
Sbjct: 559 RLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEID 611
>AT3G12770.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4056900-4059193 REVERSE
Length = 719
Score = 189 bits (481), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 109/342 (31%), Positives = 183/342 (53%), Gaps = 16/342 (4%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
+P ++ WN II+ + + + A+L Y NMQ+ D++TFP LLKA ++G
Sbjct: 79 LPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMG 138
Query: 70 FAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPV--KDLVAWNSMLDAYA 127
H Q + GF +FVQ LI +Y A +FE +P+ + +V+W +++ AYA
Sbjct: 139 RFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYA 198
Query: 128 SNGEMEDAISLFHMMPLKDLS----SFNILISGYSSCGEVLAARSIFD---KMAIKD--- 177
NGE +A+ +F M D+ + +++ ++ ++ RSI KM ++
Sbjct: 199 QNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPD 258
Query: 178 -IVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMK 236
++S N++ + C G + A LF +M N I WN M++G + G EA+D+F EM
Sbjct: 259 LLISLNTMYAKC---GQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMI 315
Query: 237 TTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIE 296
+ PD ++ TS +SACA +GSLE ++ Y S +++AL+DM+AKCGS+E
Sbjct: 316 NKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVE 375
Query: 297 QALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMKK 338
A +F + +D+ W+A+I G LHG A+ L+ M++
Sbjct: 376 GARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMER 417
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 146/337 (43%), Gaps = 13/337 (3%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
+P + W I+ + G +A+ + M+ + D +L A + G
Sbjct: 182 LPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQG 241
Query: 70 FAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASN 129
+ H +K G + +L MY A A +F+ M +L+ WN+M+ YA N
Sbjct: 242 RSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKN 301
Query: 130 GEMEDAISLFHMMPLKDLSSFNILI-SGYSSCGEVLA---ARSIFDKMAI----KDIVSW 181
G +AI +FH M KD+ I I S S+C +V + ARS+++ + D+
Sbjct: 302 GYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFIS 361
Query: 182 NSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCL 241
++++ + G +E A +F ++ + W+ M+ G G+ EA+ L+ M+
Sbjct: 362 SALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVH 421
Query: 242 PDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQI 301
P+ +T +L AC H G + G + ++D+ + G ++QA ++
Sbjct: 422 PNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEV 481
Query: 302 FFKAQVKD-IYCWNAIISGLALHGH----GYAALKLF 333
V+ + W A++S H H YAA +LF
Sbjct: 482 IKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLF 518
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 73/157 (46%), Gaps = 2/157 (1%)
Query: 184 ILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPD 243
++ A + GD+ A +F ++P WN ++ G + F +A+ ++ M+ PD
Sbjct: 59 LIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPD 118
Query: 244 YLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIF- 302
T +L AC+ L L+ G +H G + V L+ +YAKC + A +F
Sbjct: 119 SFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFE 178
Query: 303 -FKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMKK 338
+ I W AI+S A +G AL++F M+K
Sbjct: 179 GLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRK 215
>AT3G23330.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:8347200-8349347 FORWARD
Length = 679
Score = 189 bits (480), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 108/337 (32%), Positives = 183/337 (54%), Gaps = 8/337 (2%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
+ S V W +I+ +A+ ++V M+ G D+ FP +LK+ R G
Sbjct: 65 LKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFG 124
Query: 70 FAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASN 129
+ HG ++ G ++ AL+NMY L ++FE MP KD+V++N+++ YA +
Sbjct: 125 ESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMDSVRRVFEVMPRKDVVSYNTIIAGYAQS 184
Query: 130 GEMEDAISLFHMMPLKDLSSFNILISG----YSSCGEVLAARSIFDKMAIK----DIVSW 181
G EDA+ + M DL + +S +S +V+ + I + K D+
Sbjct: 185 GMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIG 244
Query: 182 NSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCL 241
+S++ ++ +E + +F + ++ ISWN+++AG +Q G+++EA+ LF +M T
Sbjct: 245 SSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVK 304
Query: 242 PDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQI 301
P + +SV+ ACAHL +L G ++H Y + G S+ + +AL+DMY+KCG+I+ A +I
Sbjct: 305 PGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKI 364
Query: 302 FFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMKK 338
F + V D W AII G ALHGHG+ A+ LF MK+
Sbjct: 365 FDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKR 401
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/334 (24%), Positives = 146/334 (43%), Gaps = 30/334 (8%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
MP +V +N II + G E A+ M + D++T +L + G
Sbjct: 166 MPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKG 225
Query: 70 FAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASN 129
HG I+ G +++ ++L++MY D+ ++F + +D ++WNS++ Y N
Sbjct: 226 KEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQN 285
Query: 130 GEMEDAISLFHMMPLKDLSSFNILIS--------------GYSSCGEVLAA---RSIFDK 172
G +A+ LF M + + S G G VL +IF
Sbjct: 286 GRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIA 345
Query: 173 MAIKDIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLF 232
A+ D+ S + G+++ A +F M + + +SW ++ G G EAV LF
Sbjct: 346 SALVDMYS---------KCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLF 396
Query: 233 DEMKTTNCLPDYLTATSVLSACAHLGSLET--GIKIHVYAIYSGLASSPHVTTALMDMYA 290
+EMK P+ + +VL+AC+H+G ++ G + +Y GL A+ D+
Sbjct: 397 EEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVY-GLNQELEHYAAVADLLG 455
Query: 291 KCGSIEQALQIFFKAQVKDI-YCWNAIISGLALH 323
+ G +E+A K V+ W+ ++S ++H
Sbjct: 456 RAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVH 489
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 67/136 (49%)
Query: 201 FQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSL 260
F+ + ++W +++ + FS+A+ F EM+ + PD+ SVL +C + L
Sbjct: 62 FKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDL 121
Query: 261 ETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGL 320
G +H + + G+ + ALM+MYAK ++ ++F KD+ +N II+G
Sbjct: 122 RFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMDSVRRVFEVMPRKDVVSYNTIIAGY 181
Query: 321 ALHGHGYAALKLFGYM 336
A G AL++ M
Sbjct: 182 AQSGMYEDALRMVREM 197
>AT1G13410.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 17 plant
structures; EXPRESSED DURING: 8 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT4G02750.1); Has 13539 Blast hits to 4793
proteins in 111 species: Archae - 0; Bacteria - 0;
Metazoa - 25; Fungi - 35; Plants - 13298; Viruses - 0;
Other Eukaryotes - 181 (source: NCBI BLink). |
chr1:4601526-4603174 FORWARD
Length = 474
Score = 189 bits (479), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 100/252 (39%), Positives = 145/252 (57%), Gaps = 2/252 (0%)
Query: 88 QTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMPLKDL 147
Q L M + A A K+F M K++V W SM++ Y N ++ A F + P +D+
Sbjct: 31 QMFLFGMLCLMGVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFDLSPERDI 90
Query: 148 SSFNILISGYSSCGEVLAARSIFDKMAIKDIVSWNSILSACTRAGDMEKAFALFQEMPMK 207
+N +ISGY G +L ARS+FD+M +D++SWN++L GDME +F +MP +
Sbjct: 91 VLWNTMISGYIEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMPER 150
Query: 208 NTISWNTMLAGCLQRGQFSEAVDLFDEM-KTTNCLPDYLTATSVLSACAHLGSLETGIKI 266
N SWN ++ G Q G+ SE + F M + +P+ T T VLSACA LG+ + G +
Sbjct: 151 NVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWV 210
Query: 267 HVYAIYSGLAS-SPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGH 325
H Y G +V AL+DMY KCG+IE A+++F + +D+ WN +I+GLA HGH
Sbjct: 211 HKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGH 270
Query: 326 GYAALKLFGYMK 337
G AL LF MK
Sbjct: 271 GTEALNLFHEMK 282
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 135/279 (48%), Gaps = 45/279 (16%)
Query: 83 RHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMM 142
R I + +I+ Y + +A +F+ MP +D+++WN++L+ YA+ G+ME +F M
Sbjct: 88 RDIVLWNTMISGYIEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDM 147
Query: 143 PLKDLSSFNILISGYSSCGEVLAARSIFDKMAIKDIVSWNS-----ILSACTRAG----- 192
P +++ S+N LI GY+ G V F +M + V N +LSAC + G
Sbjct: 148 PERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFG 207
Query: 193 ------------------------DM-------EKAFALFQEMPMKNTISWNTMLAGCLQ 221
DM E A +F+ + ++ ISWNTM+ G
Sbjct: 208 KWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAA 267
Query: 222 RGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHV 281
G +EA++LF EMK + PD +T VL AC H+G +E G+ + ++++ + P +
Sbjct: 268 HGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLA-YFNSMFTDFSIMPEI 326
Query: 282 T--TALMDMYAKCGSIEQALQIFFKAQVK-DIYCWNAII 317
++D+ ++ G + QA++ K VK D W ++
Sbjct: 327 EHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLL 365
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 101/220 (45%), Gaps = 12/220 (5%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADN-YTFPILLKAAGKNCASRI 68
MP V WN +IK + G + + ++ M G N T ++L A K A
Sbjct: 147 MPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDF 206
Query: 69 GFAFHGQTIKTGFYR-HIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYA 127
G H G+ + + V+ ALI+MYG A ++F+ + +DL++WN+M++ A
Sbjct: 207 GKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLA 266
Query: 128 SNGEMEDAISLFHMMPLKDLSSFNILISGY----SSCGEVLAARSIFDKM-----AIKDI 178
++G +A++LFH M +S + G G V + F+ M + +I
Sbjct: 267 AHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEI 326
Query: 179 VSWNSILSACTRAGDMEKAFALFQEMPMK-NTISWNTMLA 217
++ +RAG + +A +MP+K + + W T+L
Sbjct: 327 EHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLG 366
>AT1G74630.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28030521-28032452 FORWARD
Length = 643
Score = 186 bits (472), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 109/336 (32%), Positives = 170/336 (50%), Gaps = 36/336 (10%)
Query: 3 LLVCNCFMPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFR-ADNYTFPILLKAAG 61
LL+C P + +N +++ + +V +V M GF D+++F ++KA
Sbjct: 61 LLLC---FPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVE 117
Query: 62 KNCASRIGFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNS 121
+ R GF H Q +K G H+FV T LI MYG C A K+F+ M +LVAW
Sbjct: 118 NFRSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAW-- 175
Query: 122 MLDAYASNGEMEDAISLFHMMPLKDLSSFNILISGYSSCGEVLAARSIFDKMAIKDIVSW 181
N +I+ +V AR IFDKM +++ SW
Sbjct: 176 -----------------------------NAVITACFRGNDVAGAREIFDKMLVRNHTSW 206
Query: 182 NSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCL 241
N +L+ +AG++E A +F EMP ++ +SW+TM+ G G F+E+ F E++
Sbjct: 207 NVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMS 266
Query: 242 PDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQI 301
P+ ++ T VLSAC+ GS E G +H + +G + V AL+DMY++CG++ A +
Sbjct: 267 PNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLV 326
Query: 302 FFKAQVKD-IYCWNAIISGLALHGHGYAALKLFGYM 336
F Q K I W ++I+GLA+HG G A++LF M
Sbjct: 327 FEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEM 362
>AT4G18840.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:10338719-10340356 REVERSE
Length = 545
Score = 186 bits (472), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 105/319 (32%), Positives = 165/319 (51%), Gaps = 32/319 (10%)
Query: 19 NEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTIK 78
N +I+ + E A+ + M + D Y+F +LKA C G HG IK
Sbjct: 109 NSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIK 168
Query: 79 TGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAISL 138
+G +FV+ L+N+ Y +G E A +
Sbjct: 169 SGLVTDVFVENTLVNV-------------------------------YGRSGYFEIARKV 197
Query: 139 FHMMPLKDLSSFNILISGYSSCGEVLAARSIFDKMAIKDIVSWNSILSACTRAGDMEKAF 198
MP++D S+N L+S Y G V AR++FD+M +++ SWN ++S AG +++A
Sbjct: 198 LDRMPVRDAVSWNSLLSAYLEKGLVDEARALFDEMEERNVESWNFMISGYAAAGLVKEAK 257
Query: 199 ALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEM-KTTNCLPDYLTATSVLSACAHL 257
+F MP+++ +SWN M+ G ++E +++F++M + PD T SVLSACA L
Sbjct: 258 EVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASL 317
Query: 258 GSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAII 317
GSL G +HVY G+ + TAL+DMY+KCG I++AL++F +D+ WN+II
Sbjct: 318 GSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSII 377
Query: 318 SGLALHGHGYAALKLFGYM 336
S L++HG G AL++F M
Sbjct: 378 SDLSVHGLGKDALEIFSEM 396
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 64/142 (45%)
Query: 197 AFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAH 256
A ++ + N + N+++ A+ +F EM PD + T VL ACA
Sbjct: 93 AHSILNRIGSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAA 152
Query: 257 LGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAI 316
E G +IH I SGL + V L+++Y + G E A ++ + V+D WN++
Sbjct: 153 FCGFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSL 212
Query: 317 ISGLALHGHGYAALKLFGYMKK 338
+S G A LF M++
Sbjct: 213 LSAYLEKGLVDEARALFDEMEE 234
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 65/297 (21%), Positives = 116/297 (39%), Gaps = 37/297 (12%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNM-QVHGFRADNYTFPILLKAAGKNCASRI 68
MP +V WN ++ + VG + + + M + D +T +L A +
Sbjct: 263 MPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQ 322
Query: 69 GFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYAS 128
G H K G F+ TAL++MY A ++F +D+ WNS++ +
Sbjct: 323 GEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSV 382
Query: 129 NGEMEDAISLFHMMPLKDLSSFNILISGYSSCGEVLAARSIFDKMAIKDIVSWNSILSAC 188
+G +DA+ +F M + G+ G +++ +LSAC
Sbjct: 383 HGLGKDALEIFSEM----------VYEGFKPNG-----------------ITFIGVLSAC 415
Query: 189 TRAGDMEKAFALFQEMPMKNTISWNTMLAGCL-----QRGQFSEAVDLFDEMKTTNCLPD 243
G +++A LF+ M + GC+ + G+ EA +L +E+
Sbjct: 416 NHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPADEA--- 472
Query: 244 YLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQ 300
+ S+L AC G LE +I + L S + ++YA G E+ +
Sbjct: 473 SILLESLLGACKRFGQLEQAERIANRLLELNLRDSSGYAQ-MSNLYASDGRWEKVID 528
>AT5G16860.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:5543834-5546386 FORWARD
Length = 850
Score = 184 bits (466), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 117/382 (30%), Positives = 192/382 (50%), Gaps = 54/382 (14%)
Query: 9 FMPS-LEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASR 67
F PS V WN +I+ + G A + + + M + DNYTFP + KA G+ + R
Sbjct: 85 FPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVR 144
Query: 68 IGFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYA 127
G + H ++ TGF ++FV AL+ MY +DA K+F+ M V D+V+WNS++++YA
Sbjct: 145 CGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYA 204
Query: 128 SNGEME-----------------DAISLFHMMPL----------KDLSSF---------- 150
G+ + D I+L +++P K L F
Sbjct: 205 KLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNM 264
Query: 151 ---NILISGYSSCGEVLAARSIFDKMAIKDIVSWNSILSACTRAGDMEKAFALFQEMPMK 207
N L+ Y+ CG + A ++F M++KD+VSWN++++ ++ G E A LF++M +
Sbjct: 265 FVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEE 324
Query: 208 ----NTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETG 263
+ ++W+ ++G QRG EA+ + +M ++ P+ +T SVLS CA +G+L G
Sbjct: 325 KIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHG 384
Query: 264 IKIHVYAI-------YSGLASSPHVTTALMDMYAKCGSIEQALQIF--FKAQVKDIYCWN 314
+IH YAI +G V L+DMYAKC ++ A +F + +D+ W
Sbjct: 385 KEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWT 444
Query: 315 AIISGLALHGHGYAALKLFGYM 336
+I G + HG AL+L M
Sbjct: 445 VMIGGYSQHGDANKALELLSEM 466
Score = 151 bits (381), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 109/385 (28%), Positives = 175/385 (45%), Gaps = 56/385 (14%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVH-GFRADNYTFPILLKAAGKNCASRI 68
M +V WN II+ + +G + A+ + M G R DN T +L +
Sbjct: 188 MSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSL 247
Query: 69 GFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYAS 128
G H + + +++FV L++MY +A +F NM VKD+V+WN+M+ Y+
Sbjct: 248 GKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQ 307
Query: 129 NGEMEDAISLFHMMPLK----DLSSFNILISGYSSCGEVLAARSIFDKMAIKDI----VS 180
G EDA+ LF M + D+ +++ ISGY+ G A + +M I V+
Sbjct: 308 IGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVT 367
Query: 181 WNSILSACTRAG-----------------DMEK-------------------------AF 198
S+LS C G D+ K A
Sbjct: 368 LISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTAR 427
Query: 199 ALFQEMPMK--NTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNC--LPDYLTATSVLSAC 254
A+F + K + ++W M+ G Q G ++A++L EM +C P+ T + L AC
Sbjct: 428 AMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVAC 487
Query: 255 AHLGSLETGIKIHVYAIYSGLASSP-HVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCW 313
A L +L G +IH YA+ + + P V+ L+DMYAKCGSI A +F K+ W
Sbjct: 488 ASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTW 547
Query: 314 NAIISGLALHGHGYAALKLFGYMKK 338
++++G +HG+G AL +F M++
Sbjct: 548 TSLMTGYGMHGYGEEALGIFDEMRR 572
Score = 124 bits (311), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 156/326 (47%), Gaps = 16/326 (4%)
Query: 24 KHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTIKTGFYR 83
+ +L+ NA Y+ + + A T P + K + I H + + G
Sbjct: 3 RRLLIPNAAAKSHQYIKVSLFSTSAPEITPPFIHKCKTISQVKLI----HQKLLSFGILT 58
Query: 84 HIFVQTALINMYGTLHCTADACKMFENMPVKD--LVAWNSMLDAYASNGEMEDAISLFHM 141
+ + + LI+ Y ++ C + A + P D + WNS++ +Y NG + LF +
Sbjct: 59 -LNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGL 117
Query: 142 MPLKDLSSFNILIS-GYSSCGEVLAARSIFDKMA-------IKDIVSWNSILSACTRAGD 193
M + N + +CGE+ + R A I ++ N++++ +R
Sbjct: 118 MHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRS 177
Query: 194 MEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTT-NCLPDYLTATSVLS 252
+ A +F EM + + +SWN+++ + G+ A+++F M C PD +T +VL
Sbjct: 178 LSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLP 237
Query: 253 ACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYC 312
CA LG+ G ++H +A+ S + + V L+DMYAKCG +++A +F VKD+
Sbjct: 238 PCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVS 297
Query: 313 WNAIISGLALHGHGYAALKLFGYMKK 338
WNA+++G + G A++LF M++
Sbjct: 298 WNAMVAGYSQIGRFEDAVRLFEKMQE 323
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 151/351 (43%), Gaps = 36/351 (10%)
Query: 13 LEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAF 72
++V W+ I + G +A+ M G + + T +L CAS +G
Sbjct: 328 MDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSG----CAS-VGALM 382
Query: 73 HGQTI------------KTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVK--DLVA 118
HG+ I K G V LI+MY A MF+++ K D+V
Sbjct: 383 HGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVT 442
Query: 119 WNSMLDAYASNGEMEDAISLFHMMPLKDL----SSFNI---LISGYS----SCGEVLAAR 167
W M+ Y+ +G+ A+ L M +D ++F I L++ S G+ + A
Sbjct: 443 WTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAY 502
Query: 168 SIFDKMAIKDIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSE 227
++ ++ + N ++ + G + A +F M KN ++W +++ G G E
Sbjct: 503 ALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEE 562
Query: 228 AVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIK-IHVYAIYSGLASSPHVTTALM 286
A+ +FDEM+ D +T VL AC+H G ++ G++ + G++ P L+
Sbjct: 563 ALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLV 622
Query: 287 DMYAKCGSIEQALQIFFKAQVK-DIYCWNAIISGLALHGH----GYAALKL 332
D+ + G + AL++ + ++ W A +S +HG YAA K+
Sbjct: 623 DLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKI 673
>AT2G34400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:14516238-14518186 FORWARD
Length = 617
Score = 174 bits (441), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 103/316 (32%), Positives = 163/316 (51%), Gaps = 10/316 (3%)
Query: 30 NAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTIKTGFYRHIFVQT 89
+ E A+ Y M+ G + D +T+ + A K +G + H K G R + +
Sbjct: 108 DHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINH 167
Query: 90 ALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMPLK---- 145
+LI MY A K+F+ + +D V+WNSM+ Y+ G +DA+ LF M +
Sbjct: 168 SLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEP 227
Query: 146 DLSSFNILISGYSSCGEVLAARSIFDKMAIKDIVSWNSIL-----SACTRAGDMEKAFAL 200
D + ++ S G++ R + ++MAI + ++ L S + GD++ A +
Sbjct: 228 DERTLVSMLGACSHLGDLRTGR-LLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRV 286
Query: 201 FQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSL 260
F +M K+ ++W M+ Q G+ SEA LF EM+ T PD T ++VLSAC +G+L
Sbjct: 287 FNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGAL 346
Query: 261 ETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGL 320
E G +I +A L + +V T L+DMY KCG +E+AL++F VK+ WNA+I+
Sbjct: 347 ELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAY 406
Query: 321 ALHGHGYAALKLFGYM 336
A GH AL LF M
Sbjct: 407 AHQGHAKEALLLFDRM 422
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 133/292 (45%), Gaps = 12/292 (4%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTI 77
WN +I + G A+ A+ + M+ GF D T +L A R G I
Sbjct: 197 WNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAI 256
Query: 78 KTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAIS 137
F+ + LI+MYG A ++F M KD VAW +M+ Y+ NG+ +A
Sbjct: 257 TKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFK 316
Query: 138 LFHMMPL----KDLSSFNILISGYSSCGEVLAARSI---FDKMAIK-DIVSWNSILSACT 189
LF M D + + ++S S G + + I +++++ +I ++
Sbjct: 317 LFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYG 376
Query: 190 RAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATS 249
+ G +E+A +F+ MP+KN +WN M+ +G EA+ LFD M P +T
Sbjct: 377 KCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRMSVP---PSDITFIG 433
Query: 250 VLSACAHLGSLETGIK-IHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQ 300
VLSAC H G + G + H + GL T ++D+ ++ G +++A +
Sbjct: 434 VLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWE 485
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 110/214 (51%), Gaps = 8/214 (3%)
Query: 133 EDAISLFHMMPLKDLS----SFNILISGYSSCGEVLAARSI----FDKMAIKDIVSWNSI 184
E A+SL+ M L ++N + + E+ RS+ F +D+ +S+
Sbjct: 110 EAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSL 169
Query: 185 LSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDY 244
+ + G + A LF E+ ++T+SWN+M++G + G +A+DLF +M+ PD
Sbjct: 170 IMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDE 229
Query: 245 LTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFK 304
T S+L AC+HLG L TG + AI + S + + L+ MY KCG ++ A ++F +
Sbjct: 230 RTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQ 289
Query: 305 AQVKDIYCWNAIISGLALHGHGYAALKLFGYMKK 338
KD W A+I+ + +G A KLF M+K
Sbjct: 290 MIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEK 323
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 115/246 (46%), Gaps = 12/246 (4%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTI 77
W +I + G + +A + M+ G D T +L A G A +G
Sbjct: 298 WTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHAS 357
Query: 78 KTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAIS 137
+ +I+V T L++MYG +A ++FE MPVK+ WN+M+ AYA G ++A+
Sbjct: 358 ELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALL 417
Query: 138 LFHMM--PLKDLSSFNILISGYSSCGEVLAARSIFDKMA-----IKDIVSWNSILSACTR 190
LF M P D++ +L S G V F +M+ + I + +I+ +R
Sbjct: 418 LFDRMSVPPSDITFIGVL-SACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSR 476
Query: 191 AGDMEKAFALFQEMPMK-NTISWNTMLAGCLQRGQFS---EAVDLFDEMKTTNCLPDYLT 246
AG +++A+ + P K + I +L C +R + +A+ + EMK +Y+
Sbjct: 477 AGMLDEAWEFMERFPGKPDEIMLAAILGACHKRKDVAIREKAMRMLMEMKEAKNAGNYVI 536
Query: 247 ATSVLS 252
+++VL+
Sbjct: 537 SSNVLA 542
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 81/180 (45%), Gaps = 1/180 (0%)
Query: 160 CGEVLAARSIFDKMAIKDIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGC 219
C V R I +M + + N ++ GD + LF N S+N M+ G
Sbjct: 43 CISVNQLRQIQAQMLLHSVEKPNFLIPKAVELGDFNYSSFLFSVTEEPNHYSFNYMIRGL 102
Query: 220 LQRGQFSE-AVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASS 278
E A+ L+ MK + PD T V ACA L + G +H GL
Sbjct: 103 TNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERD 162
Query: 279 PHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMKK 338
H+ +L+ MYAKCG + A ++F + +D WN++ISG + G+ A+ LF M++
Sbjct: 163 VHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEE 222
>AT2G35030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:14761080-14762963 REVERSE
Length = 627
Score = 173 bits (439), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 86/239 (35%), Positives = 144/239 (60%), Gaps = 3/239 (1%)
Query: 103 DACKMFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMPLKDLSSFNILISGYSSCGE 162
+A +FE MP +D+V+W +M+D A NG++++A LF MP +++ S+N +I+GY+
Sbjct: 189 EAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNR 248
Query: 163 VLAARSIFDKMAIKDIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQR 222
+ A +F M +D SWN++++ R +M KA LF MP KN ISW TM+ G ++
Sbjct: 249 IDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVEN 308
Query: 223 GQFSEAVDLFDEM-KTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHV 281
+ EA+++F +M + + P+ T S+LSAC+ L L G +IH S + V
Sbjct: 309 KENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIV 368
Query: 282 TTALMDMYAKCGSIEQALQIFFKAQV--KDIYCWNAIISGLALHGHGYAALKLFGYMKK 338
T+AL++MY+K G + A ++F V +D+ WN++I+ A HGHG A++++ M+K
Sbjct: 369 TSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRK 427
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 127/236 (53%), Gaps = 9/236 (3%)
Query: 102 ADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMM-PLKDLSSFNILISGYSSC 160
A+A K+F+ +P +D+V W ++ Y G+M +A LF + K++ ++ ++SGY
Sbjct: 63 AEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVTWTAMVSGYLRS 122
Query: 161 GEVLAARSIFDKMAIKDIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCL 220
++ A +F +M +++VSWN+++ ++G ++KA LF EMP +N +SWN+M+ +
Sbjct: 123 KQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALV 182
Query: 221 QRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPH 280
QRG+ EA++LF+ M D ++ T+++ A G ++ ++ + S
Sbjct: 183 QRGRIDEAMNLFERMPRR----DVVSWTAMVDGLAKNGKVDEARRLFDCMPERNIIS--- 235
Query: 281 VTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYM 336
A++ YA+ I++A Q+F +D WN +I+G + A LF M
Sbjct: 236 -WNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRM 290
Score = 119 bits (297), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 118/208 (56%), Gaps = 9/208 (4%)
Query: 130 GEMEDAISLFHMMPLKDLSSFNILISGYSSCGEVLAARSIFDKM-AIKDIVSWNSILSAC 188
G++ +A LF +P +D+ ++ +I+GY G++ AR +FD++ + K++V+W +++S
Sbjct: 60 GKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVTWTAMVSGY 119
Query: 189 TRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTAT 248
R+ + A LFQEMP +N +SWNTM+ G Q G+ +A++LFDEM N ++
Sbjct: 120 LRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNI----VSWN 175
Query: 249 SVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVK 308
S++ A G ++ + + + S TA++D AK G +++A ++F +
Sbjct: 176 SMVKALVQRGRIDEAMNLFERMPRRDVVS----WTAMVDGLAKNGKVDEARRLFDCMPER 231
Query: 309 DIYCWNAIISGLALHGHGYAALKLFGYM 336
+I WNA+I+G A + A +LF M
Sbjct: 232 NIISWNAMITGYAQNNRIDEADQLFQVM 259
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 129/260 (49%), Gaps = 19/260 (7%)
Query: 83 RHIFVQTALINMYGTLHCTADACKMFENMPV-KDLVAWNSMLDAYASNGEMEDAISLFHM 141
R + T +I Y L +A ++F+ + K++V W +M+ Y + ++ A LF
Sbjct: 75 RDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVTWTAMVSGYLRSKQLSIAEMLFQE 134
Query: 142 MPLKDLSSFNILISGYSSCGEVLAARSIFDKMAIKDIVSWNSILSACTRAGDMEKAFALF 201
MP +++ S+N +I GY+ G + A +FD+M ++IVSWNS++ A + G +++A LF
Sbjct: 135 MPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLF 194
Query: 202 QEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDY--LTATSVLSACAHLGS 259
+ MP ++ +SW M+ G + G+ EA LFD C+P+ ++ ++++ A
Sbjct: 195 ERMPRRDVVSWTAMVDGLAKNGKVDEARRLFD------CMPERNIISWNAMITGYAQNNR 248
Query: 260 LETGIKIHVYAIYSGLASSPHVTTALM---DMYAKCGSIEQALQIFFKAQVKDIYCWNAI 316
++ ++ AS + T + +M CG +F + K++ W +
Sbjct: 249 IDEADQLFQVMPERDFASWNTMITGFIRNREMNKACG-------LFDRMPEKNVISWTTM 301
Query: 317 ISGLALHGHGYAALKLFGYM 336
I+G + AL +F M
Sbjct: 302 ITGYVENKENEEALNVFSKM 321
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 149/330 (45%), Gaps = 51/330 (15%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
MP + WN ++K + G ++A+ + M R D ++ ++ KN ++
Sbjct: 166 MPERNIVSWNSMVKALVQRGRIDEAMNLFERMP----RRDVVSWTAMVDGLAKN--GKVD 219
Query: 70 FAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASN 129
A + R+I A+I Y + +A ++F+ MP +D +WN+M+ + N
Sbjct: 220 EA--RRLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRN 277
Query: 130 GEMEDAISLFHMMPLKDLSSFNILISGYSSCGEVLAARSIFDKM----AIK-DIVSWNSI 184
EM A LF MP K++ S+ +I+GY E A ++F KM ++K ++ ++ SI
Sbjct: 278 REMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSI 337
Query: 185 LSACT-----------------------------------RAGDMEKAFALFQE--MPMK 207
LSAC+ ++G++ A +F + +
Sbjct: 338 LSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQR 397
Query: 208 NTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIH 267
+ ISWN+M+A G EA++++++M+ P +T ++L AC+H G +E G++
Sbjct: 398 DLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFF 457
Query: 268 VYAIY-SGLASSPHVTTALMDMYAKCGSIE 296
+ L T L+D+ + G ++
Sbjct: 458 KDLVRDESLPLREEHYTCLVDLCGRAGRLK 487
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 81/187 (43%), Gaps = 40/187 (21%)
Query: 153 LISGYSSCGEVLAARSIFDKMAIKDIVSWNSILSACTRAGDMEKAFALFQEM-PMKNTIS 211
LI G++ AR +FD + +D+V+W +++ + GDM +A LF + KN ++
Sbjct: 52 LIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVT 111
Query: 212 WNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAI 271
W M++G L+ Q S A LF EM N +
Sbjct: 112 WTAMVSGYLRSKQLSIAEMLFQEMPERNVVS----------------------------- 142
Query: 272 YSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALK 331
++D YA+ G I++AL++F + ++I WN+++ L G A+
Sbjct: 143 ----------WNTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMN 192
Query: 332 LFGYMKK 338
LF M +
Sbjct: 193 LFERMPR 199
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 73/317 (23%), Positives = 131/317 (41%), Gaps = 49/317 (15%)
Query: 6 CNCF--MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNY-TFPILLKAAGK 62
C F MP V W +I ++ E+A+ + M G N T+ +L A
Sbjct: 284 CGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSD 343
Query: 63 NCASRIGFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPV--KDLVAWN 120
G H K+ ++ V +AL+NMY A KMF+N V +DL++WN
Sbjct: 344 LAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWN 403
Query: 121 SMLDAYASNGEMEDAISLFHMMPLKDLSSFNILISGYSSCGEVLAARSIFDKMAIKDIVS 180
SM+ YA +G ++AI +++ M G+ V+
Sbjct: 404 SMIAVYAHHGHGKEAIEMYNQMRK----------HGFKPSA-----------------VT 436
Query: 181 WNSILSACTRAGDMEKAFALFQEMPMKNTIS-----WNTMLAGCLQRGQFSEAVDLFDEM 235
+ ++L AC+ AG +EK F+++ ++ + ++ C + G+ + +
Sbjct: 437 YLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCGRAGRLKDVTNFI--- 493
Query: 236 KTTNCLPDYLTAT---SVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALM-DMYAK 291
NC L+ + ++LSAC + ++ + +G S T LM ++YA
Sbjct: 494 ---NCDDARLSRSFYGAILSACNVHNEVSIAKEVVKKVLETG--SDDAGTYVLMSNIYAA 548
Query: 292 CGSIEQALQIFFKAQVK 308
G E+A ++ K + K
Sbjct: 549 NGKREEAAEMRMKMKEK 565
>AT4G33990.1 | Symbols: EMB2758 | EMB2758 (embryo defective 2758) |
chr4:16290141-16292612 REVERSE
Length = 823
Score = 172 bits (437), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 115/338 (34%), Positives = 176/338 (52%), Gaps = 16/338 (4%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRA-DNYTFPILLKAAGKNCASRI 68
MP ++ WN +I + GNA++A LT N G RA D+ T LL A +
Sbjct: 211 MPVRDMGSWNAMISGYCQSGNAKEA-LTLSN----GLRAMDSVTVVSLLSACTEAGDFNR 265
Query: 69 GFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYAS 128
G H +IK G +FV LI++Y D K+F+ M V+DL++WNS++ AY
Sbjct: 266 GVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYEL 325
Query: 129 NGEMEDAISLFHMMPLK----DLSSFNILISGYSSCGEVLAARSI-----FDKMAIKDIV 179
N + AISLF M L D + L S S G++ A RS+ ++DI
Sbjct: 326 NEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDIT 385
Query: 180 SWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTN 239
N+++ + G ++ A A+F +P + ISWNT+++G Q G SEA+++++ M+
Sbjct: 386 IGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEG 445
Query: 240 CLP-DYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQA 298
+ + T SVL AC+ G+L G+K+H + +GL V T+L DMY KCG +E A
Sbjct: 446 EIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDA 505
Query: 299 LQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYM 336
L +F++ + WN +I+ HGHG A+ LF M
Sbjct: 506 LSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEM 543
Score = 125 bits (314), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 94/363 (25%), Positives = 161/363 (44%), Gaps = 73/363 (20%)
Query: 14 EVRRWNEIIKKHMLVGNAEQAVLTY-VNMQVHGFRADNYTFPILLKAAGKNCASRI-GFA 71
+V WN +I + GN+ + + + + M G D TFP +LKA C + I G
Sbjct: 116 DVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKA----CRTVIDGNK 171
Query: 72 FHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGE 131
H +K GF ++V +LI++Y +A +F+ MPV+D+ +WN+M+ Y +G
Sbjct: 172 IHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGN 231
Query: 132 MEDAISL------------------------------FHMMPLK-----DLSSFNILISG 156
++A++L H +K +L N LI
Sbjct: 232 AKEALTLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDL 291
Query: 157 YSSCGEVLAARSIFDKMAIKDIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTML 216
Y+ G + + +FD+M ++D++SWNSI+ KA+ L E P++
Sbjct: 292 YAEFGRLRDCQKVFDRMYVRDLISWNSII----------KAYEL-NEQPLR--------- 331
Query: 217 AGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSG-L 275
A+ LF EM+ + PD LT S+ S + LG + + + + G
Sbjct: 332 -----------AISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWF 380
Query: 276 ASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGY 335
+ A++ MYAK G ++ A +F D+ WN IISG A +G A++++
Sbjct: 381 LEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNI 440
Query: 336 MKK 338
M++
Sbjct: 441 MEE 443
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 135/277 (48%), Gaps = 20/277 (7%)
Query: 72 FHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGE 131
H + + + +++ + L+N+Y L A A F+++ +D+ AWN M+ Y G
Sbjct: 73 LHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGN 132
Query: 132 MEDAISLFHMMPLKDLSSFNILISGYSSCGEVLAA-RSIFDK-----MAIKDIVSWN--- 182
+ I F + L + L Y + VL A R++ D +A+K W+
Sbjct: 133 SSEVIRCFSLFMLS-----SGLTPDYRTFPSVLKACRTVIDGNKIHCLALKFGFMWDVYV 187
Query: 183 --SILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNC 240
S++ +R + A LF EMP+++ SWN M++G Q G EA+ L + ++
Sbjct: 188 AASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAM-- 245
Query: 241 LPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQ 300
D +T S+LSAC G G+ IH Y+I GL S V+ L+D+YA+ G + +
Sbjct: 246 --DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQK 303
Query: 301 IFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMK 337
+F + V+D+ WN+II L+ A+ LF M+
Sbjct: 304 VFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMR 340
Score = 117 bits (294), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 149/320 (46%), Gaps = 12/320 (3%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTI 77
WN IIK + L +A+ + M++ + D T L + R + G T+
Sbjct: 316 WNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTL 375
Query: 78 KTG-FYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAI 136
+ G F I + A++ MY L A +F +P D+++WN+++ YA NG +AI
Sbjct: 376 RKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAI 435
Query: 137 SLFHMMPLKDLSSFN--ILISGYSSCGEVLAARS-------IFDKMAIKDIVSWNSILSA 187
++++M + + N +S +C + A R + D+ S+
Sbjct: 436 EMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADM 495
Query: 188 CTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTA 247
+ G +E A +LF ++P N++ WNT++A G +AV LF EM PD++T
Sbjct: 496 YGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITF 555
Query: 248 TSVLSACAHLGSLETGIK-IHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQ 306
++LSAC+H G ++ G + G+ S ++DMY + G +E AL+
Sbjct: 556 VTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMS 615
Query: 307 VK-DIYCWNAIISGLALHGH 325
++ D W A++S +HG+
Sbjct: 616 LQPDASIWGALLSACRVHGN 635
>AT3G21470.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:7563746-7565074 FORWARD
Length = 442
Score = 172 bits (436), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 93/285 (32%), Positives = 154/285 (54%), Gaps = 34/285 (11%)
Query: 87 VQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNG---------------- 130
V ++LI+MYG C A K+F+ MP +++ WN+M+ Y SNG
Sbjct: 2 VGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGLFEEISVCR 61
Query: 131 ----------------EMEDAISLFHMMP--LKDLSSFNILISGYSSCGEVLAARSIFDK 172
E+E A LF MP LK++ ++++++ Y + ++ AR F+
Sbjct: 62 NTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWSVMLGVYVNNRKMEDARKFFED 121
Query: 173 MAIKDIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLF 232
+ K+ W+ ++S R GD+ +A A+F + ++ + WNT++AG Q G +A+D F
Sbjct: 122 IPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAF 181
Query: 233 DEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKC 292
M+ PD +T +S+LSACA G L+ G ++H + G+ + V+ AL+DMYAKC
Sbjct: 182 FNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKC 241
Query: 293 GSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMK 337
G +E A +F V+ + C N++IS LA+HG G AL++F M+
Sbjct: 242 GDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTME 286
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 126/281 (44%), Gaps = 12/281 (4%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTI 77
WN +I + G ++ A+ + NMQ G+ D T +L A ++ +G H
Sbjct: 161 WNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLIN 220
Query: 78 KTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAIS 137
G + FV ALI+MY +A +FE++ V+ + NSM+ A +G+ ++A+
Sbjct: 221 HRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALE 280
Query: 138 LFHMMPLKDLSSFNI-LISGYSSC---GEVLAARSIFDKMAIKDIVS----WNSILSACT 189
+F M DL I I+ ++C G ++ IF +M +D+ + ++
Sbjct: 281 MFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQDVKPNVKHFGCLIHLLG 340
Query: 190 RAGDMEKAFALFQEMPMK-NTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTAT 248
R+G +++A+ L +EM +K N +L C A + ++T + + +
Sbjct: 341 RSGKLKEAYRLVKEMHVKPNDTVLGALLGACKVHMDTEMAEQVMKIIETAGSITNSYSEN 400
Query: 249 ---SVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALM 286
S+ + AH +T + V GL SP +++ ++
Sbjct: 401 HLASISNLYAHTERWQTAEALRVEMEKRGLEKSPGLSSLVL 441
>AT4G22760.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:11958477-11962870 FORWARD
Length = 889
Score = 171 bits (433), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 105/338 (31%), Positives = 171/338 (50%), Gaps = 33/338 (9%)
Query: 32 EQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTIKTGFYRHIFVQTAL 91
++ V Y++M G ++ +L+A GK G H Q +K G ++VQT L
Sbjct: 355 KETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPIHAQALKNGLCGCVYVQTGL 414
Query: 92 INMYGTLHCTA-------------------------------DACKMFENMPVKDLVAWN 120
+ +Y L +A ++F+ +P KD V+WN
Sbjct: 415 VGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEARRVFDKIPEKDAVSWN 474
Query: 121 SMLDAYASNGEMEDAISLFHMMPLKDLSSFNILISGYSSCGEVLAARSIFDKMAIKDIVS 180
++ +YA G+M +A SLF MPLK +S+NILI GY +C E+ AR+ FD M K+ VS
Sbjct: 475 LIISSYAKKGDMGNACSLFSAMPLKSPASWNILIGGYVNCREMKLARTYFDAMPQKNGVS 534
Query: 181 WNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNC 240
W +++S T+ GD++ A LF+ M K+ + ++ M+A Q G+ +A+ LF +M N
Sbjct: 535 WITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNS 594
Query: 241 L--PDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQA 298
PD +T +SV+SA + LG+ G + Y G+ ++T+L+D+Y K G +A
Sbjct: 595 YIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKA 654
Query: 299 LQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYM 336
++F KD ++A+I G ++G A LF M
Sbjct: 655 FKMFSNLNKKDTVSYSAMIMGCGINGMATEANSLFTAM 692
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 114/260 (43%), Gaps = 42/260 (16%)
Query: 108 FENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMPLKDLSSFNILISGYSSCGEVLAAR 167
F+ MP K+ V+W +M+ Y G+++ A LF +M KD ++ +I+ Y+ G+ A
Sbjct: 524 FDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQNGKPKDAL 583
Query: 168 SIF------------DKMAIKDIVSWNSILSACT-------------------------- 189
+F D++ + +VS NS L +
Sbjct: 584 KLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLSTSLID 643
Query: 190 ---RAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLT 246
+ GD KAF +F + K+T+S++ M+ GC G +EA LF M P+ +T
Sbjct: 644 LYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVT 703
Query: 247 ATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQ 306
T +LSA +H G ++ G K L S ++DM + G +E+A ++
Sbjct: 704 FTGLLSAYSHSGLVQEGYKCFNSMKDHNLEPSADHYGIMVDMLGRAGRLEEAYELIKSMP 763
Query: 307 VK-DIYCWNAIISGLALHGH 325
++ + W A++ LH +
Sbjct: 764 MQPNAGVWGALLLASGLHNN 783
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 63/126 (50%)
Query: 208 NTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIH 267
++ SW ++ Q +F E VD++ +M + P TSVL AC + ++ G IH
Sbjct: 337 DSFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPIH 396
Query: 268 VYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGY 327
A+ +GL +V T L+ +Y++ G IE A + F K+ WN+++ G G
Sbjct: 397 AQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELD 456
Query: 328 AALKLF 333
A ++F
Sbjct: 457 EARRVF 462
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 71/151 (47%), Gaps = 10/151 (6%)
Query: 189 TRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTAT 248
+R G +E A F ++ KNT+SWN++L G L+ G+ EA +FD++ D ++
Sbjct: 419 SRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEARRVFDKIPEK----DAVSWN 474
Query: 249 SVLSACAHLGSLETGIKIHVYAIYSGLA-SSPHVTTALMDMYAKCGSIEQALQIFFKAQV 307
++S+ A G + +++S + SP L+ Y C ++ A F
Sbjct: 475 LIISSYAKKGDMGNAC-----SLFSAMPLKSPASWNILIGGYVNCREMKLARTYFDAMPQ 529
Query: 308 KDIYCWNAIISGLALHGHGYAALKLFGYMKK 338
K+ W +ISG G +A +LF M K
Sbjct: 530 KNGVSWITMISGYTKLGDVQSAEELFRLMSK 560
>AT2G13600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:5671493-5673586 FORWARD
Length = 697
Score = 171 bits (433), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 105/374 (28%), Positives = 177/374 (47%), Gaps = 48/374 (12%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKA-AGKNCASRI 68
MP + WN ++ E+A+ + M GF + Y+F +L A +G N ++
Sbjct: 112 MPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNK- 170
Query: 69 GFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYAS 128
G H K+ F +++ +AL++MY DA ++F+ M +++V+WNS++ +
Sbjct: 171 GVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQ 230
Query: 129 NGEMEDAISLFHMM------P----------------------------------LKDLS 148
NG +A+ +F MM P D+
Sbjct: 231 NGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDII 290
Query: 149 SFNILISGYSSCGEVLAARSIFDKMAIKDIVSWNSILSACTRAGDMEKAFALFQEMPMKN 208
N + Y+ C + AR IFD M I+++++ S++S A + A +F +M +N
Sbjct: 291 LSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERN 350
Query: 209 TISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHV 268
+SWN ++AG Q G+ EA+ LF +K + P + + ++L ACA L L G++ HV
Sbjct: 351 VVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHV 410
Query: 269 YAI------YSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLAL 322
+ + SG V +L+DMY KCG +E+ +F K +D WNA+I G A
Sbjct: 411 HVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQ 470
Query: 323 HGHGYAALKLFGYM 336
+G+G AL+LF M
Sbjct: 471 NGYGNEALELFREM 484
Score = 142 bits (357), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 96/329 (29%), Positives = 160/329 (48%), Gaps = 41/329 (12%)
Query: 49 DNYTFPILLKAAGKNCASRIGFAF-HGQTIKTGFYRHIFVQTALINMYGTLHCTADACKM 107
D+ F LL + K+ S I + H IK+GF IF+Q LI+ Y D ++
Sbjct: 18 DSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQV 77
Query: 108 FENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMPLKDLSSFNILISGYSS---CGEVL 164
F+ MP +++ WNS++ G +++A SLF MP +D ++N ++SG++ C E L
Sbjct: 78 FDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEAL 137
Query: 165 AARSIFDKMA-IKDIVSWNSILSACTRAGDMEK--------------------------- 196
++ K + + S+ S+LSAC+ DM K
Sbjct: 138 CYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMY 197
Query: 197 --------AFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTAT 248
A +F EM +N +SWN+++ Q G EA+D+F M + PD +T
Sbjct: 198 SKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLA 257
Query: 249 SVLSACAHLGSLETGIKIHVYAIYSG-LASSPHVTTALMDMYAKCGSIEQALQIFFKAQV 307
SV+SACA L +++ G ++H + + L + ++ A +DMYAKC I++A IF +
Sbjct: 258 SVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPI 317
Query: 308 KDIYCWNAIISGLALHGHGYAALKLFGYM 336
+++ ++ISG A+ AA +F M
Sbjct: 318 RNVIAETSMISGYAMAASTKAARLMFTKM 346
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 93/378 (24%), Positives = 169/378 (44%), Gaps = 56/378 (14%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
M V WN +I G A +A+ + M D T ++ A A ++G
Sbjct: 213 MGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVG 272
Query: 70 FAFHGQTIKTGFYRH-IFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYAS 128
HG+ +K R+ I + A ++MY +A +F++MP+++++A SM+ YA
Sbjct: 273 QEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAM 332
Query: 129 NGEMEDAISLFHMMPLKDLSSFNILISGYSSCGEVLAARSIF---DKMAI---------- 175
+ A +F M +++ S+N LI+GY+ GE A S+F + ++
Sbjct: 333 AASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANI 392
Query: 176 --------------------------------KDIVSWNSILSACTRAGDMEKAFALFQE 203
DI NS++ + G +E+ + +F++
Sbjct: 393 LKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRK 452
Query: 204 MPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETG 263
M ++ +SWN M+ G Q G +EA++LF EM + PD++T VLSAC H G +E G
Sbjct: 453 MMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEG 512
Query: 264 IKIHVYAIYS---GLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVK-DIYCWNAIISG 319
H ++ + G+A T ++D+ + G +E+A + + ++ D W ++++
Sbjct: 513 --RHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAA 570
Query: 320 LALHGH----GYAALKLF 333
+H + Y A KL
Sbjct: 571 CKVHRNITLGKYVAEKLL 588
>AT3G05240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:1493684-1495381 REVERSE
Length = 548
Score = 171 bits (433), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 101/329 (30%), Positives = 164/329 (49%), Gaps = 5/329 (1%)
Query: 11 PSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGF 70
PS+ + WN +I+ + N ++A++ Y M G+ D +TFP +LKA + G
Sbjct: 70 PSVYI--WNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGS 127
Query: 71 AFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNG 130
HG +KTGF +++V T L++MY ++FE++P ++VAW S++ + +N
Sbjct: 128 CVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNN 187
Query: 131 EMEDAISLFHMMPLKDL-SSFNILISGYSSCGEVLAARSIFDKMAIKDIVSWNSILSACT 189
DAI F M + ++ I++ +CG F +++ S++
Sbjct: 188 RFSDAIEAFREMQSNGVKANETIMVDLLVACGRCFDP--YFQSKVGFNVILATSLIDMYA 245
Query: 190 RAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATS 249
+ GD+ A LF MP + +SWN+++ G Q G EA+ +F +M PD +T S
Sbjct: 246 KCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLS 305
Query: 250 VLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKD 309
V+ A G + G IH Y +G + AL++MYAK G E A + F + KD
Sbjct: 306 VIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKD 365
Query: 310 IYCWNAIISGLALHGHGYAALKLFGYMKK 338
W +I GLA HGHG AL +F M++
Sbjct: 366 TIAWTVVIIGLASHGHGNEALSIFQRMQE 394
Score = 114 bits (286), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 159/326 (48%), Gaps = 22/326 (6%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
+P V W +I + A+ + MQ +G +A+ LL A G+ C
Sbjct: 168 IPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGR-C----- 221
Query: 70 FAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASN 129
F + Q+ K GF ++ + T+LI+MY A +F+ MP + LV+WNS++ Y+ N
Sbjct: 222 FDPYFQS-KVGF--NVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQN 278
Query: 130 GEMEDAISLF-HMMPL---KDLSSF-----NILISGYSSCGEVLAARSIFDKMAIKDIVS 180
G+ E+A+ +F M+ L D +F +I G S G+ + A + +KD
Sbjct: 279 GDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAY-VSKTGFVKDAAI 337
Query: 181 WNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTT-N 239
++++ + GD E A F+++ K+TI+W ++ G G +EA+ +F M+ N
Sbjct: 338 VCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGN 397
Query: 240 CLPDYLTATSVLSACAHLGSLETGIKIHV-YAIYSGLASSPHVTTALMDMYAKCGSIEQA 298
PD +T VL AC+H+G +E G + GL + ++D+ ++ G E+A
Sbjct: 398 ATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEA 457
Query: 299 LQIFFKAQVK-DIYCWNAIISGLALH 323
++ VK ++ W A+++G +H
Sbjct: 458 ERLVKTMPVKPNVNIWGALLNGCDIH 483
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 120/247 (48%), Gaps = 15/247 (6%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
MP + WN II + G+AE+A+ +++M G D TF +++A+ S++G
Sbjct: 260 MPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLG 319
Query: 70 FAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASN 129
+ H KTGF + + AL+NMY A K FE++ KD +AW ++ AS+
Sbjct: 320 QSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASH 379
Query: 130 GEMEDAISLFHMMPLK-----DLSSFNILISGYSSCGEVLAARSIFDKM----AIKDIVS 180
G +A+S+F M K D ++ ++ S G V + F +M ++ V
Sbjct: 380 GHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVE 439
Query: 181 -WNSILSACTRAGDMEKAFALFQEMPMKNTIS-WNTMLAGCLQRGQFSEAVDLFDEMKTT 238
+ ++ +RAG E+A L + MP+K ++ W +L GC E ++L D +++
Sbjct: 440 HYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNGC----DIHENLELTDRIRSM 495
Query: 239 NCLPDYL 245
P+ L
Sbjct: 496 VAEPEEL 502
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 81/166 (48%), Gaps = 3/166 (1%)
Query: 175 IKDIVSWNSILSACT---RAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDL 231
I++++ + ++ CT ++ A ++F+ + + WN+M+ G +A+
Sbjct: 35 IRNVIPLSRLIDFCTTCPETMNLSYARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIF 94
Query: 232 FDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAK 291
+ EM PDY T VL AC+ L ++ G +H + + +G + +V+T L+ MY
Sbjct: 95 YQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMC 154
Query: 292 CGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMK 337
CG + L++F ++ W ++ISG + A++ F M+
Sbjct: 155 CGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQ 200
>AT5G27110.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:9538572-9540647 REVERSE
Length = 691
Score = 170 bits (430), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 101/337 (29%), Positives = 169/337 (50%), Gaps = 8/337 (2%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
MP +V WN +I G AE+A+ + M+ GF ++ + + + A + G
Sbjct: 168 MPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERG 227
Query: 70 FAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASN 129
H + +K GF +V +AL++MYG C A ++F+ MP K LVAWNSM+ Y +
Sbjct: 228 KEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAK 287
Query: 130 GEMEDAISLFHMMPLKDLS-SFNILISGYSSCGEV--LAARSIFDKMAIKDIVSWN---- 182
G+ + + + + M ++ S L S +C L I+ +V+ +
Sbjct: 288 GDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVN 347
Query: 183 -SILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCL 241
S++ + G+ A +F + SWN M++ + G + +AV+++D+M +
Sbjct: 348 CSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVK 407
Query: 242 PDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQI 301
PD +T TSVL AC+ L +LE G +IH+ S L + + +AL+DMY+KCG+ ++A +I
Sbjct: 408 PDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRI 467
Query: 302 FFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMKK 338
F KD+ W +IS HG AL F M+K
Sbjct: 468 FNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQK 504
Score = 137 bits (346), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 149/296 (50%), Gaps = 8/296 (2%)
Query: 49 DNYTFPILLKAAGKNCASRIGFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMF 108
D++TFP ++KA G +G H +K+G+ + V ++L+ MY + ++ ++F
Sbjct: 106 DSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVF 165
Query: 109 ENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMPLKDLSSFNI-LISGYSSCGEVL--- 164
+ MP +D+ +WN+++ + +GE E A+ LF M ++ L S+C +L
Sbjct: 166 DEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLE 225
Query: 165 AARSIFDKMAIK----DIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCL 220
+ I K K D ++++ + +E A +FQ+MP K+ ++WN+M+ G +
Sbjct: 226 RGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYV 285
Query: 221 QRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPH 280
+G V++ + M P T TS+L AC+ +L G IH Y I S + + +
Sbjct: 286 AKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIY 345
Query: 281 VTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYM 336
V +L+D+Y KCG A +F K Q WN +IS G+ + A++++ M
Sbjct: 346 VNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQM 401
Score = 133 bits (335), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 141/277 (50%), Gaps = 16/277 (5%)
Query: 73 HGQTIKTGFYRHIFVQTALINMYGTL--HCTADACKMFENMPVK-DLVAWNSMLDAYASN 129
H + + G R + + +LIN+Y T HC+A +FEN ++ D+ WNS++ Y+ N
Sbjct: 27 HQRILTLGLRRDVVLCKSLINVYFTCKDHCSAR--HVFENFDIRSDVYIWNSLMSGYSKN 84
Query: 130 GEMEDAISLFHMMP-----LKDLSSFNILISGYSSCGEVLAARSIFDKMAIK-----DIV 179
D + +F + + D +F +I Y + G R I + +K D+V
Sbjct: 85 SMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIH-TLVVKSGYVCDVV 143
Query: 180 SWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTN 239
+S++ + E + +F EMP ++ SWNT+++ Q G+ +A++LF M+++
Sbjct: 144 VASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSG 203
Query: 240 CLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQAL 299
P+ ++ T +SAC+ L LE G +IH + G +V +AL+DMY KC +E A
Sbjct: 204 FEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAR 263
Query: 300 QIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYM 336
++F K K + WN++I G G + +++ M
Sbjct: 264 EVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRM 300
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 143/304 (47%), Gaps = 15/304 (4%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
MP + WN +IK ++ G+++ V M + G R T +L A ++ G
Sbjct: 269 MPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHG 328
Query: 70 FAFHGQTIKTGFYRHIFVQTALINMYGTLHC-TADACKMFENMPVKDLV-AWNSMLDAYA 127
HG I++ I+V +LI++Y C A+ + + KD+ +WN M+ +Y
Sbjct: 329 KFIHGYVIRSVVNADIYVNCSLIDLY--FKCGEANLAETVFSKTQKDVAESWNVMISSYI 386
Query: 128 SNGEMEDAISLFHMMP----LKDLSSFNILISGYSSCGEVLAAR----SIFDKMAIKDIV 179
S G A+ ++ M D+ +F ++ S + + SI + D +
Sbjct: 387 SVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDEL 446
Query: 180 SWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTN 239
+++L ++ G+ ++AF +F +P K+ +SW M++ GQ EA+ FDEM+
Sbjct: 447 LLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFG 506
Query: 240 CLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVT--TALMDMYAKCGSIEQ 297
PD +T +VLSAC H G ++ G+K + S P + + ++D+ + G + +
Sbjct: 507 LKPDGVTLLAVLSACGHAGLIDEGLKF-FSQMRSKYGIEPIIEHYSCMIDILGRAGRLLE 565
Query: 298 ALQI 301
A +I
Sbjct: 566 AYEI 569
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 83/164 (50%), Gaps = 2/164 (1%)
Query: 176 KDIVSWNSILSACTRAGDMEKAFALFQEMPMKNTIS-WNTMLAGCLQRGQFSEAVDLFDE 234
+D+V S+++ D A +F+ +++ + WN++++G + F + +++F
Sbjct: 37 RDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKR 96
Query: 235 MKTTN-CLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCG 293
+ + C+PD T +V+ A LG G IH + SG V ++L+ MYAK
Sbjct: 97 LLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFN 156
Query: 294 SIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMK 337
E +LQ+F + +D+ WN +IS G AL+LFG M+
Sbjct: 157 LFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRME 200
>AT1G50270.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:18622044-18623834 FORWARD
Length = 596
Score = 170 bits (430), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 104/341 (30%), Positives = 180/341 (52%), Gaps = 14/341 (4%)
Query: 8 CFMPSLEVRRWNEIIKKHMLVG---NAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNC 64
C + +L ++ W+ +I H G N + L Y +M+ +G +TFP LLKA K
Sbjct: 60 CQLQTLSIQLWDSLIG-HFSGGITLNRRLSFLAYRHMRRNGVIPSRHTFPPLLKAVFKLR 118
Query: 65 ASRIGFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLD 124
S F FH +K G FV+ +LI+ Y + A ++F+ KD+V W +M+D
Sbjct: 119 DSN-PFQFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMID 177
Query: 125 AYASNGEMEDAISLFHMMPLKDLSSFNI-LISGYSSCG---EVLAARSI----FDKMAIK 176
+ NG +A+ F M +++ + ++S + G +V RS+ + +K
Sbjct: 178 GFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVK 237
Query: 177 -DIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEM 235
D+ +S++ + + A +F EMP +N ++W ++AG +Q F + + +F+EM
Sbjct: 238 CDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEM 297
Query: 236 KTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSI 295
++ P+ T +SVLSACAH+G+L G ++H Y I + + + T L+D+Y KCG +
Sbjct: 298 LKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCL 357
Query: 296 EQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYM 336
E+A+ +F + K++Y W A+I+G A HG+ A LF M
Sbjct: 358 EEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTM 398
Score = 125 bits (314), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 164/323 (50%), Gaps = 15/323 (4%)
Query: 14 EVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFH 73
+V W +I + G+A +A++ +V M+ G A+ T +LKAAGK R G + H
Sbjct: 168 DVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVH 227
Query: 74 GQTIKTGFYR-HIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEM 132
G ++TG + +F+ ++L++MYG C DA K+F+ MP +++V W +++ Y +
Sbjct: 228 GLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCF 287
Query: 133 EDAISLFHMMPLKDLS-SFNILISGYSSCGEVLA---ARSIFDKMAIKDIVSWNS----- 183
+ + +F M D++ + L S S+C V A R + M IK+ + N+
Sbjct: 288 DKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYM-IKNSIEINTTAGTT 346
Query: 184 ILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPD 243
++ + G +E+A +F+ + KN +W M+ G G +A DLF M +++ P+
Sbjct: 347 LIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPN 406
Query: 244 YLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVT--TALMDMYAKCGSIEQALQI 301
+T +VLSACAH G +E G ++ + ++ P ++D++ + G +E+A +
Sbjct: 407 EVTFMAVLSACAHGGLVEEGRRLFL-SMKGRFNMEPKADHYACMVDLFGRKGLLEEAKAL 465
Query: 302 FFKAQVKDI-YCWNAIISGLALH 323
+ ++ W A+ LH
Sbjct: 466 IERMPMEPTNVVWGALFGSCLLH 488
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 100/234 (42%), Gaps = 19/234 (8%)
Query: 6 CNCF---------MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPIL 56
C+C+ MPS V W +I ++ ++ +L + M + T +
Sbjct: 253 CSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSV 312
Query: 57 LKAAGKNCASRIGFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDL 116
L A A G H IK + T LI++Y C +A +FE + K++
Sbjct: 313 LSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNV 372
Query: 117 VAWNSMLDAYASNGEMEDAISLFHMMPLKDLS----SFNILISGYSSCGEVLAARSIFDK 172
W +M++ +A++G DA LF+ M +S +F ++S + G V R +F
Sbjct: 373 YTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLS 432
Query: 173 MAIKDIVSWNSILSACT-----RAGDMEKAFALFQEMPMKNT-ISWNTMLAGCL 220
M + + + AC R G +E+A AL + MPM+ T + W + CL
Sbjct: 433 MKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCL 486
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 70/171 (40%), Gaps = 15/171 (8%)
Query: 176 KDIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDL---- 231
+D+ + CT A A L ++ + W++++ G FS + L
Sbjct: 34 RDLFLSRLLRRCCTAATQFRYARRLLCQLQTLSIQLWDSLI------GHFSGGITLNRRL 87
Query: 232 ----FDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMD 287
+ M+ +P T +L A L + H + + GL S P V +L+
Sbjct: 88 SFLAYRHMRRNGVIPSRHTFPPLLKAVFKLRD-SNPFQFHAHIVKFGLDSDPFVRNSLIS 146
Query: 288 MYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMKK 338
Y+ G + A ++F A+ KD+ W A+I G +G A+ F MKK
Sbjct: 147 GYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKK 197
>AT2G20540.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:8844160-8845764 FORWARD
Length = 534
Score = 169 bits (428), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 104/339 (30%), Positives = 163/339 (48%), Gaps = 45/339 (13%)
Query: 41 MQVHGFR-ADNYTFPILLKAAGKNCASRIGFAFHGQTIKTGFYRHIFVQTALINMYGTLH 99
M HG R +NY P L + +N +I + I G + F+ T +++ +
Sbjct: 1 MAFHGIREVENYFIPFLQRVKSRNEWKKI----NASIIIHGLSQSSFMVTKMVDFCDKIE 56
Query: 100 CTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMM-----PLKDLSSF---- 150
A ++F + ++ +NS++ AY N D I ++ + L D +F
Sbjct: 57 DMDYATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMF 116
Query: 151 -------------------------------NILISGYSSCGEVLAARSIFDKMAIKDIV 179
N LI Y +++ A +FD+M +D++
Sbjct: 117 KSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVI 176
Query: 180 SWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTN 239
SWNS+LS R G M+KA LF M K +SW M++G G + EA+D F EM+
Sbjct: 177 SWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAG 236
Query: 240 CLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQAL 299
PD ++ SVL +CA LGSLE G IH+YA G V AL++MY+KCG I QA+
Sbjct: 237 IEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAI 296
Query: 300 QIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMKK 338
Q+F + + KD+ W+ +ISG A HG+ + A++ F M++
Sbjct: 297 QLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQR 335
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 92/324 (28%), Positives = 155/324 (47%), Gaps = 43/324 (13%)
Query: 49 DNYTFPILLKAAGKNCASRIGFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMF 108
D +TFP + K+ + +G HG K G H+ + ALI+MY DA K+F
Sbjct: 108 DRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVF 167
Query: 109 ENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMPLKDLSSFNILISGYSSCGEVLAARS 168
+ M +D+++WNS+L YA G+M+ A LFH+M K + S+ +ISGY+ G + A
Sbjct: 168 DEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMD 227
Query: 169 IFDKMAI----KDIVSWNSILSACTRAGDME----------------------------- 195
F +M + D +S S+L +C + G +E
Sbjct: 228 FFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYS 287
Query: 196 ------KAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATS 249
+A LF +M K+ ISW+TM++G G A++ F+EM+ P+ +T
Sbjct: 288 KCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLG 347
Query: 250 VLSACAHLGSLETGIKIHVYAIYSGLASSPHVT--TALMDMYAKCGSIEQALQIFFKAQV 307
+LSAC+H+G + G++ + + P + L+D+ A+ G +E+A++I +
Sbjct: 348 LLSACSHVGMWQEGLR-YFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPM 406
Query: 308 K-DIYCWNAIISGLALHGHGYAAL 330
K D W +++S G+ AL
Sbjct: 407 KPDSKIWGSLLSSCRTPGNLDVAL 430
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 99/228 (43%), Gaps = 10/228 (4%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTI 77
W +I + +G +A+ + MQ+ G D + +L + + + +G H
Sbjct: 209 WTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAE 268
Query: 78 KTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAIS 137
+ GF + V ALI MY + A ++F M KD+++W++M+ YA +G AI
Sbjct: 269 RRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIE 328
Query: 138 LFHMMPLKDLSSFNI----LISGYSSCGEVLAARSIFDKMAIK-----DIVSWNSILSAC 188
F+ M + I L+S S G FD M I + ++
Sbjct: 329 TFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVL 388
Query: 189 TRAGDMEKAFALFQEMPMK-NTISWNTMLAGCLQRGQFSEAVDLFDEM 235
RAG +E+A + + MPMK ++ W ++L+ C G A+ D +
Sbjct: 389 ARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHL 436
>AT3G61170.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:22638691-22641237 REVERSE
Length = 783
Score = 169 bits (427), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 105/330 (31%), Positives = 168/330 (50%), Gaps = 11/330 (3%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTI 77
W ++ + G A +A+ + +++ G +++ YTFP +L A A R+G H +
Sbjct: 195 WTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIV 254
Query: 78 KTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAIS 137
K+GF +I+VQ+ALI+MY A + E M V D+V+WNSM+ G + +A+S
Sbjct: 255 KSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALS 314
Query: 138 LFHMMPLKDLSSFNILISGYSSC-----GEVLAARS-----IFDKMAIKDIVSWNSILSA 187
+F M +D+ + I +C E+ A S + A +V+ N+++
Sbjct: 315 MFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVN-NALVDM 373
Query: 188 CTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTA 247
+ G M+ A +F+ M K+ ISW ++ G G + EA+ LF M+ PD +
Sbjct: 374 YAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVT 433
Query: 248 TSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQV 307
SVLSA A L LE G ++H I SG SS V +L+ MY KCGS+E A IF ++
Sbjct: 434 ASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEI 493
Query: 308 KDIYCWNAIISGLALHGHGYAALKLFGYMK 337
+D+ W +I G A +G A + F M+
Sbjct: 494 RDLITWTCLIVGYAKNGLLEDAQRYFDSMR 523
Score = 128 bits (322), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 133/274 (48%), Gaps = 40/274 (14%)
Query: 103 DACKMFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMPLKDLSSFNILISGYSSCGE 162
+A +MF+ MP +D WN+M+ AY+++ + DA LF P+K+ S+N LISGY G
Sbjct: 46 EARQMFDKMPERDEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGS 105
Query: 163 VLAARSIFDKMAIKDI----VSWNSILSACT----------------------------- 189
+ A ++F +M I + S+L CT
Sbjct: 106 KVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNG 165
Query: 190 ------RAGDMEKAFALFQEMP-MKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLP 242
+ + +A LF+ M KN ++W +ML G Q G +A++ F +++
Sbjct: 166 LLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQS 225
Query: 243 DYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIF 302
+ T SVL+ACA + + G+++H + SG ++ +V +AL+DMYAKC +E A +
Sbjct: 226 NQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALL 285
Query: 303 FKAQVKDIYCWNAIISGLALHGHGYAALKLFGYM 336
+V D+ WN++I G G AL +FG M
Sbjct: 286 EGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRM 319
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 99/364 (27%), Positives = 150/364 (41%), Gaps = 78/364 (21%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRI----GFAFH 73
WN +I + G+ +A + MQ G + + YT +L+ C S + G H
Sbjct: 93 WNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRM----CTSLVLLLRGEQIH 148
Query: 74 GQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMP-VKDLVAWNSMLDAYASNGEM 132
G TIKTGF + V L+ MY ++A +FE M K+ V W SML Y+ NG
Sbjct: 149 GHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFA 208
Query: 133 EDAISLF----------------------------------HMMPLKDLSSFNI-----L 153
AI F H +K NI L
Sbjct: 209 FKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSAL 268
Query: 154 ISGYSSCGEVLAARSIFDKMAIKDIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWN 213
I Y+ C E+ +AR++ + M + D+VSWNS++ C R G + +A ++F M ++
Sbjct: 269 IDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDM---- 324
Query: 214 TMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYS 273
+D F NC T + S+ H + +
Sbjct: 325 --------------KIDDFTIPSILNCFALSRTEMKIASSA------------HCLIVKT 358
Query: 274 GLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLF 333
G A+ V AL+DMYAK G ++ AL++F KD+ W A+++G +G ALKLF
Sbjct: 359 GYATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLF 418
Query: 334 GYMK 337
M+
Sbjct: 419 CNMR 422
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 105/189 (55%), Gaps = 1/189 (0%)
Query: 151 NILISGYSSCGEVLAARSIFDKMAIKDIVSWNSILSACTRAGDMEKAFALFQEMPMKNTI 210
N+L+ S G V AR +FDKM +D +WN+++ A + + + A LF+ P+KNTI
Sbjct: 32 NLLLGDLSKSGRVDEARQMFDKMPERDEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTI 91
Query: 211 SWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYA 270
SWN +++G + G EA +LF EM++ P+ T SVL C L L G +IH +
Sbjct: 92 SWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHT 151
Query: 271 IYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQ-VKDIYCWNAIISGLALHGHGYAA 329
I +G +V L+ MYA+C I +A +F + K+ W ++++G + +G + A
Sbjct: 152 IKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKA 211
Query: 330 LKLFGYMKK 338
++ F +++
Sbjct: 212 IECFRDLRR 220
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 135/322 (41%), Gaps = 44/322 (13%)
Query: 14 EVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKA-AGKNCASRIGFAF 72
+V WN +I + G +A+ + M + D++T P +L A +I +
Sbjct: 292 DVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSA 351
Query: 73 HGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEM 132
H +KTG+ + V AL++MY A K+FE M KD+++W +++ NG
Sbjct: 352 HCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSY 411
Query: 133 EDAISLFHMMPLKDLSSFNILISGYSSCGEVLAARSIFDKMAIKDIVSW--------NSI 184
++A+ LF M + ++ I+ + S L ++ I S NS+
Sbjct: 412 DEALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSL 471
Query: 185 LSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDY 244
++ T+ G +E A +F M +++ I+W ++ G + G +A FD M+T
Sbjct: 472 VTMYTKCGSLEDANVIFNSMEIRDLITWTCLIVGYAKNGLLEDAQRYFDSMRT------- 524
Query: 245 LTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFK 304
VY I G P ++D++ + G + Q+ +
Sbjct: 525 -----------------------VYGITPG----PEHYACMIDLFGRSGDFVKVEQLLHQ 557
Query: 305 AQVK-DIYCWNAIISGLALHGH 325
+V+ D W AI++ HG+
Sbjct: 558 MEVEPDATVWKAILAASRKHGN 579
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 106/239 (44%), Gaps = 9/239 (3%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
M +V W ++ + G+ ++A+ + NM+V G D +L A+ + G
Sbjct: 390 MIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFG 449
Query: 70 FAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASN 129
HG IK+GF + V +L+ MY DA +F +M ++DL+ W ++ YA N
Sbjct: 450 QQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCLIVGYAKN 509
Query: 130 GEMEDAISLFHMMP-----LKDLSSFNILISGYSSCGEVLAARSIFDKMAIK-DIVSWNS 183
G +EDA F M + +I + G+ + + +M ++ D W +
Sbjct: 510 GLLEDAQRYFDSMRTVYGITPGPEHYACMIDLFGRSGDFVKVEQLLHQMEVEPDATVWKA 569
Query: 184 ILSACTRAGDM---EKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTN 239
IL+A + G++ E+A E+ N + + + G+ EA ++ MK+ N
Sbjct: 570 ILAASRKHGNIENGERAAKTLMELEPNNAVPYVQLSNMYSAAGRQDEAANVRRLMKSRN 628
>AT4G18750.1 | Symbols: DOT4 | DOT4 (DEFECTIVELY ORGANIZED
TRIBUTARIES 4) | chr4:10304850-10307465 FORWARD
Length = 871
Score = 168 bits (425), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 99/327 (30%), Positives = 172/327 (52%), Gaps = 8/327 (2%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTI 77
WN ++ + G+ ++ + M G D+YTF + K+ + G HG +
Sbjct: 163 WNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFIL 222
Query: 78 KTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAIS 137
K+GF V +L+ Y A K+F+ M +D+++WNS+++ Y SNG E +S
Sbjct: 223 KSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLS 282
Query: 138 LFHMMPLKDLS-SFNILISGYSSCGE--VLAARSIFDKMAIKDIVSW-----NSILSACT 189
+F M + + ++S ++ C + +++ + +K S N++L +
Sbjct: 283 VFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYS 342
Query: 190 RAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATS 249
+ GD++ A A+F+EM ++ +S+ +M+AG + G EAV LF+EM+ PD T T+
Sbjct: 343 KCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTA 402
Query: 250 VLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKD 309
VL+ CA L+ G ++H + + L V+ ALMDMYAKCGS+++A +F + +VKD
Sbjct: 403 VLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKD 462
Query: 310 IYCWNAIISGLALHGHGYAALKLFGYM 336
I WN II G + + + AL LF +
Sbjct: 463 IISWNTIIGGYSKNCYANEALSLFNLL 489
Score = 150 bits (380), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 102/341 (29%), Positives = 163/341 (47%), Gaps = 15/341 (4%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
M +V WN II ++ G AE+ + +V M V G D T + + +G
Sbjct: 256 MTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLG 315
Query: 70 FAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASN 129
A H +K F R L++MY A +F M + +V++ SM+ YA
Sbjct: 316 RAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYARE 375
Query: 130 GEMEDAISLFHMMPLKDLSSFNILISGYSSCGEVLAARSIFDKMA-----IK------DI 178
G +A+ LF M + +S ++ +C A + D+ IK DI
Sbjct: 376 GLAGEAVKLFEEMEEEGISPDVYTVTAVLNC---CARYRLLDEGKRVHEWIKENDLGFDI 432
Query: 179 VSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEM-KT 237
N+++ + G M++A +F EM +K+ ISWNT++ G + +EA+ LF+ + +
Sbjct: 433 FVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEE 492
Query: 238 TNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQ 297
PD T VL ACA L + + G +IH Y + +G S HV +L+DMYAKCG++
Sbjct: 493 KRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLL 552
Query: 298 ALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMKK 338
A +F KD+ W +I+G +HG G A+ LF M++
Sbjct: 553 AHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQ 593
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 147/334 (44%), Gaps = 29/334 (8%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
M V + +I + G A +AV + M+ G D YT +L NC +R
Sbjct: 357 MSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVL-----NCCARYR 411
Query: 70 FAFHGQTIKT-------GFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSM 122
G+ + GF IFV AL++MY +A +F M VKD+++WN++
Sbjct: 412 LLDEGKRVHEWIKENDLGF--DIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTI 469
Query: 123 LDAYASNGEMEDAISLFHMMPLKDLSSFNILISGYSSCGEVLAARSIFDKMA-------- 174
+ Y+ N +A+SLF++ L + F+ + A+ S FDK
Sbjct: 470 IGGYSKNCYANEALSLFNL--LLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMR 527
Query: 175 ---IKDIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDL 231
D NS++ + G + A LF ++ K+ +SW M+AG G EA+ L
Sbjct: 528 NGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIAL 587
Query: 232 FDEMKTTNCLPDYLTATSVLSACAHLGSLETGIK-IHVYAIYSGLASSPHVTTALMDMYA 290
F++M+ D ++ S+L AC+H G ++ G + ++ + + ++DM A
Sbjct: 588 FNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLA 647
Query: 291 KCGSIEQALQIFFKAQV-KDIYCWNAIISGLALH 323
+ G + +A + + D W A++ G +H
Sbjct: 648 RTGDLIKAYRFIENMPIPPDATIWGALLCGCRIH 681
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 120/254 (47%), Gaps = 10/254 (3%)
Query: 94 MYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMPLK----DLSS 149
MY +A ++F+ + ++ + WN +++ A +G+ +I LF M D +
Sbjct: 138 MYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYT 197
Query: 150 FNILISGYSSC-----GEVLAARSIFDKMAIKDIVSWNSILSACTRAGDMEKAFALFQEM 204
F+ + +SS GE L + ++ V NS+++ + ++ A +F EM
Sbjct: 198 FSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVG-NSLVAFYLKNQRVDSARKVFDEM 256
Query: 205 PMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGI 264
++ ISWN+++ G + G + + +F +M + D T SV + CA + G
Sbjct: 257 TERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGR 316
Query: 265 KIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHG 324
+H + + + L+DMY+KCG ++ A +F + + + + ++I+G A G
Sbjct: 317 AVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREG 376
Query: 325 HGYAALKLFGYMKK 338
A+KLF M++
Sbjct: 377 LAGEAVKLFEEMEE 390
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 58/129 (44%), Gaps = 12/129 (9%)
Query: 213 NTMLAGCLQRGQFSEAVDLFDEMKTTNCLP-----DYLTATSVLSACAHLGSLETGIKIH 267
NT L + G AV L C+ D T SVL CA SL+ G ++
Sbjct: 65 NTQLRRFCESGNLENAVKLL-------CVSGKWDIDPRTLCSVLQLCADSKSLKDGKEVD 117
Query: 268 VYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGY 327
+ +G ++ + L MY CG +++A ++F + +++ WN +++ LA G
Sbjct: 118 NFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFS 177
Query: 328 AALKLFGYM 336
++ LF M
Sbjct: 178 GSIGLFKKM 186
>AT4G30700.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:14962617-14964995 REVERSE
Length = 792
Score = 167 bits (424), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 113/336 (33%), Positives = 168/336 (50%), Gaps = 12/336 (3%)
Query: 10 MPSLEVRRWNEII---KKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCAS 66
MP + WN +I +K+ + + Q +N R D T +L A +
Sbjct: 180 MPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESC--TRLDTTTLLDILPAVAELQEL 237
Query: 67 RIGFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAY 126
R+G H KTG Y H +V T I++Y +F D+VA+N+M+ Y
Sbjct: 238 RLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGY 297
Query: 127 ASNGEMEDAISLFH--MMPLKDLSSFNILISGYSSCGEVLAARSIFDKMAIKDIVSWNSI 184
SNGE E ++SLF M+ L S + L+S G ++ +I + +S S+
Sbjct: 298 TSNGETELSLSLFKELMLSGARLRS-STLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASV 356
Query: 185 LSACT----RAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNC 240
+A T + ++E A LF E P K+ SWN M++G Q G +A+ LF EM+ +
Sbjct: 357 STALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEF 416
Query: 241 LPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQ 300
P+ +T T +LSACA LG+L G +H + SS +V+TAL+ MYAKCGSI +A +
Sbjct: 417 SPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARR 476
Query: 301 IFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYM 336
+F K+ WN +ISG LHG G AL +F M
Sbjct: 477 LFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEM 512
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 86/316 (27%), Positives = 149/316 (47%), Gaps = 13/316 (4%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTI 77
+N +I + G E ++ + + + G R + T L+ +G + +A HG +
Sbjct: 290 YNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLM---LIYAIHGYCL 346
Query: 78 KTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAIS 137
K+ F H V TAL +Y L+ A K+F+ P K L +WN+M+ Y NG EDAIS
Sbjct: 347 KSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAIS 406
Query: 138 LFHMMPLKDLS----SFNILISGYSSCGEVLAARSIFDKMAIKDIVSW----NSILSACT 189
LF M + S + ++S + G + + + D + D S +++
Sbjct: 407 LFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYA 466
Query: 190 RAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATS 249
+ G + +A LF M KN ++WNTM++G GQ EA+++F EM + P +T
Sbjct: 467 KCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLC 526
Query: 250 VLSACAHLGSLETGIKIHVYAIYS-GLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVK 308
VL AC+H G ++ G +I I+ G S ++D+ + G +++ALQ ++
Sbjct: 527 VLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIE 586
Query: 309 D-IYCWNAIISGLALH 323
W ++ +H
Sbjct: 587 PGSSVWETLLGACRIH 602
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 100/219 (45%), Gaps = 10/219 (4%)
Query: 11 PSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGF 70
P + WN +I + G E A+ + MQ F + T +L A + A +G
Sbjct: 381 PEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGK 440
Query: 71 AFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNG 130
H T F I+V TALI MY A+A ++F+ M K+ V WN+M+ Y +G
Sbjct: 441 WVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHG 500
Query: 131 EMEDAISLFHMMPLKDLS----SFNILISGYSSCGEVLAARSIFDKMAIK-----DIVSW 181
+ ++A+++F+ M ++ +F ++ S G V IF+ M + + +
Sbjct: 501 QGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHY 560
Query: 182 NSILSACTRAGDMEKAFALFQEMPMKNTIS-WNTMLAGC 219
++ RAG +++A + M ++ S W T+L C
Sbjct: 561 ACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGAC 599
>AT4G02750.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:1221116-1223461 REVERSE
Length = 781
Score = 167 bits (423), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 91/267 (34%), Positives = 146/267 (54%), Gaps = 31/267 (11%)
Query: 103 DACKMFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMPLKDLSSFNILISGYSSCGE 162
+A + F++M V+D+V+WN+++ YA +G++++A LF P++D+ ++ ++SGY
Sbjct: 237 EARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRM 296
Query: 163 VLAARSIFDKMAIKDIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQR 222
V AR +FDKM ++ VSWN++L+ + ME A LF MP +N +WNTM+ G Q
Sbjct: 297 VEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQC 356
Query: 223 GQFSEAVDLFDEMKTTNCLP-------------------------------DYLTATSVL 251
G+ SEA +LFD+M + + + + +S L
Sbjct: 357 GKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSAL 416
Query: 252 SACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIY 311
S CA + +LE G ++H + G + V AL+ MY KCGSIE+A +F + KDI
Sbjct: 417 STCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIV 476
Query: 312 CWNAIISGLALHGHGYAALKLFGYMKK 338
WN +I+G + HG G AL+ F MK+
Sbjct: 477 SWNTMIAGYSRHGFGEVALRFFESMKR 503
Score = 148 bits (373), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 80/258 (31%), Positives = 138/258 (53%), Gaps = 12/258 (4%)
Query: 83 RHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMM 142
R + +++ Y C DA +F+ MP K+ V+WN++L AY N +ME+A LF
Sbjct: 155 RDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSR 214
Query: 143 PLKDLSSFNILISGYSSCGEVLAARSIFDKMAIKDIVSWNSILSACTRAGDMEKAFALFQ 202
L S+N L+ G+ +++ AR FD M ++D+VSWN+I++ ++G +++A LF
Sbjct: 215 ENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFD 274
Query: 203 EMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLET 262
E P+++ +W M++G +Q EA +LFD+M N +S A L
Sbjct: 275 ESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERN----------EVSWNAMLAGYVQ 324
Query: 263 GIKIHVYAIYSGLASSPHVTT--ALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGL 320
G ++ + + +V+T ++ YA+CG I +A +F K +D W A+I+G
Sbjct: 325 GERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGY 384
Query: 321 ALHGHGYAALKLFGYMKK 338
+ GH + AL+LF M++
Sbjct: 385 SQSGHSFEALRLFVQMER 402
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 124/240 (51%), Gaps = 20/240 (8%)
Query: 103 DACKMFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMPLKDLSSFNILISGYSSCGE 162
+A ++F+ MP V++N M+ Y NGE E A LF MP +DL S+N++I GY
Sbjct: 82 EALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRN 141
Query: 163 VLAARSIFDKMAIKDIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQR 222
+ AR +F+ M +D+ SWN++LS + G ++ A ++F MP KN +SWN +L+ +Q
Sbjct: 142 LGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQN 201
Query: 223 GQFSEAVDLFDEMK-----TTNC-LPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLA 276
+ EA LF + + NC L ++ ++ A S+ + I +G
Sbjct: 202 SKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITG-- 259
Query: 277 SSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYM 336
YA+ G I++A Q+F ++ V+D++ W A++SG + A +LF M
Sbjct: 260 ------------YAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKM 307
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 125/265 (47%), Gaps = 45/265 (16%)
Query: 104 ACKMFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMPLKDLSSFNILISGYSSCGEV 163
A ++F+ MP +++ WN+M+ YA G++ +A +LF MP +D S+ +I+GYS G
Sbjct: 331 AKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHS 390
Query: 164 LAARSIFDKMAIK----DIVSWNSILSACT------------------------------ 189
A +F +M + + S++S LS C
Sbjct: 391 FEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNAL 450
Query: 190 -----RAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDY 244
+ G +E+A LF+EM K+ +SWNTM+AG + G A+ F+ MK PD
Sbjct: 451 LLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDD 510
Query: 245 LTATSVLSACAHLGSLETGIKIHVYAI---YSGLASSPHVTTALMDMYAKCGSIEQALQI 301
T +VLSAC+H G ++ G + + Y + Y + +S H ++D+ + G +E A +
Sbjct: 511 ATMVAVLSACSHTGLVDKG-RQYFYTMTQDYGVMPNSQHY-ACMVDLLGRAGLLEDAHNL 568
Query: 302 FFKAQVK-DIYCWNAIISGLALHGH 325
+ D W ++ +HG+
Sbjct: 569 MKNMPFEPDAAIWGTLLGASRVHGN 593
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 100/224 (44%), Gaps = 10/224 (4%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
MP + W +I + G++ +A+ +V M+ G R + +F L A +G
Sbjct: 369 MPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELG 428
Query: 70 FAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASN 129
HG+ +K G+ FV AL+ MY +A +F+ M KD+V+WN+M+ Y+ +
Sbjct: 429 KQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRH 488
Query: 130 GEMEDAISLFHMMPLK----DLSSFNILISGYSSCGEVLAARSIFDKMAIKDIVSWNSIL 185
G E A+ F M + D ++ ++S S G V R F M V NS
Sbjct: 489 GFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQH 548
Query: 186 SACT-----RAGDMEKAFALFQEMPMK-NTISWNTMLAGCLQRG 223
AC RAG +E A L + MP + + W T+L G
Sbjct: 549 YACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHG 592
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 73/157 (46%), Gaps = 8/157 (5%)
Query: 177 DIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMK 236
DI WN +S+ R G +A +F+ MP +++S+N M++G L+ G+F A LFDEM
Sbjct: 63 DIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEM- 121
Query: 237 TTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIE 296
P+ + + ++ + G ++ I T ++ YA+ G ++
Sbjct: 122 -----PERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNT--MLSGYAQNGCVD 174
Query: 297 QALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLF 333
A +F + K+ WNA++S + A LF
Sbjct: 175 DARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLF 211
>AT2G42920.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:17858705-17860384 FORWARD
Length = 559
Score = 167 bits (423), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 101/293 (34%), Positives = 163/293 (55%), Gaps = 19/293 (6%)
Query: 50 NYTFPILLKAAGKNCASRIGFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFE 109
NY + + + KN F TI GF R F + A I+++ + C++ + K
Sbjct: 75 NYAYLVFTRINHKN-------PFVWNTIIRGFSRSSFPEMA-ISIFIDMLCSSPSVK--- 123
Query: 110 NMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMPLKDLS--SF--NILISGYSSCGEVLA 165
P + + + S+ AY G+ D L M+ + L SF N ++ Y +CG ++
Sbjct: 124 --PQR--LTYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIE 179
Query: 166 ARSIFDKMAIKDIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQF 225
A IF M D+V+WNS++ + G +++A LF EMP +N +SWN+M++G ++ G+F
Sbjct: 180 AWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRF 239
Query: 226 SEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTAL 285
+A+D+F EM+ + PD T S+L+ACA+LG+ E G IH Y + + + V TAL
Sbjct: 240 KDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTAL 299
Query: 286 MDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMKK 338
+DMY KCG IE+ L +F A K + CWN++I GLA +G A+ LF +++
Sbjct: 300 IDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELER 352
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 95/365 (26%), Positives = 162/365 (44%), Gaps = 45/365 (12%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNM--QVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQ 75
WN II+ E A+ +++M + T+P + KA G+ +R G HG
Sbjct: 92 WNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGM 151
Query: 76 TIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDA 135
IK G F++ +++MY T C +A ++F M D+VAWNSM+ +A G ++ A
Sbjct: 152 VIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQA 211
Query: 136 ISLFHMMPLKDLSSFNILISGYSSCGEVLAARSIFDKMAIKDI----VSWNSILSACT-- 189
+LF MP ++ S+N +ISG+ G A +F +M KD+ + S+L+AC
Sbjct: 212 QNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYL 271
Query: 190 ---------------------------------RAGDMEKAFALFQEMPMKNTISWNTML 216
+ G +E+ +F+ P K WN+M+
Sbjct: 272 GASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMI 331
Query: 217 AGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIH--VYAIYSG 274
G G A+DLF E++ + PD ++ VL+ACAH G + + + Y
Sbjct: 332 LGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMI 391
Query: 275 LASSPHVTTALMDMYAKCGSIEQALQIFFKAQV-KDIYCWNAIISGLALHGHGYAALKLF 333
S H T ++++ G +E+A + V +D W++++S G+ A +
Sbjct: 392 EPSIKHYTL-MVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMAKRAA 450
Query: 334 GYMKK 338
+KK
Sbjct: 451 KCLKK 455
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 119/271 (43%), Gaps = 21/271 (7%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
MP WN +I + G + A+ + MQ + D +T LL A AS G
Sbjct: 218 MPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQG 277
Query: 70 FAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASN 129
H ++ F + V TALI+MY C + +FE P K L WNSM+ A+N
Sbjct: 278 RWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANN 337
Query: 130 GEMEDAISLFHMMPLKDLS----SFNILISGYSSCGEVLAARSIFDKMAIK-----DIVS 180
G E A+ LF + L SF +++ + GEV A F M K I
Sbjct: 338 GFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKH 397
Query: 181 WNSILSACTRAGDMEKAFALFQEMPM-KNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTN 239
+ +++ AG +E+A AL + MP+ ++T+ W+++L+ C + G A +
Sbjct: 398 YTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMA------KRAAK 451
Query: 240 CL----PDYLTATSVLS-ACAHLGSLETGIK 265
CL PD +LS A A G E ++
Sbjct: 452 CLKKLDPDETCGYVLLSNAYASYGLFEEAVE 482
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 78/168 (46%), Gaps = 5/168 (2%)
Query: 175 IKDIVSWNSILS-ACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSE-AVDLF 232
I D V+ + +L+ C DM A+ +F + KN WNT++ G R F E A+ +F
Sbjct: 54 ISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFVWNTIIRG-FSRSSFPEMAISIF 112
Query: 233 DEM--KTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYA 290
+M + + P LT SV A LG G ++H I GL + ++ MY
Sbjct: 113 IDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYV 172
Query: 291 KCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMKK 338
CG + +A +IF D+ WN++I G A G A LF M +
Sbjct: 173 TCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQ 220
>AT4G33170.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:15995701-15998673 REVERSE
Length = 990
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 111/341 (32%), Positives = 172/341 (50%), Gaps = 18/341 (5%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAA-----GKNC 64
M ++ WN +I G +AV ++ + G + D YT +LKAA G +
Sbjct: 376 MSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSL 435
Query: 65 ASRIGFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLD 124
+ ++ H IK FV TALI+ Y C +A +FE DLVAWN+M+
Sbjct: 436 SKQV----HVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERHNF-DLVAWNAMMA 490
Query: 125 AYASNGEMEDAISLFHMMPLKDLSSFNI-LISGYSSCGEVLAARS--IFDKMAIK---DI 178
Y + + + LF +M + S + L + + +CG + A AIK D+
Sbjct: 491 GYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDL 550
Query: 179 VSWNS--ILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMK 236
W S IL + GDM A F +P+ + ++W TM++GC++ G+ A +F +M+
Sbjct: 551 DLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMR 610
Query: 237 TTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIE 296
LPD T ++ A + L +LE G +IH A+ + P V T+L+DMYAKCGSI+
Sbjct: 611 LMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSID 670
Query: 297 QALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMK 337
A +F + ++ +I WNA++ GLA HG G L+LF MK
Sbjct: 671 DAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMK 711
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 136/291 (46%), Gaps = 11/291 (3%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTI 77
WN ++ + + + + + M G R+D++T + K G A G H I
Sbjct: 485 WNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAI 544
Query: 78 KTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAIS 137
K+G+ ++V + +++MY + A F+++PV D VAW +M+ NGE E A
Sbjct: 545 KSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFH 604
Query: 138 LFHMMPLKDL--SSFNI-LISGYSSCGEVLAARSIFDKMAIK-----DIVSWNSILSACT 189
+F M L + F I ++ SSC L A+K D S++
Sbjct: 605 VFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYA 664
Query: 190 RAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATS 249
+ G ++ A+ LF+ + M N +WN ML G Q G+ E + LF +MK+ PD +T
Sbjct: 665 KCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIG 724
Query: 250 VLSACAHLGSLETGIKIHVYAIYSGLASSPHVT--TALMDMYAKCGSIEQA 298
VLSAC+H G + K H+ +++ P + + L D + G ++QA
Sbjct: 725 VLSACSHSGLVSEAYK-HMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQA 774
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/329 (27%), Positives = 148/329 (44%), Gaps = 12/329 (3%)
Query: 19 NEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTIK 78
N+ + +++ G + + +M D TF ++L A K + +G H +K
Sbjct: 284 NKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALK 343
Query: 79 TGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAISL 138
G + V +LINMY L A +F+NM +DL++WNS++ A NG +A+ L
Sbjct: 344 LGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCL 403
Query: 139 FHMMPLK-----DLSSFNILISGYSSCGEVLAARSIFDKMAIK-----DIVSWNSILSAC 188
F M L+ D + ++ SS E L+ AIK D +++ A
Sbjct: 404 F-MQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAY 462
Query: 189 TRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTAT 248
+R M++A LF+ + ++WN M+AG Q + + LF M D T
Sbjct: 463 SRNRCMKEAEILFERHNF-DLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLA 521
Query: 249 SVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVK 308
+V C L ++ G ++H YAI SG V++ ++DMY KCG + A F V
Sbjct: 522 TVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVP 581
Query: 309 DIYCWNAIISGLALHGHGYAALKLFGYMK 337
D W +ISG +G A +F M+
Sbjct: 582 DDVAWTTMISGCIENGEEERAFHVFSQMR 610
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/336 (26%), Positives = 141/336 (41%), Gaps = 43/336 (12%)
Query: 10 MPSLEVRRWNEIIKKHM-----LVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNC 64
MP ++ WN I+ + +V N +QA L + ++ T +LK +
Sbjct: 100 MPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSG 159
Query: 65 ASRIGFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLD 124
+FHG K G FV AL+N+Y + +FE MP +D+V WN ML
Sbjct: 160 YVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLK 219
Query: 125 AYASNGEMEDAISL---FH---MMPLKDLSSFNILISG-YSSCGEVLAARSIFDKMAIKD 177
AY G E+AI L FH + P + ISG S G+V + + D ++ +
Sbjct: 220 AYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVSE 279
Query: 178 IVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKT 237
I+ N LS L GQ+S + F +M
Sbjct: 280 IIFRNKGLSE-------------------------------YLHSGQYSALLKCFADMVE 308
Query: 238 TNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQ 297
++ D +T +L+ + SL G ++H A+ GL V+ +L++MY K
Sbjct: 309 SDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGF 368
Query: 298 ALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLF 333
A +F +D+ WN++I+G+A +G A+ LF
Sbjct: 369 ARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLF 404
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 93/344 (27%), Positives = 147/344 (42%), Gaps = 54/344 (15%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
MP +V WN ++K ++ +G E+A+ G + T +L + +G + +
Sbjct: 206 MPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSDAGQV 265
Query: 70 FAFHGQTIKTGFYRHIFVQTALINMYGT------LHCTADACKMFENMPVKDLVAWNSML 123
+F + IF L + L C AD M E+ D V + ML
Sbjct: 266 KSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFAD---MVESDVECDQVTFILML 322
Query: 124 DAYASNGEMEDAISL---FHMMPLK-----DLSSFNILISGYSSCGEVLAARSIFDKMAI 175
+ D+++L H M LK L+ N LI+ Y + AR++FD M+
Sbjct: 323 ----ATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSE 378
Query: 176 KDIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEM 235
+D+ ISWN+++AG Q G EAV LF ++
Sbjct: 379 RDL-------------------------------ISWNSVIAGIAQNGLEVEAVCLFMQL 407
Query: 236 KTTNCLPDYLTATSVLSACAHLGS-LETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGS 294
PD T TSVL A + L L ++HV+AI S V+TAL+D Y++
Sbjct: 408 LRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRC 467
Query: 295 IEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMKK 338
+++A +I F+ D+ WNA+++G G+ LKLF M K
Sbjct: 468 MKEA-EILFERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHK 510
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 86/175 (49%), Gaps = 15/175 (8%)
Query: 86 FVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGE-----MEDAISLFH 140
F+ LI+MY A ++F+ MP +DLV+WNS+L AYA + E ++ A LF
Sbjct: 75 FLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFR 134
Query: 141 MMPLKDLSSFNILISGYSS----CGEVLAARSIFDKMAIK-----DIVSWNSILSACTRA 191
++ + + + +S G V A+ S F A K D ++++ +
Sbjct: 135 ILRQDVVYTSRMTLSPMLKLCLHSGYVWASES-FHGYACKIGLDGDEFVAGALVNIYLKF 193
Query: 192 GDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLT 246
G +++ LF+EMP ++ + WN ML L+ G EA+DL ++ P+ +T
Sbjct: 194 GKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEIT 248
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 73/156 (46%), Gaps = 5/156 (3%)
Query: 182 NSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQ-----FSEAVDLFDEMK 236
N+++S ++ G + A +F +MP ++ +SWN++LA Q + +A LF ++
Sbjct: 78 NNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILR 137
Query: 237 TTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIE 296
+T + +L C H G + H YA GL V AL+++Y K G ++
Sbjct: 138 QDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVK 197
Query: 297 QALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKL 332
+ +F + +D+ WN ++ G A+ L
Sbjct: 198 EGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDL 233
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE
Length = 654
Score = 166 bits (419), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 99/340 (29%), Positives = 171/340 (50%), Gaps = 11/340 (3%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQ-VHGFRADNYTFPILLKAAGKNCASRI 68
MP ++ WN +I L + +++M+ + G + T + A G+ A R
Sbjct: 164 MPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALRE 223
Query: 69 GFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYAS 128
G A HG + GF + V+T ++++Y C A ++F+ K+ V W++M+ Y
Sbjct: 224 GKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVE 283
Query: 129 NGEMEDAISLFHMMPLKD------LSSFNILISGYSSCGEVLAARSI----FDKMAIKDI 178
N +++A +F M + D + +++ G + G++ R + I D+
Sbjct: 284 NEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDL 343
Query: 179 VSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTT 238
N+I+S + G + AF F E+ +K+ IS+N+++ GC+ + E+ LF EM+T+
Sbjct: 344 TVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTS 403
Query: 239 NCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQA 298
PD T VL+AC+HL +L G H Y + G A + + ALMDMY KCG ++ A
Sbjct: 404 GIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVA 463
Query: 299 LQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMKK 338
++F +DI WN ++ G +HG G AL LF M++
Sbjct: 464 KRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQE 503
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/338 (26%), Positives = 156/338 (46%), Gaps = 11/338 (3%)
Query: 11 PSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGF 70
P + W+ +I+ + AE+A+ Y M G R YT+P +LKA A G
Sbjct: 64 PRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGK 123
Query: 71 AFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNG 130
H + F ++V TAL++ Y A K+F+ MP +D+VAWN+M+ ++ +
Sbjct: 124 LIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHC 183
Query: 131 EMEDAISLFHMMPLKDLSSFNI--LISGYSSCGEVLAARS------IFDKMAI-KDIVSW 181
+ D I LF M D S N+ ++ + + G A R +M D+V
Sbjct: 184 CLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVK 243
Query: 182 NSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTN-- 239
IL ++ + A +F KN ++W+ M+ G ++ EA ++F +M +
Sbjct: 244 TGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNV 303
Query: 240 CLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQAL 299
+ + +L CA G L G +H YA+ +G V ++ YAK GS+ A
Sbjct: 304 AMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAF 363
Query: 300 QIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMK 337
+ F + +KD+ +N++I+G ++ + +LF M+
Sbjct: 364 RQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMR 401
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 112/241 (46%), Gaps = 12/241 (4%)
Query: 69 GFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYAS 128
G H +K GF + VQ +I+ Y DA + F + +KD++++NS++
Sbjct: 327 GRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVV 386
Query: 129 NGEMEDAISLFHMMPLKDLS-SFNILISGYSSCGEVLA--------ARSIFDKMAIKDIV 179
N E++ LFH M + L+ ++C + A + A+ +
Sbjct: 387 NCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSI 446
Query: 180 SWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTN 239
N+++ T+ G ++ A +F M ++ +SWNTML G G EA+ LF+ M+ T
Sbjct: 447 C-NALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETG 505
Query: 240 CLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVT--TALMDMYAKCGSIEQ 297
PD +T ++LSAC+H G ++ G ++ P + + D+ A+ G +++
Sbjct: 506 VNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDE 565
Query: 298 A 298
A
Sbjct: 566 A 566
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 94/195 (48%), Gaps = 32/195 (16%)
Query: 147 LSSFNILISG---YSSCGEVLAARSIFDKMAIKDIVSWNSILSACTRAGDMEKAFALFQE 203
LSS +L++ Y+SC EV AR +FD++
Sbjct: 32 LSSSTVLVNLTRLYASCNEVELARHVFDEIP----------------------------- 62
Query: 204 MPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETG 263
P N I+W+ M+ +A+DL+ +M + P T VL ACA L +++ G
Sbjct: 63 HPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDG 122
Query: 264 IKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALH 323
IH + S A+ +V TAL+D YAKCG +E A+++F + +D+ WNA+ISG +LH
Sbjct: 123 KLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLH 182
Query: 324 GHGYAALKLFGYMKK 338
+ LF M++
Sbjct: 183 CCLTDVIGLFLDMRR 197
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 103/217 (47%), Gaps = 11/217 (5%)
Query: 14 EVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFH 73
+V +N +I ++ E++ + M+ G R D T +L A A G + H
Sbjct: 373 DVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCH 432
Query: 74 GQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEME 133
G + G+ + + AL++MY A ++F+ M +D+V+WN+ML + +G +
Sbjct: 433 GYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGK 492
Query: 134 DAISLFHMMPLKDLSSFNI----LISGYSSCGEVLAARSIFDKMAIKD------IVSWNS 183
+A+SLF+ M ++ + ++S S G V + +F+ M+ D I +N
Sbjct: 493 EALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNC 552
Query: 184 ILSACTRAGDMEKAFALFQEMPMKNTIS-WNTMLAGC 219
+ RAG +++A+ +MP + I T+L+ C
Sbjct: 553 MTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSAC 589
>AT4G35130.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:16721084-16723498 REVERSE
Length = 804
Score = 165 bits (418), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 105/327 (32%), Positives = 169/327 (51%), Gaps = 16/327 (4%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTI 77
WN +IK G +AV Y M G +AD +T+P ++K+ + G H I
Sbjct: 98 WNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVI 157
Query: 78 KTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAIS 137
K GF ++V +LI++Y L C DA K+FE MP +D+V+WNSM+ Y + G+ ++
Sbjct: 158 KLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLM 217
Query: 138 LFHMM--------PLKDLSSFNILISGYS-SCGEVLAARSIFDKMAIKDIVSWNSILSAC 188
LF M +S+ YS G+ + ++ ++ D++ SIL
Sbjct: 218 LFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMY 277
Query: 189 TRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQR-GQFSEAVDLFDEMKTTNCL-PDYLT 246
++ G++ A +F M +N ++WN M+ GC R G+ ++A F +M N L PD +T
Sbjct: 278 SKYGEVSYAERIFNGMIQRNIVAWNVMI-GCYARNGRVTDAFLCFQKMSEQNGLQPDVIT 336
Query: 247 ATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQ 306
+ ++L A A L G IH YA+ G + TAL+DMY +CG ++ A IF +
Sbjct: 337 SINLLPASAIL----EGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMA 392
Query: 307 VKDIYCWNAIISGLALHGHGYAALKLF 333
K++ WN+II+ +G Y+AL+LF
Sbjct: 393 EKNVISWNSIIAAYVQNGKNYSALELF 419
Score = 154 bits (389), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 95/338 (28%), Positives = 170/338 (50%), Gaps = 16/338 (4%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
MP ++ WN +I ++ +G+ +++ + M GF+ D ++ L A + ++G
Sbjct: 191 MPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMG 250
Query: 70 FAFHGQTIKTGFYR-HIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYAS 128
H +++ + V T++++MY + A ++F M +++VAWN M+ YA
Sbjct: 251 KEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYAR 310
Query: 129 NGEMEDAISLFHMMPLKD------LSSFNILISGYSSCGEVLAARSI----FDKMAIKDI 178
NG + DA F M ++ ++S N+L +L R+I + + +
Sbjct: 311 NGRVTDAFLCFQKMSEQNGLQPDVITSINLL-----PASAILEGRTIHGYAMRRGFLPHM 365
Query: 179 VSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTT 238
V +++ G ++ A +F M KN ISWN+++A +Q G+ A++LF E+ +
Sbjct: 366 VLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDS 425
Query: 239 NCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQA 298
+ +PD T S+L A A SL G +IH Y + S S+ + +L+ MYA CG +E A
Sbjct: 426 SLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDA 485
Query: 299 LQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYM 336
+ F +KD+ WN+II A+HG G ++ LF M
Sbjct: 486 RKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEM 523
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 117/256 (45%), Gaps = 40/256 (15%)
Query: 123 LDAYASNGEMEDAISLFHMMPLKDLSSFNILISGYSSCGEVLAARSIFDKMA-------- 174
L +A + MEDA+ LF M D +N++I G++SCG + A + +M
Sbjct: 71 LRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADT 130
Query: 175 -------------------------------IKDIVSWNSILSACTRAGDMEKAFALFQE 203
+ D+ NS++S + G A +F+E
Sbjct: 131 FTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEE 190
Query: 204 MPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETG 263
MP ++ +SWN+M++G L G ++ LF EM PD + S L AC+H+ S + G
Sbjct: 191 MPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMG 250
Query: 264 IKIHVYAIYSGLASSP-HVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLAL 322
+IH +A+ S + + V T+++DMY+K G + A +IF ++I WN +I A
Sbjct: 251 KEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYAR 310
Query: 323 HGHGYAALKLFGYMKK 338
+G A F M +
Sbjct: 311 NGRVTDAFLCFQKMSE 326
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 122/255 (47%), Gaps = 13/255 (5%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNM-QVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQT 76
WN +I + G A L + M + +G + D T LL A+ A G HG
Sbjct: 301 WNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPAS----AILEGRTIHGYA 356
Query: 77 IKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAI 136
++ GF H+ ++TALI+MYG A +F+ M K++++WNS++ AY NG+ A+
Sbjct: 357 MRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSAL 416
Query: 137 SLFHMM----PLKDLSSFNILISGYSSCGEVLAARSIFDKMAIK----DIVSWNSILSAC 188
LF + + D ++ ++ Y+ + R I + + + NS++
Sbjct: 417 ELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMY 476
Query: 189 TRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTAT 248
GD+E A F + +K+ +SWN+++ G +V LF EM + P+ T
Sbjct: 477 AMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFA 536
Query: 249 SVLSACAHLGSLETG 263
S+L+AC+ G ++ G
Sbjct: 537 SLLAACSISGMVDEG 551
>AT5G08310.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:2670134-2675254 REVERSE
Length = 1280
Score = 164 bits (416), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 101/324 (31%), Positives = 165/324 (50%), Gaps = 65/324 (20%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTI 77
WN +I+ N E+++ Y+ M G D+ T+P L+K++ + ++G
Sbjct: 822 WNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLG-------- 873
Query: 78 KTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAIS 137
G+LHC+ VK + W
Sbjct: 874 ------------------GSLHCSV----------VKSGLEW------------------ 887
Query: 138 LFHMMPLKDLSSFNILISGYSSCGEVLAARSIFDKMAIKDIVSWNSILSACTRAGDMEKA 197
DL N LI Y S + +AR +FD+M K++V+WNSIL A ++GD+ A
Sbjct: 888 --------DLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSA 939
Query: 198 FALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDE-MKTTNCLPDYLTATSVLSACAH 256
+F EM ++ ++W++M+ G ++RG++++A+++FD+ M+ + + +T SV+ ACAH
Sbjct: 940 RLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAH 999
Query: 257 LGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVK--DIYCWN 314
LG+L G +H Y + L + + T+L+DMYAKCGSI A +F++A VK D WN
Sbjct: 1000 LGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWN 1059
Query: 315 AIISGLALHGHGYAALKLFGYMKK 338
AII GLA HG +L+LF M++
Sbjct: 1060 AIIGGLASHGFIRESLQLFHKMRE 1083
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 101/231 (43%), Gaps = 12/231 (5%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGF-RADNYTFPILLKAAGKNCASRI 68
M +V W+ +I ++ G +A+ + M G +A+ T ++ A A
Sbjct: 946 MSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNR 1005
Query: 69 GFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVK--DLVAWNSMLDAY 126
G H + + +QT+LI+MY DA +F VK D + WN+++
Sbjct: 1006 GKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGL 1065
Query: 127 ASNGEMEDAISLFHMMPLK----DLSSFNILISGYSSCGEVLAA----RSIFDKMAIKDI 178
AS+G + +++ LFH M D +F L++ S G V A +S+ + A
Sbjct: 1066 ASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLKESGAEPKS 1125
Query: 179 VSWNSILSACTRAGDMEKAFALFQEMPMKNTIS-WNTMLAGCLQRGQFSEA 228
+ ++ +RAG ++ A EMP+K T S +L GC+ G A
Sbjct: 1126 EHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLELA 1176
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 67/356 (18%), Positives = 139/356 (39%), Gaps = 52/356 (14%)
Query: 32 EQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTIKTGFYRHIFVQTAL 91
++ + + ++ +G D + +L+KA K C + + + G + ++
Sbjct: 596 DRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSM 655
Query: 92 INMY-------GTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMPL 144
I+ + L C +M+E+ D++ + S++ ++G +AI ++ M
Sbjct: 656 IDGWCKEGEIDRGLSCIV---RMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKG 712
Query: 145 KDLS----SFNILISGYSSCGEVLAARSIFDKMAIK----DIVSWNSILSACTRAGDMEK 196
KD +F LI G CG A F +M K D + S++S+ + ++
Sbjct: 713 KDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINA 772
Query: 197 AFALFQEMPMKNTI----------------------------------SWNTMLAGCLQR 222
F +F+EM K WN ++ G
Sbjct: 773 GFGIFREMVHKGRFPVSVDRNYMLAVNVTSDVDYAYKFLSKLSDPPNYGWNFVIRGFSNS 832
Query: 223 GQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVT 282
+++ ++ +M LPD++T ++ + + L + + G +H + SGL +
Sbjct: 833 RNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFIC 892
Query: 283 TALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMKK 338
L+ MY A ++F + K++ WN+I+ A G +A +F M +
Sbjct: 893 NTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSE 948
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/257 (18%), Positives = 110/257 (42%), Gaps = 16/257 (6%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTI 77
+N II+ G +E+++ M+ G +T + + C +
Sbjct: 477 YNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMR 536
Query: 78 KTGFYRHIFVQTALINMYGTLHCTADACKMFENMP----VKDLVAWNSMLDAYASNGEME 133
GF I T L+ DACK +++ + +VA + +D N ++
Sbjct: 537 FYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVD 596
Query: 134 DAISLFHMM----PLKDLSSFNILISGYSSCGEVLAARSIFDKMAIK----DIVSWNSIL 185
+ LF + D+ ++++LI + A +F++M K + ++NS++
Sbjct: 597 RGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMI 656
Query: 186 SACTRAGDMEKAFA----LFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCL 241
+ G++++ + ++++ + I++ +++ G G+ SEA+ ++EMK +C
Sbjct: 657 DGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCY 716
Query: 242 PDYLTATSVLSACAHLG 258
P+ +T +++ G
Sbjct: 717 PNRITFMALIQGLCKCG 733
>AT1G17630.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:6064525-6066720 FORWARD
Length = 731
Score = 164 bits (415), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 106/407 (26%), Positives = 180/407 (44%), Gaps = 86/407 (21%)
Query: 14 EVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGF--A 71
++R WN I+K ++ G E A+ Y M+ G D Y P++L+A R G A
Sbjct: 122 DLRLWNSILKANVSHGLYENALELYRGMRQRGLTGDGYILPLILRAC--RYLGRFGLCRA 179
Query: 72 FHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASN-- 129
FH Q I+ G ++ V L+ +Y DA +F MPV++ ++WN M+ ++
Sbjct: 180 FHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYD 239
Query: 130 ---------------------------------GEMEDAISLFHMMPLKD---------- 146
G+ ED + FH+M +
Sbjct: 240 CESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAV 299
Query: 147 -----------------------------LSSFNILISGYSSCGEVLAARSIFDKMAIKD 177
L S N LI Y G+V A +F ++ K
Sbjct: 300 FFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKG 359
Query: 178 IVSWNSILSACTRAGDMEKAFALFQEMP--------MKNTISWNTMLAGCLQRGQFSEAV 229
I SWNS++++ AG +++A +LF E+ N ++W +++ GC +G+ +++
Sbjct: 360 IESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSL 419
Query: 230 DLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMY 289
+ F +M+ + L + +T +LS CA L +L G +IH + I + ++ + V AL++MY
Sbjct: 420 EYFRQMQFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMY 479
Query: 290 AKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYM 336
AKCG + + +F + KD+ WN+II G +HG AL +F M
Sbjct: 480 AKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRM 526
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 136/314 (43%), Gaps = 49/314 (15%)
Query: 73 HGQTIKTGF-YRHIFVQTALINMYGTLHCTADACKMFENMPV---KDLVAWNSMLDAYAS 128
H Q + + F +R + LI++Y L DA +FE + + DL WNS+L A S
Sbjct: 76 HAQVLLSDFIFRSGSLAANLISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILKANVS 135
Query: 129 NGEMEDAISLFHMMPLKDLSS----FNILISGYSSCGEVLAARSIFDKMAIK-----DIV 179
+G E+A+ L+ M + L+ +++ G R+ F I+ ++
Sbjct: 136 HGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRA-FHTQVIQIGLKENLH 194
Query: 180 SWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTN 239
N +L+ +AG M A+ LF EMP++N +SWN M+ G Q AV +F+ M+
Sbjct: 195 VVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREE 254
Query: 240 CLPDYLTATSVL-----------------------------------SACAHLGSLETGI 264
PD +T TSVL S CA L +L
Sbjct: 255 FKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAE 314
Query: 265 KIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHG 324
K+H Y I G AL+ +Y K G ++ A +F + + K I WN++I+ G
Sbjct: 315 KVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAG 374
Query: 325 HGYAALKLFGYMKK 338
AL LF +++
Sbjct: 375 KLDEALSLFSELEE 388
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/333 (21%), Positives = 145/333 (43%), Gaps = 50/333 (15%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTI 77
W ++ H G E + + M++ G + + A I HG I
Sbjct: 262 WTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVI 321
Query: 78 KTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAIS 137
K GF ++ + ALI++YG DA +F + K + +WNS++ ++ G++++A+S
Sbjct: 322 KGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALS 381
Query: 138 LF-------HMMPLK-DLSSFNILISGYSSCGEVLAARSIFDKMAI-------------- 175
LF H+ +K ++ ++ +I G + G + F +M
Sbjct: 382 LFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCIL 441
Query: 176 -------------------------KDIVSWNSILSACTRAGDMEKAFALFQEMPMKNTI 210
++I+ N++++ + G + + +F+ + K+ I
Sbjct: 442 SICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLI 501
Query: 211 SWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYA 270
SWN+++ G G +A+ +FD M ++ PD + +VLSAC+H G +E G +I Y+
Sbjct: 502 SWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREI-FYS 560
Query: 271 IYS--GLASSPHVTTALMDMYAKCGSIEQALQI 301
+ GL ++D+ + G +++A +I
Sbjct: 561 MSKRFGLEPQQEHYACIVDLLGRVGFLKEASEI 593
>AT3G47840.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:17651912-17654032 FORWARD
Length = 706
Score = 164 bits (415), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 171/339 (50%), Gaps = 10/339 (2%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQV--HGFRADNYTFPILLKAAGKNCASR 67
MP ++ W IIK+++ N+++A++ + M+V H D ++LKA G++
Sbjct: 66 MPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKACGQSSNIA 125
Query: 68 IGFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYA 127
G + H +KT ++V ++L++MY + +C++F MP ++ V W +++
Sbjct: 126 YGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLV 185
Query: 128 SNGEMEDAISLFHMM----PLKDLSSFNILISGYSSCGEVLAARSIFDKMAIKDIVSW-- 181
G ++ ++ F M L D +F I + + +V ++I + ++ V+
Sbjct: 186 HAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLC 245
Query: 182 --NSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTN 239
NS+ + T G+M+ LF+ M ++ +SW +++ + GQ +AV+ F +M+ +
Sbjct: 246 VANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQ 305
Query: 240 CLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQAL 299
P+ T S+ SACA L L G ++H + GL S V+ ++M MY+ CG++ A
Sbjct: 306 VPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSAS 365
Query: 300 QIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMKK 338
+F + +DI W+ II G G G K F +M++
Sbjct: 366 VLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQ 404
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 101/340 (29%), Positives = 157/340 (46%), Gaps = 14/340 (4%)
Query: 6 CNCF--MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKN 63
C F MP W II + G ++ + + M +D YTF I LKA
Sbjct: 163 CRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGL 222
Query: 64 CASRIGFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSML 123
+ G A H I GF + V +L MY D +FENM +D+V+W S++
Sbjct: 223 RQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLI 282
Query: 124 DAYASNGEMEDAISLFHMMPLKDLS-SFNILISGYSSC--------GEVLAARSIFDKMA 174
AY G+ A+ F M + + S +S+C GE L + +
Sbjct: 283 VAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVL--SLG 340
Query: 175 IKDIVSW-NSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFD 233
+ D +S NS++ + G++ A LFQ M ++ ISW+T++ G Q G E F
Sbjct: 341 LNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFS 400
Query: 234 EMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCG 293
M+ + P S+LS ++ +E G ++H A+ GL + V ++L++MY+KCG
Sbjct: 401 WMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCG 460
Query: 294 SIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLF 333
SI++A IF + DI A+I+G A HG A+ LF
Sbjct: 461 SIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLF 500
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 121/245 (49%), Gaps = 12/245 (4%)
Query: 104 ACKMFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMPL------KDLSSFNILIS-- 155
A ++F+ MP D+V+W S++ Y + ++A+ LF M + D S ++++
Sbjct: 59 ARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKAC 118
Query: 156 GYSSC---GEVLAARSIFDKMAIKDIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISW 212
G SS GE L A ++ + + + +S+L R G ++K+ +F EMP +N ++W
Sbjct: 119 GQSSNIAYGESLHAYAVKTSL-LSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTW 177
Query: 213 NTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIY 272
++ G + G++ E + F EM + L D T L ACA L ++ G IH + I
Sbjct: 178 TAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIV 237
Query: 273 SGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKL 332
G ++ V +L MY +CG ++ L +F +D+ W ++I G A++
Sbjct: 238 RGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVET 297
Query: 333 FGYMK 337
F M+
Sbjct: 298 FIKMR 302
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 82/159 (51%), Gaps = 2/159 (1%)
Query: 182 NSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTN-- 239
NS L + AG++ A +F +MP + +SW +++ + EA+ LF M+ +
Sbjct: 44 NSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHA 103
Query: 240 CLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQAL 299
PD + VL AC ++ G +H YA+ + L SS +V ++L+DMY + G I+++
Sbjct: 104 VSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSC 163
Query: 300 QIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMKK 338
++F + ++ W AII+GL G L F M +
Sbjct: 164 RVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSR 202
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 120/267 (44%), Gaps = 18/267 (6%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCAS--R 67
M +V W +I + +G +AV T++ M+ + TF + A CAS R
Sbjct: 270 MSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSA----CASLSR 325
Query: 68 I--GFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDA 125
+ G H + G + V +++ MY T A +F+ M +D+++W++++
Sbjct: 326 LVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGG 385
Query: 126 YASNGEMEDAISLFHMMPLKDLSSFNI----LISGYSSCGEVLAARSIFDKMAI-----K 176
Y G E+ F M + L+S + + R + +A+ +
Sbjct: 386 YCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVH-ALALCFGLEQ 444
Query: 177 DIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMK 236
+ +S+++ ++ G +++A +F E + +S M+ G + G+ EA+DLF++
Sbjct: 445 NSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSL 504
Query: 237 TTNCLPDYLTATSVLSACAHLGSLETG 263
PD +T SVL+AC H G L+ G
Sbjct: 505 KVGFRPDSVTFISVLTACTHSGQLDLG 531
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 118/286 (41%), Gaps = 23/286 (8%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
M ++ W+ II + G E+ + M+ G + ++ LL +G G
Sbjct: 371 MRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGG 430
Query: 70 FAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASN 129
H + G ++ V+++LINMY +A +F D+V+ +M++ YA +
Sbjct: 431 RQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEH 490
Query: 130 GEMEDAISLFHMMPLK-----DLSSFNILISGYSSCGEVLAARSIFDKM-------AIKD 177
G+ ++AI LF LK D +F +++ + G++ F+ M K+
Sbjct: 491 GKSKEAIDLFEK-SLKVGFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKE 549
Query: 178 IVSWNSILSACTRAGDMEKAFALFQEMP-MKNTISWNTMLAGCLQRGQFS---EAVDLFD 233
+ ++ RAG + A + EM K+ + W T+L C +G A +
Sbjct: 550 --HYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACKAKGDIERGRRAAERIL 607
Query: 234 EMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSP 279
E+ T C +T ++ S+ G+LE + G+ P
Sbjct: 608 ELDPT-CATALVTLANIYSST---GNLEEAANVRKNMKAKGVIKEP 649
>AT4G18520.1 | Symbols: | INVOLVED IN: biological_process unknown;
EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 9
growth stages; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT4G39530.1); Has
16698 Blast hits to 4567 proteins in 114 species: Archae
- 0; Bacteria - 4; Metazoa - 97; Fungi - 32; Plants -
16266; Viruses - 0; Other Eukaryotes - 299 (source: NCBI
BLink). | chr4:10215250-10217103 REVERSE
Length = 617
Score = 163 bits (413), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 105/337 (31%), Positives = 172/337 (51%), Gaps = 10/337 (2%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
M +V W +I G+ +A+ ++ M H F + +T +LKA + A R G
Sbjct: 244 MEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFG 303
Query: 70 FAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASN 129
H +K +FV T+L++MY +D K+F+ M ++ V W S++ A+A
Sbjct: 304 RQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHARE 363
Query: 130 GEMEDAISLFHMMPLKDLSSFNI-LISGYSSCGEV---LAARSIFDKMAIKDIVSWNSIL 185
G E+AISLF +M + L + N+ ++S +CG V L + + ++ IK+ + N +
Sbjct: 364 GFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQI-IKNSIEKNVYI 422
Query: 186 SACT-----RAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNC 240
+ + G+ AF + Q++P ++ +SW M++GC G SEA+D EM
Sbjct: 423 GSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGV 482
Query: 241 LPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQ 300
P+ T +S L ACA+ SL G IH A + S+ V +AL+ MYAKCG + +A +
Sbjct: 483 EPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFR 542
Query: 301 IFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMK 337
+F K++ W A+I G A +G ALKL M+
Sbjct: 543 VFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRME 579
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 155/340 (45%), Gaps = 18/340 (5%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYT-FPILLKAAGKNCASRI 68
MP W +I ++ G ++A + + HG R N F LL + +
Sbjct: 143 MPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFEL 202
Query: 69 GFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYAS 128
G HG +K G ++ V+++L+ Y A + F+ M KD+++W +++ A +
Sbjct: 203 GRQVHGNMVKVGV-GNLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSR 261
Query: 129 NGEMEDAISLF-----HMMPLKDLSSFNILISGYSSCGEVLAAR------SIFDKMAIK- 176
G AI +F H + + +IL +C E A R S+ K IK
Sbjct: 262 KGHGIKAIGMFIGMLNHWFLPNEFTVCSIL----KACSEEKALRFGRQVHSLVVKRMIKT 317
Query: 177 DIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMK 236
D+ S++ + G++ +F M +NT++W +++A + G EA+ LF MK
Sbjct: 318 DVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMK 377
Query: 237 TTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIE 296
+ + + LT S+L AC +G+L G ++H I + + + ++ + L+ +Y KCG
Sbjct: 378 RRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESR 437
Query: 297 QALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYM 336
A + + +D+ W A+ISG + GH AL M
Sbjct: 438 DAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEM 477
Score = 118 bits (295), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 122/243 (50%), Gaps = 8/243 (3%)
Query: 104 ACKMFENMPVKDLVAWNSMLDAYASNGEMEDAISLF-----HMMPLKDLSSFNILISGYS 158
A K+F++MP K+ V W +M+D Y G ++A +LF H + + F L++ S
Sbjct: 136 ARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCS 195
Query: 159 SCGEVLAARSIFD---KMAIKDIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTM 215
E R + K+ + +++ +S++ + G++ A F M K+ ISW +
Sbjct: 196 RRAEFELGRQVHGNMVKVGVGNLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAV 255
Query: 216 LAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGL 275
++ C ++G +A+ +F M LP+ T S+L AC+ +L G ++H + +
Sbjct: 256 ISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMI 315
Query: 276 ASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGY 335
+ V T+LMDMYAKCG I ++F ++ W +II+ A G G A+ LF
Sbjct: 316 KTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRI 375
Query: 336 MKK 338
MK+
Sbjct: 376 MKR 378
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 119/249 (47%), Gaps = 10/249 (4%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTI 77
W II H G E+A+ + M+ A+N T +L+A G A +G H Q I
Sbjct: 353 WTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQII 412
Query: 78 KTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAIS 137
K +++++ + L+ +Y + DA + + +P +D+V+W +M+ +S G +A+
Sbjct: 413 KNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALD 472
Query: 138 LFHMMPLKDLS----SFNILISGYSSCGEVLAARSIFD----KMAIKDIVSWNSILSACT 189
M + + +++ + ++ +L RSI A+ ++ ++++
Sbjct: 473 FLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYA 532
Query: 190 RAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNC-LPDYLTAT 248
+ G + +AF +F MP KN +SW M+ G + G EA+ L M+ + DY+ AT
Sbjct: 533 KCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFAT 592
Query: 249 SVLSACAHL 257
+LS C +
Sbjct: 593 -ILSTCGDI 600
>AT1G11290.1 | Symbols: CRR22 | CRR22 (CHLORORESPIRATORY
REDUCTION22); endonuclease | chr1:3791454-3793883
REVERSE
Length = 809
Score = 163 bits (413), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 118/430 (27%), Positives = 180/430 (41%), Gaps = 109/430 (25%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTI 77
++ ++K V + ++A+ +V M+ Y F LLK G R+G HG +
Sbjct: 103 YHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLV 162
Query: 78 KTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAIS 137
K+GF +F T L NMY +A K+F+ MP +DLV+WN+++ Y+ NG A+
Sbjct: 163 KSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALE 222
Query: 138 LFHMMPLKDL------------------------------------SSFNI---LISGYS 158
+ M ++L S NI L+ Y+
Sbjct: 223 MVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYA 282
Query: 159 SCGEVLAARSIFDKMAIKDIVSWNSI---------------------------------- 184
CG + AR +FD M +++VSWNS+
Sbjct: 283 KCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMG 342
Query: 185 -LSACTRAGDMEK-----------------------------------AFALFQEMPMKN 208
L AC GD+E+ A ++F ++ +
Sbjct: 343 ALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRT 402
Query: 209 TISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHV 268
+SWN M+ G Q G+ +A++ F +M++ PD T SV++A A L IH
Sbjct: 403 LVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHG 462
Query: 269 YAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYA 328
+ S L + VTTAL+DMYAKCG+I A IF + + WNA+I G HG G A
Sbjct: 463 VVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKA 522
Query: 329 ALKLFGYMKK 338
AL+LF M+K
Sbjct: 523 ALELFEEMQK 532
Score = 125 bits (313), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 135/267 (50%), Gaps = 8/267 (2%)
Query: 78 KTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAIS 137
K G Y+ F QT L++++ +A ++FE + K V +++ML +A +++ A+
Sbjct: 62 KNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQ 121
Query: 138 LFHMMPLKDLS----SFNILISGYSSCGEVLAARSIFDKMAIK----DIVSWNSILSACT 189
F M D+ +F L+ E+ + I + D+ + + +
Sbjct: 122 FFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYA 181
Query: 190 RAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATS 249
+ + +A +F MP ++ +SWNT++AG Q G A+++ M N P ++T S
Sbjct: 182 KCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVS 241
Query: 250 VLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKD 309
VL A + L + G +IH YA+ SG S +++TAL+DMYAKCGS+E A Q+F ++
Sbjct: 242 VLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERN 301
Query: 310 IYCWNAIISGLALHGHGYAALKLFGYM 336
+ WN++I + + A+ +F M
Sbjct: 302 VVSWNSMIDAYVQNENPKEAMLIFQKM 328
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 147/329 (44%), Gaps = 20/329 (6%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
M V WN +I ++ N ++A+L + M G + + + L A G
Sbjct: 297 MLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERG 356
Query: 70 FAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASN 129
H +++ G R++ V +LI+MY A MF + + LV+WN+M+ +A N
Sbjct: 357 RFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQN 416
Query: 130 GEMEDAISLFHMMPLKDLSSFNIL-ISGYSSCGEV-----------LAARSIFDKMAIKD 177
G DA++ F M + + +S ++ E+ + RS DK +
Sbjct: 417 GRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDK----N 472
Query: 178 IVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKT 237
+ +++ + G + A +F M ++ +WN M+ G G A++LF+EM+
Sbjct: 473 VFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQK 532
Query: 238 TNCLPDYLTATSVLSACAHLGSLETGIKIH--VYAIYSGLASSPHVTTALMDMYAKCGSI 295
P+ +T SV+SAC+H G +E G+K + YS S H A++D+ + G +
Sbjct: 533 GTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHY-GAMVDLLGRAGRL 591
Query: 296 EQALQIFFKAQVKD-IYCWNAIISGLALH 323
+A + VK + + A++ +H
Sbjct: 592 NEAWDFIMQMPVKPAVNVYGAMLGACQIH 620
>AT1G15510.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:5329111-5331711 FORWARD
Length = 866
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 106/329 (32%), Positives = 160/329 (48%), Gaps = 9/329 (2%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNM-QVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQT 76
WN ++ + G ++A+ Y M V G + D YTFP +L+ G G H
Sbjct: 163 WNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHV 222
Query: 77 IKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAI 136
++ G+ I V ALI MY A +F+ MP +D+++WN+M+ Y NG + +
Sbjct: 223 VRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGL 282
Query: 137 SLFHMMP----LKDLSSFNILISGYSSCGEVLAARSIFDKMAIK----DIVSWNSILSAC 188
LF M DL + +IS G+ R I + DI NS+
Sbjct: 283 ELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMY 342
Query: 189 TRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTAT 248
AG +A LF M K+ +SW TM++G +A+D + M + PD +T
Sbjct: 343 LNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVA 402
Query: 249 SVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVK 308
+VLSACA LG L+TG+++H AI + L S V L++MY+KC I++AL IF K
Sbjct: 403 AVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRK 462
Query: 309 DIYCWNAIISGLALHGHGYAALKLFGYMK 337
++ W +II+GL L+ + AL MK
Sbjct: 463 NVISWTSIIAGLRLNNRCFEALIFLRQMK 491
Score = 132 bits (331), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 96/337 (28%), Positives = 163/337 (48%), Gaps = 10/337 (2%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
MP ++ WN +I + G + + + M+ D T ++ A R+G
Sbjct: 257 MPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLG 316
Query: 70 FAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASN 129
H I TGF I V +L MY +A K+F M KD+V+W +M+ Y N
Sbjct: 317 RDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYN 376
Query: 130 GEMEDAISLFHMMPLKDLSSFNILISGY-SSCGEV--LAARSIFDKMAIKD-----IVSW 181
+ AI + MM + I ++ S+C + L K+AIK ++
Sbjct: 377 FLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVA 436
Query: 182 NSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCL 241
N++++ ++ ++KA +F +P KN ISW +++AG + EA+ +MK T
Sbjct: 437 NNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKMT-LQ 495
Query: 242 PDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQI 301
P+ +T T+ L+ACA +G+L G +IH + + +G+ + AL+DMY +CG + A
Sbjct: 496 PNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQ 555
Query: 302 FFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMKK 338
F +Q KD+ WN +++G + G G ++LF M K
Sbjct: 556 -FNSQKKDVTSWNILLTGYSERGQGSMVVELFDRMVK 591
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 142/303 (46%), Gaps = 15/303 (4%)
Query: 29 GNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTIKTGFYRHIFVQ 88
G E+A+ +MQ D F L++ A G + + + + +
Sbjct: 73 GKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELG 132
Query: 89 TALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMM-----P 143
A + M+ DA +F M ++L +WN ++ YA G ++A+ L+H M
Sbjct: 133 NAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGV 192
Query: 144 LKDLSSFNILISGYSSCGEV--LAARSIFDKMAIK-----DIVSWNSILSACTRAGDMEK 196
D+ +F ++ +CG + LA ++ DI N++++ + GD++
Sbjct: 193 KPDVYTFPCVLR---TCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKS 249
Query: 197 AFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAH 256
A LF MP ++ ISWN M++G + G E ++LF M+ + PD +T TSV+SAC
Sbjct: 250 ARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACEL 309
Query: 257 LGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAI 316
LG G IH Y I +G A V +L MY GS +A ++F + + KDI W +
Sbjct: 310 LGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTM 369
Query: 317 ISG 319
ISG
Sbjct: 370 ISG 372
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 137/327 (41%), Gaps = 19/327 (5%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
M ++ W +I + ++A+ TY M + D T +L A G
Sbjct: 358 MERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTG 417
Query: 70 FAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASN 129
H IK ++ V LINMY C A +F N+P K++++W S++ N
Sbjct: 418 VELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLN 477
Query: 130 GEMEDAISLFHMMPLKDLSSFNILIS--------GYSSCGEVLAARSIFDKMAIKDIVSW 181
+A+ M + + L + G CG+ + A + + + D +
Sbjct: 478 NRCFEALIFLRQMKMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLP- 536
Query: 182 NSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCL 241
N++L R G M A++ F K+ SWN +L G +RGQ S V+LFD M +
Sbjct: 537 NALLDMYVRCGRMNTAWSQFNSQK-KDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVR 595
Query: 242 PDYLTATSVLSACAHLGSLETGI----KIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQ 297
PD +T S+L C+ + G+ K+ Y + L ++D+ + G +++
Sbjct: 596 PDEITFISLLCGCSKSQMVRQGLMYFSKMEDYGVTPNLKH----YACVVDLLGRAGELQE 651
Query: 298 ALQIFFKAQV-KDIYCWNAIISGLALH 323
A + K V D W A+++ +H
Sbjct: 652 AHKFIQKMPVTPDPAVWGALLNACRIH 678
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 107/224 (47%), Gaps = 9/224 (4%)
Query: 123 LDAYASNGEMEDAISLFH-MMPLKDLSSFNILISGYSSCGEVLAARS-------IFDKMA 174
L +NG++E+A+ L + M L+ ++ ++ C A M+
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMS 125
Query: 175 IKDIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDE 234
+ N+ L+ R G++ A+ +F +M +N SWN ++ G ++G F EA+ L+
Sbjct: 126 SLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHR 185
Query: 235 MKTTNCL-PDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCG 293
M + PD T VL C + L G ++HV+ + G V AL+ MY KCG
Sbjct: 186 MLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCG 245
Query: 294 SIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMK 337
++ A +F + +DI WNA+ISG +G + L+LF M+
Sbjct: 246 DVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMR 289
>AT2G21090.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9045695-9047488 REVERSE
Length = 597
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 111/389 (28%), Positives = 176/389 (45%), Gaps = 72/389 (18%)
Query: 22 IKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTIKTGF 81
+ KH QAV ++ G R LL+ G + + G H TGF
Sbjct: 18 LSKHATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKWIHRHLKITGF 77
Query: 82 YR-HIFVQTALINMYGTLHCTADACKMFE------------------------------- 109
R + + LI MY DACK+F+
Sbjct: 78 KRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFD 137
Query: 110 NMPVKDLVAWNSMLDAYASNGEMEDAISLF-------------------------HMMPL 144
+MP +D+V+WN+M+ YA +G + +A+ + + L
Sbjct: 138 SMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQL 197
Query: 145 KDLSSFNILISG--------------YSSCGEVLAARSIFDKMAIKDIVSWNSILSACTR 190
+ +L++G Y+ CG++ +A+ FD+M +KDI W +++S +
Sbjct: 198 NRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAK 257
Query: 191 AGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSV 250
GDME A LF EMP KN +SW ++AG +++G + A+DLF +M P+ T +S
Sbjct: 258 LGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSC 317
Query: 251 LSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVK-D 309
L A A + SL G +IH Y I + + + V ++L+DMY+K GS+E + ++F K D
Sbjct: 318 LCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHD 377
Query: 310 IYCWNAIISGLALHGHGYAALKLFGYMKK 338
WN +IS LA HG G+ AL++ M K
Sbjct: 378 CVFWNTMISALAQHGLGHKALRMLDDMIK 406
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/358 (23%), Positives = 156/358 (43%), Gaps = 42/358 (11%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
MP +V WN ++ + GN +A+ Y + G + + ++F LL A K+ ++
Sbjct: 139 MPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLN 198
Query: 70 FAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASN 129
HGQ + GF ++ + ++I+ Y A + F+ M VKD+ W +++ YA
Sbjct: 199 RQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKL 258
Query: 130 GEMEDAISLFHMMPLKDLSSFNILISGYSSCGEVLAARSIFDKMAIKDIVSWNSILSAC- 188
G+ME A LF MP K+ S+ LI+GY G A +F KM + S+C
Sbjct: 259 GDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCL 318
Query: 189 --------------------------------------TRAGDMEKAFALFQEMPMK-NT 209
+++G +E + +F+ K +
Sbjct: 319 CASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDC 378
Query: 210 ISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIK-IHV 268
+ WNTM++ Q G +A+ + D+M P+ T +L+AC+H G +E G++
Sbjct: 379 VFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFES 438
Query: 269 YAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVK-DIYCWNAIISGLALHGH 325
+ G+ L+D+ + G ++ ++ + + D + WNAI+ +HG+
Sbjct: 439 MTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDKHIWNAILGVCRIHGN 496
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 105/243 (43%), Gaps = 19/243 (7%)
Query: 8 CFMPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASR 67
C MP W +I ++ G+ +A+ + M G + + +TF L A+ + R
Sbjct: 269 CEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLR 328
Query: 68 IGFAFHGQTIKTGFYRHIFVQTALINMY---GTLHCTADACKMFENMPVKDLVAWNSMLD 124
G HG I+T + V ++LI+MY G+L + ++ ++ D V WN+M+
Sbjct: 329 HGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDK--HDCVFWNTMIS 386
Query: 125 AYASNG------EMEDAISLFHMMPLKDLSSFNILISGYSSCGEVLAARSIFDKMAIK-- 176
A A +G M D + F + P + ++ ++++ S G V F+ M ++
Sbjct: 387 ALAQHGLGHKALRMLDDMIKFRVQP--NRTTLVVILNACSHSGLVEEGLRWFESMTVQHG 444
Query: 177 ---DIVSWNSILSACTRAGDMEKAFALFQEMPMK-NTISWNTMLAGCLQRGQFSEAVDLF 232
D + ++ RAG ++ +EMP + + WN +L C G
Sbjct: 445 IVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAA 504
Query: 233 DEM 235
DE+
Sbjct: 505 DEL 507
>AT5G55740.1 | Symbols: CRR21 | CRR21 (chlororespiratory reduction
21) | chr5:22561941-22564433 REVERSE
Length = 830
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 104/347 (29%), Positives = 174/347 (50%), Gaps = 13/347 (3%)
Query: 3 LLVCNCFMPSLEVRR---WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKA 59
L + L VR W II +G E A++ +V M + DN+ P + KA
Sbjct: 123 LEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKA 182
Query: 60 AGKNCASRIGFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAW 119
G SR G HG +K+G +FV ++L +MYG DA K+F+ +P ++ VAW
Sbjct: 183 CGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAW 242
Query: 120 NSMLDAYASNGEMEDAISLFHMMPLKDLSSFNILIS---------GYSSCGEVLAARSIF 170
N+++ Y NG+ E+AI LF M + + + +S G G+ A +I
Sbjct: 243 NALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIV 302
Query: 171 DKMAIKDIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVD 230
+ M + +I+ S+L+ + G +E A +F M K+ ++WN +++G +Q+G +A+
Sbjct: 303 NGMELDNILG-TSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIY 361
Query: 231 LFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYA 290
+ M+ D +T +++SA A +L+ G ++ Y I S + + +MDMYA
Sbjct: 362 MCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYA 421
Query: 291 KCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMK 337
KCGSI A ++F KD+ WN +++ A G AL+LF M+
Sbjct: 422 KCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQ 468
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 98/325 (30%), Positives = 161/325 (49%), Gaps = 32/325 (9%)
Query: 14 EVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFH 73
+V WN II ++ G E A+ M++ + D T L+ AA + ++G
Sbjct: 339 DVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQ 398
Query: 74 GQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEME 133
I+ F I + + +++MY DA K+F++ KDL+ WN++L AYA +G
Sbjct: 399 CYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSG 458
Query: 134 DAISLFHMMPLKDLSSFNILISGYSSCGEVLAARSIFDKMAIKDIVSWNSILSACTRAGD 193
+A+ LF+ M L+ + ++++WN I+ + R G
Sbjct: 459 EALRLFYGMQLEGVPP---------------------------NVITWNLIILSLLRNGQ 491
Query: 194 MEKAFALFQEMP----MKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATS 249
+++A +F +M + N ISW TM+ G +Q G EA+ +M+ + P+ + T
Sbjct: 492 VDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITV 551
Query: 250 VLSACAHLGSLETGIKIHVYAIYSGLASS-PHVTTALMDMYAKCGSIEQALQIFFKAQVK 308
LSACAHL SL G IH Y I + SS + T+L+DMYAKCG I +A ++F
Sbjct: 552 ALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYS 611
Query: 309 DIYCWNAIISGLALHGHGYAALKLF 333
++ NA+IS AL+G+ A+ L+
Sbjct: 612 ELPLSNAMISAYALYGNLKEAIALY 636
Score = 114 bits (286), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 144/306 (47%), Gaps = 10/306 (3%)
Query: 29 GNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTIKTG-FY-RHIF 86
G ++A+ M R + +L+ G H + +K G FY R+ +
Sbjct: 49 GEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARILKNGDFYARNEY 108
Query: 87 VQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMPLKD 146
++T L+ Y A +F + V+++ +W +++ G E A+ F M +
Sbjct: 109 IETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENE 168
Query: 147 LSSFNILISGY-SSCGEVLAAR------SIFDKMAIKDIV-SWNSILSACTRAGDMEKAF 198
+ N ++ +CG + +R K ++D V +S+ + G ++ A
Sbjct: 169 IFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDAS 228
Query: 199 ALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLG 258
+F E+P +N ++WN ++ G +Q G+ EA+ LF +M+ P +T ++ LSA A++G
Sbjct: 229 KVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMG 288
Query: 259 SLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIIS 318
+E G + H AI +G+ + T+L++ Y K G IE A +F + KD+ WN IIS
Sbjct: 289 GVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIIS 348
Query: 319 GLALHG 324
G G
Sbjct: 349 GYVQQG 354
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 102/231 (44%), Gaps = 32/231 (13%)
Query: 129 NGEMEDAISLFHMMPLKDLSSFNILISGYSSCGEVLAARSIFDKMAIKDIVSWNSILSAC 188
NGE+++A+SL M ++L G GE+L ++++ D+ + I +
Sbjct: 48 NGEIKEALSLVTEMDFRNLRI------GPEIYGEILQG-CVYER----DLSTGKQIHARI 96
Query: 189 TRAGD---------------------MEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSE 227
+ GD +E A LF ++ ++N SW ++ + G
Sbjct: 97 LKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEG 156
Query: 228 AVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMD 287
A+ F EM PD +V AC L G +H Y + SGL V ++L D
Sbjct: 157 ALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLAD 216
Query: 288 MYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMKK 338
MY KCG ++ A ++F + ++ WNA++ G +G A++LF M+K
Sbjct: 217 MYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRK 267
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 119/277 (42%), Gaps = 20/277 (7%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTI 77
W ++ + G +E+A+L MQ G R + ++ + L A + IG HG I
Sbjct: 514 WTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYII 573
Query: 78 KTGFYRHIF-VQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAI 136
+ + + ++T+L++MY A K+F + +L N+M+ AYA G +++AI
Sbjct: 574 RNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAI 633
Query: 137 SLFHMMPLKDLSSFNILISGY-SSC---GEVLAARSIFDKMAIKDIVSWNS--------- 183
+L+ + L NI I+ S+C G++ A IF DIVS S
Sbjct: 634 ALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIF-----TDIVSKRSMKPCLEHYG 688
Query: 184 -ILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLP 242
++ AG+ EKA L +EMP K L + + +E VD +
Sbjct: 689 LMVDLLASAGETEKALRLIEEMPFKPDARMIQSLVASCNKQRKTELVDYLSRKLLESEPE 748
Query: 243 DYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSP 279
+ ++ +A A GS + +K+ GL P
Sbjct: 749 NSGNYVTISNAYAVEGSWDEVVKMREMMKAKGLKKKP 785
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD
Length = 743
Score = 162 bits (409), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 109/368 (29%), Positives = 172/368 (46%), Gaps = 43/368 (11%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRAD--NYTFPILLKAAGKNCASR 67
+P + WN +I+ + L G AV Y N + F A+ T +LK + N
Sbjct: 98 LPDRDGVTWNVLIEGYSLSGLVGAAVKAY-NTMMRDFSANLTRVTLMTMLKLSSSNGHVS 156
Query: 68 IGFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYA 127
+G HGQ IK GF ++ V + L+ MY + C +DA K+F + ++ V +NS++
Sbjct: 157 LGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLL 216
Query: 128 SNGEMEDAISLFHMMPLKDLSSFNILISGYSSCGEVLAARSIFDKMAIK----DIVSWNS 183
+ G +EDA+ LF M KD S+ +I G + G A F +M ++ D + S
Sbjct: 217 ACGMIEDALQLFRGME-KDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGS 275
Query: 184 ILSACTRAGDMEK-----------------------------------AFALFQEMPMKN 208
+L AC G + + A +F M KN
Sbjct: 276 VLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKN 335
Query: 209 TISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHV 268
+SW M+ G Q G+ EAV +F +M+ + PD+ T +SACA++ SLE G + H
Sbjct: 336 VVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHG 395
Query: 269 YAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYA 328
AI SGL V+ +L+ +Y KCG I+ + ++F + V+D W A++S A G
Sbjct: 396 KAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVE 455
Query: 329 ALKLFGYM 336
++LF M
Sbjct: 456 TIQLFDKM 463
Score = 138 bits (347), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 92/315 (29%), Positives = 155/315 (49%), Gaps = 17/315 (5%)
Query: 3 LLVCNCFMPSLEVRR--------WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFP 54
LL C +L++ R W +IK G A++A+ + M+V G + D Y F
Sbjct: 215 LLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFG 274
Query: 55 ILLKAAGKNCASRIGFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVK 114
+L A G A G H I+T F HI+V +ALI+MY C A +F+ M K
Sbjct: 275 SVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQK 334
Query: 115 DLVAWNSMLDAYASNGEMEDAISLFHMMPLKDLSSFN-ILISGYSSCGEV--LAARSIFD 171
++V+W +M+ Y G E+A+ +F M + + L S+C V L S F
Sbjct: 335 NVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFH 394
Query: 172 KMAIKD-----IVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFS 226
AI + NS+++ + GD++ + LF EM +++ +SW M++ Q G+
Sbjct: 395 GKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAV 454
Query: 227 EAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIK-IHVYAIYSGLASSPHVTTAL 285
E + LFD+M PD +T T V+SAC+ G +E G + + G+ S + +
Sbjct: 455 ETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCM 514
Query: 286 MDMYAKCGSIEQALQ 300
+D++++ G +E+A++
Sbjct: 515 IDLFSRSGRLEEAMR 529
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 133/295 (45%), Gaps = 41/295 (13%)
Query: 84 HIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAISLFH--- 140
++F L+ Y ++ FE +P +D V WN +++ Y+ +G + A+ ++
Sbjct: 71 NLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMM 130
Query: 141 -----------MMPLKDLSSFN--------------------------ILISGYSSCGEV 163
+M + LSS N L+ Y++ G +
Sbjct: 131 RDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCI 190
Query: 164 LAARSIFDKMAIKDIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRG 223
A+ +F + ++ V +NS++ G +E A LF+ M K+++SW M+ G Q G
Sbjct: 191 SDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGME-KDSVSWAAMIKGLAQNG 249
Query: 224 QFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTT 283
EA++ F EMK D SVL AC LG++ G +IH I + +V +
Sbjct: 250 LAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGS 309
Query: 284 ALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMKK 338
AL+DMY KC + A +F + + K++ W A++ G G A+K+F M++
Sbjct: 310 ALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQR 364
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 134/309 (43%), Gaps = 42/309 (13%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
M V W ++ + G AE+AV +++MQ G D+YT + A + G
Sbjct: 331 MKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEG 390
Query: 70 FAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASN 129
FHG+ I +G ++ V +L+ +YG D+ ++F M V+D V+W +M+ AYA
Sbjct: 391 SQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQF 450
Query: 130 GEMEDAISLFHMMPLKDLSSFNILISGYSSCGEVLAARSIFDKMAIKDIVSWNSILSACT 189
G + I LF M L + ++G ++SAC+
Sbjct: 451 GRAVETIQLFDKMVQHGLKPDGVTLTG---------------------------VISACS 483
Query: 190 RAGDMEKAFALFQEMPMKNTISWNTMLAGCL-----QRGQFSEAVDLFDEMKTTNCLPDY 244
RAG +EK F+ M + I + C+ + G+ EA+ + M PD
Sbjct: 484 RAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFP---PDA 540
Query: 245 LTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVT---TALMDMYAKCGSIEQALQI 301
+ T++LSAC + G+LE G +A S + PH T L +YA G + Q+
Sbjct: 541 IGWTTLLSACRNKGNLEIG----KWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQL 596
Query: 302 FFKAQVKDI 310
+ K++
Sbjct: 597 RRGMREKNV 605
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 103/203 (50%), Gaps = 1/203 (0%)
Query: 137 SLFHMMPLKDLSSFNILISGYSSCGEVLAARSIFDKMAIKDIVSWNSILSACTRAGDMEK 196
++ +P + +N ++ Y+ AR +FD++ ++ SWN++L A ++AG + +
Sbjct: 31 NIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKAGLISE 90
Query: 197 AFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDE-MKTTNCLPDYLTATSVLSACA 255
+ F+++P ++ ++WN ++ G G AV ++ M+ + +T ++L +
Sbjct: 91 MESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSS 150
Query: 256 HLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNA 315
G + G +IH I G S V + L+ MYA G I A ++F+ ++ +N+
Sbjct: 151 SNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNS 210
Query: 316 IISGLALHGHGYAALKLFGYMKK 338
++ GL G AL+LF M+K
Sbjct: 211 LMGGLLACGMIEDALQLFRGMEK 233
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 105/234 (44%), Gaps = 14/234 (5%)
Query: 111 MPVKDLVAWNSMLDAYASNGEMEDAISLFHMMPLKDLSSFNILISGYSSCGEVLAARSIF 170
+P + +N+++ AYA A +F +P +L S+N L+ YS G + S F
Sbjct: 36 LPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKAGLISEMESTF 95
Query: 171 DKMAIKDIVSWNSILSACTRAGDMEKAFALFQEMPMKN------TISWNTMLAGCLQRGQ 224
+K+ +D V+WN ++ + +G + A + M M++ ++ TML G
Sbjct: 96 EKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTM-MRDFSANLTRVTLMTMLKLSSSNGH 154
Query: 225 FSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVT-T 283
S + ++ L + +L A++G + K ++ GL V
Sbjct: 155 VSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKK-----VFYGLDDRNTVMYN 209
Query: 284 ALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMK 337
+LM CG IE ALQ+ F+ KD W A+I GLA +G A++ F MK
Sbjct: 210 SLMGGLLACGMIEDALQL-FRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMK 262
>AT4G39530.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:18374736-18377240 REVERSE
Length = 834
Score = 162 bits (409), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 97/338 (28%), Positives = 175/338 (51%), Gaps = 11/338 (3%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
MP+ + W ++ + ++A+ + +M G + D Y +L + A G
Sbjct: 310 MPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFG 369
Query: 70 FAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASN 129
H TIK +V +LI+MY C DA K+F+ D+V +N+M++ Y+
Sbjct: 370 TQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRL 429
Query: 130 G---EMEDAISLFHMMPLK----DLSSFNILISGYSSCGEVLAARSI----FDKMAIKDI 178
G E+ +A+++F M + L +F L+ +S + ++ I F DI
Sbjct: 430 GTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDI 489
Query: 179 VSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTT 238
+ ++++ + ++ + +F EM +K+ + WN+M AG +Q+ + EA++LF E++ +
Sbjct: 490 FAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLS 549
Query: 239 NCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQA 298
PD T ++++A +L S++ G + H + GL +P++T AL+DMYAKCGS E A
Sbjct: 550 RERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDA 609
Query: 299 LQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYM 336
+ F A +D+ CWN++IS A HG G AL++ M
Sbjct: 610 HKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKM 647
Score = 129 bits (324), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/337 (28%), Positives = 161/337 (47%), Gaps = 15/337 (4%)
Query: 16 RRWNEIIKKHMLVGNAEQAVLTYVNMQVH---GFRADNYTFPILLKAAGKNCASRIGFAF 72
R+ E I+ + ++ ++L +VN G R F LL+ +
Sbjct: 8 RKVQETIRLYSSSSSSASSLLEFVNADFPSTIGIRGRR-EFARLLQLRASDDLLHYQNVV 66
Query: 73 HGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEM 132
HGQ I G ++ LIN+Y A K+FE MP ++LV+W++M+ A +G
Sbjct: 67 HGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIY 126
Query: 133 EDAISLF--HMMPLKD------LSSFNILISGYSSCGE--VLAARSIFDKMAI-KDIVSW 181
E+++ +F KD LSSF SG G V +S K +D+
Sbjct: 127 EESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVG 186
Query: 182 NSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCL 241
++ + G+++ A +F +P K+T++W TM++GC++ G+ ++ LF ++ N +
Sbjct: 187 TLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVV 246
Query: 242 PDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQI 301
PD ++VLSAC+ L LE G +IH + + GL + L+D Y KCG + A ++
Sbjct: 247 PDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKL 306
Query: 302 FFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMKK 338
F K+I W ++SG + A++LF M K
Sbjct: 307 FNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSK 343
Score = 121 bits (304), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 95/348 (27%), Positives = 164/348 (47%), Gaps = 26/348 (7%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNM-QVHGFRADNYTFPILLKA-AGKNCASR 67
MP + W+ ++ G E++++ ++ + + Y ++A +G + R
Sbjct: 105 MPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGR 164
Query: 68 -IGFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAY 126
+ F +K+GF R ++V T LI+ Y A +F+ +P K V W +M+
Sbjct: 165 WMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGC 224
Query: 127 ASNGEMEDAISLFHMMPLKDLSSFNILISGYSSCGEVLAARSIFD-----KMAIKDIVSW 181
G ++ LF+ + ++D N++ GY VL+A SI K I+ +
Sbjct: 225 VKMGRSYVSLQLFYQL-MED----NVVPDGYI-LSTVLSACSILPFLEGGKQIHAHILRY 278
Query: 182 ---------NSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLF 232
N ++ + + G + A LF MP KN ISW T+L+G Q EA++LF
Sbjct: 279 GLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELF 338
Query: 233 DEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKC 292
M PD +S+L++CA L +L G ++H Y I + L + +VT +L+DMYAKC
Sbjct: 339 TSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKC 398
Query: 293 GSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGY---AALKLFGYMK 337
+ A ++F D+ +NA+I G + G + AL +F M+
Sbjct: 399 DCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMR 446
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 151/324 (46%), Gaps = 12/324 (3%)
Query: 14 EVRRWNEIIKKHMLVGNA---EQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGF 70
+V +N +I+ + +G +A+ + +M+ R TF LL+A+ + +
Sbjct: 415 DVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSK 474
Query: 71 AFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNG 130
HG K G IF +ALI++Y +C D+ +F+ M VKDLV WNSM Y
Sbjct: 475 QIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQS 534
Query: 131 EMEDAISLFHMMPLK----DLSSFNILISGYSSCGEVLAARSIFDKMAIKDIVS----WN 182
E E+A++LF + L D +F +++ + V + ++ + + N
Sbjct: 535 ENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITN 594
Query: 183 SILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLP 242
++L + G E A F ++ + WN++++ G+ +A+ + ++M + P
Sbjct: 595 ALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEP 654
Query: 243 DYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIF 302
+Y+T VLSAC+H G +E G+K + G+ ++ + + G + +A ++
Sbjct: 655 NYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEHYVCMVSLLGRAGRLNKARELI 714
Query: 303 FKAQVKD-IYCWNAIISGLALHGH 325
K K W +++SG A G+
Sbjct: 715 EKMPTKPAAIVWRSLLSGCAKAGN 738
>AT3G14730.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4949385-4951346 REVERSE
Length = 653
Score = 161 bits (408), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 104/337 (30%), Positives = 172/337 (51%), Gaps = 16/337 (4%)
Query: 14 EVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFH 73
+V +N +I ++ G+ A+ TY M+ +G D YTFP LLK + S + H
Sbjct: 125 DVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMELSDVK-KVH 183
Query: 74 GQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKD-LVAWNSMLDAYASNGEM 132
G K GF +V + L+ Y DA K+F+ +P +D V WN++++ Y+
Sbjct: 184 GLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRF 243
Query: 133 EDAISLFHMMPLKDLS----SFNILISGYSSCGEVLAARSIFDKMAIK-----DIVSWNS 183
EDA+ +F M + + + ++S ++ G++ RSI +A+K DIV N+
Sbjct: 244 EDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIH-GLAVKTGSGSDIVVSNA 302
Query: 184 ILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPD 243
++ ++ +E+A ++F+ M ++ +WN++L G + LF+ M + PD
Sbjct: 303 LIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPD 362
Query: 244 YLTATSVLSACAHLGSLETGIKIHVYAIYSGL----ASSPHVTTALMDMYAKCGSIEQAL 299
+T T+VL C L SL G +IH Y I SGL +S+ + +LMDMY KCG + A
Sbjct: 363 IVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDAR 422
Query: 300 QIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYM 336
+F +VKD WN +I+G + G AL +F M
Sbjct: 423 MVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCM 459
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 149/328 (45%), Gaps = 16/328 (4%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTI 77
WN ++ + + E A+L + M+ G +T +L A + G + HG +
Sbjct: 230 WNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAV 289
Query: 78 KTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAIS 137
KTG I V ALI+MYG +A +FE M +DL WNS+L + G+ + ++
Sbjct: 290 KTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLA 349
Query: 138 LFHMMPLKDLS-SFNILISGYSSCGEVLA---ARSIFDKMAIKDIVSW--------NSIL 185
LF M + L + +CG + + R I M + +++ NS++
Sbjct: 350 LFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLM 409
Query: 186 SACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYL 245
+ GD+ A +F M +K++ SWN M+ G + A+D+F M PD +
Sbjct: 410 DMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEI 469
Query: 246 TATSVLSACAHLGSLETGIKI--HVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFF 303
T +L AC+H G L G + +Y+ L +S H ++DM + +E+A ++
Sbjct: 470 TFVGLLQACSHSGFLNEGRNFLAQMETVYNILPTSDHY-ACVIDMLGRADKLEEAYELAI 528
Query: 304 KAQVKD-IYCWNAIISGLALHGHGYAAL 330
+ D W +I+S LHG+ AL
Sbjct: 529 SKPICDNPVVWRSILSSCRLHGNKDLAL 556
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 133/288 (46%), Gaps = 14/288 (4%)
Query: 62 KNCASR----IGFAFHGQTIKTGFYRH-IFVQTALINMYGTLHCTADACKMFENMPVKDL 116
+ CA R G HG ++ GF T+L+NMY A +F +D+
Sbjct: 68 QRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGGSE-RDV 126
Query: 117 VAWNSMLDAYASNGEMEDAISLFHMMP----LKDLSSFNILISGYSS--CGEVLAARSIF 170
+N+++ + NG DA+ + M L D +F L+ G + +V +
Sbjct: 127 FGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMELSDVKKVHGLA 186
Query: 171 DKMAIK-DIVSWNSILSACTRAGDMEKAFALFQEMPMKN-TISWNTMLAGCLQRGQFSEA 228
K+ D + ++++ ++ +E A +F E+P ++ ++ WN ++ G Q +F +A
Sbjct: 187 FKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDA 246
Query: 229 VDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDM 288
+ +F +M+ T TSVLSA G ++ G IH A+ +G S V+ AL+DM
Sbjct: 247 LLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDM 306
Query: 289 YAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYM 336
Y K +E+A IF +D++ WN+++ G L LF M
Sbjct: 307 YGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERM 354
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 97/229 (42%), Gaps = 14/229 (6%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
M ++ WN ++ H G+ + + + M G R D T +L G+ + R G
Sbjct: 323 MDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQG 382
Query: 70 FAFHGQTIKTGFYR----HIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDA 125
HG I +G + F+ +L++MY DA +F++M VKD +WN M++
Sbjct: 383 REIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMING 442
Query: 126 YASNGEMEDAISLFHMM----PLKDLSSFNILISGYSSCGEVLAARSIFDKMAIKDIVSW 181
Y E A+ +F M D +F L+ S G + R+ +M +
Sbjct: 443 YGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQMETVYNILP 502
Query: 182 NSILSACT-----RAGDMEKAFALFQEMPM-KNTISWNTMLAGCLQRGQ 224
S AC RA +E+A+ L P+ N + W ++L+ C G
Sbjct: 503 TSDHYACVIDMLGRADKLEEAYELAISKPICDNPVVWRSILSSCRLHGN 551
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 61/116 (52%), Gaps = 9/116 (7%)
Query: 223 GQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSG-LASSPHV 281
GQ E ++ C+ + L CA +G +IH + + G L SP
Sbjct: 46 GQIEENPKRYEHHNVATCI-------ATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRA 98
Query: 282 TTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMK 337
T+L++MYAKCG + +A+ +F ++ +D++ +NA+ISG ++G A++ + M+
Sbjct: 99 GTSLVNMYAKCGLMRRAVLVFGGSE-RDVFGYNALISGFVVNGSPLDAMETYREMR 153
>AT4G04370.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:2134060-2136249 REVERSE
Length = 729
Score = 160 bits (406), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 107/336 (31%), Positives = 166/336 (49%), Gaps = 15/336 (4%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
M ++ WN +I + VGN + + M+ G R D TF L +G C +G
Sbjct: 205 MEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMG 264
Query: 70 FAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADAC--KMFENMPVKDLVAWNSMLDAYA 127
H Q +KTGF + ++TALI MY L C + ++ E +P KD+V W M+
Sbjct: 265 RMLHCQIVKTGFDVDMHLKTALITMY--LKCGKEEASYRVLETIPNKDVVCWTVMISGLM 322
Query: 128 SNGEMEDAISLFHMM--PLKDLSSFNILISGYSSCGEV----LAARS---IFDKMAIKDI 178
G E A+ +F M DLSS + S +SC ++ L A + D
Sbjct: 323 RLGRAEKALIVFSEMLQSGSDLSS-EAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDT 381
Query: 179 VSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMK-T 237
+ NS+++ + G ++K+ +F+ M ++ +SWN +++G Q +A+ LF+EMK
Sbjct: 382 PALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFK 441
Query: 238 TNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQ 297
T D T S+L AC+ G+L G IH I S + V TAL+DMY+KCG +E
Sbjct: 442 TVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEA 501
Query: 298 ALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLF 333
A + F KD+ W +I+G HG G AL+++
Sbjct: 502 AQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIY 537
Score = 152 bits (384), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 97/316 (30%), Positives = 151/316 (47%), Gaps = 11/316 (3%)
Query: 29 GNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTIKTGFYRHIFVQ 88
G+ +Q + T+ +M + D +TFP LLKA G + H Q + GF ++
Sbjct: 25 GDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYIS 84
Query: 89 TALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMPLKDLS 148
++L+N+Y A A K+FE M +D+V W +M+ Y+ G + +A SL + M + +
Sbjct: 85 SSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIK 144
Query: 149 SFNI-LISGYSSCGEVLAARSIFDKMAIK----DIVSWNSILS---ACTRAGDMEKAFAL 200
+ L+ S E+ + + D I DI NS+L+ C GD A L
Sbjct: 145 PGPVTLLEMLSGVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGD---AKDL 201
Query: 201 FQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSL 260
F +M ++ +SWNTM++G G SE + L M+ PD T + LS + L
Sbjct: 202 FDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDL 261
Query: 261 ETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGL 320
E G +H + +G H+ TAL+ MY KCG E + ++ KD+ CW +ISGL
Sbjct: 262 EMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGL 321
Query: 321 ALHGHGYAALKLFGYM 336
G AL +F M
Sbjct: 322 MRLGRAEKALIVFSEM 337
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/338 (26%), Positives = 159/338 (47%), Gaps = 15/338 (4%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
M +V W +I + G +A M+ G + T +L + +
Sbjct: 107 MRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEMLSGVLEITQLQ-- 164
Query: 70 FAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASN 129
H + GF I V +++N+Y DA +F+ M +D+V+WN+M+ YAS
Sbjct: 165 -CLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASV 223
Query: 130 GEMEDAISLFHMM------PLKDLSSFNILISGYSSC----GEVLAARSIFDKMAIKDIV 179
G M + + L + M P + ++ +SG + C G +L + + + D+
Sbjct: 224 GNMSEILKLLYRMRGDGLRPDQQTFGASLSVSG-TMCDLEMGRMLHCQIVKTGFDV-DMH 281
Query: 180 SWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTN 239
++++ + G E ++ + + +P K+ + W M++G ++ G+ +A+ +F EM +
Sbjct: 282 LKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSG 341
Query: 240 CLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQAL 299
SV+++CA LGS + G +H Y + G +L+ MYAKCG ++++L
Sbjct: 342 SDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSL 401
Query: 300 QIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMK 337
IF + +D+ WNAIISG A + AL LF MK
Sbjct: 402 VIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMK 439
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/361 (23%), Positives = 162/361 (44%), Gaps = 40/361 (11%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
+P+ +V W +I M +G AE+A++ + M G + ++ + + + +G
Sbjct: 306 IPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLG 365
Query: 70 FAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASN 129
+ HG ++ G+ +LI MY + +FE M +DLV+WN+++ YA N
Sbjct: 366 ASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQN 425
Query: 130 GEMEDAISLFHMMPLK---DLSSFNI--LISGYSSCGEVLAARSIFDKMAIKDIVSWNSI 184
++ A+ LF M K + SF + L+ SS G L + + I+ + S+
Sbjct: 426 VDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAG-ALPVGKLIHCIVIRSFIRPCSL 484
Query: 185 LSAC-----TRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTN 239
+ ++ G +E A F + K+ +SW ++AG G+ A++++ E +
Sbjct: 485 VDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSG 544
Query: 240 CLPDYLTATSVLSACAHLGSLETGIKIHVYAIYS-GLASSPHVTTALMDMYAKCGSIEQA 298
P+++ +VLS+C+H G ++ G+KI + G+ + ++D+ + IE A
Sbjct: 545 MEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDA 604
Query: 299 LQIF----------------------FKAQVKDIYCWNAI--ISGLALH----GHGYAAL 330
+ + K +V+DI C + I G A H GH +AA+
Sbjct: 605 FKFYKENFTRPSIDVLGIILDACRANGKTEVEDIICEDMIELKPGDAGHYVKLGHSFAAM 664
Query: 331 K 331
K
Sbjct: 665 K 665
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 60/112 (53%)
Query: 206 MKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIK 265
+ +T +N+ + G + + F M LPD T S+L ACA L L G+
Sbjct: 8 LNSTKYFNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLS 67
Query: 266 IHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAII 317
IH + +G +S +++++L+++YAK G + A ++F + + +D+ W A+I
Sbjct: 68 IHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMI 119
>AT5G13230.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:4222514-4224982 FORWARD
Length = 822
Score = 159 bits (402), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 107/332 (32%), Positives = 164/332 (49%), Gaps = 16/332 (4%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTI 77
W I+ ++ G E ++ M++ GF +NYTF LKA+ A HGQ +
Sbjct: 215 WAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQIL 274
Query: 78 KTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAIS 137
KT + V L+ +Y L +DA K+F MP D+V W+ M+ + NG +A+
Sbjct: 275 KTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVD 334
Query: 138 LFHMMP-----LKDLSSFNIL----ISGYSSCGEVLAARSI---FDKMAIKDIVSWNSIL 185
LF M + + +IL I S GE L + FD DI N+++
Sbjct: 335 LFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDL----DIYVSNALI 390
Query: 186 SACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYL 245
+ M+ A LF E+ KN +SWNT++ G G+ +A +F E +
Sbjct: 391 DVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEV 450
Query: 246 TATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKA 305
T +S L ACA L S++ G+++H AI + A V+ +L+DMYAKCG I+ A +F +
Sbjct: 451 TFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEM 510
Query: 306 QVKDIYCWNAIISGLALHGHGYAALKLFGYMK 337
+ D+ WNA+ISG + HG G AL++ MK
Sbjct: 511 ETIDVASWNALISGYSTHGLGRQALRILDIMK 542
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 138/304 (45%), Gaps = 8/304 (2%)
Query: 38 YVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTIKTGFYRHIFVQTALINMYGT 97
Y + G + + F LK + I H +K G+ + FV ALIN Y
Sbjct: 134 YSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSV 193
Query: 98 LHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMPLKDLS----SFNIL 153
A +FE + KD+V W ++ Y NG ED++ L M + +F+
Sbjct: 194 CGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTA 253
Query: 154 ISGYSSCGEVLAARSIFDKMA----IKDIVSWNSILSACTRAGDMEKAFALFQEMPMKNT 209
+ G A+ + ++ + D +L T+ GDM AF +F EMP +
Sbjct: 254 LKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDV 313
Query: 210 ISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVY 269
+ W+ M+A Q G +EAVDLF M+ +P+ T +S+L+ CA G ++H
Sbjct: 314 VPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGL 373
Query: 270 AIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAA 329
+ G +V+ AL+D+YAKC ++ A+++F + K+ WN +I G G G A
Sbjct: 374 VVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKA 433
Query: 330 LKLF 333
+F
Sbjct: 434 FSMF 437
Score = 107 bits (268), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 146/319 (45%), Gaps = 10/319 (3%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
MP +V W+ +I + G +AV ++ M+ + +T +L S +G
Sbjct: 308 MPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLG 367
Query: 70 FAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASN 129
HG +K GF I+V ALI++Y A K+F + K+ V+WN+++ Y +
Sbjct: 368 EQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENL 427
Query: 130 GEMEDAISLFHMMPLKDLSSFNILISGYSSCGEVLAARSI---FDKMAI-----KDIVSW 181
GE A S+F +S + S LA+ + +AI K +
Sbjct: 428 GEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVS 487
Query: 182 NSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCL 241
NS++ + GD++ A ++F EM + SWN +++G G +A+ + D MK +C
Sbjct: 488 NSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCK 547
Query: 242 PDYLTATSVLSACAHLGSLETGIKIHVYAIYS-GLASSPHVTTALMDMYAKCGSIEQALQ 300
P+ LT VLS C++ G ++ G + I G+ T ++ + + G +++A++
Sbjct: 548 PNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMK 607
Query: 301 IFFKAQVK-DIYCWNAIIS 318
+ + + W A++S
Sbjct: 608 LIEGIPYEPSVMIWRAMLS 626
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/270 (21%), Positives = 116/270 (42%), Gaps = 37/270 (13%)
Query: 105 CKMFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMPLKDLSSFNILISGYSSCGEVL 164
C + + DL A N +L+AY G +DA++LF MP ++ SF L GY+ C + +
Sbjct: 73 CDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYA-CQDPI 131
Query: 165 AARS-------------------IFDKMAIKDIVSW-----------------NSILSAC 188
S +F + +I W ++++A
Sbjct: 132 GLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAY 191
Query: 189 TRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTAT 248
+ G ++ A +F+ + K+ + W +++ ++ G F +++ L M+ +P+ T
Sbjct: 192 SVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFD 251
Query: 249 SVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVK 308
+ L A LG+ + +H + + P V L+ +Y + G + A ++F +
Sbjct: 252 TALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKN 311
Query: 309 DIYCWNAIISGLALHGHGYAALKLFGYMKK 338
D+ W+ +I+ +G A+ LF M++
Sbjct: 312 DVVPWSFMIARFCQNGFCNEAVDLFIRMRE 341
>AT1G03540.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:883782-885611 FORWARD
Length = 609
Score = 159 bits (402), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 93/330 (28%), Positives = 169/330 (51%), Gaps = 13/330 (3%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTI 77
W ++ ++ +A+ +V M G A+ +T +KA + R+G FHG I
Sbjct: 131 WTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVI 190
Query: 78 KTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAIS 137
GF + F+ + L +YG DA ++F+ MP D++ W ++L A++ N E+A+
Sbjct: 191 THGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALG 250
Query: 138 LFHMMP-----LKDLSSFNILISGYSSCGEVLAARSIFDKMAIK----DIVSWNSILSAC 188
LF+ M + D S+F +++ + + + I K+ ++V +S+L
Sbjct: 251 LFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMY 310
Query: 189 TRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTAT 248
+ G + +A +F M KN++SW+ +L G Q G+ +A+++F EM+ D
Sbjct: 311 GKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEE----KDLYCFG 366
Query: 249 SVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVK 308
+VL ACA L ++ G +IH + G + V +AL+D+Y K G I+ A +++ K ++
Sbjct: 367 TVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIR 426
Query: 309 DIYCWNAIISGLALHGHGYAALKLFGYMKK 338
++ WNA++S LA +G G A+ F M K
Sbjct: 427 NMITWNAMLSALAQNGRGEEAVSFFNDMVK 456
Score = 137 bits (344), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 154/315 (48%), Gaps = 7/315 (2%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAV-LTYVNMQVHGFRADNYTFPILLKAAGKNCASRI 68
MP +V W ++ E+A+ L Y + G D TF +L A G +
Sbjct: 224 MPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQ 283
Query: 69 GFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYAS 128
G HG+ I G ++ V+++L++MYG +A ++F M K+ V+W+++L Y
Sbjct: 284 GKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQ 343
Query: 129 NGEMEDAISLFHMMPLKDLSSFNILISGYSSCGEVLAARSIFDKMAIK----DIVSWNSI 184
NGE E AI +F M KDL F ++ + V + I + + +++ +++
Sbjct: 344 NGEHEKAIEIFREMEEKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESAL 403
Query: 185 LSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDY 244
+ ++G ++ A ++ +M ++N I+WN ML+ Q G+ EAV F++M PDY
Sbjct: 404 IDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDY 463
Query: 245 LTATSVLSACAHLGSLETGIKIHVYAIYS-GLASSPHVTTALMDMYAKCGSIEQALQIFF 303
++ ++L+AC H G ++ G V S G+ + ++D+ + G E+A +
Sbjct: 464 ISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLE 523
Query: 304 KAQVK-DIYCWNAII 317
+A+ + D W ++
Sbjct: 524 RAECRNDASLWGVLL 538
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 136/281 (48%), Gaps = 12/281 (4%)
Query: 69 GFAFHGQTIKTGFYRHIFVQTALINMYGTLH-CTADACKMFENMPVKDLVAWNSMLDAYA 127
G FH +K+G V +L+++Y L + ++F+ VKD ++W SM+ Y
Sbjct: 80 GIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYV 139
Query: 128 SNGEMEDAISLFHMMPLKDLSSFNILISGY----SSCGEVLAARSIFDKMAIKDIVSWNS 183
+ E A+ +F M L + +S S GEV R F + I WN
Sbjct: 140 TGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGR-CFHGVVITHGFEWNH 198
Query: 184 ILSACTR-----AGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEM-KT 237
+S+ + A +F EMP + I W +L+ + + EA+ LF M +
Sbjct: 199 FISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRG 258
Query: 238 TNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQ 297
+PD T +VL+AC +L L+ G +IH I +G+ S+ V ++L+DMY KCGS+ +
Sbjct: 259 KGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVRE 318
Query: 298 ALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMKK 338
A Q+F K+ W+A++ G +G A+++F M++
Sbjct: 319 ARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEE 359
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 106/212 (50%), Gaps = 14/212 (6%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTI 77
W+ ++ + G E+A+ + M+ D Y F +LKA A R+G HGQ +
Sbjct: 334 WSALLGGYCQNGEHEKAIEIFREME----EKDLYCFGTVLKACAGLAAVRLGKEIHGQYV 389
Query: 78 KTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAIS 137
+ G + ++ V++ALI++YG C A +++ M +++++ WN+ML A A NG E+A+S
Sbjct: 390 RRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVS 449
Query: 138 LFHMMPLK----DLSSFNILISGYSSCGEVLAARSIFDKMA----IKDIVS-WNSILSAC 188
F+ M K D SF +++ G V R+ F MA IK ++ ++
Sbjct: 450 FFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLL 509
Query: 189 TRAGDMEKAFALFQEMPMKNTIS-WNTMLAGC 219
RAG E+A L + +N S W +L C
Sbjct: 510 GRAGLFEEAENLLERAECRNDASLWGVLLGPC 541
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 54/112 (48%), Gaps = 1/112 (0%)
Query: 223 GQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVT 282
GQ +EA+ + + ++ S+L C + S GI+ H + + SGL + +V
Sbjct: 40 GQLTEAIRILNSTHSSEIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVG 99
Query: 283 TALMDMYAKCG-SIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLF 333
+L+ +Y K G + + ++F VKD W +++SG AL++F
Sbjct: 100 NSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVF 151
>AT4G16835.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:9473021-9474803 FORWARD
Length = 575
Score = 159 bits (401), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 83/234 (35%), Positives = 132/234 (56%), Gaps = 1/234 (0%)
Query: 104 ACKMFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMPLKDLSSFNILISGYSSCGEV 163
A F+ MP KD +WN+M+ YA GEME A LF+ M K+ S+N +ISGY CG++
Sbjct: 57 AQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMMEKNEVSWNAMISGYIECGDL 116
Query: 164 LAARSIFDKMAIKDIVSWNSILSACTRAGDMEKAFALFQEMPM-KNTISWNTMLAGCLQR 222
A F ++ +V+W ++++ +A +E A A+F++M + KN ++WN M++G ++
Sbjct: 117 EKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVEN 176
Query: 223 GQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVT 282
+ + + LF M P+ +S L C+ L +L+ G +IH S L +
Sbjct: 177 SRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTAL 236
Query: 283 TALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYM 336
T+L+ MY KCG + A ++F + KD+ WNA+ISG A HG+ AL LF M
Sbjct: 237 TSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREM 290
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 136/305 (44%), Gaps = 24/305 (7%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
MP + WN +I + G E+A + +M + N ++ AS
Sbjct: 64 MPFKDAASWNTMITGYARRGEMEKARELFYSMMEKNEVSWNAMISGYIECGDLEKASHF- 122
Query: 70 FAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPV-KDLVAWNSMLDAYAS 128
K R + TA+I Y A MF++M V K+LV WN+M+ Y
Sbjct: 123 -------FKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVE 175
Query: 129 NGEMEDAISLFHMMPLKDLSSFNILISGYSS----CGEVLAAR------SIFDKMAI-KD 177
N ED + LF M + + + SG SS C E+ A + I K + D
Sbjct: 176 NSRPEDGLKLFRAMLEEGIRPNS---SGLSSALLGCSELSALQLGRQIHQIVSKSTLCND 232
Query: 178 IVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKT 237
+ + S++S + G++ A+ LF+ M K+ ++WN M++G Q G +A+ LF EM
Sbjct: 233 VTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMID 292
Query: 238 TNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYS-GLASSPHVTTALMDMYAKCGSIE 296
PD++T +VL AC H G + G+ + + P T ++D+ + G +E
Sbjct: 293 NKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLE 352
Query: 297 QALQI 301
+AL++
Sbjct: 353 EALKL 357
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 95/197 (48%), Gaps = 10/197 (5%)
Query: 142 MPLKDLSSFNILISGYS-SCGEVLAARSIFDKMAIKDIVSWNSILSACTRAGDMEKAFAL 200
M K+ ++N L+ G S ++ A +FD++ D S+N +LS R + EKA +
Sbjct: 1 MRAKNTITWNSLLIGISKDPSRMMEAHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSF 60
Query: 201 FQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSL 260
F MP K+ SWNTM+ G +RG+ +A +LF M N ++ +++S G L
Sbjct: 61 FDRMPFKDAASWNTMITGYARRGEMEKARELFYSMMEKN----EVSWNAMISGYIECGDL 116
Query: 261 ETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQV-KDIYCWNAIISG 319
E A G+ + TA++ Y K +E A +F V K++ WNA+ISG
Sbjct: 117 EKASHFFKVAPVRGVVA----WTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISG 172
Query: 320 LALHGHGYAALKLFGYM 336
+ LKLF M
Sbjct: 173 YVENSRPEDGLKLFRAM 189
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 92/212 (43%), Gaps = 10/212 (4%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTI 77
WN +I ++ E + + M G R ++ L + A ++G H
Sbjct: 166 WNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVS 225
Query: 78 KTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAIS 137
K+ + T+LI+MY DA K+FE M KD+VAWN+M+ YA +G + A+
Sbjct: 226 KSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALC 285
Query: 138 LFHMMP----LKDLSSFNILISGYSSCGEVLAARSIFDKMAIKDIVS-----WNSILSAC 188
LF M D +F ++ + G V + F+ M V + ++
Sbjct: 286 LFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLL 345
Query: 189 TRAGDMEKAFALFQEMPMK-NTISWNTMLAGC 219
RAG +E+A L + MP + + + T+L C
Sbjct: 346 GRAGKLEEALKLIRSMPFRPHAAVFGTLLGAC 377
>AT1G62260.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:22997826-22999796 REVERSE
Length = 656
Score = 158 bits (399), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 108/348 (31%), Positives = 172/348 (49%), Gaps = 27/348 (7%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
MP W+ +I G + AV+ + M V + P+ AG R+
Sbjct: 162 MPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKD------SSPLCALVAGLIKNERLS 215
Query: 70 FA--FHGQ--TIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMP------------- 112
A GQ ++ +G ++ LI YG A +F+ +P
Sbjct: 216 EAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRE 275
Query: 113 --VKDLVAWNSMLDAYASNGEMEDAISLFHMMPLKDLSSFNILISGYSSCGEVLAARSIF 170
K++V+WNSM+ AY G++ A LF M +D S+N +I GY + A ++F
Sbjct: 276 RFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALF 335
Query: 171 DKMAIKDIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVD 230
+M +D SWN ++S G++E A F++ P K+T+SWN+++A + + EAVD
Sbjct: 336 SEMPNRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVD 395
Query: 231 LFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYA 290
LF M PD T TS+LSA L +L G+++H + + + P V AL+ MY+
Sbjct: 396 LFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVIPDVP-VHNALITMYS 454
Query: 291 KCGSIEQALQIFFKAQVK-DIYCWNAIISGLALHGHGYAALKLFGYMK 337
+CG I ++ +IF + ++K ++ WNA+I G A HG+ AL LFG MK
Sbjct: 455 RCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMK 502
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 126/263 (47%), Gaps = 38/263 (14%)
Query: 102 ADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMPLKDLSSFNILISGYSSCG 161
A+A +FE + ++ V WN+M+ Y EM A LF +MP +D+ ++N +ISGY SCG
Sbjct: 57 AEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVVTWNTMISGYVSCG 116
Query: 162 EVL---AARSIFDKMAIKDIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAG 218
+ AR +FD+M +D SWN+++S + + +A LF++MP +N +SW+ M+ G
Sbjct: 117 GIRFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSWSAMITG 176
Query: 219 CLQRGQFSEAVDLFDEMKTTNCLP-----DYLTATSVLSACA----HLGSLETGIKIHVY 269
Q G+ AV LF +M + P L LS A GSL +G + VY
Sbjct: 177 FCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVY 236
Query: 270 AIYSGLASSPHVTTALMDMYAKCGSIEQALQIF--------------FKAQV-KDIYCWN 314
A L+ Y + G +E A +F F+ + K++ WN
Sbjct: 237 AY-----------NTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWN 285
Query: 315 AIISGLALHGHGYAALKLFGYMK 337
++I G +A LF MK
Sbjct: 286 SMIKAYLKVGDVVSARLLFDQMK 308
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 134/307 (43%), Gaps = 65/307 (21%)
Query: 83 RHIFVQTALINMY---GTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAISLF 139
R + +I+ Y G + +A K+F+ MP +D +WN+M+ YA N + +A+ LF
Sbjct: 100 RDVVTWNTMISGYVSCGGIRFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLF 159
Query: 140 HMMPLKDLSSFNILISGYSSCGEVLAARSIFDKMAIKD---------------------- 177
MP ++ S++ +I+G+ GEV +A +F KM +KD
Sbjct: 160 EKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAW 219
Query: 178 ---------------IVSWNSILSACTRAGDMEKAFALFQEMP---------------MK 207
+ ++N+++ + G +E A LF ++P K
Sbjct: 220 VLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCK 279
Query: 208 NTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIH 267
N +SWN+M+ L+ G A LFD+MK D ++ +++ H+ +E
Sbjct: 280 NVVSWNSMIKAYLKVGDVVSARLLFDQMKDR----DTISWNTMIDGYVHVSRMEDA---- 331
Query: 268 VYAIYSGLAS-SPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHG 326
+A++S + + H ++ YA G++E A F K K WN+II+ +
Sbjct: 332 -FALFSEMPNRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDY 390
Query: 327 YAALKLF 333
A+ LF
Sbjct: 391 KEAVDLF 397
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 149/321 (46%), Gaps = 24/321 (7%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTI 77
WN +IK ++ VG+ A L + M+ D ++ ++ FA +
Sbjct: 284 WNSMIKAYLKVGDVVSARLLFDQMKDR----DTISWNTMIDGYVHVSRMEDAFALFSEMP 339
Query: 78 KTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAIS 137
R +++ Y ++ A FE P K V+WNS++ AY N + ++A+
Sbjct: 340 N----RDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVD 395
Query: 138 LFHMMPLK----DLSSFNILISGYSSCGEV-----LAARSIFDKMAIKDIVSWNSILSAC 188
LF M ++ D + L+S +S G V + I K I D+ N++++
Sbjct: 396 LFIRMNIEGEKPDPHTLTSLLS--ASTGLVNLRLGMQMHQIVVKTVIPDVPVHNALITMY 453
Query: 189 TRAGDMEKAFALFQEMPMKN-TISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTA 247
+R G++ ++ +F EM +K I+WN M+ G G SEA++LF MK+ P ++T
Sbjct: 454 SRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITF 513
Query: 248 TSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVT--TALMDMYAKCGSIEQALQIFFKA 305
SVL+ACAH G ++ K ++ S P + ++L+++ + G E+A+ I
Sbjct: 514 VSVLNACAHAGLVDEA-KAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSM 572
Query: 306 QVK-DIYCWNAIISGLALHGH 325
+ D W A++ ++ +
Sbjct: 573 PFEPDKTVWGALLDACRIYNN 593
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 107/227 (47%), Gaps = 21/227 (9%)
Query: 118 AWNSMLDAYASNGEMEDAISLFHMMPLKDLSSFNILISGYSSCGEVLAARSIFDKMAIKD 177
A N L+ +G + +A +F + ++ ++N +ISGY E+ AR +FD M +D
Sbjct: 42 ATNKELNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRD 101
Query: 178 IVSWNSILSACTRAGD---MEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDE 234
+V+WN+++S G +E+A LF EMP +++ SWNTM++G + + EA+ LF++
Sbjct: 102 VVTWNTMISGYVSCGGIRFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEK 161
Query: 235 MKTTNC------LPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTA--LM 286
M N + + V SA + + A+ +GL + ++ A ++
Sbjct: 162 MPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVL 221
Query: 287 DMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLF 333
Y S + L +Y +N +I G G AA LF
Sbjct: 222 GQYGSLVSGREDL----------VYAYNTLIVGYGQRGQVEAARCLF 258
>AT1G04840.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:1362867-1364962 REVERSE
Length = 665
Score = 158 bits (399), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 95/309 (30%), Positives = 155/309 (50%), Gaps = 35/309 (11%)
Query: 32 EQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTIKTGFYRHIFVQTAL 91
E +V ++ M G + D TFP +LK+ K +G A H T+K FV
Sbjct: 108 ESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRWLGRALHAATLKN------FVD--- 158
Query: 92 INMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMPLK----DL 147
C F + S++D YA G+++ A +F P + +
Sbjct: 159 -------------CDSFVRL---------SLVDMYAKTGQLKHAFQVFEESPDRIKKESI 196
Query: 148 SSFNILISGYSSCGEVLAARSIFDKMAIKDIVSWNSILSACTRAGDMEKAFALFQEMPMK 207
+N+LI+GY ++ A ++F M ++ SW++++ +G++ +A LF+ MP K
Sbjct: 197 LIWNVLINGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEK 256
Query: 208 NTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIH 267
N +SW T++ G Q G + A+ + EM P+ T +VLSAC+ G+L +GI+IH
Sbjct: 257 NVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIH 316
Query: 268 VYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGY 327
Y + +G+ + TAL+DMYAKCG ++ A +F KDI W A+I G A+HG +
Sbjct: 317 GYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFH 376
Query: 328 AALKLFGYM 336
A++ F M
Sbjct: 377 QAIQCFRQM 385
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 96/224 (42%), Gaps = 16/224 (7%)
Query: 9 FMPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRI 68
MP V W +I G+ E A+ TY M G + + YT +L A K+ A
Sbjct: 252 LMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGS 311
Query: 69 GFAFHGQTIKTGFYRHIFVQTALINMY---GTLHCTADACKMFENMPVKDLVAWNSMLDA 125
G HG + G + TAL++MY G L C A +F NM KD+++W +M+
Sbjct: 312 GIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDC---AATVFSNMNHKDILSWTAMIQG 368
Query: 126 YASNGEMEDAISLFHMM----PLKDLSSFNILISGYSSCGEVLAARSIFDKMAIKDIVS- 180
+A +G AI F M D F +++ + EV + FD M + +
Sbjct: 369 WAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEP 428
Query: 181 ----WNSILSACTRAGDMEKAFALFQEMPMK-NTISWNTMLAGC 219
+ ++ RAG + +A L + MP+ + +W + C
Sbjct: 429 TLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTTWAALYRAC 472
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 78/176 (44%), Gaps = 10/176 (5%)
Query: 167 RSIFDKMAIKDIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFS 226
R + +VS +S+L + + + ++F+ +N N ++ G + +F
Sbjct: 55 RGVLSSRVAAQLVSCSSLLKSP------DYSLSIFRNSEERNPFVLNALIRGLTENARFE 108
Query: 227 EAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALM 286
+V F M PD LT VL + + LG G +H + + + V +L+
Sbjct: 109 SSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRWLGRALHAATLKNFVDCDSFVRLSLV 168
Query: 287 DMYAKCGSIEQALQIFFKA----QVKDIYCWNAIISGLALHGHGYAALKLFGYMKK 338
DMYAK G ++ A Q+F ++ + + I WN +I+G + A LF M +
Sbjct: 169 DMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSMPE 224
>AT3G02330.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:473881-476592 REVERSE
Length = 861
Score = 157 bits (398), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 92/311 (29%), Positives = 154/311 (49%), Gaps = 39/311 (12%)
Query: 62 KNCASRIGFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNS 121
K A +G H I +GF FV L+ +Y A +F+ MP++D+V+WN
Sbjct: 18 KQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNK 77
Query: 122 MLDAYASNGEMEDAISLFHMMPLKDLSSFNILISGYSSCGEVLAARSIFDKMAIK----- 176
M++ Y+ + +M A S F+MMP++D+ S+N ++SGY GE L + +F M +
Sbjct: 78 MINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFD 137
Query: 177 ----------------------------------DIVSWNSILSACTRAGDMEKAFALFQ 202
D+V+ +++L + ++ +FQ
Sbjct: 138 GRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQ 197
Query: 203 EMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLET 262
+P KN++SW+ ++AGC+Q S A+ F EM+ N SVL +CA L L
Sbjct: 198 GIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRL 257
Query: 263 GIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLAL 322
G ++H +A+ S A+ V TA +DMYAKC +++ A +F ++ + +NA+I+G +
Sbjct: 258 GGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQ 317
Query: 323 HGHGYAALKLF 333
HG+ AL LF
Sbjct: 318 EEHGFKALLLF 328
Score = 131 bits (329), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 158/333 (47%), Gaps = 10/333 (3%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
MP +V WN ++ ++ G + +++ +V+M G D TF I+LK + +G
Sbjct: 98 MPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLG 157
Query: 70 FAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASN 129
HG ++ G + +AL++MY ++ ++F+ +P K+ V+W++++ N
Sbjct: 158 MQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQN 217
Query: 130 GEMEDAISLF-HMMPLKDLSSFNILISGYSSC--------GEVLAARSIFDKMAIKDIVS 180
+ A+ F M + S +I S SC G L A ++ A IV
Sbjct: 218 NLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVR 277
Query: 181 WNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNC 240
+ L + +M+ A LF N S+N M+ G Q +A+ LF + ++
Sbjct: 278 -TATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGL 336
Query: 241 LPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQ 300
D ++ + V ACA + L G++I+ AI S L+ V A +DMY KC ++ +A +
Sbjct: 337 GFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFR 396
Query: 301 IFFKAQVKDIYCWNAIISGLALHGHGYAALKLF 333
+F + + +D WNAII+ +G GY L LF
Sbjct: 397 VFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLF 429
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/364 (25%), Positives = 157/364 (43%), Gaps = 49/364 (13%)
Query: 11 PSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGF 70
+L + +N +I + + +A+L + + G D + + +A G
Sbjct: 301 ENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGL 360
Query: 71 AFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNG 130
+G IK+ + V A I+MYG A+A ++F+ M +D V+WN+++ A+ NG
Sbjct: 361 QIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNG 420
Query: 131 EMEDAISLF---------------------------------HMMPLKDLSSFNI----- 152
+ + + LF H +K + N
Sbjct: 421 KGYETLFLFVSMLRSRIEPDEFTFGSILKACTGGSLGYGMEIHSSIVKSGMASNSSVGCS 480
Query: 153 LISGYSSCGEVLAARSIFDKMAIKDIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISW 212
LI YS CG + A I + + VS G ME+ + + + +SW
Sbjct: 481 LIDMYSKCGMIEEAEKIHSRFFQRANVS-----------GTMEELEKMHNKRLQEMCVSW 529
Query: 213 NTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIY 272
N++++G + + Q +A LF M PD T +VL CA+L S G +IH I
Sbjct: 530 NSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIK 589
Query: 273 SGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKL 332
L S ++ + L+DMY+KCG + + +F K+ +D WNA+I G A HG G A++L
Sbjct: 590 KELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQL 649
Query: 333 FGYM 336
F M
Sbjct: 650 FERM 653
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 108/189 (57%)
Query: 150 FNILISGYSSCGEVLAARSIFDKMAIKDIVSWNSILSACTRAGDMEKAFALFQEMPMKNT 209
N L+ Y++ + ++A +FDKM ++D+VSWN +++ +++ DM KA + F MP+++
Sbjct: 44 LNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDV 103
Query: 210 ISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVY 269
+SWN+ML+G LQ G+ +++++F +M D T +L C+ L G++IH
Sbjct: 104 VSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGI 163
Query: 270 AIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAA 329
+ G + +AL+DMYAK ++L++F K+ W+AII+G + A
Sbjct: 164 VVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLA 223
Query: 330 LKLFGYMKK 338
LK F M+K
Sbjct: 224 LKFFKEMQK 232
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/307 (29%), Positives = 145/307 (47%), Gaps = 33/307 (10%)
Query: 62 KNCAS----RIGFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLV 117
++CA+ R+G H +K+ F V+TA ++MY DA +F+N +
Sbjct: 247 RSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQ 306
Query: 118 AWNSMLDAYASNGEMEDAISLFHMMPLKDLSSFNILISG-YSSCGEV--LAARSIFDKMA 174
++N+M+ Y+ A+ LFH + L I +SG + +C V L+ +A
Sbjct: 307 SYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLA 366
Query: 175 IK-----DIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAV 229
IK D+ N+ + + + +AF +F EM ++ +SWN ++A Q G+ E +
Sbjct: 367 IKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETL 426
Query: 230 DLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMY 289
LF M + PD T S+L AC GSL G++IH + SG+AS+ V +L+DMY
Sbjct: 427 FLFVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMY 485
Query: 290 AKCGSIEQALQI----FFKAQVKDI----------------YCWNAIISGLALHGHGYAA 329
+KCG IE+A +I F +A V WN+IISG + A
Sbjct: 486 SKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDA 545
Query: 330 LKLFGYM 336
LF M
Sbjct: 546 QMLFTRM 552
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 82/346 (23%), Positives = 152/346 (43%), Gaps = 38/346 (10%)
Query: 14 EVRR-----WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRI 68
E+RR WN II H G + + +V+M D +TF +LKA
Sbjct: 400 EMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTGGSLG-Y 458
Query: 69 GFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKM----------------FENMP 112
G H +K+G + V +LI+MY +A K+ E M
Sbjct: 459 GMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMH 518
Query: 113 VKDL----VAWNSMLDAYASNGEMEDAISLF-HMMPLKDLSSFNILISGYSSCGEVLAA- 166
K L V+WNS++ Y + EDA LF MM + + +C + +A
Sbjct: 519 NKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAG 578
Query: 167 ------RSIFDKMAIKDIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCL 220
+ K D+ ++++ ++ GD+ + +F++ ++ ++WN M+ G
Sbjct: 579 LGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYA 638
Query: 221 QRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPH 280
G+ EA+ LF+ M N P+++T S+L ACAH+G ++ G++ + Y + P
Sbjct: 639 HHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLE-YFYMMKRDYGLDPQ 697
Query: 281 VT--TALMDMYAKCGSIEQALQIFFKAQVK-DIYCWNAIISGLALH 323
+ + ++D+ K G +++AL++ + + D W ++ +H
Sbjct: 698 LPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIH 743
>AT3G03580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:860695-863343 REVERSE
Length = 882
Score = 157 bits (398), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 100/334 (29%), Positives = 166/334 (49%), Gaps = 9/334 (2%)
Query: 11 PSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGF 70
P+ V WN II+ G +A+ Y ++ D YTFP ++KA + +G
Sbjct: 67 PAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGD 126
Query: 71 AFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNG 130
+ Q + GF +FV AL++MY + A ++F+ MPV+DLV+WNS++ Y+S+G
Sbjct: 127 LVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHG 186
Query: 131 EMEDAISLFHMMP----LKDLSSFNILISGYSSCGEVLAARSI----FDKMAIKDIVSWN 182
E+A+ ++H + + D + + ++ + + V + + +V N
Sbjct: 187 YYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNN 246
Query: 183 SILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLP 242
+++ + A +F EM +++++S+NTM+ G L+ E+V +F E P
Sbjct: 247 GLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE-NLDQFKP 305
Query: 243 DYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIF 302
D LT +SVL AC HL L I+ Y + +G V L+D+YAKCG + A +F
Sbjct: 306 DLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVF 365
Query: 303 FKAQVKDIYCWNAIISGLALHGHGYAALKLFGYM 336
+ KD WN+IISG G A+KLF M
Sbjct: 366 NSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMM 399
Score = 137 bits (344), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 165/330 (50%), Gaps = 11/330 (3%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTI 77
+N +I ++ + E++V ++ + F+ D T +L+A G + + +
Sbjct: 276 YNTMICGYLKLEMVEESVRMFLE-NLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYML 334
Query: 78 KTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAIS 137
K GF V+ LI++Y A +F +M KD V+WNS++ Y +G++ +A+
Sbjct: 335 KAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMK 394
Query: 138 LFHMMPL----KDLSSFNILISGYSSC-----GEVLAARSIFDKMAIKDIVSWNSILSAC 188
LF MM + D ++ +LIS + G+ L + I + I D+ N+++
Sbjct: 395 LFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICI-DLSVSNALIDMY 453
Query: 189 TRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTAT 248
+ G++ + +F M +T++WNT+++ C++ G F+ + + +M+ + +PD T
Sbjct: 454 AKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFL 513
Query: 249 SVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVK 308
L CA L + G +IH + G S + AL++MY+KCG +E + ++F + +
Sbjct: 514 VTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRR 573
Query: 309 DIYCWNAIISGLALHGHGYAALKLFGYMKK 338
D+ W +I ++G G AL+ F M+K
Sbjct: 574 DVVTWTGMIYAYGMYGEGEKALETFADMEK 603
Score = 130 bits (326), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/367 (26%), Positives = 158/367 (43%), Gaps = 69/367 (18%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
MP ++ WN +I + G E+A+ Y ++ D++T +L A G + G
Sbjct: 167 MPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQG 226
Query: 70 FAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASN 129
HG +K+G + V L+ MY DA ++F+ M V+D V++N+M+ Y
Sbjct: 227 QGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKL 286
Query: 130 GEMEDAISLF-----HMMP--------------LKDLS-------------------SFN 151
+E+++ +F P L+DLS N
Sbjct: 287 EMVEESVRMFLENLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRN 346
Query: 152 ILISGYSSCGEVLAARSIFDKMAIKDIVSWNSILSACTRAGDMEKAFALFQEMPMKNTIS 211
ILI Y+ CG+++ AR +F+ M KD VSWNSI+S ++GD+ +A LF+ M + +
Sbjct: 347 ILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQA 406
Query: 212 WNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAI 271
D++T ++S L L+ G +H I
Sbjct: 407 -------------------------------DHITYLMLISVSTRLADLKFGKGLHSNGI 435
Query: 272 YSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALK 331
SG+ V+ AL+DMYAKCG + +L+IF D WN +IS G L+
Sbjct: 436 KSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQ 495
Query: 332 LFGYMKK 338
+ M+K
Sbjct: 496 VTTQMRK 502
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 126/256 (49%), Gaps = 9/256 (3%)
Query: 73 HGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENM-PVKDLVAWNSMLDAYASNGE 131
H I G F LI+ Y A + +F + P K++ WNS++ A++ NG
Sbjct: 27 HALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSKNGL 86
Query: 132 MEDAISLFHMMPLKDLS----SFNILISGYSSCGEV----LAARSIFDKMAIKDIVSWNS 183
+A+ + + +S +F +I + + L I D D+ N+
Sbjct: 87 FPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNA 146
Query: 184 ILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPD 243
++ +R G + +A +F EMP+++ +SWN++++G G + EA++++ E+K + +PD
Sbjct: 147 LVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPD 206
Query: 244 YLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFF 303
T +SVL A +L ++ G +H +A+ SG+ S V L+ MY K A ++F
Sbjct: 207 SFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFD 266
Query: 304 KAQVKDIYCWNAIISG 319
+ V+D +N +I G
Sbjct: 267 EMDVRDSVSYNTMICG 282
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 82/142 (57%), Gaps = 1/142 (0%)
Query: 197 AFALFQEM-PMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACA 255
+ ++F+ + P KN WN+++ + G F EA++ + +++ + PD T SV+ ACA
Sbjct: 58 SLSVFRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACA 117
Query: 256 HLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNA 315
L E G ++ + G S V AL+DMY++ G + +A Q+F + V+D+ WN+
Sbjct: 118 GLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNS 177
Query: 316 IISGLALHGHGYAALKLFGYMK 337
+ISG + HG+ AL+++ +K
Sbjct: 178 LISGYSSHGYYEEALEIYHELK 199
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 127/259 (49%), Gaps = 16/259 (6%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTI 77
WN II ++ G+ +A+ + M + +AD+ T+ +L+ + + + G H I
Sbjct: 376 WNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGI 435
Query: 78 KTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAIS 137
K+G + V ALI+MY D+ K+F +M D V WN+++ A G+ +
Sbjct: 436 KSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQ 495
Query: 138 LFHMMP----LKDLSSFNILISGYSSCGEVLAARSIFDKMAI--------KDIVSWNSIL 185
+ M + D+++F + + +S LAA+ + ++ ++ N+++
Sbjct: 496 VTTQMRKSEVVPDMATFLVTLPMCAS----LAAKRLGKEIHCCLLRFGYESELQIGNALI 551
Query: 186 SACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYL 245
++ G +E + +F+ M ++ ++W M+ G+ +A++ F +M+ + +PD +
Sbjct: 552 EMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSV 611
Query: 246 TATSVLSACAHLGSLETGI 264
+++ AC+H G ++ G+
Sbjct: 612 VFIAIIYACSHSGLVDEGL 630
>AT5G66520.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:26551879-26553741 FORWARD
Length = 620
Score = 157 bits (397), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 79/193 (40%), Positives = 116/193 (60%)
Query: 146 DLSSFNILISGYSSCGEVLAARSIFDKMAIKDIVSWNSILSACTRAGDMEKAFALFQEMP 205
D+ + N LI+ Y+ G A +FD++ D VSWNS++ +AG M+ A LF++M
Sbjct: 149 DVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMA 208
Query: 206 MKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIK 265
KN ISW TM++G +Q EA+ LF EM+ ++ PD ++ + LSACA LG+LE G
Sbjct: 209 EKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKW 268
Query: 266 IHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGH 325
IH Y + + + L+DMYAKCG +E+AL++F + K + W A+ISG A HGH
Sbjct: 269 IHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGH 328
Query: 326 GYAALKLFGYMKK 338
G A+ F M+K
Sbjct: 329 GREAISKFMEMQK 341
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/348 (25%), Positives = 154/348 (44%), Gaps = 43/348 (12%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTI 77
WN +I+ E+++L Y M + YTFP LLKA A H Q
Sbjct: 83 WNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQIT 142
Query: 78 KTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAIS 137
K G+ ++ +LIN Y A +F+ +P D V+WNS++ Y G+M+ A++
Sbjct: 143 KLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALT 202
Query: 138 LFHMMPLKDLSSFNILISGYSSCGEVLAARSIFDKMAIKDI----VSWNSILSAC----- 188
LF M K+ S+ +ISGY A +F +M D+ VS + LSAC
Sbjct: 203 LFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGA 262
Query: 189 ------------------------------TRAGDMEKAFALFQEMPMKNTISWNTMLAG 218
+ G+ME+A +F+ + K+ +W +++G
Sbjct: 263 LEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISG 322
Query: 219 CLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASS 278
G EA+ F EM+ P+ +T T+VL+AC++ G +E G K+ Y++
Sbjct: 323 YAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEG-KLIFYSMERDYNLK 381
Query: 279 PHVT--TALMDMYAKCGSIEQALQIFFKAQVK-DIYCWNAIISGLALH 323
P + ++D+ + G +++A + + +K + W A++ +H
Sbjct: 382 PTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIH 429
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 61/137 (44%)
Query: 200 LFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGS 259
+F +T WN M+ G + ++ L+ M ++ + T S+L AC++L +
Sbjct: 71 VFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSA 130
Query: 260 LETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISG 319
E +IH G + + +L++ YA G+ + A +F + D WN++I G
Sbjct: 131 FEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKG 190
Query: 320 LALHGHGYAALKLFGYM 336
G AL LF M
Sbjct: 191 YVKAGKMDIALTLFRKM 207
>AT5G46460.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18840305-18842398 FORWARD
Length = 697
Score = 157 bits (396), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 82/253 (32%), Positives = 136/253 (53%)
Query: 84 HIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMP 143
H+ + T +I Y + DA +F+ MPV+D+V+WNSM+ G+M A+ LF MP
Sbjct: 65 HVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMP 124
Query: 144 LKDLSSFNILISGYSSCGEVLAARSIFDKMAIKDIVSWNSILSACTRAGDMEKAFALFQE 203
+ + S+ +++G G+V A +F +M +KD +WNS++ + G ++ A LF++
Sbjct: 125 ERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQ 184
Query: 204 MPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETG 263
MP KN ISW TM+ G Q + EA+DLF M T V++ACA+ + G
Sbjct: 185 MPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMG 244
Query: 264 IKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALH 323
I++H I G +V+ +L+ YA C I + ++F + + + W A++SG +L+
Sbjct: 245 IQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLN 304
Query: 324 GHGYAALKLFGYM 336
AL +F M
Sbjct: 305 KKHEDALSIFSGM 317
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 160/329 (48%), Gaps = 19/329 (5%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
MP V W +I + +A+ + NM ++ + F ++ A A +G
Sbjct: 185 MPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMG 244
Query: 70 FAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASN 129
HG IK GF +V +LI Y D+ K+F+ + + W ++L Y+ N
Sbjct: 245 IQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLN 304
Query: 130 GEMEDAISLFH-MMPLKDLSSFNILISGYSSCGEV--LAARSIFDKMAIK-----DIVSW 181
+ EDA+S+F M+ L + + SG +SC + L +A+K D
Sbjct: 305 KKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVG 364
Query: 182 NSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCL 241
NS++ + +G++ A ++F ++ K+ +SWN+++ GC Q G+ A +F +M N
Sbjct: 365 NSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKE 424
Query: 242 PDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVT------TALMDMYAKCGSI 295
PD +T T +LSAC+H G LE G K+ Y + SG+ H+ T ++D+ +CG +
Sbjct: 425 PDEITFTGLLSACSHCGFLEKGRKL-FYYMSSGIN---HIDRKIQHYTCMVDILGRCGKL 480
Query: 296 EQALQIFFKAQVK-DIYCWNAIISGLALH 323
++A ++ + VK + W A++S +H
Sbjct: 481 KEAEELIERMVVKPNEMVWLALLSACRMH 509
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 130/296 (43%), Gaps = 45/296 (15%)
Query: 83 RHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMM 142
R + TA++N A ++F MPVKD AWNSM+ Y G+++DA+ LF M
Sbjct: 126 RSVVSWTAMVNGCFRSGKVDQAERLFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQM 185
Query: 143 PLKDLSSFNILISGYSSCGEVLAARSIFDKM----------------------------- 173
P K++ S+ +I G A +F M
Sbjct: 186 PGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGI 245
Query: 174 -----AIKDIVSWNSILSA--------CTRAGDMEKAFALFQEMPMKNTISWNTMLAGCL 220
IK + +SA C R GD K +F E + W +L+G
Sbjct: 246 QVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRK---VFDEKVHEQVAVWTALLSGYS 302
Query: 221 QRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPH 280
+ +A+ +F M + LP+ T S L++C+ LG+L+ G ++H A+ GL +
Sbjct: 303 LNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAF 362
Query: 281 VTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYM 336
V +L+ MY+ G++ A+ +F K K I WN+II G A HG G A +FG M
Sbjct: 363 VGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQM 418
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 98/206 (47%), Gaps = 39/206 (18%)
Query: 131 EMEDAISLFHMMPLKDLSSFNILISGYSSCGEVLAARSIFDKMAIKDIVSWNSILSACTR 190
+++A +F+ +P +S + +I+GY+ ++ A ++FD+M ++D+VSWNS++S C
Sbjct: 50 RIDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVE 109
Query: 191 AGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSV 250
GDM A LF EMP ++ +SW M+ GC + G+ +A LF +M + T+
Sbjct: 110 CGDMNTAVKLFDEMPERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVKD--------TAA 161
Query: 251 LSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDI 310
++ H Y + G ++ AL++F + K++
Sbjct: 162 WNSMVH-------------------------------GYLQFGKVDDALKLFKQMPGKNV 190
Query: 311 YCWNAIISGLALHGHGYAALKLFGYM 336
W +I GL + AL LF M
Sbjct: 191 ISWTTMICGLDQNERSGEALDLFKNM 216
>AT5G44230.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:17814336-17816309 FORWARD
Length = 657
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 90/308 (29%), Positives = 155/308 (50%), Gaps = 43/308 (13%)
Query: 72 FHGQTIKTGFYRHIFVQTALINMYGTLHCTAD--ACKMFENMPVKDLVAWNSMLDAYASN 129
HG ++ G + ++ T LI L D A ++ E + ++ W +++ YA
Sbjct: 68 IHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWTAVIRGYAIE 127
Query: 130 GEMEDAISLFHMM--------------------PLKDLS--------SF----------- 150
G+ ++AI+++ M +KDL+ +F
Sbjct: 128 GKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGFCFVYVG 187
Query: 151 NILISGYSSCGEVLAARSIFDKMAIKDIVSWNSILSACTRAGDMEKAFALFQEMPMKNTI 210
N +I Y C + AR +FD+M +D++SW +++A R G+ME A LF+ +P K+ +
Sbjct: 188 NTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTKDMV 247
Query: 211 SWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYA 270
+W M+ G Q + EA++ FD M+ + D +T +SACA LG+ + + A
Sbjct: 248 AWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQIA 307
Query: 271 IYSGLASSPHVT--TALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYA 328
SG + S HV +AL+DMY+KCG++E+A+ +F K+++ ++++I GLA HG
Sbjct: 308 QKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQE 367
Query: 329 ALKLFGYM 336
AL LF YM
Sbjct: 368 ALHLFHYM 375
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/353 (24%), Positives = 162/353 (45%), Gaps = 46/353 (13%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTI 77
W +I+ + + G ++A+ Y M+ ++TF LLKA G +G FH QT
Sbjct: 117 WTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTF 176
Query: 78 KTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAIS 137
+ + ++V +I+MY A K+F+ MP +D+++W ++ AYA G ME A
Sbjct: 177 RLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAE 236
Query: 138 LFHMMPLKDLSSFNILISGYSSCGEVLAARSIFDKMAIK----DIVSWNSILSAC----- 188
LF +P KD+ ++ +++G++ + A FD+M D V+ +SAC
Sbjct: 237 LFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGA 296
Query: 189 --------------------------------TRAGDMEKAFALFQEMPMKNTISWNTML 216
++ G++E+A +F M KN ++++M+
Sbjct: 297 SKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMI 356
Query: 217 AGCLQRGQFSEAVDLFDEMKT-TNCLPDYLTATSVLSACAHLGSLETGIKI--HVYAIYS 273
G G+ EA+ LF M T T P+ +T L AC+H G ++ G ++ +Y +
Sbjct: 357 LGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFG 416
Query: 274 GLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDI-YCWNAIISGLALHGH 325
+ H T ++D+ + G +++AL++ V+ W A++ +H +
Sbjct: 417 VQPTRDHY-TCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNN 468
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 104/256 (40%), Gaps = 48/256 (18%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAE------------------------------QAVLTYV 39
MP +V W E+I + VGN E Q L Y
Sbjct: 210 MPERDVISWTELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYF 269
Query: 40 N-MQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTIKTGF--YRHIFVQTALINMYG 96
+ M+ G RAD T + A + AS+ K+G+ H+ + +ALI+MY
Sbjct: 270 DRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYS 329
Query: 97 TLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMPLK-----DLSSFN 151
+A +F +M K++ ++SM+ A++G ++A+ LFH M + + +F
Sbjct: 330 KCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFV 389
Query: 152 ILISGYSSCGEVLAARSIFDKM-------AIKDIVSWNSILSACTRAGDMEKAFALFQEM 204
+ S G V R +FD M +D + ++ R G +++A L + M
Sbjct: 390 GALMACSHSGLVDQGRQVFDSMYQTFGVQPTRD--HYTCMVDLLGRTGRLQEALELIKTM 447
Query: 205 PMK-NTISWNTMLAGC 219
++ + W +L C
Sbjct: 448 SVEPHGGVWGALLGAC 463
>AT5G56310.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:22802322-22803914 FORWARD
Length = 530
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 77/188 (40%), Positives = 119/188 (63%), Gaps = 2/188 (1%)
Query: 153 LISGYSSCGEVLAARSIFDKMAIKDIVSWNSILSACTRAGDMEKAFALFQEMP--MKNTI 210
LI Y SCG + AR +FD+M +KD+ WN++L+ + G+M++A +L + MP ++N +
Sbjct: 157 LIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEV 216
Query: 211 SWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYA 270
SW +++G + G+ SEA+++F M N PD +T +VLSACA LGSLE G +I Y
Sbjct: 217 SWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYV 276
Query: 271 IYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAAL 330
+ G+ + + A++DMYAK G+I +AL +F +++ W II+GLA HGHG AL
Sbjct: 277 DHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEAL 336
Query: 331 KLFGYMKK 338
+F M K
Sbjct: 337 AMFNRMVK 344
Score = 138 bits (347), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 159/324 (49%), Gaps = 51/324 (15%)
Query: 47 RADNYTFPILLKAAGKNCASRIGFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACK 106
+ D +TFP +LK A + G HGQ + GF + V T LI MY + DA K
Sbjct: 113 KPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARK 172
Query: 107 MFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMP--LKDLSSFNILISGYSSCGEVL 164
MF+ M VKD+ WN++L Y GEM++A SL MMP +++ S+ +ISGY+ G
Sbjct: 173 MFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRAS 232
Query: 165 AARSIFDKMAIKDI----VSWNSILSAC-------------------------------- 188
A +F +M ++++ V+ ++LSAC
Sbjct: 233 EAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVI 292
Query: 189 ---TRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYL 245
++G++ KA +F+ + +N ++W T++AG G +EA+ +F+ M P+ +
Sbjct: 293 DMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDV 352
Query: 246 TATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVT--TALMDMYAKCGSIEQALQIF- 302
T ++LSAC+H+G ++ G ++ ++ S P++ ++D+ + G + +A ++
Sbjct: 353 TFIAILSACSHVGWVDLGKRL-FNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIK 411
Query: 303 ---FKAQVKDIYCWNAIISGLALH 323
FKA W ++++ +H
Sbjct: 412 SMPFKANAA---IWGSLLAASNVH 432
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 76/164 (46%), Gaps = 3/164 (1%)
Query: 176 KDIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCL---QRGQFSEAVDLF 232
+D ++ + AC+ AG + A+++F P NT NTM+ + S A+ ++
Sbjct: 45 RDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLHNTMIRALSLLDEPNAHSIAITVY 104
Query: 233 DEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKC 292
++ PD T VL + + G +IH + G SS HV T L+ MY C
Sbjct: 105 RKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSC 164
Query: 293 GSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYM 336
G + A ++F + VKD+ WNA+++G G A L M
Sbjct: 165 GGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMM 208
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 92/210 (43%), Gaps = 10/210 (4%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTI 77
W +I + G A +A+ + M + D T +L A + +G
Sbjct: 218 WTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVD 277
Query: 78 KTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAIS 137
G R + + A+I+MY A +FE + +++V W +++ A++G +A++
Sbjct: 278 HRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALA 337
Query: 138 LFHMMPLKDLS----SFNILISGYSSCGEVLAARSIFDKMAIK-----DIVSWNSILSAC 188
+F+ M + +F ++S S G V + +F+ M K +I + ++
Sbjct: 338 MFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLL 397
Query: 189 TRAGDMEKAFALFQEMPMK-NTISWNTMLA 217
RAG + +A + + MP K N W ++LA
Sbjct: 398 GRAGKLREADEVIKSMPFKANAAIWGSLLA 427
>AT4G21065.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: CRR28
(CHLORORESPIRATORY REDUCTION28); endonuclease
(TAIR:AT1G59720.1); Has 14270 Blast hits to 5372
proteins in 184 species: Archae - 1; Bacteria - 4;
Metazoa - 153; Fungi - 82; Plants - 13714; Viruses - 0;
Other Eukaryotes - 316 (source: NCBI BLink). |
chr4:11245976-11247763 FORWARD
Length = 595
Score = 154 bits (390), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 95/320 (29%), Positives = 168/320 (52%), Gaps = 14/320 (4%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGF-RADNYTFPILLKAAGKNCASRIGFAFHGQT 76
WN +I+ + +GN+ A Y M+V G D +T+P L+KA R+G H
Sbjct: 88 WNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVV 147
Query: 77 IKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAI 136
I++GF I+VQ +L+++Y A A K+F+ MP KDLVAWNS+++ +A NG+ E+A+
Sbjct: 148 IRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEAL 207
Query: 137 SLFHMMPLKDLSS--FNI--LISGYSSCGEVLAARSIFDKMA----IKDIVSWNSILSAC 188
+L+ M K + F I L+S + G + + + M +++ S N +L
Sbjct: 208 ALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLY 267
Query: 189 TRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTN-CLPDYLTA 247
R G +E+A LF EM KN++SW +++ G G EA++LF M++T LP +T
Sbjct: 268 ARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITF 327
Query: 248 TSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVT--TALMDMYAKCGSIEQALQIFFKA 305
+L AC+H G ++ G + + + P + ++D+ A+ G +++A +
Sbjct: 328 VGILYACSHCGMVKEGFE-YFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSM 386
Query: 306 QVK-DIYCWNAIISGLALHG 324
++ ++ W ++ +HG
Sbjct: 387 PMQPNVVIWRTLLGACTVHG 406
Score = 142 bits (357), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 76/229 (33%), Positives = 127/229 (55%), Gaps = 11/229 (4%)
Query: 119 WNSMLDAYASNGEMEDAISLFHMMPLK-----DLSSFNILISGYSSCGEVLAARSIFDKM 173
WN+++ YA G A SL+ M + D ++ LI ++ +V +I +
Sbjct: 88 WNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHS-V 146
Query: 174 AIKD-----IVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEA 228
I+ I NS+L GD+ A+ +F +MP K+ ++WN+++ G + G+ EA
Sbjct: 147 VIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEA 206
Query: 229 VDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDM 288
+ L+ EM + PD T S+LSACA +G+L G ++HVY I GL + H + L+D+
Sbjct: 207 LALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDL 266
Query: 289 YAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMK 337
YA+CG +E+A +F + K+ W ++I GLA++G G A++LF YM+
Sbjct: 267 YARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYME 315
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 101/225 (44%), Gaps = 11/225 (4%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
MP ++ WN +I G E+A+ Y M G + D +T LL A K A +G
Sbjct: 182 MPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLG 241
Query: 70 FAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASN 129
H IK G R++ L+++Y +A +F+ M K+ V+W S++ A N
Sbjct: 242 KRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVN 301
Query: 130 GEMEDAISLF-HMMPLKDLSSFNILISGY----SSCGEVLAARSIFDKMAIK-----DIV 179
G ++AI LF +M + L I G S CG V F +M + I
Sbjct: 302 GFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIE 361
Query: 180 SWNSILSACTRAGDMEKAFALFQEMPMK-NTISWNTMLAGCLQRG 223
+ ++ RAG ++KA+ + MPM+ N + W T+L C G
Sbjct: 362 HFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHG 406
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 69/135 (51%), Gaps = 2/135 (1%)
Query: 203 EMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCL-PDYLTATSVLSACAHLGSLE 261
E P+ N WNT++ G + G A L+ EM+ + + PD T ++ A + +
Sbjct: 80 EKPI-NVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVR 138
Query: 262 TGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLA 321
G IH I SG S +V +L+ +YA CG + A ++F K KD+ WN++I+G A
Sbjct: 139 LGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFA 198
Query: 322 LHGHGYAALKLFGYM 336
+G AL L+ M
Sbjct: 199 ENGKPEEALALYTEM 213
>AT3G01580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:223529-225454 REVERSE
Length = 641
Score = 154 bits (390), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 101/337 (29%), Positives = 170/337 (50%), Gaps = 10/337 (2%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
M + +WN ++K E+ + + +M + DN+T P+ LKA G+ G
Sbjct: 1 MTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELREVNYG 60
Query: 70 FAFHGQTIK-TGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYAS 128
HG K ++V ++LI MY +A +MF+ + D+V W+SM+ +
Sbjct: 61 EMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEK 120
Query: 129 NGEMEDAISLFHMMPL-KDLSSFNI-LISGYSSCGEVLAARS-------IFDKMAIKDIV 179
NG A+ F M + D++ + LI+ S+C ++ +R + + D+
Sbjct: 121 NGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLS 180
Query: 180 SWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTN 239
NS+L+ ++ ++A LF+ + K+ ISW+T++A +Q G +EA+ +F++M
Sbjct: 181 LVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDG 240
Query: 240 CLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQAL 299
P+ T VL ACA LE G K H AI GL + V+TAL+DMY KC S E+A
Sbjct: 241 TEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAY 300
Query: 300 QIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYM 336
+F + KD+ W A+ISG L+G + +++ F M
Sbjct: 301 AVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIM 337
Score = 137 bits (346), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 164/333 (49%), Gaps = 14/333 (4%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNM-QVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQT 76
W+ ++ G+ QAV + M D T L+ A K SR+G HG
Sbjct: 111 WSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFV 170
Query: 77 IKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAI 136
I+ GF + + +L+N Y +A +F+ + KD+++W++++ Y NG +A+
Sbjct: 171 IRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEAL 230
Query: 137 SLFHMMPLKDLSSFNI-----LISGYSSCGEVLAARSIFDKMAIK-----DIVSWNSILS 186
+F+ M + D + N+ ++ ++ ++ R + +AI+ ++ +++
Sbjct: 231 LVFNDM-MDDGTEPNVATVLCVLQACAAAHDLEQGRKTHE-LAIRKGLETEVKVSTALVD 288
Query: 187 ACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMK-TTNCLPDYL 245
+ E+A+A+F +P K+ +SW +++G G +++ F M N PD +
Sbjct: 289 MYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAI 348
Query: 246 TATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKA 305
VL +C+ LG LE H Y I G S+P + +L+++Y++CGS+ A ++F
Sbjct: 349 LMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGI 408
Query: 306 QVKDIYCWNAIISGLALHGHGYAALKLFGYMKK 338
+KD W ++I+G +HG G AL+ F +M K
Sbjct: 409 ALKDTVVWTSLITGYGIHGKGTKALETFNHMVK 441
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/329 (22%), Positives = 132/329 (40%), Gaps = 71/329 (21%)
Query: 14 EVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFH 73
+V W+ +I ++ G A +A+L + +M G + T +L+A G H
Sbjct: 209 DVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTH 268
Query: 74 GQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEME 133
I+ G + V TAL++MY +A +F +P KD+V+W +++ + NG
Sbjct: 269 ELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAH 328
Query: 134 DAISLFHMMPLKD---------------------------LSSFNI-------------L 153
+I F +M L++ S+ I L
Sbjct: 329 RSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASL 388
Query: 154 ISGYSSCGEVLAARSIFDKMAIKDIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWN 213
+ YS CG + A +F+ +A+KD V W S+++ G KA F M
Sbjct: 389 VELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHM--------- 439
Query: 214 TMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYS 273
+K++ P+ +T S+LSAC+H G + G++I +
Sbjct: 440 ---------------------VKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVND 478
Query: 274 -GLASSPHVTTALMDMYAKCGSIEQALQI 301
LA + L+D+ + G ++ A++I
Sbjct: 479 YRLAPNLEHYAVLVDLLGRVGDLDTAIEI 507
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD
Length = 705
Score = 154 bits (389), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 90/265 (33%), Positives = 132/265 (49%), Gaps = 31/265 (11%)
Query: 103 DACKMFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMPLKDLSSFNILISGYSSCGE 162
DACK++E +P KD +A SM+ G +++A +F M + + ++ +++GY
Sbjct: 159 DACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNR 218
Query: 163 VLAARSIFDKMAIKDIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQR 222
V AR IFD M K VSW S+L + G +E A LF+ MP+K I+ N M++G Q+
Sbjct: 219 VDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQK 278
Query: 223 GQFSEAVDLFDEMKTTN-------------------------------CLPDYLTATSVL 251
G+ ++A +FD MK N P + T S+L
Sbjct: 279 GEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISIL 338
Query: 252 SACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIY 311
S CA L SL G ++H + +V + LM MY KCG + ++ IF + KDI
Sbjct: 339 SVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDII 398
Query: 312 CWNAIISGLALHGHGYAALKLFGYM 336
WN+IISG A HG G ALK+F M
Sbjct: 399 MWNSIISGYASHGLGEEALKVFCEM 423
Score = 128 bits (321), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 131/237 (55%), Gaps = 10/237 (4%)
Query: 103 DACKMFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMPLKDLSSFNILISGYSSCGE 162
DA K+F+ MP +++++WN ++ Y NGE+++A +F +MP +++ S+ L+ GY G+
Sbjct: 66 DARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGK 125
Query: 163 VLAARSIFDKMAIKDIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQR 222
V A S+F KM K+ VSW +L + G ++ A L++ +P K+ I+ +M+ G +
Sbjct: 126 VDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKE 185
Query: 223 GQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVT 282
G+ EA ++FDEM + + T T++++ ++ KI + + V+
Sbjct: 186 GRVDEAREIFDEMSERSVI----TWTTMVTGYGQNNRVDDARKI-----FDVMPEKTEVS 236
Query: 283 -TALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMKK 338
T+++ Y + G IE A ++F VK + NA+ISGL G A ++F MK+
Sbjct: 237 WTSMLMGYVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKE 293
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 120/281 (42%), Gaps = 61/281 (21%)
Query: 2 PLLVCNCFMPSL-------EVRR------------WNEIIKKHMLVGNAEQAVLTYVNMQ 42
P++ CN + L + RR W +IK H G +A+ ++ MQ
Sbjct: 264 PVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQ 323
Query: 43 VHGFRADNYTFPILLKAAGKNCAS----RIGFAFHGQTIKTGFYRHIFVQTALINMYGTL 98
G R TFP L+ CAS G H Q ++ F ++V + L+ MY
Sbjct: 324 KQGVRP---TFPTLISILSV-CASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKC 379
Query: 99 HCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMPLKDLSSFNILISGYS 158
+ +F+ P KD++ WNS++ YAS+G E+A+ +F MPL SG +
Sbjct: 380 GELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPL----------SGST 429
Query: 159 SCGEVLAARSIFDKMAIKDIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAG 218
E V++ + LSAC+ AG +E+ +++ M + T
Sbjct: 430 KPNE----------------VTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYA 473
Query: 219 CL-----QRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSAC 254
C+ + G+F+EA+++ D M PD S+L AC
Sbjct: 474 CMVDMLGRAGRFNEAMEMIDSMTVE---PDAAVWGSLLGAC 511
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 127/317 (40%), Gaps = 75/317 (23%)
Query: 83 RHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAISL---- 138
R + T ++ YG + DA K+F+ MP K V+W SML Y NG +EDA L
Sbjct: 201 RSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVM 260
Query: 139 ---------------------------FHMMPLKDLSSFNILISGYSSCGEVLAARSIFD 171
F M ++ +S+ +I + G L A +F
Sbjct: 261 PVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFI 320
Query: 172 KMAIKDI----VSWNSILSACT-----------------------------------RAG 192
M + + + SILS C + G
Sbjct: 321 LMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCG 380
Query: 193 DMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCL-PDYLTATSVL 251
++ K+ +F P K+ I WN++++G G EA+ +F EM + P+ +T + L
Sbjct: 381 ELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATL 440
Query: 252 SACAHLGSLETGIKIH--VYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVK- 308
SAC++ G +E G+KI+ + +++ + H ++DM + G +A+++ V+
Sbjct: 441 SACSYAGMVEEGLKIYESMESVFGVKPITAHY-ACMVDMLGRAGRFNEAMEMIDSMTVEP 499
Query: 309 DIYCWNAIISGLALHGH 325
D W +++ H
Sbjct: 500 DAAVWGSLLGACRTHSQ 516
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 91/189 (48%), Gaps = 10/189 (5%)
Query: 151 NILISGYSSCGEVLAARSIFDKMAIKDIVSWNSILSACTRAGDMEKAFALFQEMPMKNTI 210
N+ I+ S G++ AR +FD K I SWNS+++ A LF EMP +N I
Sbjct: 21 NVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNII 80
Query: 211 SWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYA 270
SWN +++G ++ G+ EA +FD M N ++ T+++ H G ++ +
Sbjct: 81 SWNGLVSGYMKNGEIDEARKVFDLMPERNV----VSWTALVKGYVHNGKVDVA-----ES 131
Query: 271 IYSGLASSPHVT-TALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAA 329
++ + V+ T ++ + + G I+ A +++ KD ++I GL G A
Sbjct: 132 LFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEA 191
Query: 330 LKLFGYMKK 338
++F M +
Sbjct: 192 REIFDEMSE 200
>AT1G16480.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: shoot apex;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT4G13650.1). | chr1:5625843-5628656
REVERSE
Length = 937
Score = 154 bits (388), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 162/338 (47%), Gaps = 11/338 (3%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
M + WN I + G+ E++ + M+ ++ T LL G + G
Sbjct: 221 MSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWG 280
Query: 70 FAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASN 129
HG +K GF + V L+ MY + +A +F+ MP KDL++WNS++ ++ ++
Sbjct: 281 RGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVND 340
Query: 130 GEMEDAISLF-HMMPLKDLSSFNILISGYSSC--------GEVLAARSIFDKMAIKDIVS 180
G DA+ L M+ ++ S ++C G +L + + I+
Sbjct: 341 GRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIG 400
Query: 181 WNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNC 240
N+++S + G+M ++ + +MP ++ ++WN ++ G + +A+ F M+
Sbjct: 401 -NALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGV 459
Query: 241 LPDYLTATSVLSACAHLGSL-ETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQAL 299
+Y+T SVLSAC G L E G +H Y + +G S HV +L+ MYAKCG + +
Sbjct: 460 SSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQ 519
Query: 300 QIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMK 337
+F ++I WNA+++ A HGHG LKL M+
Sbjct: 520 DLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMR 557
Score = 137 bits (346), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 90/336 (26%), Positives = 162/336 (48%), Gaps = 8/336 (2%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
MP V W ++ + G E+ + Y M+ G + + +++ + G +G
Sbjct: 120 MPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLG 179
Query: 70 FAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASN 129
GQ +K+G + V+ +LI+M G++ A +F+ M +D ++WNS+ AYA N
Sbjct: 180 RQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQN 239
Query: 130 GEMEDAISLFHMMPL----KDLSSFNILISGYSSCGEVLAARSIFD---KMAIKDIVSW- 181
G +E++ +F +M + ++ + L+S R I KM +V
Sbjct: 240 GHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVC 299
Query: 182 NSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCL 241
N++L AG +A +F++MP K+ ISWN+++A + G+ +A+ L M ++
Sbjct: 300 NTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKS 359
Query: 242 PDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQI 301
+Y+T TS L+AC E G +H + SGL + + AL+ MY K G + ++ ++
Sbjct: 360 VNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRV 419
Query: 302 FFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMK 337
+ +D+ WNA+I G A AL F M+
Sbjct: 420 LLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMR 455
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 157/325 (48%), Gaps = 9/325 (2%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
MP+ ++ WN ++ + G + A+ +M G + TF L A G
Sbjct: 322 MPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKG 381
Query: 70 FAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASN 129
HG + +G + + + AL++MYG + +++ ++ MP +D+VAWN+++ YA +
Sbjct: 382 RILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAED 441
Query: 130 GEMEDAISLFHMMPLKDLSSFNI-LISGYSSC---GEVLAARSIFDKMAIK-----DIVS 180
+ + A++ F M ++ +SS I ++S S+C G++L + D
Sbjct: 442 EDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHV 501
Query: 181 WNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNC 240
NS+++ + GD+ + LF + +N I+WN MLA G E + L +M++
Sbjct: 502 KNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGV 561
Query: 241 LPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQ 300
D + + LSA A L LE G ++H A+ G + A DMY+KCG I + ++
Sbjct: 562 SLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVK 621
Query: 301 IFFKAQVKDIYCWNAIISGLALHGH 325
+ + + + WN +IS L HG+
Sbjct: 622 MLPPSVNRSLPSWNILISALGRHGY 646
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 162/337 (48%), Gaps = 15/337 (4%)
Query: 9 FMPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCAS-R 67
MP WN ++ + VG + + + M G + ++ L+ A G++ + R
Sbjct: 17 IMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFR 76
Query: 68 IGFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYA 127
G HG K+G ++V TA++++YG + + K+FE MP +++V+W S++ Y+
Sbjct: 77 EGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYS 136
Query: 128 SNGEMEDAISLFHMMPLKDL----SSFNILISGYSSCG---EVLAARSIFDKMAIKDIVS 180
GE E+ I ++ M + + +S +++I SSCG + R I ++ + S
Sbjct: 137 DKGEPEEVIDIYKGMRGEGVGCNENSMSLVI---SSCGLLKDESLGRQIIGQVVKSGLES 193
Query: 181 ----WNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMK 236
NS++S G+++ A +F +M ++TISWN++ A Q G E+ +F M+
Sbjct: 194 KLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMR 253
Query: 237 TTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIE 296
+ + T +++LS H+ + G IH + G S V L+ MYA G
Sbjct: 254 RFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSV 313
Query: 297 QALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLF 333
+A +F + KD+ WN++++ G AL L
Sbjct: 314 EANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLL 350
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 120/257 (46%), Gaps = 15/257 (5%)
Query: 94 MYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMPLKDL----SS 149
MY A +F+ MPV++ V+WN+M+ G + + F M DL SS
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMC--DLGIKPSS 58
Query: 150 FNILISGYSSCG-------EVLAARSIFDKMAI-KDIVSWNSILSACTRAGDMEKAFALF 201
F ++ S ++CG E + K + D+ +IL G + + +F
Sbjct: 59 F-VIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVF 117
Query: 202 QEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLE 261
+EMP +N +SW +++ G +G+ E +D++ M+ + + + V+S+C L
Sbjct: 118 EEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDES 177
Query: 262 TGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLA 321
G +I + SGL S V +L+ M G+++ A IF + +D WN+I + A
Sbjct: 178 LGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYA 237
Query: 322 LHGHGYAALKLFGYMKK 338
+GH + ++F M++
Sbjct: 238 QNGHIEESFRIFSLMRR 254
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 152/333 (45%), Gaps = 23/333 (6%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAA--GKNCASR 67
MP +V WN +I + + ++A+ + M+V G ++ T +L A + R
Sbjct: 423 MPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLER 482
Query: 68 IGFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYA 127
G H + GF V+ +LI MY + + +F + ++++ WN+ML A A
Sbjct: 483 -GKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANA 541
Query: 128 SNGEMEDAISLFHMMPLKDLSSFNILISGYS-SCGEVLAAR-SIFDK------MAIK--- 176
+G E+ + L M SF + + +S S G AA+ ++ ++ +A+K
Sbjct: 542 HHGHGEEVLKLVSKM-----RSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGF 596
Query: 177 --DIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDE 234
D +N+ ++ G++ + + ++ SWN +++ + G F E F E
Sbjct: 597 EHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHE 656
Query: 235 MKTTNCLPDYLTATSVLSACAHLGSLETGIKIH-VYAIYSGLASSPHVTTALMDMYAKCG 293
M P ++T S+L+AC+H G ++ G+ + + A GL + ++D+ + G
Sbjct: 657 MLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSG 716
Query: 294 SIEQALQIFFKAQVK-DIYCWNAIISGLALHGH 325
+ +A K +K + W ++++ +HG+
Sbjct: 717 RLAEAETFISKMPMKPNDLVWRSLLASCKIHGN 749
>AT3G26782.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED IN:
seed; EXPRESSED DURING: E expanded cotyledon stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT3G23330.1); Has 13812 Blast hits to 4961
proteins in 140 species: Archae - 0; Bacteria - 2;
Metazoa - 58; Fungi - 30; Plants - 13522; Viruses - 0;
Other Eukaryotes - 200 (source: NCBI BLink). |
chr3:9850594-9852682 FORWARD
Length = 659
Score = 154 bits (388), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 107/348 (30%), Positives = 174/348 (50%), Gaps = 19/348 (5%)
Query: 7 NCFMPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCAS 66
N ++ +V WN +I G++ +A+L + +M+ +FP +KA
Sbjct: 33 NRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDI 92
Query: 67 RIGFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAY 126
G H Q G+ IFV +ALI MY T DA K+F+ +P +++V+W SM+ Y
Sbjct: 93 FSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGY 152
Query: 127 ASNGEMEDAISLFHMMPLKD--------LSSFNILISGYSSCGEVLAA------RSIFDK 172
NG DA+SLF + + + L S L+S S+C V A S K
Sbjct: 153 DLNGNALDAVSLFKDLLVDENDDDDAMFLDSMG-LVSVISACSRVPAKGLTESIHSFVIK 211
Query: 173 MAIKDIVS-WNSILSACTRAGDMEKAFA--LFQEMPMKNTISWNTMLAGCLQRGQFSEAV 229
VS N++L A + G+ A A +F ++ K+ +S+N++++ Q G +EA
Sbjct: 212 RGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAF 271
Query: 230 DLFDEMKTTNCLP-DYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDM 288
++F + + + +T ++VL A +H G+L G IH I GL V T+++DM
Sbjct: 272 EVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDM 331
Query: 289 YAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYM 336
Y KCG +E A + F + + K++ W A+I+G +HGH AL+LF M
Sbjct: 332 YCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAM 379
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 84/338 (24%), Positives = 158/338 (46%), Gaps = 29/338 (8%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTF------PILLKAAGKN 63
+P + W +I+ + L GNA AV + ++ V D+ F ++ A +
Sbjct: 137 IPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRV 196
Query: 64 CASRIGFAFHGQTIKTGFYRHIFVQTALINMY--GTLHCTADACKMFENMPVKDLVAWNS 121
A + + H IK GF R + V L++ Y G A A K+F+ + KD V++NS
Sbjct: 197 PAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNS 256
Query: 122 MLDAYASNGEMEDAISLFHMMPLKDLSSFN-----ILISGYSSCGEVLAARSIFD---KM 173
++ YA +G +A +F + + +FN ++ S G + + I D +M
Sbjct: 257 IMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRM 316
Query: 174 AIKD-IVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLF 232
++D ++ SI+ + G +E A F M KN SW M+AG G ++A++LF
Sbjct: 317 GLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELF 376
Query: 233 DEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTAL------M 286
M + P+Y+T SVL+AC+H G+ + + ++ + V L +
Sbjct: 377 PAMIDSGVRPNYITFVSVLAACSH-----AGLHVEGWRWFNAMKGRFGVEPGLEHYGCMV 431
Query: 287 DMYAKCGSIEQALQIFFKAQVK-DIYCWNAIISGLALH 323
D+ + G +++A + + ++K D W+++++ +H
Sbjct: 432 DLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIH 469
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 111/240 (46%), Gaps = 16/240 (6%)
Query: 115 DLVAWNSMLDAYASNGEMEDAISLFHMMPLKDL----SSFNILISGYSSCGEVLAARSIF 170
D+ +WNS++ A +G+ +A+ F M L SSF I SS ++ + +
Sbjct: 40 DVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTH 99
Query: 171 DKMAI----KDIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFS 226
+ + DI ++++ + G +E A +F E+P +N +SW +M+ G G
Sbjct: 100 QQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNAL 159
Query: 227 EAVDLF-----DEMKTTNCL-PDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPH 280
+AV LF DE + + D + SV+SAC+ + + IH + I G
Sbjct: 160 DAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVS 219
Query: 281 VTTALMDMYAKCGS--IEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMKK 338
V L+D YAK G + A +IF + KD +N+I+S A G A ++F + K
Sbjct: 220 VGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVK 279
>AT4G14820.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:8507794-8510038 REVERSE
Length = 722
Score = 153 bits (387), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 93/344 (27%), Positives = 167/344 (48%), Gaps = 39/344 (11%)
Query: 34 AVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTIKTGFYRHIFVQTALIN 93
+L Y ++ G R D ++F +LKA K A G HG K FV+T ++
Sbjct: 95 TILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMD 154
Query: 94 MYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAISLF------HMMPLK-- 145
MY + A +F+ M +D+V WN+M++ Y G +++A LF ++MP +
Sbjct: 155 MYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMI 214
Query: 146 -------------------------------DLSSFNILISGYSSCGEVLAARSIFDKMA 174
D L++ Y+ G + AR F KM+
Sbjct: 215 LCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMS 274
Query: 175 IKDIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDE 234
++++ +++S ++ G ++ A +F + K+ + W TM++ ++ EA+ +F+E
Sbjct: 275 VRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEE 334
Query: 235 MKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGS 294
M + PD ++ SV+SACA+LG L+ +H +GL S + AL++MYAKCG
Sbjct: 335 MCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGG 394
Query: 295 IEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMKK 338
++ +F K +++ W+++I+ L++HG AL LF MK+
Sbjct: 395 LDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQ 438
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/362 (24%), Positives = 157/362 (43%), Gaps = 51/362 (14%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
M +V WN +I+++ G ++A + M+ D ++ A G+ R
Sbjct: 172 MSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYN 231
Query: 70 FAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASN 129
A + I+ + TAL+ MY C A + F M V++L +M+ Y+
Sbjct: 232 RAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKC 291
Query: 130 GEMEDAISLFHMMPLKDLSSFNILISGYSSCGEVLAARSIFDKM---AIK-DIVSWNSIL 185
G ++DA +F KDL + +IS Y A +F++M IK D+VS S++
Sbjct: 292 GRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVI 351
Query: 186 SACTRAGDMEKA-----------------------------------FALFQEMPMKNTI 210
SAC G ++KA +F++MP +N +
Sbjct: 352 SACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVV 411
Query: 211 SWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYA 270
SW++M+ G+ S+A+ LF MK N P+ +T VL C+H G +E G K
Sbjct: 412 SWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKK----- 466
Query: 271 IYSGLASSPHVTTAL------MDMYAKCGSIEQALQIFFKAQV-KDIYCWNAIISGLALH 323
I++ + ++T L +D++ + + +AL++ V ++ W +++S +H
Sbjct: 467 IFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIH 526
Query: 324 GH 325
G
Sbjct: 527 GE 528
>AT2G33680.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:14249608-14251791 FORWARD
Length = 727
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 97/342 (28%), Positives = 166/342 (48%), Gaps = 18/342 (5%)
Query: 9 FMPSLEVRRWNEIIKKHMLVGNAEQAVLTY---VNMQVHGFRADNYTFPILLKAAGKNCA 65
+MP W+ ++ + G E+A+ + + + G +D Y F +L +
Sbjct: 178 YMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSD-YVFTAVLSSLAATIY 236
Query: 66 SRIGFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDA 125
+G H TIK G + + AL+ MY +ACKMF++ ++ + W++M+
Sbjct: 237 VGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTG 296
Query: 126 YASNGEMEDAISLFHMMPLKDLSSFNILISGY-SSCGEVL------AARSIFDKMAI-KD 177
Y+ NGE +A+ LF M + I G ++C ++ S K+ +
Sbjct: 297 YSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERH 356
Query: 178 IVSWNSILSACTRAG---DMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDE 234
+ + +++ +AG D K F QE ++ W ++++G +Q EA+ L+
Sbjct: 357 LFATTALVDMYAKAGCLADARKGFDCLQE---RDVALWTSLISGYVQNSDNEEALILYRR 413
Query: 235 MKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGS 294
MKT +P+ T SVL AC+ L +LE G ++H + I G + +AL MY+KCGS
Sbjct: 414 MKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGS 473
Query: 295 IEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYM 336
+E +F + KD+ WNA+ISGL+ +G G AL+LF M
Sbjct: 474 LEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEM 515
Score = 135 bits (340), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 93/338 (27%), Positives = 161/338 (47%), Gaps = 15/338 (4%)
Query: 14 EVRRWNEIIKKHMLVGNAEQAVLT---YVNMQVHGFRADNYTFPILLKAAGKNCASRIGF 70
+V WN +I + G + + M+ + YT + KA +S +G
Sbjct: 79 DVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGR 138
Query: 71 AFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNG 130
H +K + I+V T+L+ MY D K+F MP ++ W++M+ YA+ G
Sbjct: 139 QAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRG 198
Query: 131 EMEDAISLFHM-MPLKDLSS-----FNILISGYSSCGEVLAARSIFDKMAIKD-----IV 179
+E+AI +F++ + K+ S F ++S ++ V R I + IK+ +
Sbjct: 199 RVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIH-CITIKNGLLGFVA 257
Query: 180 SWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTN 239
N++++ ++ + +A +F +N+I+W+ M+ G Q G+ EAV LF M +
Sbjct: 258 LSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAG 317
Query: 240 CLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQAL 299
P T VL+AC+ + LE G ++H + + G TTAL+DMYAK G + A
Sbjct: 318 IKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADAR 377
Query: 300 QIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMK 337
+ F Q +D+ W ++ISG + AL L+ MK
Sbjct: 378 KGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMK 415
Score = 132 bits (331), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 90/324 (27%), Positives = 147/324 (45%), Gaps = 24/324 (7%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTI 77
W+ ++ + G + +AV + M G + YT +L A C G H +
Sbjct: 290 WSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLL 349
Query: 78 KTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAIS 137
K GF RH+F TAL++MY C ADA K F+ + +D+ W S++ Y N + E+A+
Sbjct: 350 KLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALI 409
Query: 138 LFHMMP--------------LKDLSSFNILISGYSSCGEVLAARSIFDKMAIKDIVSWNS 183
L+ M LK SS L G G + K V S
Sbjct: 410 LYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTI-------KHGFGLEVPIGS 462
Query: 184 ILSAC-TRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLP 242
LS ++ G +E +F+ P K+ +SWN M++G GQ EA++LF+EM P
Sbjct: 463 ALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEP 522
Query: 243 DYLTATSVLSACAHLGSLETG-IKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQI 301
D +T +++SAC+H G +E G ++ + GL ++D+ ++ G +++A +
Sbjct: 523 DDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEF 582
Query: 302 FFKAQVKDIYC-WNAIISGLALHG 324
A + C W ++S HG
Sbjct: 583 IESANIDHGLCLWRILLSACKNHG 606
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 146/284 (51%), Gaps = 19/284 (6%)
Query: 69 GFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYAS 128
G A HGQ I+TG I L+N Y A A +F + KD+V+WNS++ Y+
Sbjct: 33 GRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQ 92
Query: 129 NGEMEDAISLFHMMPLKDLSSFNILISGYSSCGEVLA------------ARSIFDKM-AI 175
NG + + ++ M +++ + +IL + Y+ G A A ++ KM +
Sbjct: 93 NGGISSSYTV--MQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSF 150
Query: 176 KDIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFD-- 233
DI S++ +AG +E +F MP +NT +W+TM++G RG+ EA+ +F+
Sbjct: 151 GDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLF 210
Query: 234 -EMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKC 292
K DY+ T+VLS+ A + G +IH I +GL ++ AL+ MY+KC
Sbjct: 211 LREKEEGSDSDYVF-TAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKC 269
Query: 293 GSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYM 336
S+ +A ++F + ++ W+A+++G + +G A+KLF M
Sbjct: 270 ESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRM 313
>AT2G03880.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:1181560-1183452 FORWARD
Length = 630
Score = 152 bits (385), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 96/304 (31%), Positives = 157/304 (51%), Gaps = 9/304 (2%)
Query: 40 NMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTIKTGFYRHIFVQTALINMYGTLH 99
++Q HG AD+ T+ L+K N A G G +F+ LINMY +
Sbjct: 51 SLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFN 110
Query: 100 CTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMPLKDLSSFNILI--SGY 157
DA ++F+ MP +++++W +M+ AY+ + A+ L +M L+D N+ S
Sbjct: 111 LLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLM-LRDNVRPNVYTYSSVL 169
Query: 158 SSCGEVLAAR----SIFDKMAIKDIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWN 213
SC + R I + D+ ++++ + G+ E A ++F EM + I WN
Sbjct: 170 RSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWN 229
Query: 214 TMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYS 273
+++ G Q + A++LF MK + + T TSVL AC L LE G++ HV+ +
Sbjct: 230 SIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIV-- 287
Query: 274 GLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLF 333
+ AL+DMY KCGS+E AL++F + + +D+ W+ +ISGLA +G+ ALKLF
Sbjct: 288 KYDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLF 347
Query: 334 GYMK 337
MK
Sbjct: 348 ERMK 351
Score = 119 bits (297), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 149/316 (47%), Gaps = 11/316 (3%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
MP V W +I + ++A+ V M R + YT+ +L++ R+
Sbjct: 122 MPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVRM- 180
Query: 70 FAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASN 129
H IK G +FV++ALI+++ L DA +F+ M D + WNS++ +A N
Sbjct: 181 --LHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQN 238
Query: 130 GEMEDAISLFHMMPLKD-LSSFNILISGYSSC-GEVLAARSIFDKMAI----KDIVSWNS 183
+ A+ LF M ++ L S +C G L + + I +D++ N+
Sbjct: 239 SRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQDLILNNA 298
Query: 184 ILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPD 243
++ + G +E A +F +M ++ I+W+TM++G Q G EA+ LF+ MK++ P+
Sbjct: 299 LVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPN 358
Query: 244 YLTATSVLSACAHLGSLETG-IKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIF 302
Y+T VL AC+H G LE G G+ ++D+ K G ++ A+++
Sbjct: 359 YITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLL 418
Query: 303 FKAQVK-DIYCWNAII 317
+ + + D W ++
Sbjct: 419 NEMECEPDAVTWRTLL 434
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 75/145 (51%), Gaps = 3/145 (2%)
Query: 194 MEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSA 253
+ A LF +MP +N ISW TM++ + +A++L M N P+ T +SVL +
Sbjct: 112 LNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRS 171
Query: 254 CAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCW 313
C + + +H I GL S V +AL+D++AK G E AL +F + D W
Sbjct: 172 CNGMSDVRM---LHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVW 228
Query: 314 NAIISGLALHGHGYAALKLFGYMKK 338
N+II G A + AL+LF MK+
Sbjct: 229 NSIIGGFAQNSRSDVALELFKRMKR 253
>AT1G19720.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:6819926-6822610 REVERSE
Length = 894
Score = 152 bits (383), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 103/343 (30%), Positives = 171/343 (49%), Gaps = 33/343 (9%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTI 77
WN +I + +G + A+ M+ G AD +T+ ++ N G + +
Sbjct: 285 WNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHN-----GMRYQALDM 339
Query: 78 KTGFYRHIFVQTALINMYGTLHCTADACKMFE---------NMPVK-----DLVAWNSML 123
+R +F+ + N T+ AC + ++ VK D++ NS++
Sbjct: 340 ----FRKMFLAGVVPNAV-TIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLV 394
Query: 124 DAYASNGEMEDAISLFHMMPLKDLSSFNILISGYSSCGEVLAARSIFDKMA----IKDIV 179
D Y+ G++EDA +F + KD+ ++N +I+GY G A +F +M +I+
Sbjct: 395 DMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNII 454
Query: 180 SWNSILSACTRAGDMEKAFALFQEMP-----MKNTISWNTMLAGCLQRGQFSEAVDLFDE 234
+WN+++S + GD +A LFQ M +NT +WN ++AG +Q G+ EA++LF +
Sbjct: 455 TWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRK 514
Query: 235 MKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGS 294
M+ + +P+ +T S+L ACA+L + +IH + L + V AL D YAK G
Sbjct: 515 MQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGD 574
Query: 295 IEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMK 337
IE + IF + KDI WN++I G LHG AL LF MK
Sbjct: 575 IEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMK 617
Score = 142 bits (359), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 93/326 (28%), Positives = 150/326 (46%), Gaps = 46/326 (14%)
Query: 17 RWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCAS-RIGFAFHGQ 75
RW E+ K L M G D++ FP +L+ NC G H
Sbjct: 161 RWREVAKLFRL-------------MMKDGVLPDDFLFPKILQGCA-NCGDVEAGKVIHSV 206
Query: 76 TIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDA 135
IK G + V +++ +Y A K F M +D++AWNS+L AY NG+ E+A
Sbjct: 207 VIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEA 266
Query: 136 ISLFHMMPLKDLS----SFNILISGYSSCGEVLAARSIFDKMAIKDIVSWNSILSACTRA 191
+ L M + +S ++NILI GY+ G+ AA + KM I +
Sbjct: 267 VELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITA----------- 315
Query: 192 GDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVL 251
+ +W M++G + G +A+D+F +M +P+ +T S +
Sbjct: 316 ----------------DVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAV 359
Query: 252 SACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIY 311
SAC+ L + G ++H A+ G V +L+DMY+KCG +E A ++F + KD+Y
Sbjct: 360 SACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVY 419
Query: 312 CWNAIISGLALHGHGYAALKLFGYMK 337
WN++I+G G+ A +LF M+
Sbjct: 420 TWNSMITGYCQAGYCGKAYELFTRMQ 445
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 76/338 (22%), Positives = 148/338 (43%), Gaps = 83/338 (24%)
Query: 69 GFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKD------------- 115
G H +K GF + V +L++MY DA K+F+++ KD
Sbjct: 371 GSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQ 430
Query: 116 ----------------------LVAWNSMLDAYASNGEMEDAISLFHMMP-----LKDLS 148
++ WN+M+ Y NG+ +A+ LF M ++ +
Sbjct: 431 AGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTA 490
Query: 149 SFNILISGYSSCGEVLAARSIFDKMA----IKDIVSWNSILSACT--------------- 189
++N++I+GY G+ A +F KM + + V+ S+L AC
Sbjct: 491 TWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCV 550
Query: 190 --------------------RAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAV 229
++GD+E + +F M K+ I+WN+++ G + G + A+
Sbjct: 551 LRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPAL 610
Query: 230 DLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVT--TALMD 287
LF++MKT P+ T +S++ A +G+++ G K+ Y+I + P + +A++
Sbjct: 611 ALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKV-FYSIANDYHIIPALEHCSAMVY 669
Query: 288 MYAKCGSIEQALQIFFKAQVK-DIYCWNAIISGLALHG 324
+Y + +E+ALQ + ++ + W + ++G +HG
Sbjct: 670 LYGRANRLEEALQFIQEMNIQSETPIWESFLTGCRIHG 707
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 88/184 (47%), Gaps = 2/184 (1%)
Query: 155 SGYSSCGEVLAARSIFDKMAIKDIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNT 214
SG G +L AR F D+ +LS + G + A +F M +N +W+
Sbjct: 94 SGSIHLGRILHAR--FGLFTEPDVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSA 151
Query: 215 MLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSG 274
M+ + ++ E LF M LPD +L CA+ G +E G IH I G
Sbjct: 152 MIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLG 211
Query: 275 LASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFG 334
++S V+ +++ +YAKCG ++ A + F + + +D+ WN+++ +G A++L
Sbjct: 212 MSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVK 271
Query: 335 YMKK 338
M+K
Sbjct: 272 EMEK 275
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 111/252 (44%), Gaps = 12/252 (4%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTI 77
WN II ++ G ++A+ + MQ F ++ T LL A +++ HG +
Sbjct: 492 WNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVL 551
Query: 78 KTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAIS 137
+ V+ AL + Y + +F M KD++ WNS++ Y +G A++
Sbjct: 552 RRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALA 611
Query: 138 LFHMMPLKDLS----SFNILISGYSSCGEVLAARSIFDKMA-----IKDIVSWNSILSAC 188
LF+ M + ++ + + +I + G V + +F +A I + ++++
Sbjct: 612 LFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLY 671
Query: 189 TRAGDMEKAFALFQEMPMKN-TISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTA 247
RA +E+A QEM +++ T W + L GC G A+ + + + P+
Sbjct: 672 GRANRLEEALQFIQEMNIQSETPIWESFLTGCRIHGDIDMAIHAAENLFSLE--PENTAT 729
Query: 248 TSVLSACAHLGS 259
S++S LG+
Sbjct: 730 ESIVSQIYALGA 741
>AT3G11460.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:3608250-3610121 FORWARD
Length = 623
Score = 152 bits (383), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 97/332 (29%), Positives = 161/332 (48%), Gaps = 12/332 (3%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTI 77
WN +++ +++ Y +M G D ++FP +LK+ G H
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 78 KTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDL--VAWNSMLDAYASNGEMEDA 135
K G FV TALI+MY ADA K+FE P V +N+++ Y +N ++ DA
Sbjct: 81 KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDA 140
Query: 136 ISLFHMMPLKDLSSFNILISG---------YSSCGEVLAARSIFDKMAIKDIVSWNSILS 186
+F M +S ++ + G Y G L + + + ++ NS ++
Sbjct: 141 AYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLD-SEVAVLNSFIT 199
Query: 187 ACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLT 246
+ G +E LF EMP+K I+WN +++G Q G + ++L+++MK++ PD T
Sbjct: 200 MYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFT 259
Query: 247 ATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQ 306
SVLS+CAHLG+ + G ++ +G + V+ A + MYA+CG++ +A +F
Sbjct: 260 LVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMP 319
Query: 307 VKDIYCWNAIISGLALHGHGYAALKLFGYMKK 338
VK + W A+I +HG G L LF M K
Sbjct: 320 VKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIK 351
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 139/317 (43%), Gaps = 12/317 (3%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTI 77
+N +I + A + M+ G D+ T L+ +G + HGQ +
Sbjct: 124 YNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCV 183
Query: 78 KTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAIS 137
K G + V + I MY ++F+ MPVK L+ WN+++ Y+ NG D +
Sbjct: 184 KGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLE 243
Query: 138 LFHMMPLKDLSSFNI-LISGYSSCGEVLAARSIFDKMA--------IKDIVSWNSILSAC 188
L+ M + L+S SSC L A+ I ++ + ++ N+ +S
Sbjct: 244 LYEQMKSSGVCPDPFTLVSVLSSCAH-LGAKKIGHEVGKLVESNGFVPNVFVSNASISMY 302
Query: 189 TRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTAT 248
R G++ KA A+F MP+K+ +SW M+ G + LFD+M PD
Sbjct: 303 ARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFV 362
Query: 249 SVLSACAHLGSLETGIKI-HVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQV 307
VLSAC+H G + G+++ L P + L+D+ + G +++A++ V
Sbjct: 363 MVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPV 422
Query: 308 K-DIYCWNAIISGLALH 323
+ D W A++ +H
Sbjct: 423 EPDGAVWGALLGACKIH 439
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 96/220 (43%), Gaps = 10/220 (4%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
MP + WN +I + G A + Y M+ G D +T +L + A +IG
Sbjct: 217 MPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIG 276
Query: 70 FAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASN 129
GF ++FV A I+MY A A +F+ MPVK LV+W +M+ Y +
Sbjct: 277 HEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMH 336
Query: 130 GEMEDAISLFHMMPLK----DLSSFNILISGYSSCGEVLAARSIFDKMAIKDIVS----- 180
G E + LF M + D + F +++S S G +F M + +
Sbjct: 337 GMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEH 396
Query: 181 WNSILSACTRAGDMEKAFALFQEMPMK-NTISWNTMLAGC 219
++ ++ RAG +++A + MP++ + W +L C
Sbjct: 397 YSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGAC 436
>AT2G37310.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15665102-15667075 REVERSE
Length = 657
Score = 152 bits (383), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 93/305 (30%), Positives = 154/305 (50%), Gaps = 40/305 (13%)
Query: 73 HGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEM 132
HG I+ GF +FV +I Y A K+F+ M +D+V+WNSM+ Y+ +G
Sbjct: 155 HGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSF 214
Query: 133 ED--------------------AISLF---------------HMMPLK-----DLSSFNI 152
ED IS+F H ++ DLS N
Sbjct: 215 EDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNA 274
Query: 153 LISGYSSCGEVLAARSIFDKMAIKDIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISW 212
+I Y+ CG + AR++FD+M+ KD V++ +I+S G +++A ALF EM +W
Sbjct: 275 VIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTW 334
Query: 213 NTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIY 272
N M++G +Q E ++ F EM P+ +T +S+L + + +L+ G +IH +AI
Sbjct: 335 NAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIR 394
Query: 273 SGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKL 332
+G ++ +VTT+++D YAK G + A ++F + + + W AII+ A+HG +A L
Sbjct: 395 NGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSL 454
Query: 333 FGYMK 337
F M+
Sbjct: 455 FDQMQ 459
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 125/274 (45%), Gaps = 26/274 (9%)
Query: 86 FVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAISLF------ 139
F+ + LI+ Y A +F+ + V++ ++N++L AY S DA SLF
Sbjct: 58 FLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSREMYFDAFSLFLSWIGS 117
Query: 140 ----HMMPLKDLSSFNILISGYSSCGEV-----------LAARSIFDKMAIKDIVSWNSI 184
D S + ++ S C + R FD D+ N +
Sbjct: 118 SCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGGFDS----DVFVGNGM 173
Query: 185 LSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEM-KTTNCLPD 243
++ T+ ++E A +F EM ++ +SWN+M++G Q G F + ++ M ++ P+
Sbjct: 174 ITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPN 233
Query: 244 YLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFF 303
+T SV AC L G+++H I + + + A++ YAKCGS++ A +F
Sbjct: 234 GVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFD 293
Query: 304 KAQVKDIYCWNAIISGLALHGHGYAALKLFGYMK 337
+ KD + AIISG HG A+ LF M+
Sbjct: 294 EMSEKDSVTYGAIISGYMAHGLVKEAMALFSEME 327
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 112/245 (45%), Gaps = 17/245 (6%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
M S+ + WN +I M + E+ + ++ M G R + T LL + + + G
Sbjct: 326 MESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGG 385
Query: 70 FAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASN 129
H I+ G +I+V T++I+ Y L A ++F+N + L+AW +++ AYA +
Sbjct: 386 KEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVH 445
Query: 130 GEMEDAISLFHMMPL----KDLSSFNILISGYSSCGEVLAARSIFDKMAIK-----DIVS 180
G+ + A SLF M D + ++S ++ G+ A+ IFD M K +
Sbjct: 446 GDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEH 505
Query: 181 WNSILSACTRAGDMEKAFALFQEMPMKNTIS-WNTMLAGC-----LQRGQFSEAVDLFDE 234
+ ++S +RAG + A +MP+ W +L G L+ +F A D E
Sbjct: 506 YACMVSVLSRAGKLSDAMEFISKMPIDPIAKVWGALLNGASVLGDLEIARF--ACDRLFE 563
Query: 235 MKTTN 239
M+ N
Sbjct: 564 MEPEN 568
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 78/359 (21%), Positives = 150/359 (41%), Gaps = 46/359 (12%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNM-QVHGFRADNYTFPILLKAAGKNCASRI 68
M +V WN +I + G+ E Y M F+ + T + +A G++
Sbjct: 193 MSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIF 252
Query: 69 GFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYAS 128
G H + I+ + + A+I Y A +F+ M KD V + +++ Y +
Sbjct: 253 GLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMA 312
Query: 129 NGEMEDAISLFHMMPLKDLSSFNILISGYSSCGEVLAARSIFDKM----AIKDIVSWNSI 184
+G +++A++LF M LS++N +ISG + F +M + + V+ +S+
Sbjct: 313 HGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSL 372
Query: 185 LSACT-----RAGDMEKAFAL------------------------------FQEMPMKNT 209
L + T + G AFA+ F ++
Sbjct: 373 LPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSL 432
Query: 210 ISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVY 269
I+W ++ G A LFD+M+ PD +T T+VLSA AH G ++ + H++
Sbjct: 433 IAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSG--DSDMAQHIF 490
Query: 270 -AIYSGLASSPHVT--TALMDMYAKCGSIEQALQIFFKAQVKDI-YCWNAIISGLALHG 324
++ + P V ++ + ++ G + A++ K + I W A+++G ++ G
Sbjct: 491 DSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKMPIDPIAKVWGALLNGASVLG 549
>AT1G33350.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:12090071-12091687 REVERSE
Length = 538
Score = 151 bits (382), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 76/188 (40%), Positives = 114/188 (60%), Gaps = 1/188 (0%)
Query: 152 ILISGYSSCGEVLAARSIFDKMAIKDIVSWNSILSACTRAGDMEKAFALFQEMPMKNTIS 211
+L S SS + AR +FD+M+ +++VSW ++LS R+GD+ A ALF++MP ++ S
Sbjct: 167 LLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPS 226
Query: 212 WNTMLAGCLQRGQFSEAVDLFDEM-KTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYA 270
WN +LA C Q G F EAV LF M + P+ +T VLSACA G+L+ IH +A
Sbjct: 227 WNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFA 286
Query: 271 IYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAAL 330
L+S V+ +L+D+Y KCG++E+A +F A K + WN++I+ ALHG A+
Sbjct: 287 YRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAI 346
Query: 331 KLFGYMKK 338
+F M K
Sbjct: 347 AVFEEMMK 354
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 162/327 (49%), Gaps = 50/327 (15%)
Query: 47 RADNYTFPILLKAAGKNCASRIGFAFHGQTIKTGFYRHIFVQTALINMYGTL--HCTADA 104
R +++ +P++LK+ ++ H K+GF+ ++ VQTAL++ Y + H T A
Sbjct: 123 RPNHFIYPLVLKSTPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITL-A 181
Query: 105 CKMFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMPLKDLSSFNILISGYSSCGEVL 164
++F+ M +++V+W +ML YA +G++ +A++LF MP +D+ S+N +++ + G L
Sbjct: 182 RQLFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFL 241
Query: 165 AARSIFDKMAIKDIVSWNSI-----LSACTRAG--------------------------- 192
A S+F +M + + N + LSAC + G
Sbjct: 242 EAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSL 301
Query: 193 --------DMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNC---L 241
++E+A ++F+ K+ +WN+M+ G+ EA+ +F+EM N
Sbjct: 302 VDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIK 361
Query: 242 PDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVT--TALMDMYAKCGSIEQAL 299
PD++T +L+AC H G + G + + + + P + L+D+ + G ++AL
Sbjct: 362 PDHITFIGLLNACTHGGLVSKG-RGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEAL 420
Query: 300 QIFFKAQVK-DIYCWNAIISGLALHGH 325
++ ++K D W ++++ +HGH
Sbjct: 421 EVMSTMKMKADEAIWGSLLNACKIHGH 447
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 108/269 (40%), Gaps = 44/269 (16%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNM-QVHGFRADNYTFPILLKAAGKNCASRI 68
MP +V WN I+ G +AV + M R + T +L A + ++
Sbjct: 219 MPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQL 278
Query: 69 GFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYAS 128
H + +FV +L+++YG +A +F+ K L AWNSM++ +A
Sbjct: 279 AKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFAL 338
Query: 129 NGEMEDAISLFHMMPLKDLSSFNILISGYSSCGEVLAARSIFDKMAIKDI----VSWNSI 184
+G E+AI++F M K+ I DI +++ +
Sbjct: 339 HGRSEEAIAVFEEMM----------------------------KLNINDIKPDHITFIGL 370
Query: 185 LSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCL-----QRGQFSEAVDLFDEMKTTN 239
L+ACT G + K F M + I GCL + G+F EA+++ MK
Sbjct: 371 LNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMK- 429
Query: 240 CLPDYLTATSVLSAC---AHLGSLETGIK 265
D S+L+AC HL E +K
Sbjct: 430 --ADEAIWGSLLNACKIHGHLDLAEVAVK 456
>AT1G56690.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:21253817-21255931 FORWARD
Length = 704
Score = 151 bits (382), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 88/264 (33%), Positives = 134/264 (50%), Gaps = 31/264 (11%)
Query: 104 ACKMFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMPLKDLSSFNILISGYSSCGEV 163
A K+++ MPVKD+VA +M+ G +++A +F M +++ ++ +I+GY V
Sbjct: 160 ARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRV 219
Query: 164 LAARSIFDKMAIKDIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRG 223
AR +F+ M K VSW S+L T +G +E A F+ MPMK I+ N M+ G + G
Sbjct: 220 DVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVG 279
Query: 224 QFS-------------------------------EAVDLFDEMKTTNCLPDYLTATSVLS 252
+ S EA+DLF +M+ P + + S+LS
Sbjct: 280 EISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILS 339
Query: 253 ACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYC 312
CA L SL+ G ++H + + +V + LM MY KCG + +A +F + KDI
Sbjct: 340 VCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIM 399
Query: 313 WNAIISGLALHGHGYAALKLFGYM 336
WN+IISG A HG G ALK+F M
Sbjct: 400 WNSIISGYASHGLGEEALKIFHEM 423
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 122/257 (47%), Gaps = 10/257 (3%)
Query: 83 RHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMM 142
R++ L++ Y +A +FE MP +++V+W +M+ Y G + +A SLF M
Sbjct: 77 RNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRM 136
Query: 143 PLKDLSSFNILISGYSSCGEVLAARSIFDKMAIKDIVSWNSILSACTRAGDMEKAFALFQ 202
P ++ S+ ++ G G + AR ++D M +KD+V+ +++ R G +++A +F
Sbjct: 137 PERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFD 196
Query: 203 EMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLET 262
EM +N ++W TM+ G Q + A LF+ M ++ TS+L G +E
Sbjct: 197 EMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKT----EVSWTSMLLGYTLSGRIED 252
Query: 263 GIKIHVYAIYSGLASSPHVT-TALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLA 321
+ + P + A++ + + G I +A ++F + +D W +I
Sbjct: 253 A-----EEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYE 307
Query: 322 LHGHGYAALKLFGYMKK 338
G AL LF M+K
Sbjct: 308 RKGFELEALDLFAQMQK 324
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 140/289 (48%), Gaps = 17/289 (5%)
Query: 57 LKAAGKNCA------SRIGFAFHGQTIKTGF-YRHIFVQTALINMYGTLHCTADACKMFE 109
L + G NC+ SRIG + ++ I ++++ Y + +A ++F+
Sbjct: 13 LTSTGVNCSFEISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFD 72
Query: 110 NMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMPLKDLSSFNILISGYSSCGEVLAARSI 169
M +++V+WN ++ Y N + +A ++F +MP +++ S+ ++ GY G V A S+
Sbjct: 73 EMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESL 132
Query: 170 FDKMAIKDIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAV 229
F +M ++ VSW + G ++KA L+ MP+K+ ++ M+ G + G+ EA
Sbjct: 133 FWRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEAR 192
Query: 230 DLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVT-TALMDM 288
+FDEM+ N +T T++++ ++ K ++ + V+ T+++
Sbjct: 193 LIFDEMRERNV----VTWTTMITGYRQNNRVDVARK-----LFEVMPEKTEVSWTSMLLG 243
Query: 289 YAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMK 337
Y G IE A + F +K + NA+I G G A ++F M+
Sbjct: 244 YTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLME 292
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 96/212 (45%), Gaps = 10/212 (4%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTI 77
W +IK + G +A+ + MQ G R + +L + + G H +
Sbjct: 299 WRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLV 358
Query: 78 KTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAIS 137
+ F ++V + L+ MY A +F+ KD++ WNS++ YAS+G E+A+
Sbjct: 359 RCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALK 418
Query: 138 LFHMMP----LKDLSSFNILISGYSSCGEVLAARSIFDKMAIKDIVSWNSILSACT---- 189
+FH MP + + + +++ S G++ IF+ M K V+ +CT
Sbjct: 419 IFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDML 478
Query: 190 -RAGDMEKAFALFQEMPMK-NTISWNTMLAGC 219
RAG ++KA L + M +K + W +L C
Sbjct: 479 GRAGQVDKAMELIESMTIKPDATVWGALLGAC 510
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 108/296 (36%), Gaps = 105/296 (35%)
Query: 83 RHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMM 142
R++ T +I Y + A K+FE MP K V+W SML Y +G +EDA F +M
Sbjct: 201 RNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVM 260
Query: 143 PLKDLSSFNILISG-------------------------------YSSCGEVLAARSIFD 171
P+K + + N +I G Y G L A +F
Sbjct: 261 PMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFA 320
Query: 172 KMAIKDIV----SWNSILSAC-----------------------------------TRAG 192
+M + + S SILS C + G
Sbjct: 321 QMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCG 380
Query: 193 DMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLS 252
++ KA +F K+ I WN++++G G EA+ +F EM ++ +P+ +T ++L+
Sbjct: 381 ELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILT 440
Query: 253 ACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVK 308
AC++ G LE + L+IF + K
Sbjct: 441 ACSYAGKLE-----------------------------------EGLEIFESMESK 461
>AT2G36980.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15531161-15533038 FORWARD
Length = 625
Score = 150 bits (380), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 104/400 (26%), Positives = 170/400 (42%), Gaps = 73/400 (18%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
MP L+ WN ++ + +G ++A+ + ++ + D+Y+F +L + G
Sbjct: 30 MPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSFTAILSTCASLGNVKFG 89
Query: 70 FAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENM------------------ 111
I++GF + V +LI+MYG T A K+F +M
Sbjct: 90 RKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCDSRNEVTWCSLLFAYM 149
Query: 112 ---------------PVKDLVAWNSMLDAYASNGEMEDAISLF----------------- 139
P + AWN M+ +A G++E +SLF
Sbjct: 150 NAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESEFKPDCYTFSS 209
Query: 140 ------------------HMMPLKD-----LSSFNILISGYSSCGEVLAARSIFDKMAIK 176
H + LK+ + + N ++S Y+ G A + + +
Sbjct: 210 LMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVL 269
Query: 177 DIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMK 236
VSWNSI+ AC + G+ EKA +F P KN ++W TM+ G + G +A+ F EM
Sbjct: 270 TQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMM 329
Query: 237 TTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIE 296
+ D+ +VL AC+ L L G IH I+ G +V AL+++YAKCG I+
Sbjct: 330 KSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIK 389
Query: 297 QALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYM 336
+A + F KD+ WN ++ +HG ALKL+ M
Sbjct: 390 EADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNM 429
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/363 (25%), Positives = 159/363 (43%), Gaps = 48/363 (13%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRI- 68
MP WN +I H G E + + M F+ D YTF L+ A + ++ +
Sbjct: 164 MPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVY 223
Query: 69 GFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYAS 128
G H +K G+ + + ++++ Y L DA + E++ V V+WNS++DA
Sbjct: 224 GRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMK 283
Query: 129 NGEMEDAISLFHMMPLKDLSSFNILISGYSSCGEVLAARSIFDKM----AIKDIVSWNSI 184
GE E A+ +FH+ P K++ ++ +I+GY G+ A F +M D ++ ++
Sbjct: 284 IGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAV 343
Query: 185 LSACT-----------------------------------RAGDMEKAFALFQEMPMKNT 209
L AC+ + GD+++A F ++ K+
Sbjct: 344 LHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDL 403
Query: 210 ISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVY 269
+SWNTML G +A+ L+D M + PD +T +L+ C+H G +E G I
Sbjct: 404 VSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFES 463
Query: 270 AI--YSGLASSPHVTTALMDMYAKCGSIEQA--LQIFFKAQVKDI---YCWNAIISGLAL 322
+ Y HV T ++DM+ + G + +A L + + V D W ++ +
Sbjct: 464 MVKDYRIPLEVDHV-TCMIDMFGRGGHLAEAKDLATTYSSLVTDSSNNSSWETLLGACST 522
Query: 323 HGH 325
H H
Sbjct: 523 HWH 525
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 89/192 (46%), Gaps = 33/192 (17%)
Query: 178 IVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKT 237
+V S +++ ++G + A +F MP +T++WNTML + G EA+ LF +++
Sbjct: 4 LVRLTSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRF 63
Query: 238 TNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGS--- 294
++ PD + T++LS CA LG+++ G KI I SG +S V +L+DMY KC
Sbjct: 64 SDAKPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLS 123
Query: 295 ------------------------------IEQALQIFFKAQVKDIYCWNAIISGLALHG 324
E AL +F + + + WN +ISG A G
Sbjct: 124 ANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCG 183
Query: 325 HGYAALKLFGYM 336
+ L LF M
Sbjct: 184 KLESCLSLFKEM 195
>AT2G03380.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:1028292-1030361 FORWARD
Length = 689
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 101/330 (30%), Positives = 165/330 (50%), Gaps = 9/330 (2%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTI 77
W +I ++ E+ ++ + M+ + + YT+ L+ A K A G FHG +
Sbjct: 210 WTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLV 269
Query: 78 KTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAIS 137
K+G + T+L++MY ++A ++F DLV W +M+ Y NG + +A+S
Sbjct: 270 KSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALS 329
Query: 138 LFHMMPLKDLSSFNILI-SGYSSCG---EVLAARSIFD---KMAIKDIVSWNSILSACTR 190
LF M ++ + I S S CG + RS+ K+ I D N+++ +
Sbjct: 330 LFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDTNVANALVHMYAK 389
Query: 191 AGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSV 250
A +F+ K+ ++WN++++G Q G EA+ LF M + + P+ +T S+
Sbjct: 390 CYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASL 449
Query: 251 LSACAHLGSLETGIKIHVYAIYSGL--ASSPHVTTALMDMYAKCGSIEQALQIFFKAQVK 308
SACA LGSL G +H Y++ G +SS HV TAL+D YAKCG + A IF + K
Sbjct: 450 FSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEK 509
Query: 309 DIYCWNAIISGLALHGHGYAALKLFGYMKK 338
+ W+A+I G G +L+LF M K
Sbjct: 510 NTITWSAMIGGYGKQGDTIGSLELFEEMLK 539
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 161/319 (50%), Gaps = 15/319 (4%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTI 77
W +I + G+ +A+ + M+ + + T +L G +G + HG +I
Sbjct: 311 WTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSI 370
Query: 78 KTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAIS 137
K G + V AL++MY + DA +FE KD+VAWNS++ ++ NG + +A+
Sbjct: 371 KVGIW-DTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALF 429
Query: 138 LFHMMPLKDLSSFNILISG-YSSC--------GEVLAARSI-FDKMAIKDIVSWNSILSA 187
LFH M + ++ + ++ +S+C G L A S+ +A + ++L
Sbjct: 430 LFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDF 489
Query: 188 CTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTA 247
+ GD + A +F + KNTI+W+ M+ G ++G +++LF+EM P+ T
Sbjct: 490 YAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTF 549
Query: 248 TSVLSACAHLGSLETGIKI--HVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKA 305
TS+LSAC H G + G K +Y Y+ S+ H T ++DM A+ G +EQAL I K
Sbjct: 550 TSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHY-TCMVDMLARAGELEQALDIIEKM 608
Query: 306 QVK-DIYCWNAIISGLALH 323
++ D+ C+ A + G +H
Sbjct: 609 PIQPDVRCFGAFLHGCGMH 627
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/340 (28%), Positives = 159/340 (46%), Gaps = 20/340 (5%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
+P + W +++ + L + + V Y + HGFR D+ F LKA + G
Sbjct: 102 IPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNG 161
Query: 70 FAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASN 129
H Q +K + ++ V T L++MY A K+F ++ ++++V W SM+ Y N
Sbjct: 162 KKIHCQLVKVPSFDNV-VLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKN 220
Query: 130 GEMEDAISLFHMMPLKDLSSFNILISGYSSCGEVLAARSI--------FDKMAIKDIVSW 181
E+ + LF+ M N+L + Y+ ++A + F +K +
Sbjct: 221 DLCEEGLVLFNRM-----RENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIEL 275
Query: 182 N-----SILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMK 236
+ S+L + GD+ A +F E + + W M+ G G +EA+ LF +MK
Sbjct: 276 SSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMK 335
Query: 237 TTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIE 296
P+ +T SVLS C + +LE G +H +I G+ + +V AL+ MYAKC
Sbjct: 336 GVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDT-NVANALVHMYAKCYQNR 394
Query: 297 QALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYM 336
A +F KDI WN+IISG + +G + AL LF M
Sbjct: 395 DAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRM 434
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 129/272 (47%), Gaps = 7/272 (2%)
Query: 73 HGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEM 132
HG G I + T L+++YG T DA +F+ +P D W ML Y N E
Sbjct: 64 HGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKES 123
Query: 133 EDAISLFHMMPLKDLSSFNILIS-GYSSCGEVLA---ARSI---FDKMAIKDIVSWNSIL 185
+ + L+ ++ +I+ S +C E+ + I K+ D V +L
Sbjct: 124 VEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNVVLTGLL 183
Query: 186 SACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYL 245
+ G+++ A +F ++ ++N + W +M+AG ++ E + LF+ M+ N L +
Sbjct: 184 DMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEY 243
Query: 246 TATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKA 305
T +++ AC L +L G H + SG+ S + T+L+DMY KCG I A ++F +
Sbjct: 244 TYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEH 303
Query: 306 QVKDIYCWNAIISGLALHGHGYAALKLFGYMK 337
D+ W A+I G +G AL LF MK
Sbjct: 304 SHVDLVMWTAMIVGYTHNGSVNEALSLFQKMK 335
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 72/152 (47%), Gaps = 11/152 (7%)
Query: 192 GDMEKAFALFQEMPMKNTISWNTMLAG-CLQRGQFSEAVDLFDEMKTTNCLPDYLTATSV 250
G + A +F ++P + W ML CL + + E V L+D + D + +
Sbjct: 90 GYTKDARLVFDQIPEPDFYLWKVMLRCYCLNK-ESVEVVKLYDLLMKHGFRYDDIVFSKA 148
Query: 251 LSACAHLGSLETGIKIHVYAIYSGLASSPH----VTTALMDMYAKCGSIEQALQIFFKAQ 306
L AC L L+ G KIH L P V T L+DMYAKCG I+ A ++F
Sbjct: 149 LKACTELQDLDNGKKIHCQ-----LVKVPSFDNVVLTGLLDMYAKCGEIKSAHKVFNDIT 203
Query: 307 VKDIYCWNAIISGLALHGHGYAALKLFGYMKK 338
++++ CW ++I+G + L LF M++
Sbjct: 204 LRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRE 235
>AT3G53360.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:19784502-19786808 FORWARD
Length = 768
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 100/338 (29%), Positives = 161/338 (47%), Gaps = 10/338 (2%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHG-FRADNYTFPILLKAAGKNCASRI 68
+P ++ W+ II +G +A+ M G F + Y F LKA
Sbjct: 229 IPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDY 288
Query: 69 GFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYAS 128
G HG IK+ + +L +MY A ++F+ + D +WN ++ A+
Sbjct: 289 GSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLAN 348
Query: 129 NGEMEDAISLFHMMP----LKDLSSFNILISGYSSCGEVLAARSIFDKMA----IKDIVS 180
NG ++A+S+F M + D S L+ + + I + + D+
Sbjct: 349 NGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTV 408
Query: 181 WNSILSACTRAGDMEKAFALFQEMPMK-NTISWNTMLAGCLQRGQFSEAVDLFDEMKTTN 239
NS+L+ T D+ F LF++ +++SWNT+L CLQ Q E + LF M +
Sbjct: 409 CNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSE 468
Query: 240 CLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQAL 299
C PD++T ++L C + SL+ G ++H Y++ +GLA + L+DMYAKCGS+ QA
Sbjct: 469 CEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQAR 528
Query: 300 QIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMK 337
+IF +D+ W+ +I G A G G AL LF MK
Sbjct: 529 RIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMK 566
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/345 (27%), Positives = 160/345 (46%), Gaps = 24/345 (6%)
Query: 9 FMPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRI 68
FMP + + +I + G +A+ Y+ M D + F ++KA + +
Sbjct: 127 FMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGL 186
Query: 69 GFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYAS 128
G H Q IK H+ Q ALI MY + +DA ++F +P+KDL++W+S++ ++
Sbjct: 187 GKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQ 246
Query: 129 NGEMEDAISLFHMMPLKDLSSFN-------ILISGYSSCGEVLAAR--SIFDKMAIKDIV 179
G +A+S LK++ SF I S +C +L S + IK +
Sbjct: 247 LGFEFEALS-----HLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSEL 301
Query: 180 SWNSILSACT------RAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFD 233
+ N+I + C+ R G + A +F ++ +T SWN ++AG G EAV +F
Sbjct: 302 AGNAI-AGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFS 360
Query: 234 EMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCG 293
+M+++ +PD ++ S+L A +L G++IH Y I G + V +L+ MY C
Sbjct: 361 QMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCS 420
Query: 294 SIEQALQIF--FKAQVKDIYCWNAIISGLALHGHGYAALKLFGYM 336
+ +F F+ D WN I++ H L+LF M
Sbjct: 421 DLYCCFNLFEDFRNNA-DSVSWNTILTACLQHEQPVEMLRLFKLM 464
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 154/313 (49%), Gaps = 16/313 (5%)
Query: 41 MQVHGFRADNYTFPILLK-------AAGKNCASRIGFAFHGQTIKTGFYRHIFVQTALIN 93
++ F N +F I L+ A + + G H + + + +++
Sbjct: 51 LEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILS 110
Query: 94 MYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMPLKDLS----S 149
MYG DA ++F+ MP ++LV++ S++ Y+ NG+ +AI L+ M +DL +
Sbjct: 111 MYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFA 170
Query: 150 FNILISGYSSCGEVLAARSIFDKM----AIKDIVSWNSILSACTRAGDMEKAFALFQEMP 205
F +I +S +V + + ++ + +++ N++++ R M A +F +P
Sbjct: 171 FGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIP 230
Query: 206 MKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCL-PDYLTATSVLSACAHLGSLETGI 264
MK+ ISW++++AG Q G EA+ EM + P+ S L AC+ L + G
Sbjct: 231 MKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGS 290
Query: 265 KIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHG 324
+IH I S LA + +L DMYA+CG + A ++F + + D WN II+GLA +G
Sbjct: 291 QIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNG 350
Query: 325 HGYAALKLFGYMK 337
+ A+ +F M+
Sbjct: 351 YADEAVSVFSQMR 363
Score = 115 bits (288), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 159/328 (48%), Gaps = 17/328 (5%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTI 77
WN II G A++AV + M+ GF D + LL A K A G H I
Sbjct: 339 WNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYII 398
Query: 78 KTGFYRHIFVQTALINMY---GTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMED 134
K GF + V +L+ MY L+C + + F N D V+WN++L A + + +
Sbjct: 399 KWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNA--DSVSWNTILTACLQHEQPVE 456
Query: 135 AISLFHMMPLKDLSSFNILISGY-SSCGEVLAAR--------SIFDKMAIKDIVSWNSIL 185
+ LF +M + + +I + C E+ + + S+ +A + + N ++
Sbjct: 457 MLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIK-NGLI 515
Query: 186 SACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYL 245
+ G + +A +F M ++ +SW+T++ G Q G EA+ LF EMK+ P+++
Sbjct: 516 DMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHV 575
Query: 246 TATSVLSACAHLGSLETGIKIH-VYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFK 304
T VL+AC+H+G +E G+K++ G++ + + ++D+ A+ G + +A + +
Sbjct: 576 TFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDE 635
Query: 305 AQVK-DIYCWNAIISGLALHGHGYAALK 331
+++ D+ W ++S G+ + A K
Sbjct: 636 MKLEPDVVVWKTLLSACKTQGNVHLAQK 663
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 58/110 (52%), Gaps = 1/110 (0%)
Query: 225 FSEAVDLFDEMKTTNCLPDYL-TATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTT 283
+ EA++ FD + + L T S++ AC+ SL G KIH + + S +
Sbjct: 47 YREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNN 106
Query: 284 ALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLF 333
++ MY KCGS+ A ++F +++ + ++I+G + +G G A++L+
Sbjct: 107 HILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLY 156
>AT3G04750.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:1301391-1303376 REVERSE
Length = 661
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 108/345 (31%), Positives = 164/345 (47%), Gaps = 47/345 (13%)
Query: 38 YVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTIKTG-FYRHIFVQTALINMYG 96
Y +M H D TF L+KA+ + H I +G ++ +L+ Y
Sbjct: 121 YSSMIRHRVSPDRQTFLYLMKASSFLSEVK---QIHCHIIVSGCLSLGNYLWNSLVKFYM 177
Query: 97 TLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMP------------- 143
L A K+F MP D+ ++N M+ YA G +A+ L+ M
Sbjct: 178 ELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLS 237
Query: 144 -------LKDLS----------------SFNILISG-----YSSCGEVLAARSIFDKMAI 175
L D+ S N+++S Y C E A+ FD M
Sbjct: 238 LLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKK 297
Query: 176 KDIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAV-DLFDE 234
KD+ SWN+++ R GDME A A+F +MP ++ +SWN++L G ++G V +LF E
Sbjct: 298 KDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYE 357
Query: 235 MKTTNCL-PDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCG 293
M + PD +T S++S A+ G L G +H I L +++AL+DMY KCG
Sbjct: 358 MTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCG 417
Query: 294 SIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMKK 338
IE+A +F A KD+ W ++I+GLA HG+G AL+LFG M++
Sbjct: 418 IIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQE 462
>AT5G48910.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:19832969-19834909 REVERSE
Length = 646
Score = 148 bits (373), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 103/333 (30%), Positives = 161/333 (48%), Gaps = 53/333 (15%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAV----LTYVNMQVHGFRADNYTFPILLKAAGKNCA 65
MP WN II+ + ++A+ L Y M + +TFP +LKA K
Sbjct: 85 MPQRNCFSWNTIIRG-FSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGK 143
Query: 66 SRIGFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDA 125
+ G HG +K GF FV + L+ M
Sbjct: 144 IQEGKQIHGLALKYGFGGDEFVMSNLVRM------------------------------- 172
Query: 126 YASNGEMEDAISLFHMMPLKDLSSFNILISGYSSCGEVLAARSIFDKMAIKDIVSWNSIL 185
Y G M+DA LF+ K++ +++ V+ R D +IV WN ++
Sbjct: 173 YVMCGFMKDARVLFY----KNIIEKDMV---------VMTDRRKRDG----EIVLWNVMI 215
Query: 186 SACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYL 245
R GD + A LF +M ++ +SWNTM++G G F +AV++F EMK + P+Y+
Sbjct: 216 DGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYV 275
Query: 246 TATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKA 305
T SVL A + LGSLE G +H+YA SG+ + +AL+DMY+KCG IE+A+ +F +
Sbjct: 276 TLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERL 335
Query: 306 QVKDIYCWNAIISGLALHGHGYAALKLFGYMKK 338
+++ W+A+I+G A+HG A+ F M++
Sbjct: 336 PRENVITWSAMINGFAIHGQAGDAIDCFCKMRQ 368
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 89/191 (46%), Gaps = 33/191 (17%)
Query: 175 IKDIVSWNSILSACTRAG----DMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSE--- 227
++D ++ IL C + D++ A +F +MP +N SWNT++ G FSE
Sbjct: 52 MRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNTIIRG------FSESDE 105
Query: 228 -----AVDLFDEMKTTNCL-PDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHV 281
A+ LF EM + + P+ T SVL ACA G ++ G +IH A+ G V
Sbjct: 106 DKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFV 165
Query: 282 TTALMDMYAKCGSIEQALQIFFKAQVK--------------DIYCWNAIISGLALHGHGY 327
+ L+ MY CG ++ A +F+K ++ +I WN +I G G
Sbjct: 166 MSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCK 225
Query: 328 AALKLFGYMKK 338
AA LF M++
Sbjct: 226 AARMLFDKMRQ 236
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/306 (21%), Positives = 125/306 (40%), Gaps = 36/306 (11%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
M V WN +I + L G + AV + M+ R + T +L A + + +G
Sbjct: 234 MRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELG 293
Query: 70 FAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASN 129
H +G + +ALI+MY A +FE +P ++++ W++M++ +A +
Sbjct: 294 EWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIH 353
Query: 130 GEMEDAISLFHMMPLKDLSSFNILISGYSSCGEVLAARSIFDKMAIKDIVSWNSILSACT 189
G+ DAI F M + + V++ ++L+AC+
Sbjct: 354 GQAGDAIDCFCKMRQAGVRPSD---------------------------VAYINLLTACS 386
Query: 190 RAGDMEKAFALFQEMPMKNTISWNTMLAGCL-----QRGQFSEAVDLFDEMKTTNCLPDY 244
G +E+ F +M + + GC+ + G EA + M PD
Sbjct: 387 HGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIK---PDD 443
Query: 245 LTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFK 304
+ ++L AC G++E G ++ + + AL +MYA G+ + ++ +
Sbjct: 444 VIWKALLGACRMQGNVEMGKRV-ANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLR 502
Query: 305 AQVKDI 310
+ KDI
Sbjct: 503 MKEKDI 508
>AT5G06540.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1999181-2001049 REVERSE
Length = 622
Score = 148 bits (373), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 90/299 (30%), Positives = 138/299 (46%), Gaps = 62/299 (20%)
Query: 38 YVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTIKTGFYRHIFVQTALINMYGT 97
Y M DN TFP L+KA+ + +G H Q ++ GF
Sbjct: 105 YTQMLKSRIWPDNITFPFLIKASSEMECVLVGEQTHSQIVRFGFQN-------------- 150
Query: 98 LHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMPLKDLSSFNILISGY 157
D Y N SL HM Y
Sbjct: 151 --------------------------DVYVEN-------SLVHM---------------Y 162
Query: 158 SSCGEVLAARSIFDKMAIKDIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLA 217
++CG + AA IF +M +D+VSW S+++ + G +E A +F EMP +N +W+ M+
Sbjct: 163 ANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMIN 222
Query: 218 GCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLAS 277
G + F +A+DLF+ MK + + SV+S+CAHLG+LE G + + Y + S +
Sbjct: 223 GYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTV 282
Query: 278 SPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYM 336
+ + TAL+DM+ +CG IE+A+ +F D W++II GLA+HGH + A+ F M
Sbjct: 283 NLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQM 341
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 77/170 (45%), Gaps = 9/170 (5%)
Query: 175 IKDIVSWNSILSACTRAGDMEK-------AFALFQEMPMKNTISWNTMLAGCLQRG-QFS 226
I D+ + +L+ C K A+ +F ++ N +N +L C G + S
Sbjct: 41 ISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFSQIQNPNLFVFN-LLIRCFSTGAEPS 99
Query: 227 EAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALM 286
+A + +M + PD +T ++ A + + + G + H + G + +V +L+
Sbjct: 100 KAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLV 159
Query: 287 DMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYM 336
MYA CG I A +IF + +D+ W ++++G G A ++F M
Sbjct: 160 HMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEM 209
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 75/161 (46%), Gaps = 12/161 (7%)
Query: 115 DLVAWNSMLDAYASNGEMEDAISLFHMMPLKDLSSFNILISGYSSCGEVLAARSIFDKMA 174
+L+ +++D + G++E AI +F +P D S++ +I G + G A F +M
Sbjct: 283 NLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMI 342
Query: 175 ----IKDIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCL-----QRGQF 225
I V++ ++LSAC+ G +EK +++ M + I GC+ + G+
Sbjct: 343 SLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKL 402
Query: 226 SEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKI 266
+EA + +M P+ ++L AC + E ++
Sbjct: 403 AEAENFILKMHVK---PNAPILGALLGACKIYKNTEVAERV 440
>AT3G26540.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:9744542-9746644 REVERSE
Length = 700
Score = 148 bits (373), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 93/369 (25%), Positives = 170/369 (46%), Gaps = 42/369 (11%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
MP + WN +I G +++ + M G RA +F +LK+ G R+
Sbjct: 122 MPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLL 181
Query: 70 FAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASN 129
H +K G+ ++ ++T+++++YG +DA ++F+ + V+WN ++ Y
Sbjct: 182 RQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEM 241
Query: 130 GEMEDAISLFHMMPLKDLSSFNILISG--------------------------------- 156
G ++A+ +F M ++ N +S
Sbjct: 242 GFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVS 301
Query: 157 ------YSSCGEVLAARSIFDKMAIKDIVSWNSILSACTRAGDMEKAFALFQEMPMKNTI 210
Y C + +AR +FD+ KD+ SW S +S +G +A LF MP +N +
Sbjct: 302 TSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIV 361
Query: 211 SWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYA 270
SWN ML G + ++ EA+D M+ D +T +L+ C+ + ++ G + H +
Sbjct: 362 SWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFI 421
Query: 271 IYSGLASSPHVTTALMDMYAKCGSIEQALQIFFK--AQVKDIYCWNAIISGLALHGHGYA 328
G ++ V AL+DMY KCG+++ A I+F+ ++++D WNA+++G+A G
Sbjct: 422 YRHGYDTNVIVANALLDMYGKCGTLQSA-NIWFRQMSELRDEVSWNALLTGVARVGRSEQ 480
Query: 329 ALKLFGYMK 337
AL F M+
Sbjct: 481 ALSFFEGMQ 489
Score = 138 bits (347), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 87/356 (24%), Positives = 162/356 (45%), Gaps = 41/356 (11%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTI 77
WN I+++++ +G ++AV+ + M R N+T ++ A ++ A +G H +
Sbjct: 231 WNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAV 290
Query: 78 KTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAIS 137
K V T++ +MY A ++F+ KDL +W S + YA +G +A
Sbjct: 291 KLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARE 350
Query: 138 LFHMMPLKDLSSFNILISGYSSCGEVLAARSIFDKM--------------------AIKD 177
LF +MP +++ S+N ++ GY E A M I D
Sbjct: 351 LFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISD 410
Query: 178 I-------------------VSWNSILSACTRAGDMEKAFALFQEM-PMKNTISWNTMLA 217
+ + N++L + G ++ A F++M +++ +SWN +L
Sbjct: 411 VQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLT 470
Query: 218 GCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLAS 277
G + G+ +A+ F+ M+ P T ++L+ CA++ +L G IH + I G
Sbjct: 471 GVARVGRSEQALSFFEGMQV-EAKPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKI 529
Query: 278 SPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLF 333
+ A++DMY+KC + A+++F +A +D+ WN+II G +G +LF
Sbjct: 530 DVVIRGAMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFELF 585
Score = 121 bits (303), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 80/262 (30%), Positives = 129/262 (49%), Gaps = 8/262 (3%)
Query: 85 IFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMPL 144
IF+ I YG C DA ++FE MP +D +WN+++ A A NG ++ +F M
Sbjct: 96 IFLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNR 155
Query: 145 KDLSSFNILISGY-SSCGEVLAARSI--FDKMAIKDIVSWN-----SILSACTRAGDMEK 196
+ + +G SCG +L R + +K S N SI+ + M
Sbjct: 156 DGVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSD 215
Query: 197 AFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAH 256
A +F E+ + +SWN ++ L+ G EAV +F +M N P T +SV+ AC+
Sbjct: 216 ARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSR 275
Query: 257 LGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAI 316
+LE G IH A+ + + V+T++ DMY KC +E A ++F + + KD+ W +
Sbjct: 276 SLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSA 335
Query: 317 ISGLALHGHGYAALKLFGYMKK 338
+SG A+ G A +LF M +
Sbjct: 336 MSGYAMSGLTREARELFDLMPE 357
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 139/306 (45%), Gaps = 25/306 (8%)
Query: 9 FMPSLEVRRWNEIIKKHMLVGNAEQAV--LTYVNMQVHGFRADNYTFPILLKAAGKNCAS 66
MP + WN ++ ++ ++A+ LT + ++ DN T +L
Sbjct: 354 LMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENI--DNVTLVWILNVCSGISDV 411
Query: 67 RIGFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENM-PVKDLVAWNSMLDA 125
++G HG + G+ ++ V AL++MYG A F M ++D V+WN++L
Sbjct: 412 QMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTG 471
Query: 126 YASNGEMEDAISLFHMMPLKDLSSFNILISGYSSC--------GEVLAARSIFDKMAIKD 177
A G E A+S F M ++ S L + + C G+ + I D I D
Sbjct: 472 VARVGRSEQALSFFEGMQVEAKPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKI-D 530
Query: 178 IVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKT 237
+V +++ ++ + A +F+E ++ I WN+++ GC + G+ E +LF ++
Sbjct: 531 VVIRGAMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFELFMLLEN 590
Query: 238 TNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTA------LMDMYAK 291
PD++T +L AC G +E G + +S +++ H++ ++++Y K
Sbjct: 591 EGVKPDHVTFLGILQACIREGHVELG-----FQYFSSMSTKYHISPQVEHYDCMIELYCK 645
Query: 292 CGSIEQ 297
G + Q
Sbjct: 646 YGCLHQ 651
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 79/194 (40%), Gaps = 31/194 (15%)
Query: 143 PLKDLSSFNILISGYSSCGEVLAARSIFDKMAIKDIVSWNSILSACTRAGDMEKAFALFQ 202
PL + N I Y CG V AR +F++M +D SWN++++AC + G ++ F +F+
Sbjct: 92 PLPPIFLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFR 151
Query: 203 EMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLET 262
M + T AG VL +C + L
Sbjct: 152 RMNRDGVRATETSFAG-------------------------------VLKSCGLILDLRL 180
Query: 263 GIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLAL 322
++H + G + + + T+++D+Y KC + A ++F + WN I+
Sbjct: 181 LRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLE 240
Query: 323 HGHGYAALKLFGYM 336
G A+ +F M
Sbjct: 241 MGFNDEAVVMFFKM 254
>AT4G19191.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 13 plant structures;
EXPRESSED DURING: 10 growth stages; CONTAINS InterPro
DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885);
BEST Arabidopsis thaliana protein match is: CRR22
(CHLORORESPIRATORY REDUCTION22); endonuclease
(TAIR:AT1G11290.1); Has 16668 Blast hits to 5144
proteins in 160 species: Archae - 1; Bacteria - 6;
Metazoa - 71; Fungi - 62; Plants - 16190; Viruses - 0;
Other Eukaryotes - 338 (source: NCBI BLink). |
chr4:10496228-10498192 FORWARD
Length = 654
Score = 147 bits (372), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 108/341 (31%), Positives = 167/341 (48%), Gaps = 17/341 (4%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
MP + WN ++ G+ ++A + M+++ D+ T L+++A + ++
Sbjct: 113 MPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLL 172
Query: 70 FAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKD--LVAWNSMLDAYA 127
A H I+ G + V I+ YG A +FE + D +V+WNSM AY+
Sbjct: 173 EAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYS 232
Query: 128 SNGEMEDAISLFHMMPLK----DLSSFNILISGYSSCG--EVLAARSIFDKMAI-----K 176
GE DA L+ +M + DLS+F I+ +SC E L + AI +
Sbjct: 233 VFGEAFDAFGLYCLMLREEFKPDLSTF---INLAASCQNPETLTQGRLIHSHAIHLGTDQ 289
Query: 177 DIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMK 236
DI + N+ +S +++ D A LF M + +SW M++G ++G EA+ LF M
Sbjct: 290 DIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMI 349
Query: 237 TTNCLPDYLTATSVLSACAHLGSLETGIKIHVYA-IYSGLASSPHVTTALMDMYAKCGSI 295
+ PD +T S++S C GSLETG I A IY + + AL+DMY+KCGSI
Sbjct: 350 KSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSI 409
Query: 296 EQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYM 336
+A IF K + W +I+G AL+G ALKLF M
Sbjct: 410 HEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKM 450
Score = 128 bits (322), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 97/325 (29%), Positives = 154/325 (47%), Gaps = 21/325 (6%)
Query: 15 VRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRI-GFAFH 73
V WN + K + + G A A Y M F+ D TF I L A+ +N + G H
Sbjct: 221 VVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTF-INLAASCQNPETLTQGRLIH 279
Query: 74 GQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEME 133
I G + I I+MY T A +F+ M + V+W M+ YA G+M+
Sbjct: 280 SHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMD 339
Query: 134 DAISLFHMM----PLKDLSSFNILISGYSSCGEVLAARSIFDKMAI-----KDIVSWNSI 184
+A++LFH M DL + LISG G + + I + I +++ N++
Sbjct: 340 EALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNAL 399
Query: 185 LSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDY 244
+ ++ G + +A +F P K ++W TM+AG G F EA+ LF +M + P++
Sbjct: 400 IDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNH 459
Query: 245 LTATSVLSACAHLGSLETG-----IKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQAL 299
+T +VL ACAH GSLE G I VY I GL + ++D+ + G +E+AL
Sbjct: 460 ITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDH----YSCMVDLLGRKGKLEEAL 515
Query: 300 QIFFKAQVK-DIYCWNAIISGLALH 323
++ K D W A+++ +H
Sbjct: 516 ELIRNMSAKPDAGIWGALLNACKIH 540
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 67/138 (48%)
Query: 200 LFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGS 259
L++ + + +WN + + R E++ LF EMK P+ T V ACA L
Sbjct: 8 LYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLAD 67
Query: 260 LETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISG 319
+ +H + I S S V TA +DM+ KC S++ A ++F + +D WNA++SG
Sbjct: 68 VGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSG 127
Query: 320 LALHGHGYAALKLFGYMK 337
GH A LF M+
Sbjct: 128 FCQSGHTDKAFSLFREMR 145
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 73/162 (45%), Gaps = 2/162 (1%)
Query: 177 DIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMK 236
D+ + + + ++ A +F+ MP ++ +WN ML+G Q G +A LF EM+
Sbjct: 86 DVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMR 145
Query: 237 TTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIE 296
PD +T +++ + + SL+ +H I G+ V + Y KCG ++
Sbjct: 146 LNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLD 205
Query: 297 QALQIFFKAQVKD--IYCWNAIISGLALHGHGYAALKLFGYM 336
A +F D + WN++ ++ G + A L+ M
Sbjct: 206 SAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLM 247
>AT1G14470.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:4954080-4955702 FORWARD
Length = 540
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 88/290 (30%), Positives = 151/290 (52%), Gaps = 41/290 (14%)
Query: 89 TALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAISLFH-MMPL--- 144
T +I + + +A K F+ MP K +V+WN+ML YA NG EDA+ LF+ M+ L
Sbjct: 202 TVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVR 261
Query: 145 KDLSSFNILISG-----------------------------------YSSCGEVLAARSI 169
+ +++ I+IS ++ C ++ +AR I
Sbjct: 262 PNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRI 321
Query: 170 FDKMAI-KDIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEA 228
F+++ +++V+WN+++S TR GDM A LF MP +N +SWN+++AG GQ + A
Sbjct: 322 FNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALA 381
Query: 229 VDLFDEM-KTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMD 287
++ F++M + PD +T SVLSAC H+ LE G I Y + + + +L+
Sbjct: 382 IEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIF 441
Query: 288 MYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMK 337
MYA+ G++ +A ++F + + +D+ +N + + A +G G L L MK
Sbjct: 442 MYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMK 491
Score = 139 bits (349), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 149/302 (49%), Gaps = 24/302 (7%)
Query: 45 GFRADNYTFPILLKAAGKNCASRIGFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADA 104
G D ++FP+++K+AG R G F K GF++ +V+ +++MY A
Sbjct: 101 GIMPDAFSFPVVIKSAG-----RFGILFQALVEKLGFFKDPYVRNVIMDMYVKHESVESA 155
Query: 105 CKMFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMPLKDLSSFNILISGYSSCGEVL 164
K+F+ + + WN M+ Y G E+A LF MMP D+ S+ ++I+G++ ++
Sbjct: 156 RKVFDQISQRKGSDWNVMISGYWKWGNKEEACKLFDMMPENDVVSWTVMITGFAKVKDLE 215
Query: 165 AARSIFDKMAIKDIVSWNSILSACTRAGDMEKAFALFQEM----PMKNTISWNTMLAGCL 220
AR FD+M K +VSWN++LS + G E A LF +M N +W +++ C
Sbjct: 216 NARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACS 275
Query: 221 QRGQFS---EAVDLFDEMKTT-NCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLA 276
R S V L DE + NC T++L A +++ + I++ L
Sbjct: 276 FRADPSLTRSLVKLIDEKRVRLNC----FVKTALLDMHAKCRDIQSARR-----IFNELG 326
Query: 277 SSPHVTT--ALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFG 334
+ ++ T A++ Y + G + A Q+F +++ WN++I+G A +G A++ F
Sbjct: 327 TQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFE 386
Query: 335 YM 336
M
Sbjct: 387 DM 388
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 136/302 (45%), Gaps = 49/302 (16%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
MP V WN ++ + G E A+ + +M G R + T+ I++ A C+ R
Sbjct: 224 MPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISA----CSFRAD 279
Query: 70 FAFHGQTIKTGFYRHI----FVQTALINMYGTLHCTADACKMFENMPV-KDLVAWNSMLD 124
+ +K + + FV+TAL++M+ A ++F + ++LV WN+M+
Sbjct: 280 PSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMIS 339
Query: 125 AYASNGEMEDAISLFHMMPLKDLSSFNILISGYSSCGEVLAARSIFDKM-----AIKDIV 179
Y G+M A LF MP +++ S+N LI+GY+ G+ A F+ M + D V
Sbjct: 340 GYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEV 399
Query: 180 SWNSILSAC-----------------------------------TRAGDMEKAFALFQEM 204
+ S+LSAC R G++ +A +F EM
Sbjct: 400 TMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEM 459
Query: 205 PMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGI 264
++ +S+NT+ G E ++L +MK PD +T TSVL+AC G L+ G
Sbjct: 460 KERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQ 519
Query: 265 KI 266
+I
Sbjct: 520 RI 521
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 67/160 (41%), Gaps = 7/160 (4%)
Query: 181 WNS-ILSACTR-AGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTT 238
W S I+S CTR +F + N N+M + ++ + L+++
Sbjct: 41 WASRIISCCTRLRAPSYYTRLIFDSVTFPNVFVVNSMFKYFSKMDMANDVLRLYEQRSRC 100
Query: 239 NCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQA 298
+PD + V+ + G L + + G P+V +MDMY K S+E A
Sbjct: 101 GIMPDAFSFPVVIKSAGRFGILFQALVEKL-----GFFKDPYVRNVIMDMYVKHESVESA 155
Query: 299 LQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMKK 338
++F + + WN +ISG G+ A KLF M +
Sbjct: 156 RKVFDQISQRKGSDWNVMISGYWKWGNKEEACKLFDMMPE 195
>AT3G63370.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:23402080-23405991 FORWARD
Length = 1017
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 166/334 (49%), Gaps = 10/334 (2%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
MP WN +I ++ G A+ Y NM+V G +FP LLKA K R G
Sbjct: 105 MPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSG 164
Query: 70 FAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVK-DLVAWNSMLDAYAS 128
H +K G++ F+ AL++MY + A ++F+ K D V WNS+L +Y++
Sbjct: 165 SELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYST 224
Query: 129 NGEMEDAISLFHMMPLKDLS--SFNILIS-------GYSSCGEVLAARSIFDKMAIKDIV 179
+G+ + + LF M + + S+ I+ + Y+ G+ + A + ++
Sbjct: 225 SGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELY 284
Query: 180 SWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTN 239
N++++ TR G M +A + ++M + ++WN+++ G +Q + EA++ F +M
Sbjct: 285 VCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAG 344
Query: 240 CLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQAL 299
D ++ TS+++A L +L G+++H Y I G S+ V L+DMY+KC
Sbjct: 345 HKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMG 404
Query: 300 QIFFKAQVKDIYCWNAIISGLALHGHGYAALKLF 333
+ F + KD+ W +I+G A + AL+LF
Sbjct: 405 RAFLRMHDKDLISWTTVIAGYAQNDCHVEALELF 438
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/341 (26%), Positives = 164/341 (48%), Gaps = 19/341 (5%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
M + +V WN +IK ++ ++A+ + +M G ++D + ++ A+G+ G
Sbjct: 309 MNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAG 368
Query: 70 FAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASN 129
H IK G+ ++ V LI+MY + T + F M KDL++W +++ YA N
Sbjct: 369 MELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQN 428
Query: 130 GEMEDAISLFHMMPLKDLSSFNILISGYSSCGEVLAARSIFDKMAIK------------- 176
+A+ LF + K + +++ G +L A S+ M I
Sbjct: 429 DCHVEALELFRDVAKKRMEIDEMIL------GSILRASSVLKSMLIVKEIHCHILRKGLL 482
Query: 177 DIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMK 236
D V N ++ + +M A +F+ + K+ +SW +M++ G SEAV+LF M
Sbjct: 483 DTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMV 542
Query: 237 TTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIE 296
T D + +LSA A L +L G +IH Y + G + A++DMYA CG ++
Sbjct: 543 ETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQ 602
Query: 297 QALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMK 337
A +F + + K + + ++I+ +HG G AA++LF M+
Sbjct: 603 SAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMR 643
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 121/244 (49%), Gaps = 16/244 (6%)
Query: 106 KMFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMPLKD----LSSFNILISGYSSCG 161
K+F+ MP + AWN+M+ AY SNGE A++L+ M ++ LSSF L+ +C
Sbjct: 100 KVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLK---ACA 156
Query: 162 EVLAARSIFDKMAIKDIVSW-------NSILSACTRAGDMEKAFALFQEMPMK-NTISWN 213
++ RS + ++ + + N+++S + D+ A LF K + + WN
Sbjct: 157 KLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWN 216
Query: 214 TMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYS 273
++L+ G+ E ++LF EM T P+ T S L+AC + G +IH + S
Sbjct: 217 SILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKS 276
Query: 274 GLASSP-HVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKL 332
SS +V AL+ MY +CG + QA +I + D+ WN++I G + AL+
Sbjct: 277 STHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEF 336
Query: 333 FGYM 336
F M
Sbjct: 337 FSDM 340
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 115/242 (47%), Gaps = 18/242 (7%)
Query: 72 FHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGE 131
H ++ G + +Q L+++YG A ++FE++ KD+V+W SM+ + A NG
Sbjct: 472 IHCHILRKGLLDTV-IQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGN 530
Query: 132 MEDAISLFHMMPLKDLSSFNI----LISGYSSCGEVLAARSIFDKMAIKDIVSWNSILSA 187
+A+ LF M LS+ ++ ++S +S + R I + K SI A
Sbjct: 531 ESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVA 590
Query: 188 CTR----AGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPD 243
GD++ A A+F + K + + +M+ G AV+LFD+M+ N PD
Sbjct: 591 VVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPD 650
Query: 244 YLTATSVLSACAHLGSLETG---IKI--HVYAIYSGLASSPHVTTALMDMYAKCGSIEQA 298
+++ ++L AC+H G L+ G +KI H Y L P L+DM + + +A
Sbjct: 651 HISFLALLYACSHAGLLDEGRGFLKIMEHEYE----LEPWPEHYVCLVDMLGRANCVVEA 706
Query: 299 LQ 300
+
Sbjct: 707 FE 708
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 76/156 (48%), Gaps = 6/156 (3%)
Query: 184 ILSAC--TRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCL 241
+L C RA EK +F EMP + +WNTM+ + G+ + A+ L+ M+
Sbjct: 86 VLELCGKRRAVSQEK---VFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVP 142
Query: 242 PDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQI 301
+ ++L ACA L + +G ++H + G S+ + AL+ MYAK + A ++
Sbjct: 143 LGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRL 202
Query: 302 FFKAQVK-DIYCWNAIISGLALHGHGYAALKLFGYM 336
F Q K D WN+I+S + G L+LF M
Sbjct: 203 FDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREM 238
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 92/216 (42%), Gaps = 10/216 (4%)
Query: 14 EVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFH 73
+V W +I L GN +AV + M G AD+ +L AA A G H
Sbjct: 514 DVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIH 573
Query: 74 GQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEME 133
++ GF + A+++MY A +F+ + K L+ + SM++AY +G +
Sbjct: 574 CYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGK 633
Query: 134 DAISLFHMMPLKDLS----SFNILISGYSSCGEVLAARSIFDKMAIK-DIVSWNS----I 184
A+ LF M +++S SF L+ S G + R M + ++ W +
Sbjct: 634 AAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCL 693
Query: 185 LSACTRAGDMEKAFALFQEMPMKNTIS-WNTMLAGC 219
+ RA + +AF + M + T W +LA C
Sbjct: 694 VDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAAC 729
>AT1G20230.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:7009570-7011852 FORWARD
Length = 760
Score = 147 bits (370), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 97/379 (25%), Positives = 170/379 (44%), Gaps = 78/379 (20%)
Query: 33 QAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTIKTGFYRHIFVQTALI 92
Q++ + M HG D++ P L K + A ++G H + +G FVQ ++
Sbjct: 99 QSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMF 158
Query: 93 NMYGTLHCTADACKMFENMPVKD-----------------------------------LV 117
+MY DA K+F+ M KD +V
Sbjct: 159 HMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIV 218
Query: 118 AWNSMLDAYASNGEMEDAISLFH----------------MMP------------------ 143
+WN +L + +G ++A+ +F ++P
Sbjct: 219 SWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYV 278
Query: 144 -----LKDLSSFNILISGYSSCGEVLAARSIFDKMAIKDIVSWNSILSACTRAGDMEKA- 197
LKD + +I Y G V S+F++ + + N+ ++ +R G ++KA
Sbjct: 279 IKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKAL 338
Query: 198 --FALFQEMPMK-NTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSAC 254
F LF+E M+ N +SW +++AGC Q G+ EA++LF EM+ P+++T S+L AC
Sbjct: 339 EMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPAC 398
Query: 255 AHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWN 314
++ +L G H +A+ L + HV +AL+DMYAKCG I + +F K++ CWN
Sbjct: 399 GNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWN 458
Query: 315 AIISGLALHGHGYAALKLF 333
++++G ++HG + +F
Sbjct: 459 SLMNGFSMHGKAKEVMSIF 477
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 144/309 (46%), Gaps = 43/309 (13%)
Query: 73 HGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEM 132
H + +K+G ++ LI Y +C DA + +++P + +++S++ A
Sbjct: 38 HARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLF 97
Query: 133 EDAISLF------------HMMP-----LKDLSSFNI--------LISG----------- 156
+I +F H++P +LS+F + +SG
Sbjct: 98 TQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSM 157
Query: 157 ---YSSCGEVLAARSIFDKMAIKDIVSWNSILSACTRAGDMEKAFALFQEMPMK----NT 209
Y CG + AR +FD+M+ KD+V+ +++L A R G +E+ + EM N
Sbjct: 158 FHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANI 217
Query: 210 ISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVY 269
+SWN +L+G + G EAV +F ++ PD +T +SVL + L G IH Y
Sbjct: 218 VSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGY 277
Query: 270 AIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAA 329
I GL V +A++DMY K G + + +F + ++ + NA I+GL+ +G A
Sbjct: 278 VIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKA 337
Query: 330 LKLFGYMKK 338
L++F K+
Sbjct: 338 LEMFELFKE 346
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 78/365 (21%), Positives = 155/365 (42%), Gaps = 49/365 (13%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTI 77
WN I+ G ++AV+ + + GF D T +L + G + +G HG I
Sbjct: 220 WNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVI 279
Query: 78 KTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAIS 137
K G + V +A+I+MYG +F + + N+ + + NG ++ A+
Sbjct: 280 KQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALE 339
Query: 138 LFHMMPLKDLS----SFNILISGYSSCGEVLAARSIFDKMAIKDI----VSWNSILSAC- 188
+F + + + S+ +I+G + G+ + A +F +M + + V+ S+L AC
Sbjct: 340 MFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACG 399
Query: 189 ----------------------------------TRAGDMEKAFALFQEMPMKNTISWNT 214
+ G + + +F MP KN + WN+
Sbjct: 400 NIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNS 459
Query: 215 MLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIK-IHVYAIYS 273
++ G G+ E + +F+ + T PD+++ TS+LSAC +G + G K + +
Sbjct: 460 LMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEY 519
Query: 274 GLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYC-WNAIISGLALHGH----GYA 328
G+ + ++++ + G +++A + + + C W A+++ L + A
Sbjct: 520 GIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIA 579
Query: 329 ALKLF 333
A KLF
Sbjct: 580 AEKLF 584
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 109/218 (50%), Gaps = 10/218 (4%)
Query: 12 SLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFA 71
L V W II G +A+ + MQV G + ++ T P +L A G A G +
Sbjct: 350 ELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRS 409
Query: 72 FHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGE 131
HG ++ ++ V +ALI+MY + +F MP K+LV WNS+++ ++ +G+
Sbjct: 410 THGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGK 469
Query: 132 MEDAISLFH-MMPLKDLSSFNILISGYSSCGEVLAA-------RSIFDKMAIKDIVS-WN 182
++ +S+F +M + F S S+CG+V + + ++ IK + ++
Sbjct: 470 AKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYS 529
Query: 183 SILSACTRAGDMEKAFALFQEMPMK-NTISWNTMLAGC 219
+++ RAG +++A+ L +EMP + ++ W +L C
Sbjct: 530 CMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSC 567
>AT4G37380.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:17572040-17573938 REVERSE
Length = 632
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 97/309 (31%), Positives = 144/309 (46%), Gaps = 65/309 (21%)
Query: 29 GNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTIKTGFYRHIFVQ 88
G +QA L YV + + +TF LLK+ C+++ G H +K G +V
Sbjct: 109 GLKDQAFLLYVQLLSSEINPNEFTFSSLLKS----CSTKSGKLIHTHVLKFGLGIDPYVA 164
Query: 89 TALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMPLKDLS 148
T L+ D YA G++ A +F MP + L
Sbjct: 165 TGLV-------------------------------DVYAKGGDVVSAQKVFDRMPERSLV 193
Query: 149 SFNILISGYSSCGEVLAARSIFDKMAIKDIVSWNSILSACTRAGDMEKAFALFQEMPMKN 208
S +I+ Y+ G V AAR++FD M +DIVSWN ++ + G A LFQ++
Sbjct: 194 SSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKL---- 249
Query: 209 TISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHV 268
L G+ PD +T + LSAC+ +G+LETG IHV
Sbjct: 250 -----------LAEGKPK---------------PDEITVVAALSACSQIGALETGRWIHV 283
Query: 269 YAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYA 328
+ S + + V T L+DMY+KCGS+E+A+ +F KDI WNA+I+G A+HG+
Sbjct: 284 FVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQD 343
Query: 329 ALKLFGYMK 337
AL+LF M+
Sbjct: 344 ALRLFNEMQ 352
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 108/235 (45%), Gaps = 34/235 (14%)
Query: 14 EVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGF-RADNYTFPILLKAAGKNCASRIGFAF 72
++ WN +I + G A++ + + G + D T L A S+IG
Sbjct: 222 DIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSAC-----SQIG--- 273
Query: 73 HGQTIKTGFYRHIFVQ-----------TALINMYGTLHCTADACKMFENMPVKDLVAWNS 121
++TG + H+FV+ T LI+MY +A +F + P KD+VAWN+
Sbjct: 274 ---ALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNA 330
Query: 122 MLDAYASNGEMEDAISLFH-MMPLKDLSSFNI-LISGYSSC---GEVLAARSIFDKMAIK 176
M+ YA +G +DA+ LF+ M + L +I I +C G V IF+ M +
Sbjct: 331 MIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQE 390
Query: 177 -----DIVSWNSILSACTRAGDMEKAFALFQEMPMK-NTISWNTMLAGCLQRGQF 225
I + ++S RAG +++A+ + M M +++ W+++L C G F
Sbjct: 391 YGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDF 445
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 70/145 (48%), Gaps = 4/145 (2%)
Query: 192 GDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVL 251
G + + ALF + + + + G +A L+ ++ ++ P+ T +S+L
Sbjct: 78 GKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLL 137
Query: 252 SACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIY 311
+C S ++G IH + + GL P+V T L+D+YAK G + A ++F + + +
Sbjct: 138 KSC----STKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLV 193
Query: 312 CWNAIISGLALHGHGYAALKLFGYM 336
A+I+ A G+ AA LF M
Sbjct: 194 SSTAMITCYAKQGNVEAARALFDSM 218
>AT2G40720.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:16987269-16989851 FORWARD
Length = 860
Score = 146 bits (368), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 96/337 (28%), Positives = 166/337 (49%), Gaps = 22/337 (6%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTI 77
WN ++ + A+ + M+ D++T ++ +C S +G +G+++
Sbjct: 341 WNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVI-----SCCSVLGLYNYGKSV 395
Query: 78 KTGFYRHIF-----VQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEM 132
++ +++AL+ +Y C DA +F++M KD+VAW S++ NG+
Sbjct: 396 HAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKF 455
Query: 133 EDAISLFHMMPLKDLS---SFNILISGYSSCGEVLAAR-------SIFDKMAIKDIVSWN 182
++A+ +F M D S +I+ S ++C + A R S+ + ++ +
Sbjct: 456 KEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGS 515
Query: 183 SILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSE-AVDLFDEMKTTNCL 241
S++ ++ G E A +F M +N ++WN+M++ C R E ++DLF+ M +
Sbjct: 516 SLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMIS-CYSRNNLPELSIDLFNLMLSQGIF 574
Query: 242 PDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQI 301
PD ++ TSVL A + SL G +H Y + G+ S H+ AL+DMY KCG + A I
Sbjct: 575 PDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENI 634
Query: 302 FFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMKK 338
F K Q K + WN +I G HG AL LF MKK
Sbjct: 635 FKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKK 671
Score = 125 bits (314), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 158/337 (46%), Gaps = 15/337 (4%)
Query: 14 EVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGK--NCASRIGFA 71
+V WN +I + ++ V + M V G R D ++ I++ K N G
Sbjct: 132 DVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQ 191
Query: 72 FHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVK-DLVAWNSMLDAYASNG 130
HG ++ F++TALI+MY + DA ++F + K ++V WN M+ + +G
Sbjct: 192 IHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSG 251
Query: 131 EMEDAISLFHMMPLKDLSSFNILISG-YSSCGEVLAARSIFDKMAIKDIVSW-------- 181
E ++ L+ + + + +G +C + + S F + D+V
Sbjct: 252 ICESSLDLYMLAKNNSVKLVSTSFTGALGACSQ--SENSGFGRQIHCDVVKMGLHNDPYV 309
Query: 182 -NSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNC 240
S+LS ++ G + +A +F + K WN M+A + A+DLF M+ +
Sbjct: 310 CTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSV 369
Query: 241 LPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQ 300
LPD T ++V+S C+ LG G +H + S+ + +AL+ +Y+KCG A
Sbjct: 370 LPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYL 429
Query: 301 IFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMK 337
+F + KD+ W ++ISGL +G ALK+FG MK
Sbjct: 430 VFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMK 466
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 90/327 (27%), Positives = 152/327 (46%), Gaps = 14/327 (4%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVH--GFRADNYTFPILLKAAGKNCASR 67
M ++ W +I G ++A+ + +M+ + D+ + A A R
Sbjct: 434 MEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALR 493
Query: 68 IGFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYA 127
G HG IKTG ++FV ++LI++Y A K+F +M +++VAWNSM+ Y+
Sbjct: 494 FGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYS 553
Query: 128 SNGEMEDAISLFHMM----PLKDLSSFNILISGYSSCGEVLAARSIFD---KMAI-KDIV 179
N E +I LF++M D S ++ SS +L +S+ ++ I D
Sbjct: 554 RNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTH 613
Query: 180 SWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTN 239
N+++ + G + A +F++M K+ I+WN M+ G G A+ LFDEMK
Sbjct: 614 LKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAG 673
Query: 240 CLPDYLTATSVLSACAHLGSLETGIKIHVYAIYS-GLASSPHVTTALMDMYAKCGSIEQA 298
PD +T S++SAC H G +E G I + G+ + ++D+ + G +E+A
Sbjct: 674 ESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEA 733
Query: 299 LQIFFKAQV--KDIYCWNAIISGLALH 323
F KA D W ++S H
Sbjct: 734 YS-FIKAMPIEADSSIWLCLLSASRTH 759
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 143/307 (46%), Gaps = 20/307 (6%)
Query: 51 YTFPILLKAAGKNCASRIGFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFEN 110
+TFP LLKA G HG + G+ F+ T+L+NMY A ++F+
Sbjct: 61 FTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDG 120
Query: 111 -------MPVKDLVAWNSMLDAYASNGEMEDAISLFHMMPL----KDLSSFNILISGYSS 159
+ +D+ WNSM+D Y ++ + F M + D S +I++S
Sbjct: 121 WSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCK 180
Query: 160 CGEVL--AARSIFDKMAIKDIVSWNSILSACT-----RAGDMEKAFALFQEMPMK-NTIS 211
G + I M +++ + +S L + G A+ +F E+ K N +
Sbjct: 181 EGNFRREEGKQIHGFM-LRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVL 239
Query: 212 WNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAI 271
WN M+ G G ++DL+ K + + T L AC+ + G +IH +
Sbjct: 240 WNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVV 299
Query: 272 YSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALK 331
GL + P+V T+L+ MY+KCG + +A +F K + WNA+++ A + +GY+AL
Sbjct: 300 KMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALD 359
Query: 332 LFGYMKK 338
LFG+M++
Sbjct: 360 LFGFMRQ 366
>AT3G09040.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:2761195-2764281 REVERSE
Length = 1028
Score = 146 bits (368), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 153/321 (47%), Gaps = 14/321 (4%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
M S +V WN +I H G A+ + NM+ ++ T +L A G +G
Sbjct: 287 MSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLG 346
Query: 70 FAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASN 129
H + IK G +I+V ++L++MY A K+FE + K+ V WN+M+ YA N
Sbjct: 347 LVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHN 406
Query: 130 GEMEDAISLFHMMPLKDLSSFNILISGYSSCGEVLAARS-----------IFDKMAIKDI 178
GE + LF M +K S +NI ++S AA I K K++
Sbjct: 407 GESHKVMELF--MDMKS-SGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNL 463
Query: 179 VSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTT 238
N+++ + G +E A +F+ M ++ ++WNT++ +Q SEA DLF M
Sbjct: 464 FVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLC 523
Query: 239 NCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQA 298
+ D S L AC H+ L G ++H ++ GL H ++L+DMY+KCG I+ A
Sbjct: 524 GIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDA 583
Query: 299 LQIFFKAQVKDIYCWNAIISG 319
++F + NA+I+G
Sbjct: 584 RKVFSSLPEWSVVSMNALIAG 604
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 157/324 (48%), Gaps = 27/324 (8%)
Query: 14 EVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFH 73
+V WN ++ + +G + + ++V++ + + +TF I+L + G H
Sbjct: 124 DVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIH 183
Query: 74 GQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEME 133
IK G R+ + AL++MY +DA ++FE + + V W + Y G E
Sbjct: 184 CSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPE 243
Query: 134 DAISLFHMMPLKDLSSFNILISGYSSCGEVLAARSIFDKMAIKDIVSWNSILSACTRAGD 193
+A+ +F M D+ D +++ ++++ R G
Sbjct: 244 EAVLVFERMR---------------------------DEGHRPDHLAFVTVINTYIRLGK 276
Query: 194 MEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSA 253
++ A LF EM + ++WN M++G +RG + A++ F M+ ++ T SVLSA
Sbjct: 277 LKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSA 336
Query: 254 CAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCW 313
+ +L+ G+ +H AI GLAS+ +V ++L+ MY+KC +E A ++F + K+ W
Sbjct: 337 IGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFW 396
Query: 314 NAIISGLALHGHGYAALKLFGYMK 337
NA+I G A +G + ++LF MK
Sbjct: 397 NAMIRGYAHNGESHKVMELFMDMK 420
Score = 128 bits (322), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 94/332 (28%), Positives = 158/332 (47%), Gaps = 12/332 (3%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTI 77
WN II ++ N +A + M + G +D LKA G H ++
Sbjct: 497 WNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSV 556
Query: 78 KTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAIS 137
K G R + ++LI+MY DA K+F ++P +V+ N+++ Y+ N +E+A+
Sbjct: 557 KCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNN-LEEAVV 615
Query: 138 LFHMMPLKDLSSFNILISG-YSSC--GEVLAARSIFDKMAIKDIVSWN------SILSAC 188
LF M + ++ I + +C E L + F K S S+L
Sbjct: 616 LFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMY 675
Query: 189 TRAGDMEKAFALFQEMPM-KNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTA 247
+ M +A ALF E+ K+ + W M++G Q G + EA+ + EM+ LPD T
Sbjct: 676 MNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATF 735
Query: 248 TSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQV 307
+VL C+ L SL G IH + + L+DMYAKCG ++ + Q+F + +
Sbjct: 736 VTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRR 795
Query: 308 K-DIYCWNAIISGLALHGHGYAALKLFGYMKK 338
+ ++ WN++I+G A +G+ ALK+F M++
Sbjct: 796 RSNVVSWNSLINGYAKNGYAEDALKIFDSMRQ 827
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 155/310 (50%), Gaps = 17/310 (5%)
Query: 30 NAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTIKTGFYRH-IFVQ 88
N E+AV+ + M G TF +++A K + +G FHGQ K GF ++
Sbjct: 609 NLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLG 668
Query: 89 TALINMYGTLHCTADACKMFENMPV-KDLVAWNSMLDAYASNGEMEDAISLFHMMP---- 143
+L+ MY +AC +F + K +V W M+ ++ NG E+A+ + M
Sbjct: 669 ISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGV 728
Query: 144 LKDLSSFNILI---SGYSSCGEVLAARSIFDKMAIK-DIVSWNSILSACTRAGDMEKAFA 199
L D ++F ++ S SS E A S+ +A D ++ N+++ + GDM+ +
Sbjct: 729 LPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQ 788
Query: 200 LFQEMPMK-NTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLG 258
+F EM + N +SWN+++ G + G +A+ +FD M+ ++ +PD +T VL+AC+H G
Sbjct: 789 VFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAG 848
Query: 259 SLETGIKIHVYAI--YSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQ--VKDIYCWN 314
+ G KI I Y A HV ++D+ + G +++A F +AQ D W+
Sbjct: 849 KVSDGRKIFEMMIGQYGIEARVDHV-ACMVDLLGRWGYLQEA-DDFIEAQNLKPDARLWS 906
Query: 315 AIISGLALHG 324
+++ +HG
Sbjct: 907 SLLGACRIHG 916
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 119/286 (41%), Gaps = 52/286 (18%)
Query: 65 ASRIGFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLD 124
A RIG A H +++ G + A++++Y + A K F+ + KD+ AWNSML
Sbjct: 75 ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLE-KDVTAWNSMLS 133
Query: 125 AYASNGE----MEDAISLFHMMPLKDLSSFNILISGYSSCGEVLAARSIFDKMAIKDIVS 180
Y+S G+ + +SLF + +F+I++S + V R I M IK +
Sbjct: 134 MYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSM-IKMGLE 192
Query: 181 WNS--------ILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLF 232
NS + + C R D + F + NT+ W + +G ++ G EAV +F
Sbjct: 193 RNSYCGGALVDMYAKCDRISDARRVFEWIVD---PNTVCWTCLFSGYVKAGLPEEAVLVF 249
Query: 233 DEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKC 292
+ M+ PD+L +V++ Y +
Sbjct: 250 ERMRDEGHRPDHLAFVTVINT-----------------------------------YIRL 274
Query: 293 GSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMKK 338
G ++ A +F + D+ WN +ISG G A++ F M+K
Sbjct: 275 GKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRK 320
>AT1G69350.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:26069882-26072245 FORWARD
Length = 787
Score = 145 bits (367), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 159/297 (53%), Gaps = 12/297 (4%)
Query: 51 YTFPILLKA-AGKNCASRIGFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFE 109
+ FP +L+A AG +G HG+ IK G ++T+L+ MYG +DA K+F+
Sbjct: 101 FVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFD 160
Query: 110 NMPVKDLVAWNSMLDAYASNGEMEDAISLFHMM----PLKDLSSFNILISGYSSCGEVLA 165
MPV+DLVAW++++ + NGE+ A+ +F M D + ++ G + G +
Sbjct: 161 GMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRI 220
Query: 166 ARSIFDKMAIK----DIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQ 221
ARS+ ++ K D NS+L+ ++ GD+ + +F+++ KN +SW M++
Sbjct: 221 ARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISS-YN 279
Query: 222 RGQFSE-AVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASS-P 279
RG+FSE A+ F EM + P+ +T SVLS+C +G + G +H +A+ L +
Sbjct: 280 RGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYE 339
Query: 280 HVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYM 336
++ AL+++YA+CG + + ++I WN++IS A G AL LF M
Sbjct: 340 SLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQM 396
Score = 118 bits (295), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 155/339 (45%), Gaps = 16/339 (4%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
MP ++ W+ ++ + G +A+ + M G D T +++ + RI
Sbjct: 162 MPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIA 221
Query: 70 FAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASN 129
+ HGQ + F + +L+ MY + ++FE + K+ V+W +M+ +Y
Sbjct: 222 RSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRG 281
Query: 130 GEMEDAISLFHMMPLKDLS-SFNILISGYSSCGEV-----------LAARSIFDKMAIKD 177
E A+ F M + + L S SSCG + A R D
Sbjct: 282 EFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESL 341
Query: 178 IVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKT 237
++ + + C + D E + + +N ++WN++++ RG +A+ LF +M T
Sbjct: 342 SLALVELYAECGKLSDCETVLRVVSD---RNIVAWNSLISLYAHRGMVIQALGLFRQMVT 398
Query: 238 TNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQ 297
PD T S +SAC + G + G +IH + I + + S V +L+DMY+K GS++
Sbjct: 399 QRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDV-SDEFVQNSLIDMYSKSGSVDS 457
Query: 298 ALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYM 336
A +F + + + + WN+++ G + +G+ A+ LF YM
Sbjct: 458 ASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYM 496
Score = 114 bits (286), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 159/328 (48%), Gaps = 11/328 (3%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTI 77
W +I + +E+A+ ++ M G + T +L + G R G + HG +
Sbjct: 271 WTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAV 330
Query: 78 KTGF-YRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAI 136
+ + + AL+ +Y +D + + +++VAWNS++ YA G + A+
Sbjct: 331 RRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQAL 390
Query: 137 SLFHMMPLKDL--SSFNILISGYSSC---GEVLAARSIFD---KMAIKDIVSWNSILSAC 188
LF M + + +F L S S+C G V + I + + D NS++
Sbjct: 391 GLFRQMVTQRIKPDAFT-LASSISACENAGLVPLGKQIHGHVIRTDVSDEFVQNSLIDMY 449
Query: 189 TRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTAT 248
+++G ++ A +F ++ ++ ++WN+ML G Q G EA+ LFD M + + +T
Sbjct: 450 SKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFL 509
Query: 249 SVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVK 308
+V+ AC+ +GSLE G +H I SGL TAL+DMYAKCG + A +F +
Sbjct: 510 AVIQACSSIGSLEKGKWVHHKLIISGL-KDLFTDTALIDMYAKCGDLNAAETVFRAMSSR 568
Query: 309 DIYCWNAIISGLALHGHGYAALKLFGYM 336
I W+++I+ +HG +A+ F M
Sbjct: 569 SIVSWSSMINAYGMHGRIGSAISTFNQM 596
Score = 104 bits (260), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 147/316 (46%), Gaps = 13/316 (4%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTI 77
WN +I + G QA+ + M + D +T + A +G HG I
Sbjct: 373 WNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVI 432
Query: 78 KTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAIS 137
+T FVQ +LI+MY A +F + + +V WNSML ++ NG +AIS
Sbjct: 433 RTDVSDE-FVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAIS 491
Query: 138 LFHMMPLKDLS----SFNILISGYSSCGEVLAARSIFDKMAI---KDIVSWNSILSACTR 190
LF M L +F +I SS G + + + K+ I KD+ + +++ +
Sbjct: 492 LFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLKDLFTDTALIDMYAK 551
Query: 191 AGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSV 250
GD+ A +F+ M ++ +SW++M+ G+ A+ F++M + P+ + +V
Sbjct: 552 CGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNV 611
Query: 251 LSACAHLGSLETGIKIHVYAIYSGLASSPHVT--TALMDMYAKCGSIEQALQIFFKAQ-V 307
LSAC H GS+E G + + + SP+ +D+ ++ G +++A + + +
Sbjct: 612 LSACGHSGSVEEG--KYYFNLMKSFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFL 669
Query: 308 KDIYCWNAIISGLALH 323
D W ++++G +H
Sbjct: 670 ADASVWGSLVNGCRIH 685
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 125/289 (43%), Gaps = 13/289 (4%)
Query: 62 KNCAS-RIGFAFHGQTIKTG-FYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAW 119
++C+S R+ H + TG R T LI Y + + +FE P D +
Sbjct: 9 RSCSSLRLVSQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMY 68
Query: 120 NSMLDAYASNGEMEDAISLFHMM--PLKDLSSFNILISGYSSCGEVLAARSIFDKMAIK- 176
++ ++ AI L+H + +S F + S +C S+ K+ +
Sbjct: 69 GVLIKCNVWCHLLDAAIDLYHRLVSETTQISKF-VFPSVLRACAGSREHLSVGGKVHGRI 127
Query: 177 -------DIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAV 229
D V S+L + G++ A +F MP+++ ++W+T+++ CL+ G+ +A+
Sbjct: 128 IKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKAL 187
Query: 230 DLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMY 289
+F M PD +T SV+ CA LG L +H + +L+ MY
Sbjct: 188 RMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMY 247
Query: 290 AKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMKK 338
+KCG + + +IF K K+ W A+IS AL+ F M K
Sbjct: 248 SKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIK 296
>AT5G52850.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:21414935-21417616 REVERSE
Length = 893
Score = 145 bits (366), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 172/331 (51%), Gaps = 13/331 (3%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTI 77
W ++ + A++AV T++ M+ G + +N+T+ +L + G H QTI
Sbjct: 293 WTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTI 352
Query: 78 KTGFYRHIFVQTALINMYGTLHCTA---DACKMFENMPVKDLVAWNSMLDAYASNGEMED 134
K GF V AL++MY + C+A +A ++F M ++V+W +++ +G ++D
Sbjct: 353 KVGFEDSTDVGNALVDMY--MKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQD 410
Query: 135 AISLFHMMPLKDLSSFNILISGY-SSCGEVLAARSIFD-------KMAIKDIVSWNSILS 186
L M +++ + +SG +C ++ R + + + ++V NS++
Sbjct: 411 CFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVD 470
Query: 187 ACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLT 246
A + ++ A+ + + M ++ I++ +++ + G+ A+ + + M D L+
Sbjct: 471 AYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLS 530
Query: 247 ATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQ 306
+SA A+LG+LETG +H Y++ SG + + V +L+DMY+KCGS+E A ++F +
Sbjct: 531 LPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIA 590
Query: 307 VKDIYCWNAIISGLALHGHGYAALKLFGYMK 337
D+ WN ++SGLA +G +AL F M+
Sbjct: 591 TPDVVSWNGLVSGLASNGFISSALSAFEEMR 621
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 142/301 (47%), Gaps = 12/301 (3%)
Query: 34 AVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTIKTGFYRHIFVQTALIN 93
A+ + M G + +TF ++++ G HG IKTGF + V ++L +
Sbjct: 108 ALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSD 167
Query: 94 MYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMM-----PLKDLS 148
+Y +AC++F ++ D ++W M+ + + +A+ + M P + +
Sbjct: 168 LYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFT 227
Query: 149 SFNILISGYSSCGEVLAARSIFDKMAIK----DIVSWNSILSACTRAGDMEKAFALFQEM 204
+L G SS + ++I + ++ ++V S++ ++ ME A +
Sbjct: 228 FVKLL--GASSFLGLEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSS 285
Query: 205 PMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGI 264
++ W ++++G ++ + EAV F EM++ P+ T +++LS C+ + SL+ G
Sbjct: 286 GEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGK 345
Query: 265 KIHVYAIYSGLASSPHVTTALMDMYAKCGSIE-QALQIFFKAQVKDIYCWNAIISGLALH 323
+IH I G S V AL+DMY KC + E +A ++F ++ W +I GL H
Sbjct: 346 QIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDH 405
Query: 324 G 324
G
Sbjct: 406 G 406
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 133/282 (47%), Gaps = 11/282 (3%)
Query: 65 ASRIGFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLD 124
+SRIG H IK G ++ + L+++Y +A K+F+ M + + AW M+
Sbjct: 38 SSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMIS 97
Query: 125 AYASNGEMEDAISLFHMMPLKDLS----SFNILISGYSSCGEVLAARSIFDKMAIKDIVS 180
A+ + E A+SLF M +F+ ++ + ++ + + IK
Sbjct: 98 AFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSV-IKTGFE 156
Query: 181 WNSILSAC-----TRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEM 235
NS++ + ++ G ++A LF + +TISW M++ + ++ EA+ + EM
Sbjct: 157 GNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEM 216
Query: 236 KTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSI 295
P+ T +L A + LG LE G IH I G+ + + T+L+D Y++ +
Sbjct: 217 VKAGVPPNEFTFVKLLGASSFLG-LEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKM 275
Query: 296 EQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMK 337
E A+++ + +D++ W +++SG + A+ F M+
Sbjct: 276 EDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMR 317
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 80/157 (50%)
Query: 182 NSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCL 241
N++LS + + A LF EM + +W M++ + +F+ A+ LF+EM +
Sbjct: 62 NNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTH 121
Query: 242 PDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQI 301
P+ T +SV+ +CA L + G ++H I +G + V ++L D+Y+KCG ++A ++
Sbjct: 122 PNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACEL 181
Query: 302 FFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMKK 338
F Q D W +IS L AL+ + M K
Sbjct: 182 FSSLQNADTISWTMMISSLVGARKWREALQFYSEMVK 218
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 104/227 (45%), Gaps = 17/227 (7%)
Query: 15 VRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHG 74
V R+NE+ K M + +V+ Y M G R D + P + A+ A G H
Sbjct: 500 VTRFNELGKHEMAL-----SVINY--MYGDGIRMDQLSLPGFISASANLGALETGKHLHC 552
Query: 75 QTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMED 134
++K+GF V +L++MY DA K+FE + D+V+WN ++ ASNG +
Sbjct: 553 YSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISS 612
Query: 135 AISLFHMMPLK----DLSSFNILISGYSSCGEVLAARSIFDKMAI-----KDIVSWNSIL 185
A+S F M +K D +F IL+S S+ F M + + ++
Sbjct: 613 ALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLV 672
Query: 186 SACTRAGDMEKAFALFQEMPMK-NTISWNTMLAGCLQRGQFSEAVDL 231
RAG +E+A + + M +K N + + T+L C RG S D+
Sbjct: 673 GILGRAGRLEEATGVVETMHLKPNAMIFKTLLRACRYRGNLSLGEDM 719
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 114/258 (44%), Gaps = 13/258 (5%)
Query: 52 TFPILLKAAGKNCASRIGFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENM 111
T +L+A K R H ++ + V +L++ Y + A + +M
Sbjct: 429 TLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSM 488
Query: 112 PVKDLVAWNSMLDAYASNGEMEDAISLFHMMPLKDLSSFNILISGYSSCGEVLAARSIFD 171
+D + + S++ + G+ E A+S+ + M + + + G+ S L A
Sbjct: 489 KRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGK 548
Query: 172 KMAIKDIVS--------WNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRG 223
+ + S NS++ ++ G +E A +F+E+ + +SWN +++G G
Sbjct: 549 HLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNG 608
Query: 224 QFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLAS-SPHVT 282
S A+ F+EM+ PD +T +LSAC++ G L T + + + + + + P V
Sbjct: 609 FISSALSAFEEMRMKETEPDSVTFLILLSACSN-GRL-TDLGLEYFQVMKKIYNIEPQVE 666
Query: 283 --TALMDMYAKCGSIEQA 298
L+ + + G +E+A
Sbjct: 667 HYVHLVGILGRAGRLEEA 684
>AT5G39350.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:15750929-15752962 FORWARD
Length = 677
Score = 145 bits (365), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 170/344 (49%), Gaps = 20/344 (5%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFR--ADNYTFPILLKAAGKNCASR 67
MP + +N +I+ ++ G A+ ++ M G + D YT+P + KAAG+ + +
Sbjct: 75 MPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMK 134
Query: 68 IGFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYA 127
+G HG+ +++ F R +VQ AL+ MY A +F+ M +D+++WN+M+ Y
Sbjct: 135 LGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYY 194
Query: 128 SNGEMEDAISLFHMMPLKDLS-SFNILISGYSSCG------------EVLAARSIFDKMA 174
NG M DA+ +F M + + ++S CG +++ + + DK+
Sbjct: 195 RNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIE 254
Query: 175 IKDIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDE 234
+K N++++ + G M++A +F M ++ I+W M+ G + G A++L
Sbjct: 255 VK-----NALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRL 309
Query: 235 MKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGS 294
M+ P+ +T S++S C + G +H +A+ + S + T+L+ MYAKC
Sbjct: 310 MQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKR 369
Query: 295 IEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMKK 338
++ ++F A W+AII+G + AL LF M++
Sbjct: 370 VDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRR 413
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 94/341 (27%), Positives = 161/341 (47%), Gaps = 12/341 (3%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
M + +V WN +I + G A++ + M D+ T +L G +G
Sbjct: 178 MKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMG 237
Query: 70 FAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASN 129
H + I V+ AL+NMY +A +F+ M +D++ W M++ Y +
Sbjct: 238 RNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTED 297
Query: 130 GEMEDAISLFHMMPLKDLSSFNILISG-YSSCGEVLAARS-------IFDKMAIKDIVSW 181
G++E+A+ L +M + + + I+ S CG+ L + DI+
Sbjct: 298 GDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIE 357
Query: 182 NSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCL 241
S++S + ++ F +F +T W+ ++AGC+Q S+A+ LF M+ +
Sbjct: 358 TSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVE 417
Query: 242 PDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQI 301
P+ T S+L A A L L + IH Y +G SS T L+ +Y+KCG++E A +I
Sbjct: 418 PNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKI 477
Query: 302 F----FKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMKK 338
F K + KD+ W A+ISG +HG G+ AL++F M +
Sbjct: 478 FNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVR 518
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 120/247 (48%), Gaps = 16/247 (6%)
Query: 104 ACKMFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMPLKDLSSFNILISGYS----- 158
A K+FE MP L+++N ++ Y G DAIS+F M + + + GY+
Sbjct: 68 ARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKC---VPDGYTYPFVA 124
Query: 159 -SCGEVLAAR-------SIFDKMAIKDIVSWNSILSACTRAGDMEKAFALFQEMPMKNTI 210
+ GE+ + + I +D N++L+ G +E A +F M ++ I
Sbjct: 125 KAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVI 184
Query: 211 SWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYA 270
SWNTM++G + G ++A+ +FD M + D+ T S+L C HL LE G +H
Sbjct: 185 SWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLV 244
Query: 271 IYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAAL 330
L V AL++MY KCG +++A +F + + +D+ W +I+G G AL
Sbjct: 245 EEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENAL 304
Query: 331 KLFGYMK 337
+L M+
Sbjct: 305 ELCRLMQ 311
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 147/330 (44%), Gaps = 18/330 (5%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
M +V W +I + G+ E A+ MQ G R + T L+ G G
Sbjct: 279 MERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDG 338
Query: 70 FAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADAC-KMFENMPVKDLVAWNSMLDAYAS 128
HG ++ Y I ++T+LI+MY D C ++F W++++
Sbjct: 339 KCLHGWAVRQQVYSDIIIETSLISMYAKCK-RVDLCFRVFSGASKYHTGPWSAIIAGCVQ 397
Query: 129 NGEMEDAISLFHMMPLKD----LSSFNILISGYSSCGEVLAARSIFDKMA----IKDIVS 180
N + DA+ LF M +D +++ N L+ Y++ ++ A +I + + + +
Sbjct: 398 NELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDA 457
Query: 181 WNSILSACTRAGDMEKAFALF----QEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMK 236
++ ++ G +E A +F ++ K+ + W +++G G A+ +F EM
Sbjct: 458 ATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMV 517
Query: 237 TTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAI--YSGLASSPHVTTALMDMYAKCGS 294
+ P+ +T TS L+AC+H G +E G+ + + + Y LA S H T ++D+ + G
Sbjct: 518 RSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHY-TCIVDLLGRAGR 576
Query: 295 IEQALQIFFKAQVKDI-YCWNAIISGLALH 323
+++A + + W A+++ H
Sbjct: 577 LDEAYNLITTIPFEPTSTVWGALLAACVTH 606
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 76/147 (51%), Gaps = 2/147 (1%)
Query: 192 GDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEM--KTTNCLPDYLTATS 249
G + A LF+EMP + +S+N ++ ++ G + +A+ +F M + C+PD T
Sbjct: 63 GHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPF 122
Query: 250 VLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKD 309
V A L S++ G+ +H + S +V AL+ MY G +E A +F + +D
Sbjct: 123 VAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRD 182
Query: 310 IYCWNAIISGLALHGHGYAALKLFGYM 336
+ WN +ISG +G+ AL +F +M
Sbjct: 183 VISWNTMISGYYRNGYMNDALMMFDWM 209
>AT2G27610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:11783927-11786533 REVERSE
Length = 868
Score = 145 bits (365), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 164/327 (50%), Gaps = 6/327 (1%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTI 77
WN +I + G +A+ + +M+++ R +F ++K R H +
Sbjct: 263 WNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVV 322
Query: 78 KTGFYRHIFVQTALINMYGTLHCTADACKMFENMP-VKDLVAWNSMLDAYASNGEMEDAI 136
K GF ++TAL+ Y DA ++F+ + V ++V+W +M+ + N E+A+
Sbjct: 323 KYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAV 382
Query: 137 SLFHMMPLKDLS----SFNILISGYSSCGEVLAARSIFDKMAIKDIVSWNSILSACTRAG 192
LF M K + +++++++ + + ++L A + G
Sbjct: 383 DLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLG 442
Query: 193 DMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLS 252
+E+A +F + K+ ++W+ MLAG Q G+ A+ +F E+ P+ T +S+L+
Sbjct: 443 KVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILN 502
Query: 253 ACAHL-GSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIY 311
CA S+ G + H +AI S L SS V++AL+ MYAK G+IE A ++F + + KD+
Sbjct: 503 VCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLV 562
Query: 312 CWNAIISGLALHGHGYAALKLFGYMKK 338
WN++ISG A HG AL +F MKK
Sbjct: 563 SWNSMISGYAQHGQAMKALDVFKEMKK 589
Score = 142 bits (359), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 98/338 (28%), Positives = 161/338 (47%), Gaps = 13/338 (3%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
M V W +I + ++ + ++ MQ G + +++TF L + G
Sbjct: 154 MKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRG 213
Query: 70 FAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASN 129
H +K G + I V +LIN+Y A +F+ VK +V WNSM+ YA+N
Sbjct: 214 LQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAAN 273
Query: 130 GEMEDAISLFHMMPLKDL----SSFNILISGYSSCGEVLAAR----SIFDKMAIKDIVSW 181
G +A+ +F+ M L + SSF +I ++ E+ S+ + D
Sbjct: 274 GLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIR 333
Query: 182 NSILSACTRAGDMEKAFALFQEMP-MKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNC 240
+++ A ++ M A LF+E+ + N +SW M++G LQ EAVDLF EMK
Sbjct: 334 TALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGV 393
Query: 241 LPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQ 300
P+ T + +L+A + E +H + + S V TAL+D Y K G +E+A +
Sbjct: 394 RPNEFTYSVILTALPVISPSE----VHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAK 449
Query: 301 IFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMKK 338
+F KDI W+A+++G A G AA+K+FG + K
Sbjct: 450 VFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTK 487
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 149/294 (50%), Gaps = 14/294 (4%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTI 77
W +I + E+AV + M+ G R + +T+ ++L A S + H Q +
Sbjct: 365 WTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEV----HAQVV 420
Query: 78 KTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAIS 137
KT + R V TAL++ Y L +A K+F + KD+VAW++ML YA GE E AI
Sbjct: 421 KTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIK 480
Query: 138 LFHMMPLKDLS----SFNILISGYSSCGEVLAARSIFDKMAIKDIVSWN-----SILSAC 188
+F + + +F+ +++ ++ + F AIK + + ++L+
Sbjct: 481 MFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMY 540
Query: 189 TRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTAT 248
+ G++E A +F+ K+ +SWN+M++G Q GQ +A+D+F EMK D +T
Sbjct: 541 AKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFI 600
Query: 249 SVLSACAHLGSLETGIK-IHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQI 301
V +AC H G +E G K + +A + + ++D+Y++ G +E+A+++
Sbjct: 601 GVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKV 654
Score = 121 bits (304), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 153/319 (47%), Gaps = 9/319 (2%)
Query: 29 GNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTIKTGFYRHIFVQ 88
G ++A ++N+ G D F +LK + C G H Q IK GF + V
Sbjct: 72 GRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVG 131
Query: 89 TALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMPLKDL- 147
T+L++ Y D K+F+ M +++V W +++ YA N ++ ++LF M +
Sbjct: 132 TSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQ 191
Query: 148 -SSFNI-----LISGYSSCGEVLAARSIFDKMAI-KDIVSWNSILSACTRAGDMEKAFAL 200
+SF +++ G L ++ K + K I NS+++ + G++ KA L
Sbjct: 192 PNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARIL 251
Query: 201 FQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSL 260
F + +K+ ++WN+M++G G EA+ +F M+ + SV+ CA+L L
Sbjct: 252 FDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKEL 311
Query: 261 ETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQ-VKDIYCWNAIISG 319
++H + G ++ TALM Y+KC ++ AL++F + V ++ W A+ISG
Sbjct: 312 RFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISG 371
Query: 320 LALHGHGYAALKLFGYMKK 338
+ A+ LF MK+
Sbjct: 372 FLQNDGKEEAVDLFSEMKR 390
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 129/253 (50%), Gaps = 10/253 (3%)
Query: 95 YGTLHCTA--DACKMFENMPVKDLVAWNSMLDAYASNGEMEDAISLF---HMMPLK-DLS 148
+GT+ + +A +F+ P +D ++ S+L ++ +G ++A LF H + ++ D S
Sbjct: 35 FGTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCS 94
Query: 149 SFNILISGYSSCGEVLAARSIFDKMA----IKDIVSWNSILSACTRAGDMEKAFALFQEM 204
F+ ++ ++ + L R + + + D+ S++ + + + +F EM
Sbjct: 95 IFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEM 154
Query: 205 PMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGI 264
+N ++W T+++G + E + LF M+ P+ T + L A G G+
Sbjct: 155 KERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGL 214
Query: 265 KIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHG 324
++H + +GL + V+ +L+++Y KCG++ +A +F K +VK + WN++ISG A +G
Sbjct: 215 QVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANG 274
Query: 325 HGYAALKLFGYMK 337
AL +F M+
Sbjct: 275 LDLEALGMFYSMR 287
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 99/213 (46%), Gaps = 11/213 (5%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKA-AGKNCASRIGFAFHGQT 76
W+ ++ + G E A+ + + G + + +TF +L A N + G FHG
Sbjct: 462 WSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFA 521
Query: 77 IKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAI 136
IK+ + V +AL+ MY A ++F+ KDLV+WNSM+ YA +G+ A+
Sbjct: 522 IKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKAL 581
Query: 137 SLFHMMPLKDLSSFNILISG-YSSC---GEVLAARSIFDKMAIKDIVSWNSILSAC---- 188
+F M + + + G +++C G V FD M ++ ++C
Sbjct: 582 DVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDL 641
Query: 189 -TRAGDMEKAFALFQEMPMK-NTISWNTMLAGC 219
+RAG +EKA + + MP + W T+LA C
Sbjct: 642 YSRAGQLEKAMKVIENMPNPAGSTIWRTILAAC 674
>AT3G49740.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:18447788-18450001 FORWARD
Length = 737
Score = 144 bits (364), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 90/313 (28%), Positives = 164/313 (52%), Gaps = 10/313 (3%)
Query: 32 EQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTIKTGFYRHIFVQTAL 91
++++L + M R + TF ++ + +CA+ +G HG IKTG+ ++ V A
Sbjct: 273 DESLLVFRKMLEASLRPTDLTFVSVMGSC--SCAA-MGHQVHGLAIKTGYEKYTLVSNAT 329
Query: 92 INMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAISLF---HMMPLK-DL 147
+ MY + A K+FE++ KDLV WN+M+ +Y + A+S++ H++ +K D
Sbjct: 330 MTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDE 389
Query: 148 SSFNILISGYSSCGEVLAARSIFDKMAIKDIVSW-NSILSACTRAGDMEKAFALFQEMPM 206
+F L++ + ++ K + + N+++SA ++ G +EKA LF+
Sbjct: 390 FTFGSLLATSLDLDVLEMVQACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFERSLR 449
Query: 207 KNTISWNTMLAGCLQRGQFSEAVDLFDEM--KTTNCLPDYLTATSVLSACAHLGSLETGI 264
KN ISWN +++G G E ++ F + LPD T +++LS C SL G
Sbjct: 450 KNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGS 509
Query: 265 KIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHG 324
+ H Y + G + AL++MY++CG+I+ +L++F + KD+ WN++IS + HG
Sbjct: 510 QTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHG 569
Query: 325 HGYAALKLFGYMK 337
G A+ + M+
Sbjct: 570 EGENAVNTYKTMQ 582
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 150/337 (44%), Gaps = 23/337 (6%)
Query: 10 MPSLE-VRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRI 68
MP + V WN +I G E +V + M G R D + F +L
Sbjct: 149 MPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILSMCDYGSLD-F 207
Query: 69 GFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFE--NMPVKDLVAWNSMLDAY 126
G H IK GF+ V ALI MY DAC +FE ++ V+D V +N ++D
Sbjct: 208 GKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDGL 267
Query: 127 ASNGEMEDAISLFHMMPLK----DLSSFNILISGYSSCGEV------LAARSIFDKMAIK 176
A E + M+ DL+ +++ G SC + LA ++ ++K +
Sbjct: 268 AGFKRDESLLVFRKMLEASLRPTDLTFVSVM--GSCSCAAMGHQVHGLAIKTGYEKYTLV 325
Query: 177 DIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMK 236
N+ ++ + D A +F+ + K+ ++WNTM++ Q A+ ++ M
Sbjct: 326 S----NATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMH 381
Query: 237 TTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIE 296
PD T S+L+ L LE + I GL+S ++ AL+ Y+K G IE
Sbjct: 382 IIGVKPDEFTFGSLLATSLDLDVLEM---VQACIIKFGLSSKIEISNALISAYSKNGQIE 438
Query: 297 QALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLF 333
+A +F ++ K++ WNAIISG +G + L+ F
Sbjct: 439 KADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERF 475
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 94/174 (54%), Gaps = 4/174 (2%)
Query: 151 NILISGYSSCGEVLAARSIFDKMAIKDIVSWNSILSACTRAGDMEKAFALFQEMPMKNTI 210
N L+S Y G + + + FD++ D+ SW ++LSA + GD+E AF +F +MP ++ +
Sbjct: 96 NTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFDKMPERDDV 155
Query: 211 S-WNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVY 269
+ WN M+ GC + G +V+LF EM D ++LS C + GSL+ G ++H
Sbjct: 156 AIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILSMCDY-GSLDFGKQVHSL 214
Query: 270 AIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQ--VKDIYCWNAIISGLA 321
I +G + V AL+ MY C + A +F + V+D +N +I GLA
Sbjct: 215 VIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDGLA 268
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 152/322 (47%), Gaps = 18/322 (5%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTI 77
WN +I + + A+ Y M + G + D +TF LL + + I
Sbjct: 357 WNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATS---LDLDVLEMVQACII 413
Query: 78 KTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAIS 137
K G I + ALI+ Y A +FE K+L++WN+++ + NG + +
Sbjct: 414 KFGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLE 473
Query: 138 LF------HMMPLKDLSSFNILIS-GYSSCGEVLAARS---IFDKMAIKDIVSWNSILSA 187
F + L D + + L+S S+ +L +++ + K+ + N++++
Sbjct: 474 RFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINM 533
Query: 188 CTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTT-NCLPDYLT 246
++ G ++ + +F +M K+ +SWN++++ + G+ AV+ + M+ +PD T
Sbjct: 534 YSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAAT 593
Query: 247 ATSVLSACAHLGSLETGIKIHVYAI-YSGLASSPHVTTALMDMYAKCGSIEQA---LQIF 302
++VLSAC+H G +E G++I + + G+ + + L+D+ + G +++A ++I
Sbjct: 594 FSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVKIS 653
Query: 303 FKAQVKDIYCWNAIISGLALHG 324
K + W A+ S A HG
Sbjct: 654 EKTIGSRVDVWWALFSACAAHG 675
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 61/130 (46%), Gaps = 1/130 (0%)
Query: 210 ISWNTMLAGCLQRGQFSEAVDLF-DEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHV 268
++ N L G + G+ A+ LF D + T PD + + ++ HL G ++H
Sbjct: 22 LNLNRRLTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFGGQVHC 81
Query: 269 YAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYA 328
YAI SGL HV+ L+ +Y + G++ + F + D+Y W ++S G
Sbjct: 82 YAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEY 141
Query: 329 ALKLFGYMKK 338
A ++F M +
Sbjct: 142 AFEVFDKMPE 151
>AT5G08510.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:2753099-2754731 FORWARD
Length = 511
Score = 144 bits (363), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 73/186 (39%), Positives = 114/186 (61%), Gaps = 2/186 (1%)
Query: 153 LISGYSSCGEVLAARSIFDKMAIKDIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISW 212
LI+ Y+ G + AR +FD+M+ +D+ WN++++ R GDM+ A LF MP KN SW
Sbjct: 123 LITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKNVTSW 182
Query: 213 NTMLAGCLQRGQFSEAVDLFDEM-KTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAI 271
T+++G Q G +SEA+ +F M K + P+++T SVL ACA+LG LE G ++ YA
Sbjct: 183 TTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEGYAR 242
Query: 272 YSGLASSPHVTTALMDMYAKCGSIEQALQIFFK-AQVKDIYCWNAIISGLALHGHGYAAL 330
+G + +V A ++MY+KCG I+ A ++F + +++ WN++I LA HG AL
Sbjct: 243 ENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKHDEAL 302
Query: 331 KLFGYM 336
LF M
Sbjct: 303 TLFAQM 308
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 86/355 (24%), Positives = 155/355 (43%), Gaps = 51/355 (14%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTI 77
+N++I+ + + ++++ Y + G R ++TF + A+ ++R H Q
Sbjct: 50 YNKLIQAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFF 109
Query: 78 KTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAIS 137
++GF F T LI Y L A ++F+ M +D+ WN+M+ Y G+M+ A+
Sbjct: 110 RSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAME 169
Query: 138 LFHMMPLKDLSSFNILISGYSSCGEVLAARSIF-----DKMAIKDIVSWNSILSACTRAG 192
LF MP K+++S+ +ISG+S G A +F DK + ++ S+L AC G
Sbjct: 170 LFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLG 229
Query: 193 DME-----------------------------------KAFALFQEM-PMKNTISWNTML 216
++E A LF+E+ +N SWN+M+
Sbjct: 230 ELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMI 289
Query: 217 AGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKI-----HVYAI 271
G+ EA+ LF +M PD +T +L AC H G + G ++ V+ I
Sbjct: 290 GSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKI 349
Query: 272 YSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVK-DIYCWNAIISGLALHGH 325
L ++D+ + G +++A + +K D W ++ + HG+
Sbjct: 350 SPKLEH----YGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGN 400
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 128/288 (44%), Gaps = 38/288 (13%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQV-HGFRADNYTFPILLKAAGKNCASRI 68
MP V W +I GN +A+ ++ M+ + ++ T +L A I
Sbjct: 174 MPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEI 233
Query: 69 GFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENM-PVKDLVAWNSMLDAYA 127
G G + GF+ +I+V A I MY A ++FE + ++L +WNSM+ + A
Sbjct: 234 GRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLA 293
Query: 128 SNGEMEDAISLFHMMPLKDLSSFNILISGYSSCGEVLAARSIFDKMAIKDIVSWNSILSA 187
++G+ ++A++LF M L++ GE D V++ +L A
Sbjct: 294 THGKHDEALTLFAQM-LRE--------------GEK------------PDAVTFVGLLLA 326
Query: 188 CTRAGDMEKAFALFQEMPMKNTISWNTMLAGCL-----QRGQFSEAVDLFDEMKTTNCLP 242
C G + K LF+ M + IS GC+ + G+ EA DL +KT P
Sbjct: 327 CVHGGMVVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDL---IKTMPMKP 383
Query: 243 DYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYA 290
D + ++L AC+ G++E +I A++ ++P + ++YA
Sbjct: 384 DAVVWGTLLGACSFHGNVEIA-EIASEALFKLEPTNPGNCVIMSNIYA 430
>AT3G13880.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4572180-4574426 FORWARD
Length = 748
Score = 144 bits (363), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 102/336 (30%), Positives = 160/336 (47%), Gaps = 16/336 (4%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCAS---RIGFAFHG 74
WN +I ++ VG AE+ + M G Y +LKA N G A H
Sbjct: 217 WNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHC 276
Query: 75 QTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMED 134
T K G I V+TAL++MY +A K+F MP K++V +N+M+ + E+ D
Sbjct: 277 YTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITD 336
Query: 135 -----AISLFHMMPLKDL----SSFNILISGYSSCGEVLAARSIFDKMAIKDIVSWNSIL 185
A LF M + L S+F++++ S+ + R I + + S I
Sbjct: 337 EASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIG 396
Query: 186 SACTR----AGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCL 241
SA G E F ++ SW +M+ +Q Q A DLF ++ +++
Sbjct: 397 SALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIR 456
Query: 242 PDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQI 301
P+ T + ++SACA +L +G +I YAI SG+ + V T+ + MYAK G++ A Q+
Sbjct: 457 PEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQV 516
Query: 302 FFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMK 337
F + Q D+ ++A+IS LA HG AL +F MK
Sbjct: 517 FIEVQNPDVATYSAMISSLAQHGSANEALNIFESMK 552
Score = 133 bits (335), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/340 (27%), Positives = 155/340 (45%), Gaps = 16/340 (4%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
MP + +N +I + +G EQA+ ++ + + D +T+ L G+ C +G
Sbjct: 108 MPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLG 167
Query: 70 FAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASN 129
HG + G + +F+ LI+MY A +F+ +D V+WNS++ Y
Sbjct: 168 ELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRV 227
Query: 130 GEMEDAISLFHMMPLKDLS-SFNILISGYSSCGEVLAARSIFDKMAIK----------DI 178
G E+ ++L M L+ + L S +C L I MAI DI
Sbjct: 228 GAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDI 287
Query: 179 VSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQF-----SEAVDLFD 233
V ++L + G +++A LF MP KN +++N M++G LQ + SEA LF
Sbjct: 288 VVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFM 347
Query: 234 EMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCG 293
+M+ P T + VL AC+ +LE G +IH + S + +AL+++YA G
Sbjct: 348 DMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMG 407
Query: 294 SIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLF 333
S E +Q F +DI W ++I + +A LF
Sbjct: 408 STEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLF 447
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 148/326 (45%), Gaps = 17/326 (5%)
Query: 9 FMPSLEVRRWNEIIKKHMLVGN-----AEQAVLTYVNMQVHGFRADNYTFPILLKAAGKN 63
MPS V +N +I + + + +A +++MQ G TF ++LKA
Sbjct: 312 LMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAA 371
Query: 64 CASRIGFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSML 123
G H K F F+ +ALI +Y + T D + F + +D+ +W SM+
Sbjct: 372 KTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMI 431
Query: 124 DAYASNGEMEDAISLFHMMPLKDLSSFNILIS-GYSSCGE--VLAARSIFDKMAIKD-IV 179
D + N ++E A LF + + +S S+C + L++ AIK I
Sbjct: 432 DCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGID 491
Query: 180 SWNSI----LSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEM 235
++ S+ +S ++G+M A +F E+ + +++ M++ Q G +EA+++F+ M
Sbjct: 492 AFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESM 551
Query: 236 KTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVT--TALMDMYAKCG 293
KT P+ VL AC H G + G+K + + + +P+ T L+D+ + G
Sbjct: 552 KTHGIKPNQQAFLGVLIACCHGGLVTQGLK-YFQCMKNDYRINPNEKHFTCLVDLLGRTG 610
Query: 294 SIEQALQIFFKAQVKD-IYCWNAIIS 318
+ A + + +D W A++S
Sbjct: 611 RLSDAENLILSSGFQDHPVTWRALLS 636
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 139/314 (44%), Gaps = 73/314 (23%)
Query: 49 DNYTFPILLKAAGKNCASRIGFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMF 108
D+ + IL + A K+ + +G HG IK+ +++ L+NMY A ++F
Sbjct: 46 DSEGYKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLF 105
Query: 109 ENMPVKDLVAWNSMLDAYASNGEMEDAISLF----------------------------- 139
+ MP ++++++NS++ Y G E A+ LF
Sbjct: 106 DRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLD 165
Query: 140 ------HMMPLKDLSS----FNILISGYSSCGEVLAARSIFDKMAIKDIVSWNSILSACT 189
++ + LS N+LI YS CG++ A S+FD+ +D VSWNS++S
Sbjct: 166 LGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYV 225
Query: 190 RAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATS 249
R G E+ L +M ++ ++ T G S
Sbjct: 226 RVGAAEEPLNLLAKMH-RDGLNLTTYALG------------------------------S 254
Query: 250 VLSACA---HLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQ 306
VL AC + G +E G+ IH Y G+ V TAL+DMYAK GS+++A+++F
Sbjct: 255 VLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMP 314
Query: 307 VKDIYCWNAIISGL 320
K++ +NA+ISG
Sbjct: 315 SKNVVTYNAMISGF 328
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 74/142 (52%)
Query: 197 AFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAH 256
A LF MP +N IS+N++++G Q G + +A++LF E + N D T L C
Sbjct: 101 ARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGE 160
Query: 257 LGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAI 316
L+ G +H + +GL+ + L+DMY+KCG ++QA+ +F + +D WN++
Sbjct: 161 RCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSL 220
Query: 317 ISGLALHGHGYAALKLFGYMKK 338
ISG G L L M +
Sbjct: 221 ISGYVRVGAAEEPLNLLAKMHR 242
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD
Length = 786
Score = 143 bits (361), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 97/358 (27%), Positives = 159/358 (44%), Gaps = 74/358 (20%)
Query: 53 FPILLKAAGKNCASRIGFAFHGQTIKTGF-YRHIFVQTALINMYGTLHCTADACKMFENM 111
F + L N S+ G+A H + + R F +++ Y C+ F+ +
Sbjct: 47 FSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQL 106
Query: 112 PVKDLVAWNSMLDAYASNGEMEDAISLFH--------------------------MMPLK 145
P +D V+W +M+ Y + G+ AI + M K
Sbjct: 107 PQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGK 166
Query: 146 DLSSF-------------NILISGYSSCGEVLAARSIFDKMAIKDIVSWNSILSACTRAG 192
+ SF N L++ Y+ CG+ + A+ +FD+M ++DI SWN++++ + G
Sbjct: 167 KVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVG 226
Query: 193 DMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCL-PDYLTATSVL 251
M+ A A F++M ++ ++WN+M++G QRG A+D+F +M + L PD T SVL
Sbjct: 227 QMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVL 286
Query: 252 SACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIE--------------- 296
SACA+L L G +IH + + +G S V AL+ MY++CG +E
Sbjct: 287 SACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLK 346
Query: 297 ------------------QALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYM 336
QA IF + +D+ W A+I G HG A+ LF M
Sbjct: 347 IEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSM 404
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 106/407 (26%), Positives = 161/407 (39%), Gaps = 76/407 (18%)
Query: 6 CNCF--MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKN 63
C F +P + W +I + +G +A+ +M G +T +L +
Sbjct: 100 CEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAAT 159
Query: 64 CASRIGFAFHGQTIKTGFYRHIFVQTALINMYG--------------------------- 96
G H +K G ++ V +L+NMY
Sbjct: 160 RCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMI 219
Query: 97 TLHCTAD----ACKMFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMPLKDLSS--- 149
LH A FE M +D+V WNSM+ + G A+ +F M L S
Sbjct: 220 ALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDR 279
Query: 150 -------------------------------------FNILISGYSSCGEVLAARSIFDK 172
N LIS YS CG V AR + ++
Sbjct: 280 FTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQ 339
Query: 173 MAIKD--IVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVD 230
KD I + ++L + GDM +A +F + ++ ++W M+ G Q G + EA++
Sbjct: 340 RGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAIN 399
Query: 231 LFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYA 290
LF M P+ T ++LS + L SL G +IH A+ SG S V+ AL+ MYA
Sbjct: 400 LFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYA 459
Query: 291 KCGSIEQALQIFFKAQV-KDIYCWNAIISGLALHGHGYAALKLFGYM 336
K G+I A + F + +D W ++I LA HGH AL+LF M
Sbjct: 460 KAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETM 506
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 86/387 (22%), Positives = 154/387 (39%), Gaps = 78/387 (20%)
Query: 14 EVRRWNEIIKKHMLVGN-----------AEQAVLTYVNMQVHGF-------RA------- 48
++ WN +I HM VG AE+ ++T+ N + GF RA
Sbjct: 211 DISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTW-NSMISGFNQRGYDLRALDIFSKM 269
Query: 49 --------DNYTFPILLKAAGKNCASRIGFAFHGQTIKTGFYRHIFVQTALINMYGTLHC 100
D +T +L A IG H + TGF V ALI+MY
Sbjct: 270 LRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGG 329
Query: 101 TADACKMFENMPVKDLV--AWNSMLDAYASNGEMEDAISLFHMMPLKDLSSFNILISGYS 158
A ++ E KDL + ++LD Y G+M A ++F + +D+ ++ +I GY
Sbjct: 330 VETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYE 389
Query: 159 SCGEVLAARSIFDKMA---------------------------------------IKDIV 179
G A ++F M I +
Sbjct: 390 QHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVS 449
Query: 180 SWNSILSACTRAGDMEKAFALFQEMP-MKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTT 238
N++++ +AG++ A F + ++T+SW +M+ Q G EA++LF+ M
Sbjct: 450 VSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLME 509
Query: 239 NCLPDYLTATSVLSACAHLGSLETGIK-IHVYAIYSGLASSPHVTTALMDMYAKCGSIEQ 297
PD++T V SAC H G + G + + + + ++D++ + G +++
Sbjct: 510 GLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQE 569
Query: 298 ALQIFFKAQVK-DIYCWNAIISGLALH 323
A + K ++ D+ W +++S +H
Sbjct: 570 AQEFIEKMPIEPDVVTWGSLLSACRVH 596
>AT2G39620.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:16518968-16521478 REVERSE
Length = 836
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 102/329 (31%), Positives = 163/329 (49%), Gaps = 9/329 (2%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNM-QVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQT 76
WN +I+ + G +A+ + M + G D Y+F LKA + + G H
Sbjct: 67 WNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHDLI 126
Query: 77 IKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAI 136
+ G +++ TAL+ MY A ++F+ M VKD+V WN+M+ A NG A+
Sbjct: 127 AEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAAL 186
Query: 137 SLFHMM-----PLKDLSSFNILISGYSSCGEVLAARSIFDKMAIKD-IVSWNS-ILSACT 189
LFH M + +S +N LI S + R + + K I +++S ++
Sbjct: 187 LLFHDMRSCCVDIDHVSLYN-LIPAVSKLEKSDVCRCLHGLVIKKGFIFAFSSGLIDMYC 245
Query: 190 RAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATS 249
D+ A ++F+E+ K+ SW TM+A G F E ++LFD M+ + + + A S
Sbjct: 246 NCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAAS 305
Query: 250 VLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKD 309
L A A++G L GI IH YA+ GL V T+LM MY+KCG +E A Q+F + +D
Sbjct: 306 ALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRD 365
Query: 310 IYCWNAIISGLALHGHGYAALKLFGYMKK 338
+ W+A+I+ G A+ LF M +
Sbjct: 366 VVSWSAMIASYEQAGQHDEAISLFRDMMR 394
Score = 142 bits (357), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 100/333 (30%), Positives = 161/333 (48%), Gaps = 12/333 (3%)
Query: 14 EVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFH 73
+V WN ++ G + A+L + +M+ D+ + L+ A K S + H
Sbjct: 165 DVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLH 224
Query: 74 GQTIKTGFYRHIFV-QTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEM 132
G IK GF IF + LI+MY A +FE + KD +W +M+ AYA NG
Sbjct: 225 GLVIKKGF---IFAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFF 281
Query: 133 EDAISLFHMMPLKDLSSFNILISGYSS----CGEVLAARSIFD----KMAIKDIVSWNSI 184
E+ + LF +M D+ + + G+++ +I D + I D+ S+
Sbjct: 282 EEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSL 341
Query: 185 LSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDY 244
+S ++ G++E A LF + ++ +SW+ M+A Q GQ EA+ LF +M + P+
Sbjct: 342 MSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNA 401
Query: 245 LTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFK 304
+T TSVL CA + + G IH YAI + + S TA++ MYAKCG AL+ F +
Sbjct: 402 VTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFER 461
Query: 305 AQVKDIYCWNAIISGLALHGHGYAALKLFGYMK 337
+KD +NA+ G G A ++ MK
Sbjct: 462 LPIKDAVAFNALAQGYTQIGDANKAFDVYKNMK 494
Score = 141 bits (355), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 159/334 (47%), Gaps = 9/334 (2%)
Query: 14 EVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFH 73
+V W+ +I + G ++A+ + +M + + T +L+ ASR+G + H
Sbjct: 365 DVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIH 424
Query: 74 GQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEME 133
IK + TA+I+MY + A K FE +P+KD VA+N++ Y G+
Sbjct: 425 CYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDAN 484
Query: 134 DAISLFHMMPL----KDLSSFNILISGYSSCGEVLAARSIFDKMAIKDIVSW----NSIL 185
A ++ M L D + ++ + C + ++ ++ S ++++
Sbjct: 485 KAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALI 544
Query: 186 SACTRAGDMEKAFALFQEMPM-KNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDY 244
+ T+ + A LF + K+T+SWN M+ G L GQ EAV F +MK P+
Sbjct: 545 NMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNA 604
Query: 245 LTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFK 304
+T +++ A A L +L G+ +H I G S V +L+DMYAKCG IE + + F +
Sbjct: 605 VTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIE 664
Query: 305 AQVKDIYCWNAIISGLALHGHGYAALKLFGYMKK 338
K I WN ++S A HG A+ LF M++
Sbjct: 665 ISNKYIVSWNTMLSAYAAHGLASCAVSLFLSMQE 698
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/325 (26%), Positives = 149/325 (45%), Gaps = 11/325 (3%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
+P + +N + + + +G+A +A Y NM++HG D+ T +L+ G
Sbjct: 462 LPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARG 521
Query: 70 FAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPV-KDLVAWNSMLDAYAS 128
+GQ IK GF V ALINM+ A A +F+ K V+WN M++ Y
Sbjct: 522 SCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLL 581
Query: 129 NGEMEDAISLFHMMPLKDLS----SFNILISGYSSCGEVLAARSIFDKMAIKDIVSW--- 181
+G+ E+A++ F M ++ +F ++ + + S+ + S
Sbjct: 582 HGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPV 641
Query: 182 -NSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNC 240
NS++ + G +E + F E+ K +SWNTML+ G S AV LF M+
Sbjct: 642 GNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSMQENEL 701
Query: 241 LPDYLTATSVLSACAHLGSLETGIKI-HVYAIYSGLASSPHVTTALMDMYAKCGSIEQAL 299
PD ++ SVLSAC H G +E G +I + + ++D+ K G +A+
Sbjct: 702 KPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEVEHYACMVDLLGKAGLFGEAV 761
Query: 300 QIFFKAQVK-DIYCWNAIISGLALH 323
++ + +VK + W A+++ +H
Sbjct: 762 EMMRRMRVKTSVGVWGALLNSSRMH 786
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 131/297 (44%), Gaps = 17/297 (5%)
Query: 50 NYTFPILLKAAGKNCASRIGFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFE 109
NYT +L+ KN R HG I +G H LIN Y + +F+
Sbjct: 4 NYTNLLLMLRECKN--FRCLLQVHGSLIVSGLKPH----NQLINAYSLFQRQDLSRVIFD 57
Query: 110 NMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMPLK-----DLSSFNILISGYSSCGEVL 164
++ +V WNSM+ Y G +A+ F M + D SF + + +
Sbjct: 58 SVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFK 117
Query: 165 AARSIFDKMA----IKDIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCL 220
I D +A D+ +++ +A D+ A +F +M +K+ ++WNTM++G
Sbjct: 118 KGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLA 177
Query: 221 QRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPH 280
Q G S A+ LF +M++ D+++ +++ A + L + +H I G +
Sbjct: 178 QNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIFA-- 235
Query: 281 VTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMK 337
++ L+DMY C + A +F + KD W +++ A +G L+LF M+
Sbjct: 236 FSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMR 292
>AT3G25970.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:9500116-9502056 REVERSE
Length = 646
Score = 142 bits (359), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 110/441 (24%), Positives = 179/441 (40%), Gaps = 114/441 (25%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
MP + WN +I + G E A + M+ G D Y+F LLK +G
Sbjct: 6 MPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLG 65
Query: 70 FAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASN 129
HG IK G+ +++V ++L++MY DA + F+ + + V+WN+++ +
Sbjct: 66 EQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQV 125
Query: 130 GEMEDAISLFHMMPLK-----DLSSF---------------------------------- 150
+++ A L +M +K D +F
Sbjct: 126 RDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITI 185
Query: 151 -NILISGYSSCGEVLAARSIFD-------------------KMAIK-------------- 176
N +IS Y+ CG V A+ +FD K +K
Sbjct: 186 CNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHW 245
Query: 177 ---DIVSWNSILSACT-------------------------------------RAGDMEK 196
DI ++ +LSAC+ G ME
Sbjct: 246 VETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMED 305
Query: 197 AFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAH 256
A +LF+ + K+ ISWN+++ G Q+G +AV F ++++ D +++L +C+
Sbjct: 306 ALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSD 365
Query: 257 LGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVK-DIYCWNA 315
L +L+ G +IH A SG S+ V ++L+ MY+KCG IE A + F + K WNA
Sbjct: 366 LATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNA 425
Query: 316 IISGLALHGHGYAALKLFGYM 336
+I G A HG G +L LF M
Sbjct: 426 MILGYAQHGLGQVSLDLFSQM 446
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 149/309 (48%), Gaps = 26/309 (8%)
Query: 12 SLEVRRWNEII---KKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRI 68
S ++ WN +I KH L E A ++ MQ H D YT+ LL A
Sbjct: 212 SKDLISWNSMIAGFSKHEL---KESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIF 268
Query: 69 GFAFHGQTIKTGFYRHIFVQTALINMY-----GTLHCTADACKMFENMPVKDLVAWNSML 123
G + HG IK G + ALI+MY GT+ DA +FE++ KDL++WNS++
Sbjct: 269 GKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTME---DALSLFESLKSKDLISWNSII 325
Query: 124 DAYASNGEMEDAISLFHMMPLKDLS----SFNILISGYSSCGEVLAARSIFDKMAIKDIV 179
+A G EDA+ F + ++ +F+ L+ S + + I V
Sbjct: 326 TGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFV 385
Query: 180 SWNSILSAC----TRAGDMEKAFALFQEMPMK-NTISWNTMLAGCLQRGQFSEAVDLFDE 234
S ++S+ ++ G +E A FQ++ K +T++WN M+ G Q G ++DLF +
Sbjct: 386 SNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQ 445
Query: 235 MKTTNCLPDYLTATSVLSACAHLGSLETGIKI--HVYAIYSGLASSPHVTTALMDMYAKC 292
M N D++T T++L+AC+H G ++ G+++ + +Y H A+ D+ +
Sbjct: 446 MCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAV-DLLGRA 504
Query: 293 GSIEQALQI 301
G + +A ++
Sbjct: 505 GLVNKAKEL 513
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 116/244 (47%), Gaps = 14/244 (5%)
Query: 107 MFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMPLK----DLSSFNILISGYSSCGE 162
+F+ MP +D V+WN+M+ Y S G++EDA LF M D SF+ L+ G +S
Sbjct: 2 LFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKR 61
Query: 163 VLAARSIFDKMAIK-----DIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLA 217
+ + IK ++ +S++ + +E AF F+E+ N++SWN ++A
Sbjct: 62 FDLGEQVHG-LVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIA 120
Query: 218 GCLQRGQFSEAVDLFD--EMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGL 275
G +Q A L EMK + D T +L+ ++H + GL
Sbjct: 121 GFVQVRDIKTAFWLLGLMEMKAAVTM-DAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGL 179
Query: 276 ASSPHVTTALMDMYAKCGSIEQALQIFFK-AQVKDIYCWNAIISGLALHGHGYAALKLFG 334
+ A++ YA CGS+ A ++F KD+ WN++I+G + H +A +LF
Sbjct: 180 QHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFI 239
Query: 335 YMKK 338
M++
Sbjct: 240 QMQR 243
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 109/265 (41%), Gaps = 40/265 (15%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
+ S ++ WN II G +E AV + ++ + D+Y F LL++ ++G
Sbjct: 313 LKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLG 372
Query: 70 FAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVK-DLVAWNSMLDAYAS 128
H K+GF + FV ++LI MY A K F+ + K VAWN+M+ YA
Sbjct: 373 QQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQ 432
Query: 129 NGEMEDAISLFHMMPLKDLSSFNILISGYSSCGEVLAARSIFDKMAIKDIVSWNSILSAC 188
+G + ++ LF M C + + D V++ +IL+AC
Sbjct: 433 HGLGQVSLDLFSQM-----------------CNQNVKL----------DHVTFTAILTAC 465
Query: 189 TRAGDMEKAFALFQEM-------PMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCL 241
+ G +++ L M P + L G + G ++A +L + M
Sbjct: 466 SHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLG--RAGLVNKAKELIESMPLN--- 520
Query: 242 PDYLTATSVLSACAHLGSLETGIKI 266
PD + + L C G +E ++
Sbjct: 521 PDPMVLKTFLGVCRACGEIEMATQV 545
>AT4G20770.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:11130762-11132984 REVERSE
Length = 740
Score = 142 bits (358), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 108/420 (25%), Positives = 177/420 (42%), Gaps = 87/420 (20%)
Query: 6 CNCF--MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKN 63
C F MP +V WN +I + G E+A++ Y M GF +T +L A K
Sbjct: 58 CEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVLSACSKV 117
Query: 64 CASRIGFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTAD-ACKMFENMPVKDLVAWNSM 122
G HG +KTG ++IFV AL++MY D ++FE++ + V++ ++
Sbjct: 118 LDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAV 177
Query: 123 LDAYASNGEMEDAISLFHMMPLK------------------------------------- 145
+ A ++ +A+ +F +M K
Sbjct: 178 IGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQI 237
Query: 146 -----------DLSSFNILISGYSSCGEVLAARSIFDKMAIKDIVSWN------------ 182
DL N L+ Y+ ++ A IF +M ++VSWN
Sbjct: 238 HCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRS 297
Query: 183 -----------------------SILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGC 219
S+L AC R+GD+E +F +P + +WN ML+G
Sbjct: 298 DKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQPSVSAWNAMLSGY 357
Query: 220 LQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSP 279
+ EA+ F +M+ N PD T + +LS+CA L LE G +IH I + ++ +
Sbjct: 358 SNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNS 417
Query: 280 HVTTALMDMYAKCGSIEQALQIFFKAQVK-DIYCWNAIISGLALHGHGYAALKLFGYMKK 338
H+ + L+ +Y++C +E + IF + DI CWN++ISG + AL LF M +
Sbjct: 418 HIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQ 477
Score = 114 bits (285), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 105/187 (56%), Gaps = 1/187 (0%)
Query: 151 NILISGYSSCGEVLAARSIFDKMAIKDIVSWNSILSACTRAGDMEKAFALFQEMPMKNTI 210
N L+ Y CG+ AR +FD+M+++D+ SWN+ L+ + GD+ +A +F MP ++ +
Sbjct: 11 NRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVV 70
Query: 211 SWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYA 270
SWN M++ +++G +A+ ++ M LP T SVLSAC+ + G++ H A
Sbjct: 71 SWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVA 130
Query: 271 IYSGLASSPHVTTALMDMYAKCGSI-EQALQIFFKAQVKDIYCWNAIISGLALHGHGYAA 329
+ +GL + V AL+ MYAKCG I + +++F + + A+I GLA A
Sbjct: 131 VKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEA 190
Query: 330 LKLFGYM 336
+++F M
Sbjct: 191 VQMFRLM 197
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 148/337 (43%), Gaps = 45/337 (13%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
MP + V WN +I ++++V M+ GF+ + T C S +G
Sbjct: 276 MPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVT-----------CISVLG 324
Query: 70 FAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASN 129
F ++TG ++F ++P + AWN+ML Y++
Sbjct: 325 ACFRSGDVETGR------------------------RIFSSIPQPSVSAWNAMLSGYSNY 360
Query: 130 GEMEDAISLFHMMPLKDLSSFNILISG-YSSCGEV--LAARSIFDKMAIKDIVSWNS--- 183
E+AIS F M ++L +S SSC + L + I+ +S NS
Sbjct: 361 EHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIV 420
Query: 184 --ILSACTRAGDMEKAFALFQEMPMKNTIS-WNTMLAGCLQRGQFSEAVDLFDEMKTTNC 240
+++ + ME + +F + + I+ WN+M++G ++A+ LF M T
Sbjct: 421 SGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAV 480
Query: 241 L-PDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQAL 299
L P+ + +VLS+C+ L SL G + H + SG S V TAL DMY KCG I+ A
Sbjct: 481 LCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSAR 540
Query: 300 QIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYM 336
Q F K+ WN +I G +G G A+ L+ M
Sbjct: 541 QFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKM 577
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 146/333 (43%), Gaps = 24/333 (7%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
+P V WN ++ + + E+A+ + MQ + D T ++L + + G
Sbjct: 342 IPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGG 401
Query: 70 FAFHGQTIKTGFYRHIFVQTALINMYGTLH------CTADACKMFENMPVKDLVAWNSML 123
HG I+T ++ + + LI +Y C D C + D+ WNSM+
Sbjct: 402 KQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDC-----INELDIACWNSMI 456
Query: 124 DAYASNGEMEDAISLFHMMP-----LKDLSSFNILISGYSSCGEVLAARSIFDKMAIKDI 178
+ N A+ LF M + +SF ++S S +L R +
Sbjct: 457 SGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGY 516
Query: 179 VSWNSILSACT----RAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDE 234
VS + + +A T + G+++ A F + KNT+ WN M+ G G+ EAV L+ +
Sbjct: 517 VSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRK 576
Query: 235 MKTTNCLPDYLTATSVLSACAHLGSLETGIKI--HVYAIYSGLASSPHVTTALMDMYAKC 292
M ++ PD +T SVL+AC+H G +ETG++I + I+ G+ ++D +
Sbjct: 577 MISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIH-GIEPELDHYICIVDCLGRA 635
Query: 293 GSIEQALQIFFKAQVKDIYC-WNAIISGLALHG 324
G +E A ++ K W ++S +HG
Sbjct: 636 GRLEDAEKLAEATPYKSSSVLWEILLSSCRVHG 668
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 131/289 (45%), Gaps = 38/289 (13%)
Query: 81 FYRHIFVQTALINMYG-----TLHCT----ADACKMFENMPVKDLVAWNSMLDAYASNGE 131
+ R +F + ++ ++Y T C +AC++F+ MP +D+V+WN+M+ G
Sbjct: 25 YARKVFDEMSVRDVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGF 84
Query: 132 MEDAISLFHMMPLKD-LSSFNILISGYSSCGEVL-----------AARSIFDKMAIKDIV 179
E A+ ++ M L S L S S+C +VL A ++ D K+I
Sbjct: 85 EEKALVVYKRMVCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLD----KNIF 140
Query: 180 SWNSILSACTRAG-DMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEM--- 235
N++LS + G ++ +F+ + N +S+ ++ G + + EAV +F M
Sbjct: 141 VGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEK 200
Query: 236 ---KTTNCLPDYLTATSVLSACAHLGSL---ETGIKIHVYAIYSGLASSPHVTTALMDMY 289
+ CL + L+ ++ C L + E G +IH A+ G H+ +L+++Y
Sbjct: 201 GVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIY 260
Query: 290 AKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMKK 338
AK + A IF + ++ WN +I G G Y + K ++ +
Sbjct: 261 AKNKDMNGAELIFAEMPEVNVVSWNIMIVGF---GQEYRSDKSVEFLTR 306
>AT2G01510.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:230752-232506 REVERSE
Length = 584
Score = 142 bits (358), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 96/319 (30%), Positives = 155/319 (48%), Gaps = 14/319 (4%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTI 77
WN + K ++ +++L Y M+ G R D +T+P ++KA + GFA H +
Sbjct: 77 WNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVV 136
Query: 78 KTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAIS 137
K GF V T L+ MY + A +FE+M VKDLVAWN+ L G A+
Sbjct: 137 KYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALE 196
Query: 138 LFHMMPLKDLSSFN--ILISGYSSCGEVLA---ARSIFDKMAIKD----IVSWNSILSAC 188
F+ M D F+ ++S S+CG++ + I+D+ ++ I+ N+ L
Sbjct: 197 YFNKM-CADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMH 255
Query: 189 TRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTAT 248
+ G+ E A LF+EM +N +SW+TM+ G G EA+ LF M+ P+Y+T
Sbjct: 256 LKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFL 315
Query: 249 SVLSACAHLGSLETGIKIHVYAIYS---GLASSPHVTTALMDMYAKCGSIEQALQIFFKA 305
VLSAC+H G + G + + S L ++D+ + G +E+A + K
Sbjct: 316 GVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKM 375
Query: 306 QVK-DIYCWNAIISGLALH 323
V+ D W A++ A+H
Sbjct: 376 PVEPDTGIWGALLGACAVH 394
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 134/279 (48%), Gaps = 20/279 (7%)
Query: 73 HGQTIKTGFYRHIFVQTALINMYGTLHCTADAC---KMFENMPVKDLVAWNSMLDAYASN 129
H ++TGF + T L+ L D C ++F+ M + WN++ Y N
Sbjct: 31 HAIVLRTGFSEKNSLLTQLLE---NLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRN 87
Query: 130 GEMEDAISLFHMMPLKDLS------SFNILISGYS-----SCGEVLAARSIFDKMAIKDI 178
+++ L+ M +DL ++ ++ S SCG L A + I
Sbjct: 88 QLPFESLLLYKKM--RDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGI 145
Query: 179 VSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTT 238
V+ ++ + G++ A LF+ M +K+ ++WN LA C+Q G + A++ F++M
Sbjct: 146 VA-TELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCAD 204
Query: 239 NCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQA 298
D T S+LSAC LGSLE G +I+ A + + V A +DM+ KCG+ E A
Sbjct: 205 AVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAA 264
Query: 299 LQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMK 337
+F + + +++ W+ +I G A++G AL LF M+
Sbjct: 265 RVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQ 303
>AT5G59200.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:23888793-23890565 REVERSE
Length = 590
Score = 142 bits (357), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 150/301 (49%), Gaps = 35/301 (11%)
Query: 71 AFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNG 130
+ H + I+T + FV LI + TL A +F + ++ + +M+D + S+G
Sbjct: 93 SIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYVSNPNVYLYTAMIDGFVSSG 152
Query: 131 EMEDAISLFHMMPLKDLSSFNILISG---------------------------------- 156
D +SL+H M + N +I+
Sbjct: 153 RSADGVSLYHRMIHNSVLPDNYVITSVLKACDLKVCREIHAQVLKLGFGSSRSVGLKMME 212
Query: 157 -YSSCGEVLAARSIFDKMAIKDIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTM 215
Y GE++ A+ +FD+M +D V+ +++ + G +++A LFQ++ +K+T+ W M
Sbjct: 213 IYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTVCWTAM 272
Query: 216 LAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGL 275
+ G ++ + ++A++LF EM+ N + TA VLSAC+ LG+LE G +H + +
Sbjct: 273 IDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRM 332
Query: 276 ASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGY 335
S V AL++MY++CG I +A ++F + KD+ +N +ISGLA+HG A+ F
Sbjct: 333 ELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRD 392
Query: 336 M 336
M
Sbjct: 393 M 393
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 85/340 (25%), Positives = 153/340 (45%), Gaps = 49/340 (14%)
Query: 29 GNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTIKTGFYRHIFVQ 88
G + V Y M + DNY +LKA C ++ H Q +K GF V
Sbjct: 152 GRSADGVSLYHRMIHNSVLPDNYVITSVLKA----CDLKVCREIHAQVLKLGFGSSRSVG 207
Query: 89 TALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMPLKDLS 148
++ +YG +A KMF+ MP +D VA M++ Y+ G +++A+ LF + +KD
Sbjct: 208 LKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTV 267
Query: 149 SFNILISGYSSCGEVLAARSIFDKMAIKDIVSWNS-----ILSACT-------------- 189
+ +I G E+ A +F +M +++ VS N +LSAC+
Sbjct: 268 CWTAMIDGLVRNKEMNKALELFREMQMEN-VSANEFTAVCVLSACSDLGALELGRWVHSF 326
Query: 190 ---------------------RAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEA 228
R GD+ +A +F+ M K+ IS+NTM++G G EA
Sbjct: 327 VENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEA 386
Query: 229 VDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVT--TALM 286
++ F +M P+ +T ++L+AC+H G L+ G+++ ++ P + ++
Sbjct: 387 INEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEV-FNSMKRVFNVEPQIEHYGCIV 445
Query: 287 DMYAKCGSIEQALQIFFKAQVK-DIYCWNAIISGLALHGH 325
D+ + G +E+A + ++ D ++S +HG+
Sbjct: 446 DLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGN 485
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 94/226 (41%), Gaps = 39/226 (17%)
Query: 147 LSSFNILISGYSSCGEVLAARSIFDKMAI----KDIVSWNSILSACTRAGDMEKAFALFQ 202
LS LIS SC + SI K+ +D ++ C+ ++ A+ +F
Sbjct: 72 LSRRKTLISVLRSCKNIAHVPSIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFS 131
Query: 203 EMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLET 262
+ N + M+ G + G+ ++ V L+ M + LPD TSVL AC L+
Sbjct: 132 YVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKAC----DLKV 187
Query: 263 GIKIHVYAIYSGLASSPHVTTALMDMYAK------------------------------- 291
+IH + G SS V +M++Y K
Sbjct: 188 CREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSE 247
Query: 292 CGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMK 337
CG I++AL++F ++KD CW A+I GL + AL+LF M+
Sbjct: 248 CGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQ 293
>AT5G61800.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:24830054-24831553 REVERSE
Length = 499
Score = 142 bits (357), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 71/193 (36%), Positives = 109/193 (56%)
Query: 144 LKDLSSFNILISGYSSCGEVLAARSIFDKMAIKDIVSWNSILSACTRAGDMEKAFALFQE 203
L DL + N LI YS + +A +FD+ +D+V++N ++ +A ++ +A LF
Sbjct: 149 LSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDS 208
Query: 204 MPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETG 263
MP+++ +SWN++++G Q EA+ LFDEM PD + S LSACA G + G
Sbjct: 209 MPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKG 268
Query: 264 IKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALH 323
IH Y L + T L+D YAKCG I+ A++IF K ++ WNA+I+GLA+H
Sbjct: 269 KAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMH 328
Query: 324 GHGYAALKLFGYM 336
G+G + F M
Sbjct: 329 GNGELTVDYFRKM 341
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 144/336 (42%), Gaps = 49/336 (14%)
Query: 38 YVNMQVHGFRADNYTFPILLKA--AGKNCASRIGFAFHGQTIKTGFYRHIFVQTALINMY 95
+V M+ D +TFP + KA A KN + H Q ++ G +F LI +Y
Sbjct: 103 FVEMRRRSVPPDFHTFPFVFKACAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVY 162
Query: 96 GTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMPLKDLSSFNILIS 155
+ A ++F+ P +D+V +N ++D E+ A LF MPL+DL S+N LIS
Sbjct: 163 SLIAPIDSALQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLIS 222
Query: 156 GYSSCGEVLAARSIFDKMAI----KDIVSWNSILSACTRAGDMEK--------------- 196
GY+ A +FD+M D V+ S LSAC ++GD +K
Sbjct: 223 GYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFI 282
Query: 197 --------------------AFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMK 236
A +F+ K +WN M+ G G VD F +M
Sbjct: 283 DSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMV 342
Query: 237 TTNCLPDYLTATSVLSACAHLGSLETGIKI--HVYAIYSGLASSPHVTTALMDMYAKCGS 294
++ PD +T SVL C+H G ++ + + ++Y H + D+ + G
Sbjct: 343 SSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHY-GCMADLLGRAGL 401
Query: 295 IEQALQIFFK-----AQVKDIYCWNAIISGLALHGH 325
IE+A ++ + + + W+ ++ G +HG+
Sbjct: 402 IEEAAEMIEQMPKDGGNREKLLAWSGLLGGCRIHGN 437
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 102/233 (43%), Gaps = 14/233 (6%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
MP ++ WN +I + + + +A+ + M G + DN L A ++ + G
Sbjct: 209 MPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKG 268
Query: 70 FAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASN 129
A H T + + F+ T L++ Y A ++FE K L WN+M+ A +
Sbjct: 269 KAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMH 328
Query: 130 GEMEDAISLFHMMP----LKDLSSFNILISGYSSCGEVLAARSIFDKM-----AIKDIVS 180
G E + F M D +F ++ G S G V AR++FD+M +++
Sbjct: 329 GNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKH 388
Query: 181 WNSILSACTRAGDMEKAFALFQEMP-----MKNTISWNTMLAGCLQRGQFSEA 228
+ + RAG +E+A + ++MP + ++W+ +L GC G A
Sbjct: 389 YGCMADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAWSGLLGGCRIHGNIEIA 441
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 65/143 (45%), Gaps = 3/143 (2%)
Query: 197 AFALFQEMPMKNTISWNTMLAGC-LQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACA 255
A ++F+ + +T +NT++ C L + F EM+ + PD+ T V ACA
Sbjct: 67 ATSVFRFITNPSTFCFNTIIRICTLHEPSSLSSKRFFVEMRRRSVPPDFHTFPFVFKACA 126
Query: 256 --HLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCW 313
G L +H A+ GL S L+ +Y+ I+ ALQ+F + +D+ +
Sbjct: 127 AKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTY 186
Query: 314 NAIISGLALHGHGYAALKLFGYM 336
N +I GL A +LF M
Sbjct: 187 NVLIDGLVKAREIVRARELFDSM 209
>AT3G15130.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5097153-5099222 REVERSE
Length = 689
Score = 142 bits (357), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 93/348 (26%), Positives = 164/348 (47%), Gaps = 18/348 (5%)
Query: 2 PLLVCNCF--MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKA 59
PL+ F MP V W+ ++ H+L G+ + ++ + M G + +TF LKA
Sbjct: 57 PLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKA 116
Query: 60 AGKNCASRIGFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAW 119
G A G HG +K GF + V +L++MY +A K+F + + L++W
Sbjct: 117 CGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISW 176
Query: 120 NSMLDAYASNGEMEDAISLFHMMPLKDLS------SFNILISGYSSCGEVLAARSIFDKM 173
N+M+ + G A+ F MM ++ + L+ SS G + A + I +
Sbjct: 177 NAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFL 236
Query: 174 AIKDI------VSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSE 227
S++ + G + A F ++ K ISW++++ G Q G+F E
Sbjct: 237 VRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVE 296
Query: 228 AVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIY--SGLASSPHVTTAL 285
A+ LF ++ N D +S++ A L G ++ A+ SGL +S V ++
Sbjct: 297 AMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETS--VLNSV 354
Query: 286 MDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLF 333
+DMY KCG +++A + F + Q+KD+ W +I+G HG G ++++F
Sbjct: 355 VDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIF 402
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 152/295 (51%), Gaps = 12/295 (4%)
Query: 56 LLKAAGKNCASRIGFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKD 115
+L+ + S G H +K+G ++ LI+MY A K+F++MP ++
Sbjct: 12 ILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERN 71
Query: 116 LVAWNSMLDAYASNGEMEDAISLFHMMPLKDLSSFNILIS-GYSSCGEVLAARSIFD--- 171
+V+W++++ + NG+++ ++SLF M + + S +CG + A
Sbjct: 72 VVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHG 131
Query: 172 ---KMAIKDIVS-WNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSE 227
K+ + +V NS++ ++ G + +A +F+ + ++ ISWN M+AG + G S+
Sbjct: 132 FCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSK 191
Query: 228 AVDLFDEMKTTNC--LPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGL--ASSPHVTT 283
A+D F M+ N PD T TS+L AC+ G + G +IH + + SG SS +T
Sbjct: 192 ALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITG 251
Query: 284 ALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMKK 338
+L+D+Y KCG + A + F + + K + W+++I G A G A+ LF +++
Sbjct: 252 SLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQE 306
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 152/326 (46%), Gaps = 24/326 (7%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGF--RADNYTFPILLKAAGKNCASRIGFAFHGQ 75
WN +I + G +A+ T+ MQ R D +T LLKA G HG
Sbjct: 176 WNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGF 235
Query: 76 TIKTGFY--RHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEME 133
+++GF+ + +L+++Y A K F+ + K +++W+S++ YA GE
Sbjct: 236 LVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFV 295
Query: 134 DAISLFHMMPLKDLSSFNILISGY--SSCGEVLAARSIFDK------MAIK-----DIVS 180
+A+ LF K L N I + SS V A ++ + +A+K +
Sbjct: 296 EAMGLF-----KRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSV 350
Query: 181 WNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNC 240
NS++ + G +++A F EM +K+ ISW ++ G + G ++V +F EM N
Sbjct: 351 LNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNI 410
Query: 241 LPDYLTATSVLSACAHLGSLETGIKIHVYAIYS-GLASSPHVTTALMDMYAKCGSIEQAL 299
PD + +VLSAC+H G ++ G ++ + + G+ ++D+ + G +++A
Sbjct: 411 EPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAK 470
Query: 300 QIFFKAQVK-DIYCWNAIISGLALHG 324
+ +K ++ W ++S +HG
Sbjct: 471 HLIDTMPIKPNVGIWQTLLSLCRVHG 496
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 46/91 (50%)
Query: 248 TSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQV 307
S+L C G + G ++H Y + SG + + L+DMY KC A ++F
Sbjct: 10 VSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPE 69
Query: 308 KDIYCWNAIISGLALHGHGYAALKLFGYMKK 338
+++ W+A++SG L+G +L LF M +
Sbjct: 70 RNVVSWSALMSGHVLNGDLKGSLSLFSEMGR 100
>AT4G13650.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:7939611-7942898 REVERSE
Length = 1064
Score = 142 bits (357), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 157/328 (47%), Gaps = 10/328 (3%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTI 77
WN ++ + L+ + + + MQ+ + YT+P +LK + +G H Q I
Sbjct: 458 WNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQII 517
Query: 78 KTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAIS 137
KT F + +V + LI+MY L A + KD+V+W +M+ Y + A++
Sbjct: 518 KTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALT 577
Query: 138 LFHMMPLKDLSSFNI-LISGYSSC--------GEVLAARSIFDKMAIKDIVSWNSILSAC 188
F M + + S + L + S+C G+ + A++ + D+ N++++
Sbjct: 578 TFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFS-SDLPFQNALVTLY 636
Query: 189 TRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTAT 248
+R G +E+++ F++ + I+WN +++G Q G EA+ +F M + T
Sbjct: 637 SRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFG 696
Query: 249 SVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVK 308
S + A + +++ G ++H +G S V AL+ MYAKCGSI A + F + K
Sbjct: 697 SAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTK 756
Query: 309 DIYCWNAIISGLALHGHGYAALKLFGYM 336
+ WNAII+ + HG G AL F M
Sbjct: 757 NEVSWNAIINAYSKHGFGSEALDSFDQM 784
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 156/338 (46%), Gaps = 10/338 (2%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
M + +N +I G E+A+ + M + G D+ T L+ A + G
Sbjct: 349 MSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRG 408
Query: 70 FAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASN 129
H T K GF + ++ AL+N+Y A F V+++V WN ML AY
Sbjct: 409 QQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLL 468
Query: 130 GEMEDAISLFHMMPLKDLS----SFNILISGYSSCGEVLAARSIFDKMAIKDIVSWNS-- 183
++ ++ +F M ++++ ++ ++ G++ I ++ IK N+
Sbjct: 469 DDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQI-IKTNFQLNAYV 527
Query: 184 ---ILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNC 240
++ + G ++ A+ + K+ +SW TM+AG Q +A+ F +M
Sbjct: 528 CSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGI 587
Query: 241 LPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQ 300
D + T+ +SACA L +L+ G +IH A SG +S AL+ +Y++CG IE++
Sbjct: 588 RSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYL 647
Query: 301 IFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMKK 338
F + + D WNA++SG G+ AL++F M +
Sbjct: 648 AFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNR 685
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 144/321 (44%), Gaps = 12/321 (3%)
Query: 14 EVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFH 73
+V W +I + ++A+ T+ M G R+D + A A + G H
Sbjct: 555 DVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIH 614
Query: 74 GQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEME 133
Q +GF + Q AL+ +Y ++ FE D +AWN+++ + +G E
Sbjct: 615 AQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNE 674
Query: 134 DAISLFHMMPLKDLSSFNILI-SGYSSCGEVLAARSIFDKMAIKDIVSWNSILSACT--- 189
+A+ +F M + + + N S + E + A+ ++S C
Sbjct: 675 EALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALI 734
Query: 190 ----RAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYL 245
+ G + A F E+ KN +SWN ++ + G SEA+D FD+M +N P+++
Sbjct: 735 SMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHV 794
Query: 246 TATSVLSACAHLGSLETGIKIHVYAIYS--GLASSPHVTTALMDMYAKCGSIEQALQIFF 303
T VLSAC+H+G ++ GI + ++ S GL+ P ++DM + G + +A +
Sbjct: 795 TLVGVLSACSHIGLVDKGIA-YFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQ 853
Query: 304 KAQVK-DIYCWNAIISGLALH 323
+ +K D W ++S +H
Sbjct: 854 EMPIKPDALVWRTLLSACVVH 874
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 88/340 (25%), Positives = 157/340 (46%), Gaps = 15/340 (4%)
Query: 10 MPSLEVRRWNEIIKK---HMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKA-AGKNCA 65
MP + WN++IK+ L+G + +V M + TF +L+A G + A
Sbjct: 146 MPERTIFTWNKMIKELASRNLIG---EVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVA 202
Query: 66 SRIGFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDA 125
+ H + + G V LI++Y A ++F+ + +KD +W +M+
Sbjct: 203 FDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISG 262
Query: 126 YASNGEMEDAISLF-HMMPLKDLSSFNILISGYSSCG--EVLAARSIFDKMAIK-----D 177
+ N +AI LF M L + + S S+C E L + +K D
Sbjct: 263 LSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSD 322
Query: 178 IVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKT 237
N+++S G++ A +F M ++ +++NT++ G Q G +A++LF M
Sbjct: 323 TYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHL 382
Query: 238 TNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQ 297
PD T S++ AC+ G+L G ++H Y G AS+ + AL+++YAKC IE
Sbjct: 383 DGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIET 442
Query: 298 ALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMK 337
AL F + +V+++ WN ++ L + ++F M+
Sbjct: 443 ALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQ 482
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 148/311 (47%), Gaps = 18/311 (5%)
Query: 40 NMQVHGFRADNYTFPILLKAAGK-NCASRIGFAFHGQTIKTGFYRHIFVQTALINMY--- 95
+++ G R ++ T LL+ K N + G H Q +K G + + L + Y
Sbjct: 74 SVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFK 133
Query: 96 GTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMPLKDLSSFNILIS 155
G L+ A K+F+ MP + + WN M+ AS + + LF M ++++ S
Sbjct: 134 GDLY---GAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFS 190
Query: 156 GY-SSCG---------EVLAARSIFDKMAIKDIVSWNSILSACTRAGDMEKAFALFQEMP 205
G +C E + AR ++ + +V N ++ +R G ++ A +F +
Sbjct: 191 GVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVC-NPLIDLYSRNGFVDLARRVFDGLR 249
Query: 206 MKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIK 265
+K+ SW M++G + +EA+ LF +M +P +SVLSAC + SLE G +
Sbjct: 250 LKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQ 309
Query: 266 IHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGH 325
+H + G +S +V AL+ +Y G++ A IF +D +N +I+GL+ G+
Sbjct: 310 LHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGY 369
Query: 326 GYAALKLFGYM 336
G A++LF M
Sbjct: 370 GEKAMELFKRM 380
>AT3G49140.2 | Symbols: | EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885);
BEST Arabidopsis thaliana protein match is: EMB2758
(embryo defective 2758) (TAIR:AT4G33990.1). |
chr3:18213981-18217848 REVERSE
Length = 896
Score = 141 bits (356), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 98/339 (28%), Positives = 156/339 (46%), Gaps = 52/339 (15%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHG-------------FRADNYTFPILLKAAGKNC 64
++EI ++++++ N + +YVN +G R D+YTFP +LKA +
Sbjct: 97 FDEIPERNVIIINV--MIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSG 154
Query: 65 ASRIGFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLD 124
IG HG K G +FV L++MYG ++A + + M +D+V+WNS++
Sbjct: 155 TIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVV 214
Query: 125 AYASNGEMEDAISLFHMMP----LKDLSSFNILISGYS--SCGEVLAARSIFDKMAIKDI 178
YA N +DA+ + M D + L+ S + V+ + +F KM K +
Sbjct: 215 GYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSL 274
Query: 179 VSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTT 238
VSWN ++ MKN + EAV+L+ M+
Sbjct: 275 VSWNVMIGVY-----------------MKNAMPV--------------EAVELYSRMEAD 303
Query: 239 NCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQA 298
PD ++ TSVL AC +L G KIH Y L + + AL+DMYAKCG +E+A
Sbjct: 304 GFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKA 363
Query: 299 LQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMK 337
+F + +D+ W A+IS G G A+ LF ++
Sbjct: 364 RDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQ 402
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 98/212 (46%), Gaps = 10/212 (4%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTI 77
WN +I +M +AV Y M+ GF D + +L A G A +G HG
Sbjct: 277 WNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIE 336
Query: 78 KTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAIS 137
+ ++ ++ ALI+MY C A +FENM +D+V+W +M+ AY +G DA++
Sbjct: 337 RKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVA 396
Query: 138 LFHMMP----LKDLSSFNILISGYSSCGEVLAARSIFDKMAIKDIVSWNSILSACT---- 189
LF + + D +F ++ S G + RS F M ++ AC
Sbjct: 397 LFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLL 456
Query: 190 -RAGDMEKAFALFQEMPMK-NTISWNTMLAGC 219
RAG +++A+ Q+M M+ N W +L C
Sbjct: 457 GRAGKVKEAYRFIQDMSMEPNERVWGALLGAC 488
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 91/180 (50%), Gaps = 4/180 (2%)
Query: 162 EVLAARSIFDKMAIKDIVSWNSILSACTRA----GDMEKAFALFQEMPMKNTISWNTMLA 217
++ R++ ++ ++D+ +S+ RA D+ A +F E+P +N I N M+
Sbjct: 54 DIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIR 113
Query: 218 GCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLAS 277
+ G + E V +F M N PD+ T VL AC+ G++ G KIH A GL+S
Sbjct: 114 SYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSS 173
Query: 278 SPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMK 337
+ V L+ MY KCG + +A + + +D+ WN+++ G A + AL++ M+
Sbjct: 174 TLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREME 233
>AT4G14050.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:8103645-8105483 REVERSE
Length = 612
Score = 141 bits (356), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 155/321 (48%), Gaps = 41/321 (12%)
Query: 57 LKAAGKNCASRIGFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDL 116
L+ +N A H +K G + + L+N+YG + A ++F+ MP +D
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 117 VAWNSMLDAY------------------------------------ASNGEMEDAISLFH 140
+AW S+L A A+ G ++ +
Sbjct: 70 IAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHC 129
Query: 141 MMPLKDLSSFNI----LISGYSSCGEVLAARSIFDKMAIKDIVSWNSILSACTRAGDMEK 196
+ + ++ + L+ Y+ CG + +A+++FD + +K+ +SW +++S ++G E+
Sbjct: 130 HFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEE 189
Query: 197 AFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNC-LPDYLTATSVLSACA 255
A LF+ +P+KN SW +++G +Q G+ EA +F EM+ + D L +S++ ACA
Sbjct: 190 ALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACA 249
Query: 256 HLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNA 315
+L + G ++H I G S ++ AL+DMYAKC + A IF + + +D+ W +
Sbjct: 250 NLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTS 309
Query: 316 IISGLALHGHGYAALKLFGYM 336
+I G+A HG AL L+ M
Sbjct: 310 LIVGMAQHGQAEKALALYDDM 330
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 154/333 (46%), Gaps = 42/333 (12%)
Query: 46 FRADNYTFPILLKAAGKNCASRIGFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADAC 105
R D++ F L+KA + G H I + + V+++L++MY A
Sbjct: 101 LRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAK 160
Query: 106 KMFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMPLKDLSSFNILISGYSSCGEVLA 165
+F+++ VK+ ++W +M+ YA +G E+A+ LF ++P+K+L S+ LISG+ G+ L
Sbjct: 161 AVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLE 220
Query: 166 ARSIFDKMA-----IKDIVSWNSILSAC-------------------------------- 188
A S+F +M I D + +SI+ AC
Sbjct: 221 AFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALI 280
Query: 189 ---TRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYL 245
+ D+ A +F M ++ +SW +++ G Q GQ +A+ L+D+M + P+ +
Sbjct: 281 DMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEV 340
Query: 246 TATSVLSACAHLGSLETGIKIHVYAIYS-GLASSPHVTTALMDMYAKCGSIEQALQIFFK 304
T ++ AC+H+G +E G ++ G+ S T L+D+ + G +++A +
Sbjct: 341 TFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHT 400
Query: 305 AQV-KDIYCWNAIISGLALHGHGYAALKLFGYM 336
D W A++S G G +++ ++
Sbjct: 401 MPFPPDEPTWAALLSACKRQGRGQMGIRIADHL 433
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 94/189 (49%), Gaps = 32/189 (16%)
Query: 182 NSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCL 241
N++++ + G A +F EMP ++ I+W ++L Q + + +F + +++ L
Sbjct: 42 NTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGL 101
Query: 242 -PDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSI----- 295
PD ++++ ACA+LGS++ G ++H + I S A+ V ++L+DMYAKCG +
Sbjct: 102 RPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKA 161
Query: 296 --------------------------EQALQIFFKAQVKDIYCWNAIISGLALHGHGYAA 329
E+AL++F VK++Y W A+ISG G G A
Sbjct: 162 VFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEA 221
Query: 330 LKLFGYMKK 338
+F M++
Sbjct: 222 FSVFTEMRR 230
>AT3G25060.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:9128516-9130321 FORWARD
Length = 601
Score = 141 bits (356), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 159/332 (47%), Gaps = 9/332 (2%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
+P V +N +I + N ++ + Y M + D+ TF + +KA G
Sbjct: 76 LPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKG 135
Query: 70 FAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASN 129
A + + G+ +FV ++++N+Y +A +F M +D++ W +M+ +A
Sbjct: 136 EAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQA 195
Query: 130 GEMEDAISLFHMMPLKDLSSFNILISGY----SSCGEVLAARSI----FDKMAIKDIVSW 181
G+ A+ + M + +++ G G+ RS+ + ++V
Sbjct: 196 GKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVE 255
Query: 182 NSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCL 241
S++ + G +E A +F M K +SW ++++G Q G ++A + EM++
Sbjct: 256 TSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQ 315
Query: 242 PDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQI 301
PD +T VL AC+ +GSL+TG +H Y + + TALMDMY+KCG++ + +I
Sbjct: 316 PDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHVLDRV-TATALMDMYSKCGALSSSREI 374
Query: 302 FFKAQVKDIYCWNAIISGLALHGHGYAALKLF 333
F KD+ CWN +IS +HG+G + LF
Sbjct: 375 FEHVGRKDLVCWNTMISCYGIHGNGQEVVSLF 406
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 157/327 (48%), Gaps = 17/327 (5%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
M +V W ++ G + +AV Y MQ GF D LL+A+G +++G
Sbjct: 177 MAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMG 236
Query: 70 FAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASN 129
+ HG +TG ++ V+T+L++MY + A ++F M K V+W S++ +A N
Sbjct: 237 RSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQN 296
Query: 130 GEMEDAI-SLFHMMPL---KDLSSFNILISGYSSCGEVLAARSI---FDKMAIKDIVSWN 182
G A ++ M L DL + ++ S G + R + K + D V+
Sbjct: 297 GLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHVLDRVTAT 356
Query: 183 SILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLP 242
+++ ++ G + + +F+ + K+ + WNTM++ G E V LF +M +N P
Sbjct: 357 ALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEP 416
Query: 243 DYLTATSVLSACAHLGSLETG-----IKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQ 297
D+ T S+LSA +H G +E G + I+ Y I S H L+D+ A+ G +E+
Sbjct: 417 DHATFASLLSALSHSGLVEQGQHWFSVMINKYKIQ---PSEKHY-VCLIDLLARAGRVEE 472
Query: 298 ALQIFFKAQVKD-IYCWNAIISGLALH 323
AL + ++ + + W A++SG H
Sbjct: 473 ALDMINSEKLDNALPIWVALLSGCINH 499
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 123/247 (49%), Gaps = 10/247 (4%)
Query: 87 VQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMPLK- 145
+ LI G + + A K+F+ +P + + +NSM+ Y+ ++ + L+ M +
Sbjct: 52 ISRDLIASCGRIGEISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEK 111
Query: 146 ---DLSSFNILISGYSSC-----GEVLAARSIFDKMAIKDIVSWNSILSACTRAGDMEKA 197
D S+F + I S GE + +++ D D+ +S+L+ + G M++A
Sbjct: 112 IQPDSSTFTMTIKACLSGLVLEKGEAVWCKAV-DFGYKNDVFVCSSVLNLYMKCGKMDEA 170
Query: 198 FALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHL 257
LF +M ++ I W TM+ G Q G+ +AV+ + EM+ D + +L A L
Sbjct: 171 EVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDL 230
Query: 258 GSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAII 317
G + G +H Y +GL + V T+L+DMYAK G IE A ++F + K W ++I
Sbjct: 231 GDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLI 290
Query: 318 SGLALHG 324
SG A +G
Sbjct: 291 SGFAQNG 297
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 79/156 (50%)
Query: 182 NSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCL 241
++++C R G++ A +F E+P + +N+M+ + E + L+D+M
Sbjct: 54 RDLIASCGRIGEISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQ 113
Query: 242 PDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQI 301
PD T T + AC LE G + A+ G + V ++++++Y KCG +++A +
Sbjct: 114 PDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVL 173
Query: 302 FFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMK 337
F K +D+ CW +++G A G A++ + M+
Sbjct: 174 FGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQ 209
>AT3G49140.1 | Symbols: | EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885);
BEST Arabidopsis thaliana protein match is: EMB2758
(embryo defective 2758) (TAIR:AT4G33990.1); Has 45368
Blast hits to 16108 proteins in 635 species: Archae -
60; Bacteria - 10333; Metazoa - 8211; Fungi - 3499;
Plants - 14806; Viruses - 492; Other Eukaryotes - 7967
(source: NCBI BLink). | chr3:18212187-18217848 REVERSE
Length = 1215
Score = 141 bits (356), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 98/339 (28%), Positives = 156/339 (46%), Gaps = 52/339 (15%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHG-------------FRADNYTFPILLKAAGKNC 64
++EI ++++++ N + +YVN +G R D+YTFP +LKA +
Sbjct: 97 FDEIPERNVIIINV--MIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSG 154
Query: 65 ASRIGFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLD 124
IG HG K G +FV L++MYG ++A + + M +D+V+WNS++
Sbjct: 155 TIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVV 214
Query: 125 AYASNGEMEDAISLFHMMP----LKDLSSFNILISGYS--SCGEVLAARSIFDKMAIKDI 178
YA N +DA+ + M D + L+ S + V+ + +F KM K +
Sbjct: 215 GYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSL 274
Query: 179 VSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTT 238
VSWN ++ MKN + EAV+L+ M+
Sbjct: 275 VSWNVMIGVY-----------------MKNAMPV--------------EAVELYSRMEAD 303
Query: 239 NCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQA 298
PD ++ TSVL AC +L G KIH Y L + + AL+DMYAKCG +E+A
Sbjct: 304 GFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKA 363
Query: 299 LQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMK 337
+F + +D+ W A+IS G G A+ LF ++
Sbjct: 364 RDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQ 402
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 98/212 (46%), Gaps = 10/212 (4%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTI 77
WN +I +M +AV Y M+ GF D + +L A G A +G HG
Sbjct: 277 WNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIE 336
Query: 78 KTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAIS 137
+ ++ ++ ALI+MY C A +FENM +D+V+W +M+ AY +G DA++
Sbjct: 337 RKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVA 396
Query: 138 LFHMMP----LKDLSSFNILISGYSSCGEVLAARSIFDKMAIKDIVSWNSILSACT---- 189
LF + + D +F ++ S G + RS F M ++ AC
Sbjct: 397 LFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLL 456
Query: 190 -RAGDMEKAFALFQEMPMK-NTISWNTMLAGC 219
RAG +++A+ Q+M M+ N W +L C
Sbjct: 457 GRAGKVKEAYRFIQDMSMEPNERVWGALLGAC 488
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 91/180 (50%), Gaps = 4/180 (2%)
Query: 162 EVLAARSIFDKMAIKDIVSWNSILSACTRA----GDMEKAFALFQEMPMKNTISWNTMLA 217
++ R++ ++ ++D+ +S+ RA D+ A +F E+P +N I N M+
Sbjct: 54 DIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIR 113
Query: 218 GCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLAS 277
+ G + E V +F M N PD+ T VL AC+ G++ G KIH A GL+S
Sbjct: 114 SYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSS 173
Query: 278 SPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMK 337
+ V L+ MY KCG + +A + + +D+ WN+++ G A + AL++ M+
Sbjct: 174 TLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREME 233
>AT3G22690.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:8020757-8024534 REVERSE
Length = 978
Score = 141 bits (356), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 94/341 (27%), Positives = 166/341 (48%), Gaps = 18/341 (5%)
Query: 8 CFMPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASR 67
CFM +N +I+ + G +A+L ++ M G D YTFP L A K+ A
Sbjct: 99 CFM-------YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKG 151
Query: 68 IGFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYA 127
G HG +K G+ + +FVQ +L++ Y A K+F+ M +++V+W SM+ YA
Sbjct: 152 NGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYA 211
Query: 128 SNGEMEDAISLFHMMPLKDLSSFN--ILISGYSSC--------GEVLAARSIFDKMAIKD 177
+DA+ LF M + + N ++ S+C GE + A + + D
Sbjct: 212 RRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVND 271
Query: 178 IVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKT 237
++ ++++ + ++ A LF E N N M + +++G EA+ +F+ M
Sbjct: 272 LMV-SALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMD 330
Query: 238 TNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQ 297
+ PD ++ S +S+C+ L ++ G H Y + +G S ++ AL+DMY KC +
Sbjct: 331 SGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDT 390
Query: 298 ALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMKK 338
A +IF + K + WN+I++G +G AA + F M +
Sbjct: 391 AFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPE 431
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 146/298 (48%), Gaps = 40/298 (13%)
Query: 79 TGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAISL 138
+G + + +AL++MY + A ++F+ +L N+M Y G +A+ +
Sbjct: 265 SGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGV 324
Query: 139 FHMM------P-----LKDLSSF----------------------------NILISGYSS 159
F++M P L +SS N LI Y
Sbjct: 325 FNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMK 384
Query: 160 CGEVLAARSIFDKMAIKDIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGC 219
C A IFD+M+ K +V+WNSI++ G+++ A+ F+ MP KN +SWNT+++G
Sbjct: 385 CHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGL 444
Query: 220 LQRGQFSEAVDLFDEMKTTNCL-PDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASS 278
+Q F EA+++F M++ + D +T S+ SAC HLG+L+ I+ Y +G+
Sbjct: 445 VQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLD 504
Query: 279 PHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYM 336
+ T L+DM+++CG E A+ IF +D+ W A I +A+ G+ A++LF M
Sbjct: 505 VRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDM 562
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/362 (24%), Positives = 154/362 (42%), Gaps = 50/362 (13%)
Query: 19 NEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTIK 78
N + ++ G +A+ + M G R D + + + + G + HG ++
Sbjct: 306 NAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLR 365
Query: 79 TGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAISL 138
GF + ALI+MY H A ++F+ M K +V WNS++ Y NGE++ A
Sbjct: 366 NGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWET 425
Query: 139 FHMMPLKDLSSFNILISGYSSCGEVLAARSIFDKMAIK-----DIVSWNSILSAC----- 188
F MP K++ S+N +ISG A +F M + D V+ SI SAC
Sbjct: 426 FETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGA 485
Query: 189 ------------------------------TRAGDMEKAFALFQEMPMKNTISWNTMLAG 218
+R GD E A ++F + ++ +W +
Sbjct: 486 LDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGA 545
Query: 219 CLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASS 278
G A++LFD+M PD + L+AC+H G ++ G +I Y++ S
Sbjct: 546 MAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEI-FYSMLKLHGVS 604
Query: 279 PHVT--TALMDMYAKCGSIEQALQIF--FKAQVKDIYCWNAIISGLALHGH----GYAAL 330
P ++D+ + G +E+A+Q+ + D+ WN++++ + G+ YAA
Sbjct: 605 PEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVI-WNSLLAACRVQGNVEMAAYAAE 663
Query: 331 KL 332
K+
Sbjct: 664 KI 665
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 100/230 (43%), Gaps = 11/230 (4%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVH-GFRADNYTFPILLKAAGKNCASRI 68
MP + WN II + E+A+ + +MQ G AD T + A G A +
Sbjct: 429 MPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDL 488
Query: 69 GFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYAS 128
+ K G + + T L++M+ A +F ++ +D+ AW + + A A
Sbjct: 489 AKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAM 548
Query: 129 NGEMEDAISLFHMMPLKDLSSFNI-LISGYSSC---GEVLAARSIFDKMAIKDIVSWNSI 184
G E AI LF M + L + + ++C G V + IF M VS +
Sbjct: 549 AGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDV 608
Query: 185 LSACT-----RAGDMEKAFALFQEMPMK-NTISWNTMLAGCLQRGQFSEA 228
C RAG +E+A L ++MPM+ N + WN++LA C +G A
Sbjct: 609 HYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMA 658
>AT5G47460.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:19252463-19254193 REVERSE
Length = 576
Score = 140 bits (354), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 103/365 (28%), Positives = 160/365 (43%), Gaps = 71/365 (19%)
Query: 45 GFRADNYTFPILLKAAGKNCASRIGFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADA 104
G + D LL+ +G + HG K GF + + +L+ Y T DA
Sbjct: 50 GEKPDASPLVHLLRVSGNYGYVSLCRQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDA 109
Query: 105 CKMFENMPVKDLVAWNSMLDAYASNGEMEDAISLF------------------------- 139
K+F+ MP D+++WNS++ Y +G ++ I LF
Sbjct: 110 HKVFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARL 169
Query: 140 HMMPLK---------------DLSSFNILISGYSSCGEVLAARSIFDKMAIKDIVSWNSI 184
H+ PL ++ N LI Y CG + A +F M KD VSWN+I
Sbjct: 170 HLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAI 229
Query: 185 LSACTR-------------------------------AGDMEKAFALFQEMPMKNTISWN 213
+++C+R +GD AF + +MP N+ SWN
Sbjct: 230 VASCSRNGKLELGLWFFHQMPNPDTVTYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWN 289
Query: 214 TMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYS 273
T+L G + + EA + F +M ++ D + + VL+A A L + G IH A
Sbjct: 290 TILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKL 349
Query: 274 GLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLF 333
GL S V +AL+DMY+KCG ++ A +F+ K++ WN +ISG A +G A+KLF
Sbjct: 350 GLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLF 409
Query: 334 GYMKK 338
+K+
Sbjct: 410 NQLKQ 414
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 110/227 (48%), Gaps = 8/227 (3%)
Query: 118 AWNSMLDA---YASNGEMEDAISLFHMMPLKDLSSFNILISGYSSCGEVLAARSIFDKMA 174
+W++++ A + S G + A+ L + D S L+ + G V R + +
Sbjct: 23 SWSTIVPALARFGSIGVLRAAVELINDGEKPDASPLVHLLRVSGNYGYVSLCRQLHGYVT 82
Query: 175 IKDIVS----WNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVD 230
VS NS++ + +E A +F EMP + ISWN++++G +Q G+F E +
Sbjct: 83 KHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGIC 142
Query: 231 LFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVT-TALMDMY 289
LF E+ ++ P+ + T+ L+ACA L G IH + GL V L+DMY
Sbjct: 143 LFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMY 202
Query: 290 AKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYM 336
KCG ++ A+ +F + KD WNAI++ + +G L F M
Sbjct: 203 GKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQM 249
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 98/231 (42%), Gaps = 12/231 (5%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
MP+ WN I+ ++ + +A + M G R D Y+ I+L A G
Sbjct: 280 MPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWG 339
Query: 70 FAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASN 129
H K G + V +ALI+MY A MF MP K+L+ WN M+ YA N
Sbjct: 340 SLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGYARN 399
Query: 130 GEMEDAISLFHMMPLK-----DLSSFNILISGYSSCGEVLAARSIFDKMAIKDIVSWNSI 184
G+ +AI LF+ + + D +F L++ S C + + +M I + S+
Sbjct: 400 GDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCSHCEVPMEVMLGYFEMMINEYRIKPSV 459
Query: 185 LSACT------RAGDMEKAFALFQEMPMK-NTISWNTMLAGCLQRGQFSEA 228
C+ + G++ +A + QE + ++W +L C R A
Sbjct: 460 EHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDGVAWRALLGACSARKDLKAA 510
>AT3G57430.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:21255731-21258403 REVERSE
Length = 890
Score = 140 bits (354), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 97/337 (28%), Positives = 166/337 (49%), Gaps = 20/337 (5%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTI 77
W ++++ + +AVLTYV+M V G + DNY FP LLKA +G H
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 78 KTGF-YRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAI 136
K G+ + V L+N+Y K+F+ + ++ V+WNS++ + S + E A+
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 137 SLFHMMPLKDL--SSFNILISGYSSCGEVLAARSIFDKMAIKDIVSW------------N 182
F M +++ SSF L+S ++C + + M K + ++ N
Sbjct: 185 EAFRCMLDENVEPSSFT-LVSVVTACSNLPMPEGL---MMGKQVHAYGLRKGELNSFIIN 240
Query: 183 SILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLP 242
++++ + G + + L ++ ++WNT+L+ Q Q EA++ EM P
Sbjct: 241 TLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEP 300
Query: 243 DYLTATSVLSACAHLGSLETGIKIHVYAIYSG-LASSPHVTTALMDMYAKCGSIEQALQI 301
D T +SVL AC+HL L TG ++H YA+ +G L + V +AL+DMY C + ++
Sbjct: 301 DEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRV 360
Query: 302 FFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMKK 338
F + I WNA+I+G + + H AL LF M++
Sbjct: 361 FDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEE 397
Score = 128 bits (321), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 160/344 (46%), Gaps = 29/344 (8%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTI 77
WN ++ +A+ M + G D +T +L A R G H +
Sbjct: 270 WNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYAL 329
Query: 78 KTG-FYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAI 136
K G + FV +AL++MY ++F+ M + + WN+M+ Y+ N ++A+
Sbjct: 330 KNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEAL 389
Query: 137 SLFHMMPLKDLSSFNILISGYSSCGEVLA-ARS------------IFDKMAIKDIVSWNS 183
LF M S +L + + G V A RS + + +D N+
Sbjct: 390 LLFIGME----ESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNT 445
Query: 184 ILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKT------ 237
++ +R G ++ A +F +M ++ ++WNTM+ G + +A+ L +M+
Sbjct: 446 LMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVS 505
Query: 238 -----TNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKC 292
+ P+ +T ++L +CA L +L G +IH YAI + LA+ V +AL+DMYAKC
Sbjct: 506 KGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKC 565
Query: 293 GSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYM 336
G ++ + ++F + K++ WN II +HG+G A+ L M
Sbjct: 566 GCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMM 609
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 157/332 (47%), Gaps = 25/332 (7%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVH-GFRADNYTFPILLKAAGKNCASRIGFAFHGQT 76
WN +I + + ++A+L ++ M+ G A++ T ++ A ++ A A HG
Sbjct: 372 WNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFV 431
Query: 77 IKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAI 136
+K G R FVQ L++MY L A ++F M +DLV WN+M+ Y + EDA+
Sbjct: 432 VKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDAL 491
Query: 137 SLFHMMP------LKDLSSFNI------LISGYSSC--------GEVLAARSIFDKMAIK 176
L H M K S ++ L++ SC G+ + A +I + +A
Sbjct: 492 LLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLAT- 550
Query: 177 DIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMK 236
D+ ++++ + G ++ + +F ++P KN I+WN ++ G EA+DL M
Sbjct: 551 DVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMM 610
Query: 237 TTNCLPDYLTATSVLSACAHLGSLETGIKI-HVYAIYSGLASSPHVTTALMDMYAKCGSI 295
P+ +T SV +AC+H G ++ G++I +V G+ S ++D+ + G I
Sbjct: 611 VQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRI 670
Query: 296 EQALQI--FFKAQVKDIYCWNAIISGLALHGH 325
++A Q+ W++++ +H +
Sbjct: 671 KEAYQLMNMMPRDFNKAGAWSSLLGASRIHNN 702
>AT1G25360.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:8894428-8896800 FORWARD
Length = 790
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 107/385 (27%), Positives = 163/385 (42%), Gaps = 85/385 (22%)
Query: 34 AVLTYVNMQVHGFRADNYTFPILLKAAG------KNCASRIGFAFHGQTIKTGFYRHIFV 87
A+ + M+ GF+ DN+TF +L K C FH +K+G V
Sbjct: 132 AINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQ-----FHAAALKSGAGYITSV 186
Query: 88 QTALINMYGTLHCTAD----ACKMFENMPVKD---------------------------- 115
AL+++Y + A K+F+ + KD
Sbjct: 187 SNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMD 246
Query: 116 ----LVAWNSMLDAYASNGEMEDAISLFHMMPLK--DLSSF------------------- 150
LVA+N+M+ Y + G ++A+ + M +L F
Sbjct: 247 DNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGK 306
Query: 151 -----------------NILISGYSSCGEVLAARSIFDKMAIKDIVSWNSILSACTRAGD 193
N L+S Y CG+ AR+IF+KM KD+VSWN++LS +G
Sbjct: 307 QVHAYVLRREDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGH 366
Query: 194 MEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSA 253
+ +A +F+EM KN +SW M++G + G E + LF MK P + + +
Sbjct: 367 IGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKS 426
Query: 254 CAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCW 313
CA LG+ G + H + G SS AL+ MYAKCG +E+A Q+F D W
Sbjct: 427 CAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSW 486
Query: 314 NAIISGLALHGHGYAALKLFGYMKK 338
NA+I+ L HGHG A+ ++ M K
Sbjct: 487 NALIAALGQHGHGAEAVDVYEEMLK 511
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 94/367 (25%), Positives = 169/367 (46%), Gaps = 48/367 (13%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTI 77
+N +I ++ G ++A+ M G D +T+P +++A ++G H +
Sbjct: 254 YNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVL 313
Query: 78 KTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAIS 137
+ + F +L+++Y +A +FE MP KDLV+WN++L Y S+G + +A
Sbjct: 314 RREDFSFHF-DNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKL 372
Query: 138 LFHMMPLKDLSSFNILISGYSSCGEVLAARSIFDKM--------------AIKD------ 177
+F M K++ S+ I+ISG + G +F M AIK
Sbjct: 373 IFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGA 432
Query: 178 -------------------IVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAG 218
+ + N++++ + G +E+A +F+ MP +++SWN ++A
Sbjct: 433 YCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAA 492
Query: 219 CLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKI--HVYAIYSGLA 276
Q G +EAVD+++EM PD +T +VL+AC+H G ++ G K + +Y
Sbjct: 493 LGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPP 552
Query: 277 SSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDI-YCWNAIISGLALHGHG----YAALK 331
+ H L+D+ + G A + K W A++SG +HG+ AA K
Sbjct: 553 GADHYAR-LIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADK 611
Query: 332 LFGYMKK 338
LFG + +
Sbjct: 612 LFGLIPE 618
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 87/369 (23%), Positives = 150/369 (40%), Gaps = 79/369 (21%)
Query: 48 ADNYTFPILLKAAGKNCASRIGFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKM 107
A+ Y + L + + ++ A HG I GF + LI++Y A ++
Sbjct: 12 ANRYAANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQL 71
Query: 108 FENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMP--LKDLSSFNILISGYSSCGEVLA 165
F+ + D +A +M+ Y ++G++ A +F P ++D +N +I+G+S + +
Sbjct: 72 FDEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYS 131
Query: 166 ARSIFDKMAIK----DIVSWNSILSACTRAGDMEK------------------------- 196
A ++F KM + D ++ S+L+ D EK
Sbjct: 132 AINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALV 191
Query: 197 ---------------AFALFQEMPMKNTISWNTMLAGCLQ-------------------- 221
A +F E+ K+ SW TM+ G ++
Sbjct: 192 SVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKL 251
Query: 222 ------------RGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVY 269
RG + EA+++ M ++ D T SV+ ACA G L+ G ++H Y
Sbjct: 252 VAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAY 311
Query: 270 AIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAA 329
+ S H +L+ +Y KCG ++A IF K KD+ WNA++SG GH A
Sbjct: 312 VLRRE-DFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEA 370
Query: 330 LKLFGYMKK 338
+F MK+
Sbjct: 371 KLIFKEMKE 379
>AT5G09950.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3102877-3105864 REVERSE
Length = 995
Score = 140 bits (352), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 95/341 (27%), Positives = 172/341 (50%), Gaps = 14/341 (4%)
Query: 9 FMPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRI 68
FM + WN +I G +AV Y +M+ H ++T L + +++
Sbjct: 374 FMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKL 433
Query: 69 GFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYA- 127
G HG+++K G ++ V AL+ +Y + K+F +MP D V+WNS++ A A
Sbjct: 434 GQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALAR 493
Query: 128 SNGEMEDAISLFHMMPLKDLSSFNILI----------SGYSSCGEVLAARSIFDKMAIKD 177
S + +A+ F + + N + + G+ + ++ + +A +
Sbjct: 494 SERSLPEAVVCF-LNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIA-DE 551
Query: 178 IVSWNSILSACTRAGDMEKAFALFQEM-PMKNTISWNTMLAGCLQRGQFSEAVDLFDEMK 236
+ N++++ + G+M+ +F M ++ ++WN+M++G + ++A+DL M
Sbjct: 552 ATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFML 611
Query: 237 TTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIE 296
T D +VLSA A + +LE G+++H ++ + L S V +AL+DMY+KCG ++
Sbjct: 612 QTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLD 671
Query: 297 QALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMK 337
AL+ F V++ Y WN++ISG A HG G ALKLF MK
Sbjct: 672 YALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMK 712
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/335 (28%), Positives = 154/335 (45%), Gaps = 24/335 (7%)
Query: 8 CFMPSLEVRR---WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNC 64
C +EV+ WN II + G+ A + +MQ G R YTF L+ A C
Sbjct: 161 CAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTA---C 217
Query: 65 A-----SRIGFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAW 119
+ R+ K+G +FV + L++ + + A K+F M ++ V
Sbjct: 218 SLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTL 277
Query: 120 NSMLDAYASNGEMEDAISLF-HMMPLKDLS--SFNILISG---YSSCGEV--LAARSIFD 171
N ++ E+A LF M + D+S S+ IL+S YS EV R +
Sbjct: 278 NGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHG 337
Query: 172 KMAIKDIVSW-----NSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFS 226
+ +V + N +++ + G + A +F M K+++SWN+M+ G Q G F
Sbjct: 338 HVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFI 397
Query: 227 EAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALM 286
EAV+ + M+ + LP T S LS+CA L + G +IH ++ G+ + V+ ALM
Sbjct: 398 EAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALM 457
Query: 287 DMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLA 321
+YA+ G + + +IF D WN+II LA
Sbjct: 458 TLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALA 492
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/327 (27%), Positives = 153/327 (46%), Gaps = 25/327 (7%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNA-EQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRI 68
MP + WN II + +AV+ ++N Q G + + TF +L A +
Sbjct: 476 MPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGEL 535
Query: 69 GFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADAC-KMFENM-PVKDLVAWNSMLDAY 126
G HG +K + ALI YG D C K+F M +D V WNSM+ Y
Sbjct: 536 GKQIHGLALKNNIADEATTENALIACYGKCG-EMDGCEKIFSRMAERRDNVTWNSMISGY 594
Query: 127 ASNGEMEDAISL--FHMMPLKDLSSF--NILISGYSSCG------EVLA--ARSIFDKMA 174
N + A+ L F + + L SF ++S ++S EV A R+ +
Sbjct: 595 IHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLES-- 652
Query: 175 IKDIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDE 234
D+V ++++ ++ G ++ A F MP++N+ SWN+M++G + GQ EA+ LF+
Sbjct: 653 --DVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFET 710
Query: 235 MK-TTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVT--TALMDMYAK 291
MK PD++T VLSAC+H G LE G K H ++ +P + + + D+ +
Sbjct: 711 MKLDGQTPPDHVTFVGVLSACSHAGLLEEGFK-HFESMSDSYGLAPRIEHFSCMADVLGR 769
Query: 292 CGSIEQALQIFFKAQVK-DIYCWNAII 317
G +++ K +K ++ W ++
Sbjct: 770 AGELDKLEDFIEKMPMKPNVLIWRTVL 796
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 84/357 (23%), Positives = 160/357 (44%), Gaps = 38/357 (10%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRI- 68
MP W I+ + G ++A++ +M G ++ Y F +L+A + + I
Sbjct: 62 MPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGIL 121
Query: 69 -GFAFHGQTIKTGFYRHIFVQTALINMY-GTLHCTADACKMFENMPVKDLVAWNSMLDAY 126
G HG K + V LI+MY + A F ++ VK+ V+WNS++ Y
Sbjct: 122 FGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVY 181
Query: 127 ASNGEMEDAISLFHMMPLKDLS----SFNILISGYSSCGEVLAARSIFDKMA-------- 174
+ G+ A +F M +F L++ ++C + +++
Sbjct: 182 SQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVT--TACSLTEPDVRLLEQIMCTIQKSGL 239
Query: 175 IKDIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDE 234
+ D+ + ++SA ++G + A +F +M +N ++ N ++ G +++ EA LF +
Sbjct: 240 LTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMD 299
Query: 235 MKTT------------NCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLAS-SPHV 281
M + + P+Y A V L+ G ++H + I +GL +
Sbjct: 300 MNSMIDVSPESYVILLSSFPEYSLAEEV--------GLKKGREVHGHVITTGLVDFMVGI 351
Query: 282 TTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMKK 338
L++MYAKCGSI A ++F+ KD WN++I+GL +G A++ + M++
Sbjct: 352 GNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRR 408
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 135/288 (46%), Gaps = 17/288 (5%)
Query: 62 KNCASRIGFA--FHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAW 119
++C G A FH + K + +++ LIN Y + A K+F+ MP+++ V+W
Sbjct: 11 QSCVGHRGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSW 70
Query: 120 NSMLDAYASNGEMEDAISLFHMMPLKDL-SSFNILISGYSSCGEVLAARSIFDKM----- 173
++ Y+ NGE ++A+ M + + S+ +S +C E+ + +F +
Sbjct: 71 ACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLM 130
Query: 174 -----AIKDIVSWNSILSACTRA-GDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSE 227
A+ +VS N ++S + G + A F ++ +KN++SWN++++ Q G
Sbjct: 131 FKLSYAVDAVVS-NVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRS 189
Query: 228 AVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGI--KIHVYAIYSGLASSPHVTTAL 285
A +F M+ P T S+++ L + + +I SGL + V + L
Sbjct: 190 AFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGL 249
Query: 286 MDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLF 333
+ +AK GS+ A ++F + + ++ N ++ GL G A KLF
Sbjct: 250 VSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLF 297
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 83/165 (50%), Gaps = 3/165 (1%)
Query: 176 KDIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEM 235
KD+ N++++A GD A +F EMP++N +SW +++G + G+ EA+ +M
Sbjct: 34 KDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDM 93
Query: 236 KTTNCLPDYLTATSVLSACAHLGSLET--GIKIHVYAIYSGLASSPHVTTALMDMYAKC- 292
+ SVL AC +GS+ G +IH A V+ L+ MY KC
Sbjct: 94 VKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCI 153
Query: 293 GSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMK 337
GS+ AL F +VK+ WN+IIS + G +A ++F M+
Sbjct: 154 GSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQ 198
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 130/330 (39%), Gaps = 44/330 (13%)
Query: 6 CNCFMPSLEVRR----WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAG 61
C + RR WN +I ++ +A+ M G R D++ + +L A
Sbjct: 571 CEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFA 630
Query: 62 KNCASRIGFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNS 121
G H +++ + V +AL++MY A + F MPV++ +WNS
Sbjct: 631 SVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNS 690
Query: 122 MLDAYASNGEMEDAISLFHMMPLKDLSSFNILISGYSSCGEVLAARSIFDKMAIKDIVSW 181
M+ YA +G+ E+A+ LF M L D D V++
Sbjct: 691 MISGYARHGQGEEALKLFETMKL--------------------------DGQTPPDHVTF 724
Query: 182 NSILSACTRAGDMEKAFALFQEMP----MKNTISWNTMLAGCLQR-GQFSEAVDLFDEMK 236
+LSAC+ AG +E+ F F+ M + I + +A L R G+ + D ++M
Sbjct: 725 VGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMP 784
Query: 237 TTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALM-DMYAKCGSI 295
P+ L +VL AC + + + L V L+ +MYA G
Sbjct: 785 MK---PNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRW 841
Query: 296 EQALQIFFKAQVKDI-----YCWNAIISGL 320
E ++ K + D+ Y W + G+
Sbjct: 842 EDLVKARKKMKDADVKKEAGYSWVTMKDGV 871
>AT4G08210.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:5183813-5185873 REVERSE
Length = 686
Score = 140 bits (352), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 149/320 (46%), Gaps = 44/320 (13%)
Query: 57 LKAAGKNCASRIGFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDL 116
L+ GK A + G + IK G +++F+ +I+MY +DA K+F+ M +++
Sbjct: 12 LRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNI 71
Query: 117 VAWNSMLDAYASNGEMEDAISLFHMM---------------PLK---------------- 145
V W +M+ Y S+G+ AI L+ M LK
Sbjct: 72 VTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYE 131
Query: 146 ---------DLSSFNILISGYSSCGEVLAARSIFDKMAIKDIVSWNSILSACTRAGDMEK 196
D+ N ++ Y G ++ A S F ++ SWN+++S +AG M++
Sbjct: 132 RIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDE 191
Query: 197 AFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAH 256
A LF MP N +SWN +++G + +G A++ M+ + D L AC+
Sbjct: 192 AVTLFHRMPQPNVVSWNCLISGFVDKGS-PRALEFLVRMQREGLVLDGFALPCGLKACSF 250
Query: 257 LGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQV---KDIYCW 313
G L G ++H + SGL SSP +AL+DMY+ CGS+ A +F + ++ + W
Sbjct: 251 GGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVW 310
Query: 314 NAIISGLALHGHGYAALKLF 333
N+++SG ++ AAL L
Sbjct: 311 NSMLSGFLINEENEAALWLL 330
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 99/338 (29%), Positives = 150/338 (44%), Gaps = 12/338 (3%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
MP V WN +I + G + +A+ V MQ G D + P LKA +G
Sbjct: 199 MPQPNVVSWNCLISGFVDKG-SPRALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMG 257
Query: 70 FAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMF--ENMPVKDLVA-WNSMLDAY 126
H +K+G F +ALI+MY A +F E + V VA WNSML +
Sbjct: 258 KQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGF 317
Query: 127 ASNGEMEDAISLFHMMPLKDLSSFNILISG-------YSSCGEVLAARSIFDKMAIK-DI 178
N E E A+ L + DL + +SG Y + L S+ + D
Sbjct: 318 LINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYELDY 377
Query: 179 VSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTT 238
+ + ++ G+++ A LF +P K+ I+++ ++ GC++ G S A LF E+
Sbjct: 378 IVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKL 437
Query: 239 NCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQA 298
D +++L C+ L SL G +IH I G S P TAL+DMY KCG I+
Sbjct: 438 GLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGEIDNG 497
Query: 299 LQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYM 336
+ +F +D+ W II G +G A + F M
Sbjct: 498 VVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKM 535
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 78/371 (21%), Positives = 157/371 (42%), Gaps = 42/371 (11%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNM-QVHGFRADNYTFPILLKAAGKNCASRI 68
M + W ++ + G +A+ Y M A+ + + +LKA G ++
Sbjct: 66 MSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQL 125
Query: 69 GFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYAS 128
G + + K + + ++++MY +A F+ + +WN+++ Y
Sbjct: 126 GILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCK 185
Query: 129 NGEMEDAISLFHMMPLKDLSSFNILISGYSSCGEVLAAR---------SIFDKMAIK--- 176
G M++A++LFH MP ++ S+N LISG+ G A + D A+
Sbjct: 186 AGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFALPCGL 245
Query: 177 ------DIVSWNSILSACTRAGDMEKA-FALF---------------------QEMPMKN 208
+++ L C +E + FA+ +++ + +
Sbjct: 246 KACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNS 305
Query: 209 TIS-WNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIH 267
+++ WN+ML+G L + A+ L ++ ++ D T + L C + +L G+++H
Sbjct: 306 SVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVH 365
Query: 268 VYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGY 327
+ SG V + L+D++A G+I+ A ++F + KDI ++ +I G G
Sbjct: 366 SLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNS 425
Query: 328 AALKLFGYMKK 338
A LF + K
Sbjct: 426 LAFYLFRELIK 436
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/320 (20%), Positives = 138/320 (43%), Gaps = 12/320 (3%)
Query: 15 VRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHG 74
V WN ++ ++ E A+ + + D+YT LK R+G H
Sbjct: 307 VAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHS 366
Query: 75 QTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMED 134
+ +G+ V + L++++ + DA K+F +P KD++A++ ++ +G
Sbjct: 367 LVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSL 426
Query: 135 AISLFHMMPLKDLSSFNILISGY----SSCGEVLAARSI----FDKMAIKDIVSWNSILS 186
A LF + L + ++S SS + + I K + V+ +++
Sbjct: 427 AFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVD 486
Query: 187 ACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLT 246
+ G+++ LF M ++ +SW ++ G Q G+ EA F +M P+ +T
Sbjct: 487 MYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVT 546
Query: 247 ATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVT--TALMDMYAKCGSIEQALQIFFK 304
+LSAC H G LE + + + S P++ ++D+ + G ++A ++ K
Sbjct: 547 FLGLLSACRHSGLLEEA-RSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELINK 605
Query: 305 AQVK-DIYCWNAIISGLALH 323
++ D W ++++ H
Sbjct: 606 MPLEPDKTIWTSLLTACGTH 625
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 90/197 (45%), Gaps = 8/197 (4%)
Query: 150 FNILISGYSSCGEVLAARS-------IFDKMAIKDIVSWNSILSACTRAGDMEKAFALFQ 202
++ +G CG+V A + + + +++ N+++S + A +F
Sbjct: 5 LKLIAAGLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFD 64
Query: 203 EMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEM-KTTNCLPDYLTATSVLSACAHLGSLE 261
EM +N ++W TM++G G+ ++A++L+ M + + ++VL AC +G ++
Sbjct: 65 EMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQ 124
Query: 262 TGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLA 321
GI ++ L + +++DMY K G + +A F + WN +ISG
Sbjct: 125 LGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYC 184
Query: 322 LHGHGYAALKLFGYMKK 338
G A+ LF M +
Sbjct: 185 KAGLMDEAVTLFHRMPQ 201
>AT3G26630.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:9791572-9792939 REVERSE
Length = 455
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 136/301 (45%), Gaps = 40/301 (13%)
Query: 73 HGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEM 132
H + IK + LI++ + T A +F + WN M+ + + N +
Sbjct: 40 HTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPSTFTWNLMIRSLSVNHKP 99
Query: 133 EDAISLFHMMPLKDLSSF----------------------------------------NI 152
+A+ LF +M + S F N
Sbjct: 100 REALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFFNDVFFQNT 159
Query: 153 LISGYSSCGEVLAARSIFDKMAIKDIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISW 212
L+ Y CG+ + R +FDKM + IVSW ++L ++ A +F +MPM+N +SW
Sbjct: 160 LMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSW 219
Query: 213 NTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIY 272
M+ ++ + EA LF M+ + P+ T ++L A LGSL G +H YA
Sbjct: 220 TAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHK 279
Query: 273 SGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKL 332
+G + TAL+DMY+KCGS++ A ++F Q K + WN++I+ L +HG G AL L
Sbjct: 280 NGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCGEEALSL 339
Query: 333 F 333
F
Sbjct: 340 F 340
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 142/300 (47%), Gaps = 46/300 (15%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQV-HGFRADNYTFPILLKAAGKNCASRIGFAFHGQT 76
WN +I+ + +A+L ++ M + H + D +TFP ++KA + + R+G HG
Sbjct: 86 WNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHGLA 145
Query: 77 IKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAI 136
IK GF+ +F Q L+++Y K+F+ MP + +V+W +ML SN +++ A
Sbjct: 146 IKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAE 205
Query: 137 SLFHMMPLKDLSSFNILISGYSSCGEVLAARSIFDKMAIKDIV----------------- 179
+F+ MP++++ S+ +I+ Y A +F +M + D+
Sbjct: 206 IVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLG 265
Query: 180 -----SW-----------------NSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLA 217
W +++ ++ G ++ A +F M K+ +WN+M+
Sbjct: 266 SLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMIT 325
Query: 218 GCLQRGQFSEAVDLFDEMKTTNCL-PDYLTATSVLSACAHLGSLETGIK-----IHVYAI 271
G EA+ LF+EM+ + PD +T VLSACA+ G+++ G++ I VY I
Sbjct: 326 SLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQVYGI 385
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 95/205 (46%), Gaps = 10/205 (4%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
MP V W +I ++ ++A + MQV + + +T LL+A+ + + +G
Sbjct: 211 MPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMG 270
Query: 70 FAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASN 129
H K GF F+ TALI+MY DA K+F+ M K L WNSM+ + +
Sbjct: 271 RWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVH 330
Query: 130 GEMEDAISLFHMMPL-----KDLSSFNILISGYSSCGEVLAARSIFDKM----AIKDIVS 180
G E+A+SLF M D +F ++S ++ G V F +M I I
Sbjct: 331 GCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQVYGISPIRE 390
Query: 181 WNS-ILSACTRAGDMEKAFALFQEM 204
N+ ++ +A ++EKA L + M
Sbjct: 391 HNACMIQLLEQALEVEKASNLVESM 415
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 71/154 (46%), Gaps = 1/154 (0%)
Query: 184 ILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLP- 242
++S + G+ + A +F ++ +T +WN M+ + EA+ LF M ++
Sbjct: 58 LISVSSSFGETQYASLVFNQLQSPSTFTWNLMIRSLSVNHKPREALLLFILMMISHQSQF 117
Query: 243 DYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIF 302
D T V+ AC S+ G ++H AI +G + LMD+Y KCG + ++F
Sbjct: 118 DKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVF 177
Query: 303 FKAQVKDIYCWNAIISGLALHGHGYAALKLFGYM 336
K + I W ++ GL + +A +F M
Sbjct: 178 DKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQM 211
>AT3G02010.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:337965-340442 FORWARD
Length = 825
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 92/343 (26%), Positives = 167/343 (48%), Gaps = 10/343 (2%)
Query: 4 LVCNCF--MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAG 61
L C F +P + +N +I + G +++ ++ M+ G + ++TF +LKA
Sbjct: 202 LACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVV 261
Query: 62 KNCASRIGFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNS 121
+G H ++ TGF R V +++ Y + +F+ MP D V++N
Sbjct: 262 GLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNV 321
Query: 122 MLDAYASNGEMEDAISLFHMMPLKDLSSFNILISGYSSCGEVLAARSIFDKMAIKDIV-S 180
++ +Y+ + E ++ F M N + S L++ + ++ + ++ +
Sbjct: 322 VISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLAT 381
Query: 181 WNSILSACTRAGDM-------EKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFD 233
+SIL DM E+A +F+ +P + T+SW +++G +Q+G + LF
Sbjct: 382 ADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFT 441
Query: 234 EMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCG 293
+M+ +N D T +VL A A SL G ++H + I SG + + L+DMYAKCG
Sbjct: 442 KMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCG 501
Query: 294 SIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYM 336
SI+ A+Q+F + ++ WNA+IS A +G G AA+ F M
Sbjct: 502 SIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKM 544
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 132/300 (44%), Gaps = 12/300 (4%)
Query: 49 DNYTFPILLKAAGKNCASRIGFAFHGQTIKTGFYRHIF--VQTALINMYGTLHCTADACK 106
D+ TF LL H +K GF + F V L+ Y + AC
Sbjct: 146 DHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACV 205
Query: 107 MFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMPLKDLSSFNILISGYSSC------ 160
+FE +P KD V +N+++ Y +G ++I LF M + SG
Sbjct: 206 LFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHD 265
Query: 161 ---GEVLAARSIFDKMAIKDIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLA 217
G+ L A S+ + +D N IL ++ + + LF EMP + +S+N +++
Sbjct: 266 FALGQQLHALSVTTGFS-RDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVIS 324
Query: 218 GCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLAS 277
Q Q+ ++ F EM+ ++LS A+L SL+ G ++H A+ + S
Sbjct: 325 SYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADS 384
Query: 278 SPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMK 337
HV +L+DMYAKC E+A IF + W A+ISG G A LKLF M+
Sbjct: 385 ILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMR 444
Score = 107 bits (268), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 75/342 (21%), Positives = 153/342 (44%), Gaps = 14/342 (4%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
MP L+ +N +I + E ++ + MQ GF N+ F +L A + ++G
Sbjct: 311 MPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMG 370
Query: 70 FAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASN 129
H Q + + V +L++MY +A +F+++P + V+W +++ Y
Sbjct: 371 RQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQK 430
Query: 130 GEMEDAISLFHMMP----LKDLSSFNILISGYSSCGEVLAARS----IFDKMAIKDIVSW 181
G + LF M D S+F ++ +S +L + I ++++ S
Sbjct: 431 GLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSG 490
Query: 182 NSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCL 241
+ ++ + G ++ A +F+EMP +N +SWN +++ G A+ F +M +
Sbjct: 491 SGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQ 550
Query: 242 PDYLTATSVLSACAHLGSLETGIK-IHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQ 300
PD ++ VL+AC+H G +E G + + G+ ++D+ + G +A +
Sbjct: 551 PDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEK 610
Query: 301 IFFKAQVK-DIYCWNAIISGLALHGHG----YAALKLFGYMK 337
+ + + D W+++++ +H + AA KLF K
Sbjct: 611 LMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEK 652
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 102/197 (51%), Gaps = 4/197 (2%)
Query: 146 DLSSFNILISGYSSCGEVLAARSIFDKMAIKDIVSWNSILSACTRAGDMEKAFALFQEMP 205
D N ++ G+V AAR ++D+M K+ VS N+++S + GD+ A LF MP
Sbjct: 47 DTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTGDVSSARDLFDAMP 106
Query: 206 MKNTISWNTMLAGCLQRGQFSEAVDLFDEM-KTTNC-LPDYLTATSVLSACAHLGSLETG 263
+ ++W ++ + F EA LF +M ++++C LPD++T T++L C
Sbjct: 107 DRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAV 166
Query: 264 IKIHVYAIYSGLASSPHVTTA--LMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLA 321
++H +A+ G ++P +T + L+ Y + ++ A +F + KD +N +I+G
Sbjct: 167 GQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYE 226
Query: 322 LHGHGYAALKLFGYMKK 338
G ++ LF M++
Sbjct: 227 KDGLYTESIHLFLKMRQ 243
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/307 (21%), Positives = 131/307 (42%), Gaps = 43/307 (14%)
Query: 74 GQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEME 133
+ IKTGF ++ + A K+++ MP K+ V+ N+M+ + G++
Sbjct: 37 ARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTGDVS 96
Query: 134 DAISLFHMMPLKDLSSFNILISGYSSCGEVLAARSIFDKM------AIKDIVSWNSILSA 187
A LF MP + + ++ IL+ Y+ A +F +M + D V++ ++L
Sbjct: 97 SARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPG 156
Query: 188 CTRA-------------------------------------GDMEKAFALFQEMPMKNTI 210
C A ++ A LF+E+P K+++
Sbjct: 157 CNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSV 216
Query: 211 SWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYA 270
++NT++ G + G ++E++ LF +M+ + P T + VL A L G ++H +
Sbjct: 217 TFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALS 276
Query: 271 IYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAAL 330
+ +G + V ++D Y+K + + +F + D +N +IS + A+L
Sbjct: 277 VTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASL 336
Query: 331 KLFGYMK 337
F M+
Sbjct: 337 HFFREMQ 343
>AT5G15340.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:4982273-4984144 REVERSE
Length = 623
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 94/334 (28%), Positives = 156/334 (46%), Gaps = 53/334 (15%)
Query: 55 ILLKAAGKNCASRIGFAFHGQTIKTGFYR--HIFVQTALINMYGTLHCTADACKMFENMP 112
+LL+ R G H +G + ++ AL Y + A K+F+ +P
Sbjct: 11 LLLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIP 70
Query: 113 V--KDLVAWNSMLDAYASNGEMEDAISLFHMMPLK-----DLSSF--------------- 150
+ KD V W ++L +++ G + +++ LF M K D+S
Sbjct: 71 LSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFA 130
Query: 151 -------------------NILISGYSSCGEVLAARSIFDKMAIKDIVSWNSILSACTRA 191
N L+ Y CG V + IF+++ K +VSW +L +
Sbjct: 131 QQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKW 190
Query: 192 GDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEM--KTTNCLPDYLTATS 249
+E+ +F EMP +N ++W M+AG L G E ++L EM + + L +++T S
Sbjct: 191 EGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGL-NFVTLCS 249
Query: 250 VLSACAHLGSLETGIKIHVYAIYSGLASSPH-------VTTALMDMYAKCGSIEQALQIF 302
+LSACA G+L G +HVYA+ + V TAL+DMYAKCG+I+ ++ +F
Sbjct: 250 MLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVF 309
Query: 303 FKAQVKDIYCWNAIISGLALHGHGYAALKLFGYM 336
+ +++ WNA+ SGLA+HG G + +F M
Sbjct: 310 RLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQM 343
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/330 (22%), Positives = 138/330 (41%), Gaps = 52/330 (15%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFA--FHGQ 75
W ++ G ++ +V M+ D+ + L K +GFA HG
Sbjct: 79 WTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAK--LEDLGFAQQGHGV 136
Query: 76 TIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDA 135
+K G + V AL++MYG ++ ++FE + K +V+W +LD +E
Sbjct: 137 AVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERG 196
Query: 136 ISLFHMMPLKDLSSFNILISGYSSCGEVLAARSIFDKMAIK-----DIVSWNSILSACTR 190
+FH MP ++ ++ ++++GY G + +M + + V+ S+LSAC +
Sbjct: 197 REVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQ 256
Query: 191 AGDM------------------------------------------EKAFALFQEMPMKN 208
+G++ + + +F+ M +N
Sbjct: 257 SGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRN 316
Query: 209 TISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHV 268
++WN + +G G+ +D+F +M PD LT T+VLSAC+H G ++ G +
Sbjct: 317 VVTWNALFSGLAMHGKGRMVIDMFPQM-IREVKPDDLTFTAVLSACSHSGIVDEGWRCFH 375
Query: 269 YAIYSGLASSPHVTTALMDMYAKCGSIEQA 298
+ GL ++D+ + G IE+A
Sbjct: 376 SLRFYGLEPKVDHYACMVDLLGRAGLIEEA 405
>AT4G39952.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:18527680-18530007 FORWARD
Length = 726
Score = 139 bits (349), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 101/394 (25%), Positives = 174/394 (44%), Gaps = 67/394 (17%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCAS--- 66
MP +V W II H+ G +E + M G D P L+ + C++
Sbjct: 187 MPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPN-PRTLECGFQACSNLGA 245
Query: 67 -RIGFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDA 125
+ G HG +K G FVQ+++ + Y ++A F + +D+ +W S++ +
Sbjct: 246 LKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIAS 305
Query: 126 YASNGEMEDAISLFHMMPLKDLSSFNILISGY------------------SSCGEVLAAR 167
A +G+ME++ +F M K + ++IS + C +L+
Sbjct: 306 LARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGTVCNSLLSMY 365
Query: 168 SIFDKMAIKDIV-----------SWNSILSA-----------C----------------- 188
F+ +++ + + +WN++L C
Sbjct: 366 CKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGAVLLGKSLHCYVVKTSLDLTISVVNSL 425
Query: 189 ----TRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDY 244
+ GD+ A+ +F E N I+WN M+A + Q +A+ LFD M + N P
Sbjct: 426 IDLYGKMGDLTVAWRMFCEAD-TNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSS 484
Query: 245 LTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFK 304
+T ++L AC + GSLE G IH Y + + ++ AL+DMYAKCG +E++ ++F
Sbjct: 485 ITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDA 544
Query: 305 AQVKDIYCWNAIISGLALHGHGYAALKLFGYMKK 338
KD CWN +ISG +HG +A+ LF M++
Sbjct: 545 GNQKDAVCWNVMISGYGMHGDVESAIALFDQMEE 578
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 88/385 (22%), Positives = 163/385 (42%), Gaps = 68/385 (17%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTI 77
WN IIK H G+ +++ + +M + G D++T P+++ A + +G HG +
Sbjct: 93 WNSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVL 152
Query: 78 K-TGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAI 136
K GF R+ V + + Y DAC +F+ MP +D+VAW +++ + NGE E +
Sbjct: 153 KHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGL 212
Query: 137 SLFHMMPLK----DLSSFNILISGYSSC--------GEVLAARSIFDKMAIKDIVSWNSI 184
M D + L G+ +C G L ++ + +A V +S+
Sbjct: 213 GYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQ-SSM 271
Query: 185 LSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDY 244
S +++G+ +A+ F+E+ ++ SW +++A + G E+ D+F EM+ PD
Sbjct: 272 FSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDG 331
Query: 245 LTATSVL-----------------SACAHLGSL------------------ETGIK---- 265
+ + ++ + C L S+ E G K
Sbjct: 332 VVISCLINELGKMMLVPQGKAFHGTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWN 391
Query: 266 --------------IHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIY 311
+H Y + + L + V +L+D+Y K G + A ++F +A ++
Sbjct: 392 TMLKGYGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCEADT-NVI 450
Query: 312 CWNAIISGLALHGHGYAALKLFGYM 336
WNA+I+ A+ LF M
Sbjct: 451 TWNAMIASYVHCEQSEKAIALFDRM 475
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 133/273 (48%), Gaps = 12/273 (4%)
Query: 77 IKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAI 136
I G +IFV + LI+ Y + + ++F + +D+ WNS++ A+ SNG+ ++
Sbjct: 51 ITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSL 110
Query: 137 SLFHMMPLKDLSSFNILIS-GYSSCGEVL--AARSIFDKMAIK------DIVSWNSILSA 187
F M L S + S+C E+L + + +K + S +
Sbjct: 111 CFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYF 170
Query: 188 CTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNC---LPDY 244
++ G ++ A +F EMP ++ ++W +++G +Q G+ + +M + P+
Sbjct: 171 YSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNP 230
Query: 245 LTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFK 304
T AC++LG+L+ G +H +A+ +GLASS V +++ Y+K G+ +A F +
Sbjct: 231 RTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRE 290
Query: 305 AQVKDIYCWNAIISGLALHGHGYAALKLFGYMK 337
+D++ W +II+ LA G + +F M+
Sbjct: 291 LGDEDMFSWTSIIASLARSGDMEESFDMFWEMQ 323
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 131/284 (46%), Gaps = 23/284 (8%)
Query: 56 LLKAAGKNCASRIGFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKD 115
+LK G A +G + H +KT I V +LI++YG + A +MF +
Sbjct: 393 MLKGYG---AVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCEADT-N 448
Query: 116 LVAWNSMLDAYASNGEMEDAISLFHMMPLKDLSSFNILI---------SGYSSCGEVLAA 166
++ WN+M+ +Y + E AI+LF M ++ +I + +G G+++
Sbjct: 449 VITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIH- 507
Query: 167 RSIFDKMAIKDIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFS 226
R I + ++ +++ + G +EK+ LF K+ + WN M++G G
Sbjct: 508 RYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVE 567
Query: 227 EAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETG----IKIHVYAIYSGLASSPHVT 282
A+ LFD+M+ ++ P T ++LSAC H G +E G +K+H Y + L
Sbjct: 568 SAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQYDVKPNLKH----Y 623
Query: 283 TALMDMYAKCGSIEQALQIFFKAQVK-DIYCWNAIISGLALHGH 325
+ L+D+ ++ G++E+A D W ++S HG
Sbjct: 624 SCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTHGE 667
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 105/223 (47%), Gaps = 9/223 (4%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTI 77
WN +I ++ +E+A+ + M F+ + T LL A + G H
Sbjct: 452 WNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYIT 511
Query: 78 KTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAIS 137
+T ++ + ALI+MY + ++F+ KD V WN M+ Y +G++E AI+
Sbjct: 512 ETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIA 571
Query: 138 LFHMMPLKDLS----SFNILISGYSSCGEVLAARSIFDKMAIKDIVS----WNSILSACT 189
LF M D+ +F L+S + G V + +F KM D+ ++ ++ +
Sbjct: 572 LFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQYDVKPNLKHYSCLVDLLS 631
Query: 190 RAGDMEKAFALFQEMPMK-NTISWNTMLAGCLQRGQFSEAVDL 231
R+G++E+A + MP + + W T+L+ C+ G+F + +
Sbjct: 632 RSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTHGEFEMGIRM 674
>AT1G09190.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: shoot apex, sperm cell,
embryo, flower, seed; EXPRESSED DURING: petal
differentiation and expansion stage, D bilateral stage,
E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT5G56310.1); Has
12606 Blast hits to 4809 proteins in 101 species: Archae
- 0; Bacteria - 0; Metazoa - 13; Fungi - 33; Plants -
12368; Viruses - 0; Other Eukaryotes - 192 (source: NCBI
BLink). | chr1:2966263-2967717 REVERSE
Length = 484
Score = 139 bits (349), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 91/351 (25%), Positives = 167/351 (47%), Gaps = 45/351 (12%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTI 77
+N +IK + LVG +++ + +M+ G AD YT+ LLK+ R G HG+ I
Sbjct: 70 FNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGELI 129
Query: 78 KTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAIS 137
+TGF+R ++ ++ +Y + DA K+F+ M +++V WN M+ + +G++E +
Sbjct: 130 RTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLH 189
Query: 138 LFHMMPLKDLSSFNILISGYSSCGEVLAARSIFDKM----------------------AI 175
LF M + + S+N +IS S CG A +F +M +
Sbjct: 190 LFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGV 249
Query: 176 KDIVSW------------------NSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLA 217
D W N+++ ++GD+E A A+F++M +N +SWNT+++
Sbjct: 250 LDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLIS 309
Query: 218 GCLQRGQFSEAVDLFDEM-KTTNCLPDYLTATSVLSACAHLGSLETGIKIH--VYAIYSG 274
G G+ +DLFD M + P+ T VL+ C++ G +E G ++ + +
Sbjct: 310 GSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKL 369
Query: 275 LASSPHVTTALMDMYAKCGSIEQALQIFFKAQVK-DIYCWNAIISGLALHG 324
A + H A++D+ ++ G I +A + V + W +++S HG
Sbjct: 370 EARTEHY-GAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSHG 419
Score = 128 bits (321), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 152/316 (48%), Gaps = 41/316 (12%)
Query: 61 GKNCASRIGFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWN 120
G N +R+ H ++ + + I++ G+L + A ++F ++ +++ +N
Sbjct: 13 GHNTRTRLP-EIHAHLLRHFLHGSNLLLAHFISICGSLSNSDYANRVFSHIQNPNVLVFN 71
Query: 121 SMLDAYASNGEMEDAISLFHMMP--------------LKDLSSFNILISG---------- 156
+M+ Y+ G +++S F M LK SS + L G
Sbjct: 72 AMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRT 131
Query: 157 ---------------YSSCGEVLAARSIFDKMAIKDIVSWNSILSACTRAGDMEKAFALF 201
Y+S G + A+ +FD+M+ +++V WN ++ +GD+E+ LF
Sbjct: 132 GFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLF 191
Query: 202 QEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLE 261
++M ++ +SWN+M++ + G+ EA++LF EM PD T +VL A LG L+
Sbjct: 192 KQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLD 251
Query: 262 TGIKIHVYAIYSGLASS-PHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGL 320
TG IH A SGL V AL+D Y K G +E A IF K Q +++ WN +ISG
Sbjct: 252 TGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGS 311
Query: 321 ALHGHGYAALKLFGYM 336
A++G G + LF M
Sbjct: 312 AVNGKGEFGIDLFDAM 327
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 95/227 (41%), Gaps = 12/227 (5%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
M + WN +I G +A+ + M GF D T +L + G
Sbjct: 194 MSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTG 253
Query: 70 FAFHGQTIKTGFYRH-IFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYAS 128
H +G ++ I V AL++ Y A +F M +++V+WN+++ A
Sbjct: 254 KWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAV 313
Query: 129 NGEMEDAISLFHMMPLK-----DLSSFNILISGYSSCGEVLAARSIFDKMAIK-----DI 178
NG+ E I LF M + + ++F +++ S G+V +F M +
Sbjct: 314 NGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEART 373
Query: 179 VSWNSILSACTRAGDMEKAFALFQEMPMK-NTISWNTMLAGCLQRGQ 224
+ +++ +R+G + +AF + MP+ N W ++L+ C G
Sbjct: 374 EHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSHGD 420
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 65/154 (42%)
Query: 185 LSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDY 244
+S C + + A +F + N + +N M+ G E++ F MK+ D
Sbjct: 43 ISICGSLSNSDYANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADE 102
Query: 245 LTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFK 304
T +L +C+ L L G +H I +G + ++++Y G + A ++F +
Sbjct: 103 YTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDE 162
Query: 305 AQVKDIYCWNAIISGLALHGHGYAALKLFGYMKK 338
+++ WN +I G G L LF M +
Sbjct: 163 MSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSE 196
>AT3G62890.1 | Symbols: | binding | chr3:23246168-23247973 FORWARD
Length = 573
Score = 139 bits (349), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 74/190 (38%), Positives = 117/190 (61%), Gaps = 6/190 (3%)
Query: 153 LISGYSSCGEVLAARSIFDKMAIKDIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISW 212
L++ YSSCG++ +A+ +FD KD+ +WNS+++A +AG ++ A LF EMP +N ISW
Sbjct: 103 LLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISW 162
Query: 213 NTMLAGCLQRGQFSEAVDLFDEMKTTN-----CLPDYLTATSVLSACAHLGSLETGIKIH 267
+ ++ G + G++ EA+DLF EM+ P+ T ++VLSAC LG+LE G +H
Sbjct: 163 SCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVH 222
Query: 268 VYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFK-AQVKDIYCWNAIISGLALHGHG 326
Y + + TAL+DMYAKCGS+E+A ++F KD+ ++A+I LA++G
Sbjct: 223 AYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLT 282
Query: 327 YAALKLFGYM 336
+LF M
Sbjct: 283 DECFQLFSEM 292
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 97/363 (26%), Positives = 163/363 (44%), Gaps = 51/363 (14%)
Query: 13 LEVRRWNEIIKKHMLVGNAEQ---AVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
LE WN II+ + ++ Q + Y+ M+ H D +TFP LL + +G
Sbjct: 22 LESFLWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLG 81
Query: 70 FAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASN 129
H Q + G + FV+T+L+NMY + A ++F++ KDL AWNS+++AYA
Sbjct: 82 QRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKA 141
Query: 130 GEMEDAISLFHMMPLKDLSSFNILISGYSSCGEVLAARSIFDKMAI---------KDIVS 180
G ++DA LF MP +++ S++ LI+GY CG+ A +F +M + + +
Sbjct: 142 GLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFT 201
Query: 181 WNSILSACTR-----------------------------------AGDMEKAFALFQEMP 205
+++LSAC R G +E+A +F +
Sbjct: 202 MSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALG 261
Query: 206 MKNTISWNTMLAGCL-QRGQFSEAVDLFDEMKTT-NCLPDYLTATSVLSACAHLGSLETG 263
K + + + CL G E LF EM T+ N P+ +T +L AC H G + G
Sbjct: 262 SKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEG 321
Query: 264 IKIHVYAIYS-GLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVK-DIYCWNAIISGLA 321
I G+ S ++D+Y + G I++A ++ D+ W +++SG
Sbjct: 322 KSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSR 381
Query: 322 LHG 324
+ G
Sbjct: 382 MLG 384
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 61/130 (46%), Gaps = 3/130 (2%)
Query: 212 WNTMLAGCLQR---GQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHV 268
WN ++ + Q + ++ M+ PD+ T +L + + L G + H
Sbjct: 27 WNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHA 86
Query: 269 YAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYA 328
+ GL P V T+L++MY+ CG + A ++F + KD+ WN++++ A G
Sbjct: 87 QILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDD 146
Query: 329 ALKLFGYMKK 338
A KLF M +
Sbjct: 147 ARKLFDEMPE 156
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 102/227 (44%), Gaps = 19/227 (8%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHG-----FRADNYTFPILLKAAGKNC 64
MP V W+ +I +++ G ++A+ + MQ+ R + +T +L A G+
Sbjct: 154 MPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLG 213
Query: 65 ASRIGFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENM-PVKDLVAWNSML 123
A G H K I + TALI+MY A ++F + KD+ A+++M+
Sbjct: 214 ALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMI 273
Query: 124 DAYASNGEMEDAISLFHMMPLKDLSSFN--ILISGYSSC---GEVLAARSIFDKMAIKD- 177
A G ++ LF M D + N + +C G + +S F KM I++
Sbjct: 274 CCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYF-KMMIEEF 332
Query: 178 -----IVSWNSILSACTRAGDMEKAFALFQEMPMK-NTISWNTMLAG 218
I + ++ R+G +++A + MPM+ + + W ++L+G
Sbjct: 333 GITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSG 379
>AT4G21300.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:11336479-11339052 FORWARD
Length = 857
Score = 138 bits (348), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 104/341 (30%), Positives = 169/341 (49%), Gaps = 26/341 (7%)
Query: 15 VRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKA--AGKNCASRIGFAF 72
+R WN II + G QA+ Y M G D TFP L+KA A KN G F
Sbjct: 103 IRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFK---GIDF 159
Query: 73 HGQTIKT-GFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGE 131
T+ + G + FV ++LI Y K+F+ + KD V WN ML+ YA G
Sbjct: 160 LSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGA 219
Query: 132 MEDAISLFHMMPLKDLS----SFNILIS----------GYSSCGEVLAARSIFDKMAIKD 177
++ I F +M + +S +F+ ++S G G V+ + F+ +IK
Sbjct: 220 LDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEG-SIK- 277
Query: 178 IVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKT 237
NS+LS ++ G + A LF+ M +T++WN M++G +Q G E++ F EM +
Sbjct: 278 ----NSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMIS 333
Query: 238 TNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQ 297
+ LPD +T +S+L + + +LE +IH Y + ++ +T+AL+D Y KC +
Sbjct: 334 SGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSM 393
Query: 298 ALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMKK 338
A IF + D+ + A+ISG +G +L++F ++ K
Sbjct: 394 AQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVK 434
Score = 127 bits (320), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 93/327 (28%), Positives = 156/327 (47%), Gaps = 8/327 (2%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTI 77
WN +I ++ G E+++ + M G D TF LL + K H +
Sbjct: 308 WNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIM 367
Query: 78 KTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAIS 137
+ IF+ +ALI+ Y + A +F D+V + +M+ Y NG D++
Sbjct: 368 RHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLE 427
Query: 138 LFHMMPLKDLSSFNI-LISGYSSCGEVLA---ARSIFDKMAIKDIVSWNSILSAC----T 189
+F + +S I L+S G +LA R + + K + +I A
Sbjct: 428 MFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYA 487
Query: 190 RAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATS 249
+ G M A+ +F+ + ++ +SWN+M+ C Q S A+D+F +M + D ++ ++
Sbjct: 488 KCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISA 547
Query: 250 VLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKD 309
LSACA+L S G IH + I LAS + + L+DMYAKCG+++ A+ +F + K+
Sbjct: 548 ALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKN 607
Query: 310 IYCWNAIISGLALHGHGYAALKLFGYM 336
I WN+II+ HG +L LF M
Sbjct: 608 IVSWNSIIAACGNHGKLKDSLCLFHEM 634
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 133/284 (46%), Gaps = 13/284 (4%)
Query: 52 TFPILLKAAGKNCASRIGFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENM 111
T +L G A ++G HG IK GF + A+I+MY A ++FE +
Sbjct: 443 TLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERL 502
Query: 112 PVKDLVAWNSMLDAYASNGEMEDAISLFHMMPLKDLSSFNILISG-YSSC--------GE 162
+D+V+WNSM+ A + AI +F M + + + IS S+C G+
Sbjct: 503 SKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGK 562
Query: 163 VLAARSIFDKMAIKDIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQR 222
+ I +A D+ S ++++ + G+++ A +F+ M KN +SWN+++A C
Sbjct: 563 AIHGFMIKHSLA-SDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNH 621
Query: 223 GQFSEAVDLFDEM-KTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYS-GLASSPH 280
G+ +++ LF EM + + PD +T ++S+C H+G ++ G++ G+
Sbjct: 622 GKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQE 681
Query: 281 VTTALMDMYAKCGSIEQALQIFFKAQV-KDIYCWNAIISGLALH 323
++D++ + G + +A + D W ++ LH
Sbjct: 682 HYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLH 725
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 124/293 (42%), Gaps = 12/293 (4%)
Query: 55 ILLKAAGKNCASRIGFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVK 114
+LL+A R G H I + ++ MY +D KMF + ++
Sbjct: 40 LLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLR 99
Query: 115 --DLVAWNSMLDAYASNGEMEDAISLFHMMPL----KDLSSFNILISGYSSCGEVLAARS 168
+ WNS++ ++ NG + A++ + M D+S+F L+ +
Sbjct: 100 RSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDF 159
Query: 169 IFDK-----MAIKDIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRG 223
+ D M + V+ +S++ A G ++ LF + K+ + WN ML G + G
Sbjct: 160 LSDTVSSLGMDCNEFVA-SSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCG 218
Query: 224 QFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTT 283
+ F M+ P+ +T VLS CA ++ G+++H + SG+ +
Sbjct: 219 ALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKN 278
Query: 284 ALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYM 336
+L+ MY+KCG + A ++F D WN +ISG G +L F M
Sbjct: 279 SLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEM 331
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 94/217 (43%), Gaps = 11/217 (5%)
Query: 14 EVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFH 73
++ WN +I + N A+ + M V G D + L A + G A H
Sbjct: 506 DIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIH 565
Query: 74 GQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEME 133
G IK ++ ++ LI+MY A +F+ M K++V+WNS++ A ++G+++
Sbjct: 566 GFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLK 625
Query: 134 DAISLFHMMPLK-----DLSSFNILISGYSSCGEVLAARSIFDKMAIKDIVSWNSILSAC 188
D++ LFH M K D +F +IS G+V F M + AC
Sbjct: 626 DSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYAC 685
Query: 189 T-----RAGDMEKAFALFQEMPM-KNTISWNTMLAGC 219
RAG + +A+ + MP + W T+L C
Sbjct: 686 VVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGAC 722
>AT3G49170.1 | Symbols: EMB2261 | EMB2261 (embryo defective 2261) |
chr3:18226954-18229600 REVERSE
Length = 850
Score = 138 bits (347), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 163/342 (47%), Gaps = 19/342 (5%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
M L V W +I + M +G +A+ +++M + GF +D +T + A + +G
Sbjct: 229 MSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLG 288
Query: 70 FAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADAC-----KMFENMPVKDLVAWNSMLD 124
H I++G V+ +L++MY C+AD K+F+ M +++W +++
Sbjct: 289 KQLHSWAIRSGLVDD--VECSLVDMYAK--CSADGSVDDCRKVFDRMEDHSVMSWTALIT 344
Query: 125 AYASNGEM-EDAISLFHMMPLKDLSSFN--ILISGYSSCGEVLAAR-------SIFDKMA 174
Y N + +AI+LF M + N S + +CG + R F +
Sbjct: 345 GYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGL 404
Query: 175 IKDIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDE 234
+ NS++S ++ ME A F+ + KN +S+NT L G + F +A L E
Sbjct: 405 ASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSE 464
Query: 235 MKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGS 294
+ T S+LS A++GS+ G +IH + GL+ + V AL+ MY+KCGS
Sbjct: 465 ITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGS 524
Query: 295 IEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYM 336
I+ A ++F + +++ W ++I+G A HG L+ F M
Sbjct: 525 IDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQM 566
Score = 117 bits (293), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 152/318 (47%), Gaps = 19/318 (5%)
Query: 19 NEIIKKHMLVGNAEQAVLTYVNMQVHGFRA-DNYTFPILLKAAGKNCASRIGFAFHGQTI 77
+ +I +H+ G+ AV M G R D+ TF LLK+ + R+G H + I
Sbjct: 30 DRLILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLI 89
Query: 78 KTGFYRHIFVQTALINMYGTLHCTADACKMFENMPV---KDLVAWNSMLDAYASNGEMED 134
+ + +LI++Y +A A +FE M +D+V+W++M+ Y +NG D
Sbjct: 90 EFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELD 149
Query: 135 AISLF----HMMPLKDLSSFNILISGYSSCGEVLAARSIFDKMAI-----KDIVSWNSIL 185
AI +F + + + + +I S+ V R + D+ S++
Sbjct: 150 AIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLI 209
Query: 186 SACTRAGD-MEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDY 244
+ + E A+ +F +M N ++W M+ C+Q G EA+ F +M + D
Sbjct: 210 DMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDK 269
Query: 245 LTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKC---GSIEQALQI 301
T +SV SACA L +L G ++H +AI SGL V +L+DMYAKC GS++ ++
Sbjct: 270 FTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKV 327
Query: 302 FFKAQVKDIYCWNAIISG 319
F + + + W A+I+G
Sbjct: 328 FDRMEDHSVMSWTALITG 345
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 153/333 (45%), Gaps = 22/333 (6%)
Query: 10 MPSLEVRRWNEIIKKHMLVGN-AEQAVLTYVNMQVHG-FRADNYTFPILLKAAGKNCASR 67
M V W +I +M N A +A+ + M G +++TF KA G R
Sbjct: 331 MEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPR 390
Query: 68 IGFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYA 127
+G GQ K G + V ++I+M+ DA + FE++ K+LV++N+ LD
Sbjct: 391 VGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTC 450
Query: 128 SNGEMEDAISLFHMMPLKDLS----SFNILISGYSSCGEVLAARSIFDKMAIKDIVSWN- 182
N E A L + ++L +F L+SG ++ G + I ++ +K +S N
Sbjct: 451 RNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQV-VKLGLSCNQ 509
Query: 183 ----SILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTT 238
+++S ++ G ++ A +F M +N ISW +M+ G + G ++ F++M
Sbjct: 510 PVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEE 569
Query: 239 NCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVT--TALMDMYAKCGSIE 296
P+ +T ++LSAC+H+G + G + H ++Y P + ++D+ + G +
Sbjct: 570 GVKPNEVTYVAILSACSHVGLVSEGWR-HFNSMYEDHKIKPKMEHYACMVDLLCRAGLLT 628
Query: 297 QALQIF----FKAQVKDIYCWNAIISGLALHGH 325
A + F+A D+ W + +H +
Sbjct: 629 DAFEFINTMPFQA---DVLVWRTFLGACRVHSN 658
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 149/333 (44%), Gaps = 13/333 (3%)
Query: 14 EVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFH 73
+V W+ ++ + G A+ +V G ++Y + +++A + +G
Sbjct: 130 DVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTL 189
Query: 74 GQTIKTG-FYRHIFVQTALINMY-GTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGE 131
G +KTG F + V +LI+M+ + +A K+F+ M ++V W M+ G
Sbjct: 190 GFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGF 249
Query: 132 MEDAISLFHMMPLKDLSSFNILISG-YSSCGEV--LAARSIFDKMAIK-----DI-VSWN 182
+AI F M L S +S +S+C E+ L+ AI+ D+ S
Sbjct: 250 PREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVECSLV 309
Query: 183 SILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQF-SEAVDLFDEMKTTNCL 241
+ + C+ G ++ +F M + +SW ++ G ++ +EA++LF EM T +
Sbjct: 310 DMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHV 369
Query: 242 -PDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQ 300
P++ T +S AC +L G ++ A GLAS+ V +++ M+ K +E A +
Sbjct: 370 EPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQR 429
Query: 301 IFFKAQVKDIYCWNAIISGLALHGHGYAALKLF 333
F K++ +N + G + + A KL
Sbjct: 430 AFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLL 462
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 106/220 (48%), Gaps = 18/220 (8%)
Query: 130 GEMEDAISLFHMM------PLKDLSSFNILISGYSS----CGEVLAARSI-FDKMAIKDI 178
G++ A+S +M P+ ++ ++L S + G+++ AR I FD D
Sbjct: 40 GDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFD--IEPDS 97
Query: 179 VSWNSILSACTRAGDMEKAFALFQEMPM---KNTISWNTMLAGCLQRGQFSEAVDLFDEM 235
V +NS++S +++GD KA +F+ M ++ +SW+ M+A G+ +A+ +F E
Sbjct: 98 VLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEF 157
Query: 236 KTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSG-LASSPHVTTALMDMYAKC-G 293
+P+ T+V+ AC++ + G + + +G S V +L+DM+ K
Sbjct: 158 LELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGEN 217
Query: 294 SIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLF 333
S E A ++F K ++ W +I+ G A++ F
Sbjct: 218 SFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFF 257
>AT3G08820.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:2677122-2679179 REVERSE
Length = 685
Score = 138 bits (347), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 93/346 (26%), Positives = 154/346 (44%), Gaps = 82/346 (23%)
Query: 38 YVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTIKTGFYRHIFVQTALINMYGT 97
+++++ HG +TFP++LKA + + ++G H +K GF + T+L+++Y
Sbjct: 99 FLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSG 158
Query: 98 LHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMM--------------- 142
DA K+F+ +P + +V W ++ Y ++G +AI LF M
Sbjct: 159 SGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQV 218
Query: 143 -----PLKDLSS-------------------FNILISGYSSCGEVLAARSIFDKMAIKDI 178
+ DL S L++ Y+ CG++ ARS+FD M KDI
Sbjct: 219 LSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDI 278
Query: 179 VSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTT 238
V+W +TM+ G E ++LF +M
Sbjct: 279 VTW-------------------------------STMIQGYASNSFPKEGIELFLQMLQE 307
Query: 239 NCLPDYLTATSVLSACAHLGSLETG------IKIHVYAIYSGLASSPHVTTALMDMYAKC 292
N PD + LS+CA LG+L+ G I H + ++ + AL+DMYAKC
Sbjct: 308 NLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEF------LTNLFMANALIDMYAKC 361
Query: 293 GSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMKK 338
G++ + ++F + + KDI NA ISGLA +GH + +FG +K
Sbjct: 362 GAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEK 407
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 117/243 (48%), Gaps = 18/243 (7%)
Query: 107 MFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMPLKDLSSFNILISGYS------SC 160
+F + ++ +NS+++ + +N + + LF + + + G++ +C
Sbjct: 67 LFSHTQFPNIFLYNSLINGFVNNHLFHETLDLF-----LSIRKHGLYLHGFTFPLVLKAC 121
Query: 161 GEVLAARSIFD--KMAIK-----DIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWN 213
+ + D + +K D+ + S+LS + +G + A LF E+P ++ ++W
Sbjct: 122 TRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWT 181
Query: 214 TMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYS 273
+ +G G+ EA+DLF +M PD VLSAC H+G L++G I Y
Sbjct: 182 ALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEM 241
Query: 274 GLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLF 333
+ + V T L+++YAKCG +E+A +F KDI W+ +I G A + ++LF
Sbjct: 242 EMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELF 301
Query: 334 GYM 336
M
Sbjct: 302 LQM 304
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 150/329 (45%), Gaps = 22/329 (6%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
+P V W + + G +A+ + M G + D+Y +L A C +G
Sbjct: 172 IPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSA----CV-HVG 226
Query: 70 FAFHGQTI-----KTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLD 124
G+ I + ++ FV+T L+N+Y A +F++M KD+V W++M+
Sbjct: 227 DLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQ 286
Query: 125 AYASNGEMEDAISLFHMMPLKDLSSFNILISGY-SSCGEVLA------ARSIFDKMA-IK 176
YASN ++ I LF M ++L I G+ SSC + A S+ D+ +
Sbjct: 287 GYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLT 346
Query: 177 DIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMK 236
++ N+++ + G M + F +F+EM K+ + N ++G + G + +F + +
Sbjct: 347 NLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTE 406
Query: 237 TTNCLPDYLTATSVLSACAHLGSLETGIKIH--VYAIYSGLASSPHVTTALMDMYAKCGS 294
PD T +L C H G ++ G++ + +Y+ + H ++D++ + G
Sbjct: 407 KLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHY-GCMVDLWGRAGM 465
Query: 295 IEQALQIFFKAQVK-DIYCWNAIISGLAL 322
++ A ++ ++ + W A++SG L
Sbjct: 466 LDDAYRLICDMPMRPNAIVWGALLSGCRL 494
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 60/140 (42%)
Query: 197 AFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAH 256
++ LF N +N+++ G + F E +DLF ++ T VL AC
Sbjct: 64 SYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTR 123
Query: 257 LGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAI 316
S + GI +H + G T+L+ +Y+ G + A ++F + + + W A+
Sbjct: 124 ASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTAL 183
Query: 317 ISGLALHGHGYAALKLFGYM 336
SG G A+ LF M
Sbjct: 184 FSGYTTSGRHREAIDLFKKM 203
>AT1G05750.1 | Symbols: PDE247, CLB19 | PDE247 (pigment defective
247) | chr1:1721523-1723025 FORWARD
Length = 500
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 111/186 (59%)
Query: 153 LISGYSSCGEVLAARSIFDKMAIKDIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISW 212
+I YS G AR +FD M K+ V+WN+++ R+G ++ A +F +MP ++ ISW
Sbjct: 115 IIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISW 174
Query: 213 NTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIY 272
M+ G +++G EA+ F EM+ + PDY+ + L+AC +LG+L G+ +H Y +
Sbjct: 175 TAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLS 234
Query: 273 SGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKL 332
++ V+ +L+D+Y +CG +E A Q+F+ + + + WN++I G A +G+ + +L
Sbjct: 235 QDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVY 294
Query: 333 FGYMKK 338
F M++
Sbjct: 295 FRKMQE 300
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 148/328 (45%), Gaps = 45/328 (13%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGK--NCASRIGFAFHGQ 75
W I G +A + +M + G ++ TF LL G + + +G HG
Sbjct: 39 WTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLLHGY 98
Query: 76 TIKTGFYR-HIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMED 134
K G R H+ V TA+I MY A +F+ M K+ V WN+M+D Y +G++++
Sbjct: 99 ACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQVDN 158
Query: 135 AISLFHMMPLKDLSSFNILISGYSSCGEVLAARSIFDKMAIK----DIVSWNSILSACT- 189
A +F MP +DL S+ +I+G+ G A F +M I D V+ + L+ACT
Sbjct: 159 AAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTN 218
Query: 190 ----------------------------------RAGDMEKAFALFQEMPMKNTISWNTM 215
R G +E A +F M + +SWN++
Sbjct: 219 LGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSV 278
Query: 216 LAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGL 275
+ G G E++ F +M+ PD +T T L+AC+H+G +E G++ + +
Sbjct: 279 IVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLR-YFQIMKCDY 337
Query: 276 ASSPHVT--TALMDMYAKCGSIEQALQI 301
SP + L+D+Y++ G +E AL++
Sbjct: 338 RISPRIEHYGCLVDLYSRAGRLEDALKL 365
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 100/225 (44%), Gaps = 10/225 (4%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
MP ++ W +I + G E+A+L + MQ+ G + D L A A G
Sbjct: 166 MPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFG 225
Query: 70 FAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASN 129
H + F ++ V +LI++Y C A ++F NM + +V+WNS++ +A+N
Sbjct: 226 LWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAAN 285
Query: 130 GEMEDAISLFHMMPLK----DLSSFNILISGYSSCGEVLAARSIFDKMAIKDIVS----- 180
G +++ F M K D +F ++ S G V F M +S
Sbjct: 286 GNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEH 345
Query: 181 WNSILSACTRAGDMEKAFALFQEMPMK-NTISWNTMLAGCLQRGQ 224
+ ++ +RAG +E A L Q MPMK N + ++LA C G
Sbjct: 346 YGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHGN 390
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 66/135 (48%), Gaps = 3/135 (2%)
Query: 207 KNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHL--GSLETGI 264
+ T+SW + + + G+ +EA F +M P+++T ++LS C GS G
Sbjct: 34 ETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGD 93
Query: 265 KIHVYAIYSGLASSP-HVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALH 323
+H YA GL + V TA++ MY+K G ++A +F + K+ WN +I G
Sbjct: 94 LLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRS 153
Query: 324 GHGYAALKLFGYMKK 338
G A K+F M +
Sbjct: 154 GQVDNAAKMFDKMPE 168
>AT1G53600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:20001263-20005795 FORWARD
Length = 839
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 93/330 (28%), Positives = 151/330 (45%), Gaps = 34/330 (10%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHG-FRADNYTFPILLKAAGKNCASRI 68
M V W +I + G E ++ M+ G + ++ T ++ KA R
Sbjct: 234 MTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYRE 293
Query: 69 GFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVK-DLVAWNSMLDAYA 127
G HG + MP++ DL NS++ Y+
Sbjct: 294 GSQIHG--------------------------------LVSRMPLEFDLFLGNSLMSMYS 321
Query: 128 SNGEMEDAISLFHMMPLKDLSSFNILISGYSSCGEVLAARSIFDKMAIKDIVSWNSILSA 187
G M +A ++F +M KD S+N LI+G ++ A +F+KM KD+VSW ++
Sbjct: 322 KLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKG 381
Query: 188 CTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTA 247
+ G++ K LF MP K+ I+W M++ + G + EA+ F +M P+ T
Sbjct: 382 FSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTF 441
Query: 248 TSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQV 307
+SVLSA A L L G++IH + + + V +L+ MY KCG+ A +IF
Sbjct: 442 SSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISE 501
Query: 308 KDIYCWNAIISGLALHGHGYAALKLFGYMK 337
+I +N +ISG + +G G ALKLF ++
Sbjct: 502 PNIVSYNTMISGYSYNGFGKKALKLFSMLE 531
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 125/289 (43%), Gaps = 35/289 (12%)
Query: 83 RHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASN------------- 129
R I A+I+ Y + A ++F+ MPV+ ++N+M+ A N
Sbjct: 79 RSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTTSYNAMITAMIKNKCDLGKAYELFCD 138
Query: 130 -------------------GEMEDAISLFHMMPLK--DLSSFNILISGYSSCGEVLAARS 168
G ++A L+ P+K D + N+L+SGY G+ A
Sbjct: 139 IPEKNAVSYATMITGFVRAGRFDEAEFLYAETPVKFRDSVASNVLLSGYLRAGKWNEAVR 198
Query: 169 IFDKMAIKDIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEA 228
+F MA+K++VS +S++ + G + A +LF M +N I+W M+ G + G F +
Sbjct: 199 VFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDG 258
Query: 229 VDLFDEMKTTNCLP-DYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMD 287
LF M+ + + T + AC G +IH L + +LM
Sbjct: 259 FGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMS 318
Query: 288 MYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYM 336
MY+K G + +A +F + KD WN++I+GL A +LF M
Sbjct: 319 MYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKM 367
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 116/221 (52%), Gaps = 9/221 (4%)
Query: 120 NSMLDAYASNGEMEDAISLFHMMPLKDLSSFNILISGYSSCGEVLAARSIFDKMAIKDIV 179
NS + +A NG +++A ++F M + + S+ +IS Y+ G++ A +FD+M ++
Sbjct: 54 NSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTT 113
Query: 180 SWNSILSACTRAG-DMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTT 238
S+N++++A + D+ KA+ LF ++P KN +S+ TM+ G ++ G+F EA L+ E T
Sbjct: 114 SYNAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYAE--TP 171
Query: 239 NCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVT-TALMDMYAKCGSIEQ 297
D + + +LS G ++ ++ G+A V+ ++++ Y K G I
Sbjct: 172 VKFRDSVASNVLLSGYLRAGKWNEAVR-----VFQGMAVKEVVSCSSMVHGYCKMGRIVD 226
Query: 298 ALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMKK 338
A +F + +++ W A+I G G LF M++
Sbjct: 227 ARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQ 267
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 115/209 (55%), Gaps = 15/209 (7%)
Query: 103 DACKMFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMPLKDLSSFNILISGY--SSC 160
+A +F M + +V+W +M+ AYA NG+M A +F MP++ +S+N +I+ + C
Sbjct: 68 EAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTTSYNAMITAMIKNKC 127
Query: 161 GEVLAARSIFDKMAIKDIVSWNSILSACTRAGDMEKAFALFQEMPMK--NTISWNTMLAG 218
++ A +F + K+ VS+ ++++ RAG ++A L+ E P+K ++++ N +L+G
Sbjct: 128 -DLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYAETPVKFRDSVASNVLLSG 186
Query: 219 CLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASS 278
L+ G+++EAV +F M + + ++ +S++ +G + + +++ +
Sbjct: 187 YLRAGKWNEAVRVFQGM----AVKEVVSCSSMVHGYCKMGRI-----VDARSLFDRMTER 237
Query: 279 PHVT-TALMDMYAKCGSIEQALQIFFKAQ 306
+T TA++D Y K G E +F + +
Sbjct: 238 NVITWTAMIDGYFKAGFFEDGFGLFLRMR 266
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 100/249 (40%), Gaps = 35/249 (14%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
MP + W +I + G E+A+ + M ++YTF +L A G
Sbjct: 398 MPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEG 457
Query: 70 FAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASN 129
HG+ +K + VQ +L++MY T DA K+F + ++V++N+M+ Y+ N
Sbjct: 458 LQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYN 517
Query: 130 GEMEDAISLFHMMPLKDLSSFNILISGYSSCGEVLAARSIFDKMAIKDIVSWNSILSACT 189
G + A+ LF M+ SG G V++ ++LSAC
Sbjct: 518 GFGKKALKLFSMLE----------SSGKEPNG-----------------VTFLALLSACV 550
Query: 190 RAGDMEKAFALFQEMPMKNTISWNTMLAGCL-----QRGQFSEAVDLFDEMKTTNCLPDY 244
G ++ + F+ M I C+ + G +A +L M C P
Sbjct: 551 HVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGRSGLLDDASNLISTMP---CKPHS 607
Query: 245 LTATSVLSA 253
S+LSA
Sbjct: 608 GVWGSLLSA 616
>AT1G56570.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:21195804-21197721 FORWARD
Length = 611
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 163/337 (48%), Gaps = 11/337 (3%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
MP +V W +I + +A + M G + +T +LK+ G
Sbjct: 71 MPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGTSPNEFTLSSVLKSCRNMKVLAYG 130
Query: 70 FAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADA-CKMFENMPVKDLVAWNSMLDAYAS 128
HG +K G ++V A++NMY T T +A C +F ++ VK+ V W +++ +
Sbjct: 131 ALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRDIKVKNDVTWTTLITGFTH 190
Query: 129 NGEMEDAISLFHMMPLKDLSS----FNILISGYSSCGEVLAARSIFDKMAIKDIVS---- 180
G+ + ++ M L++ I + +S V + I + + S
Sbjct: 191 LGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQIHASVIKRGFQSNLPV 250
Query: 181 WNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNC 240
NSIL R G + +A F EM K+ I+WNT+++ L+R SEA+ +F ++
Sbjct: 251 MNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISE-LERSDSSEALLMFQRFESQGF 309
Query: 241 LPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQ 300
+P+ T TS+++ACA++ +L G ++H G + + AL+DMYAKCG+I + +
Sbjct: 310 VPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQR 369
Query: 301 IFFK-AQVKDIYCWNAIISGLALHGHGYAALKLFGYM 336
+F + +++ W +++ G HG+G A++LF M
Sbjct: 370 VFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKM 406
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 148/320 (46%), Gaps = 14/320 (4%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTI 77
W +I +G+ + Y M + Y I ++A+ + G H I
Sbjct: 181 WTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQIHASVI 240
Query: 78 KTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAIS 137
K GF ++ V +++++Y ++A F M KDL+ WN+++ + E A+
Sbjct: 241 KRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISELERSDSSE-ALL 299
Query: 138 LFHMMP----LKDLSSFNILISGYSS-----CGEVLAARSIFDKMAIKDIVSWNSILSAC 188
+F + + +F L++ ++ CG+ L R IF + K++ N+++
Sbjct: 300 MFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGR-IFRRGFNKNVELANALIDMY 358
Query: 189 TRAGDMEKAFALFQEM-PMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTA 247
+ G++ + +F E+ +N +SW +M+ G G +EAV+LFD+M ++ PD +
Sbjct: 359 AKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVF 418
Query: 248 TSVLSACAHLGSLETGIK-IHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQ 306
+VLSAC H G +E G+K +V G+ + ++D+ + G I +A ++ +
Sbjct: 419 MAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMP 478
Query: 307 VK-DIYCWNAIISGLALHGH 325
K D W AI+ H H
Sbjct: 479 FKPDESTWGAILGACKAHKH 498
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 123/248 (49%), Gaps = 11/248 (4%)
Query: 83 RHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMM 142
+H + T LI Y +A +F+ MP +D+VAW +M+ YAS+ A FH M
Sbjct: 43 KHHILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEM 102
Query: 143 PLKDLSSFN--ILISGYSSCG--EVLAARSIFDKMAIK-----DIVSWNSILSA-CTRAG 192
+K +S N L S SC +VLA ++ + +K + N++++ T +
Sbjct: 103 -VKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSV 161
Query: 193 DMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLS 252
ME A +F+++ +KN ++W T++ G G + ++ +M N T +
Sbjct: 162 TMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVR 221
Query: 253 ACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYC 312
A A + S+ TG +IH I G S+ V +++D+Y +CG + +A F + + KD+
Sbjct: 222 ASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLIT 281
Query: 313 WNAIISGL 320
WN +IS L
Sbjct: 282 WNTLISEL 289
>AT3G13770.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4519647-4521533 FORWARD
Length = 628
Score = 136 bits (342), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 157/323 (48%), Gaps = 23/323 (7%)
Query: 29 GNAEQAVLTYV----NMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTIKTGFYRH 84
G ++A+L M HG+ A LL A A R G H IKT +
Sbjct: 34 GRLQEALLEMAMLGPEMGFHGYDA-------LLNACLDKRALRDGQRVHAHMIKTRYLPA 86
Query: 85 IFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMPL 144
+++T L+ YG C DA K+ + MP K++V+W +M+ Y+ G +A+++F M
Sbjct: 87 TYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMR 146
Query: 145 KDLSSFNILISGY-SSCGEVLAARSIFDKMAIKDIVSWN---------SILSACTRAGDM 194
D + +SC + A+ K IV WN S+L +AG +
Sbjct: 147 SDGKPNEFTFATVLTSC--IRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQI 204
Query: 195 EKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSAC 254
++A +F+ +P ++ +S ++AG Q G EA+++F + + P+Y+T S+L+A
Sbjct: 205 KEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTAL 264
Query: 255 AHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWN 314
+ L L+ G + H + + L + +L+DMY+KCG++ A ++F + WN
Sbjct: 265 SGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWN 324
Query: 315 AIISGLALHGHGYAALKLFGYMK 337
A++ G + HG G L+LF M+
Sbjct: 325 AMLVGYSKHGLGREVLELFRLMR 347
Score = 121 bits (303), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 153/326 (46%), Gaps = 26/326 (7%)
Query: 6 CNCF---------MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPIL 56
C+C MP V W +I ++ G++ +A+ + M + + +TF +
Sbjct: 100 CDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATV 159
Query: 57 LKAAGKNCASRIGFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDL 116
L + + +G HG +K + HIFV ++L++MY +A ++FE +P +D+
Sbjct: 160 LTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDV 219
Query: 117 VAWNSMLDAYASNGEMEDAISLFHMMPLKDLSSFNILISGYSSCGEVLAARSIFD--KMA 174
V+ +++ YA G E+A+ +FH + + +S + Y+S L+ ++ D K A
Sbjct: 220 VSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVT---YASLLTALSGLALLDHGKQA 276
Query: 175 IKDI---------VSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQF 225
+ V NS++ ++ G++ A LF MP + ISWN ML G + G
Sbjct: 277 HCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLG 336
Query: 226 SEAVDLFDEMKTTNCL-PDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVT-- 282
E ++LF M+ + PD +T +VLS C+H +TG+ I + + P
Sbjct: 337 REVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHY 396
Query: 283 TALMDMYAKCGSIEQALQIFFKAQVK 308
++DM + G I++A + + K
Sbjct: 397 GCIVDMLGRAGRIDEAFEFIKRMPSK 422
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 97/222 (43%), Gaps = 12/222 (5%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
+P +V II + +G E+A+ + + G + T+ LL A G
Sbjct: 214 LPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHG 273
Query: 70 FAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASN 129
H ++ + +Q +LI+MY + A ++F+NMP + ++WN+ML Y+ +
Sbjct: 274 KQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKH 333
Query: 130 GEMEDAISLFHMMPLK-----DLSSFNILISGYSSCGEVLAARSIFDKMAIKDIVS---- 180
G + + LF +M + D + ++SG S +IFD M + +
Sbjct: 334 GLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGT 393
Query: 181 --WNSILSACTRAGDMEKAFALFQEMPMKNTIS-WNTMLAGC 219
+ I+ RAG +++AF + MP K T ++L C
Sbjct: 394 EHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGAC 435
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 47/90 (52%)
Query: 249 SVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVK 308
++L+AC +L G ++H + I + + ++ T L+ Y KC +E A ++ + K
Sbjct: 57 ALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEK 116
Query: 309 DIYCWNAIISGLALHGHGYAALKLFGYMKK 338
++ W A+IS + GH AL +F M +
Sbjct: 117 NVVSWTAMISRYSQTGHSSEALTVFAEMMR 146
>AT5G13270.1 | Symbols: RARE1 | pentatricopeptide (PPR)
repeat-containing protein | chr5:4246954-4249212 REVERSE
Length = 752
Score = 134 bits (337), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 94/337 (27%), Positives = 158/337 (46%), Gaps = 14/337 (4%)
Query: 14 EVRRWNEIIKKHMLVGNAEQAVLT-----YVNMQVHGFRADNYTFPILLKAAGKNCASRI 68
E+ N + + M+ AEQ +L + M G + + + LLK+ A
Sbjct: 143 EMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRALDF 202
Query: 69 GFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYAS 128
G H I+ G + ++T ++NMY A ++F+ M VK VA ++ Y
Sbjct: 203 GRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQ 262
Query: 129 NGEMEDAISLFHMMPLK----DLSSFNILISGYSSCGEVLAARSI---FDKMAIKDIVSW 181
G DA+ LF + + D F++++ +S E+ + I K+ ++ VS
Sbjct: 263 AGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSV 322
Query: 182 NS-ILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNC 240
+ ++ + E A FQE+ N +SW+ +++G Q QF EAV F +++ N
Sbjct: 323 GTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNA 382
Query: 241 -LPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQAL 299
+ + T TS+ AC+ L G ++H AI L S + +AL+ MY+KCG ++ A
Sbjct: 383 SILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDAN 442
Query: 300 QIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYM 336
++F DI W A ISG A +G+ AL+LF M
Sbjct: 443 EVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKM 479
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 147/308 (47%), Gaps = 15/308 (4%)
Query: 29 GNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTIKTGFYRHIFVQ 88
G A A+ +V++ G D++ F ++LKA +G H K G + V
Sbjct: 264 GRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVG 323
Query: 89 TALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMPLKDLS 148
T L++ Y AC+ F+ + + V+W++++ Y + E+A+ F + K+ S
Sbjct: 324 TPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNAS 383
Query: 149 SFN--ILISGYSSCGEVLAARSIFDKM---AIKDIV-----SWNSILSACTRAGDMEKAF 198
N S + +C VLA +I ++ AIK + +++++ ++ G ++ A
Sbjct: 384 ILNSFTYTSIFQACS-VLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDAN 442
Query: 199 ALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLG 258
+F+ M + ++W ++G G SEA+ LF++M + P+ +T +VL+AC+H G
Sbjct: 443 EVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAG 502
Query: 259 SLETGIKIHVYAIYSGLASSPHVT--TALMDMYAKCGSIEQALQIFFKAQVK-DIYCWNA 315
+E G K + + +P + ++D+YA+ G +++AL+ + D W
Sbjct: 503 LVEQG-KHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKC 561
Query: 316 IISGLALH 323
+SG H
Sbjct: 562 FLSGCWTH 569
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 135/307 (43%), Gaps = 10/307 (3%)
Query: 40 NMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTIKTGFYR-HIFVQTALINMYGTL 98
M G +Y++ L +A + + G H + ++ G + +Q ++ MY
Sbjct: 73 EMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDR-MRMGIENPSVLLQNCVLQMYCEC 131
Query: 99 HCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAISLFH-MMPLKDL---SSFNILI 154
DA K+F+ M + V+ +M+ AYA G ++ A+ LF M+ D S + L+
Sbjct: 132 RSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLL 191
Query: 155 SGYSSCGEVLAARSIFDKMAIKDIVSWNSILSACT----RAGDMEKAFALFQEMPMKNTI 210
+ + R I + + S SI + + G + A +F +M +K +
Sbjct: 192 KSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPV 251
Query: 211 SWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYA 270
+ ++ G Q G+ +A+ LF ++ T D + VL ACA L L G +IH
Sbjct: 252 ACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACV 311
Query: 271 IYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAAL 330
GL S V T L+D Y KC S E A + F + + + W+AIISG A+
Sbjct: 312 AKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAV 371
Query: 331 KLFGYMK 337
K F ++
Sbjct: 372 KTFKSLR 378
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 97/203 (47%), Gaps = 13/203 (6%)
Query: 144 LKDLSSFNILISGYS------SCGEVLA---ARSIFDKMAI----KDIVSWNSILSACTR 190
L+++ + +S YS +C E+ + R + D+M + ++ N +L
Sbjct: 71 LQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPSVLLQNCVLQMYCE 130
Query: 191 AGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSV 250
+E A LF EM N +S TM++ ++G +AV LF M + P T++
Sbjct: 131 CRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTL 190
Query: 251 LSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDI 310
L + + +L+ G +IH + I +GL S+ + T +++MY KCG + A ++F + VK
Sbjct: 191 LKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKP 250
Query: 311 YCWNAIISGLALHGHGYAALKLF 333
++ G G ALKLF
Sbjct: 251 VACTGLMVGYTQAGRARDALKLF 273
>AT4G25270.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:12937253-12938836 REVERSE
Length = 527
Score = 134 bits (337), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 92/332 (27%), Positives = 163/332 (49%), Gaps = 23/332 (6%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTI 77
WN +I + +G E A+ Y M G + D +TFP +LKA G + +IG A H +
Sbjct: 163 WNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLV 222
Query: 78 KTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAIS 137
K GF ++V AL+ MY A +F+ +P KD V+WNSML Y +G + +A+
Sbjct: 223 KEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALD 282
Query: 138 LFHMMPLKDLSSFNILISGYSSCGEVLAAR--SIFDKMAIKDIVSW-----NSILSACTR 190
+F +M + + IS S VL+ + I+ + W N+++ ++
Sbjct: 283 IFRLMVQNGIEPDKVAIS--SVLARVLSFKHGRQLHGWVIRRGMEWELSVANALIVLYSK 340
Query: 191 AGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSV 250
G + +A +F +M ++T+SWN +++ + S + F++M N PD +T SV
Sbjct: 341 RGQLGQACFIFDQMLERDTVSWNAIISA---HSKNSNGLKYFEQMHRANAKPDGITFVSV 397
Query: 251 LSACAHLGSLETGIKIHVYAIYS---GLASSPHVTTALMDMYAKCGSIEQALQIFFKAQV 307
LS CA+ G +E G ++ +++ S G+ ++++Y + G +E+A + +
Sbjct: 398 LSLCANTGMVEDGERL--FSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEAYSMIVQEMG 455
Query: 308 KDI--YCWNAIISGLALHGHG----YAALKLF 333
+ W A++ LHG+ AA +LF
Sbjct: 456 LEAGPTVWGALLYACYLHGNTDIGEVAAQRLF 487
Score = 114 bits (285), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 127/262 (48%), Gaps = 16/262 (6%)
Query: 87 VQTALINMYGTLHCTADACKMFENMPVKD--LVAWNSMLDAYASNGEMEDAISLFHMMP- 143
+ + L+ +Y + A ++F+ M +D AWNS++ YA G+ EDA++L+ M
Sbjct: 129 ISSKLVRLYASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAE 188
Query: 144 ---LKDLSSFNILISGYSSCGEVLAARSIFDKMAIK----DIVSWNSILSACTRAGDMEK 196
D +F ++ G V +I + + D+ N+++ + GD+ K
Sbjct: 189 DGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVK 248
Query: 197 AFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAH 256
A +F +P K+ +SWN+ML G L G EA+D+F M PD + +SVL A
Sbjct: 249 ARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVL---AR 305
Query: 257 LGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAI 316
+ S + G ++H + I G+ V AL+ +Y+K G + QA IF + +D WNAI
Sbjct: 306 VLSFKHGRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAI 365
Query: 317 ISGLALHGHGYAALKLFGYMKK 338
IS H LK F M +
Sbjct: 366 ISA---HSKNSNGLKYFEQMHR 384
>AT1G77010.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28942710-28944797 FORWARD
Length = 695
Score = 134 bits (337), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 100/396 (25%), Positives = 173/396 (43%), Gaps = 72/396 (18%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
MP +V N ++ ++L G AE+A+ + + F AD T +LKA + A + G
Sbjct: 150 MPEKDVVTLNSLLHGYILNGYAEEALRLFKELN---FSADAITLTTVLKACAELEALKCG 206
Query: 70 FAFHGQTIKTGFYRHIFVQTALINMY-----------------------------GTLHC 100
H Q + G + ++L+N+Y G +C
Sbjct: 207 KQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANC 266
Query: 101 --TADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMP--------------- 143
++ +F+ + ++ WNSM+ Y +N +A+ LF+ M
Sbjct: 267 GRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMRNETREDSRTLAAVIN 326
Query: 144 -----------------------LKDLSSFNILISGYSSCGEVLAARSIFDKMAIKDIVS 180
+ D+ + L+ YS CG + A +F ++ D +
Sbjct: 327 ACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTIL 386
Query: 181 WNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNC 240
NS++ G ++ A +F+ + K+ ISWN+M G Q G E ++ F +M +
Sbjct: 387 LNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDL 446
Query: 241 LPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQ 300
D ++ +SV+SACA + SLE G ++ A GL S V+++L+D+Y KCG +E +
Sbjct: 447 PTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRR 506
Query: 301 IFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYM 336
+F D WN++ISG A +G G+ A+ LF M
Sbjct: 507 VFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKM 542
Score = 125 bits (314), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 135/277 (48%), Gaps = 39/277 (14%)
Query: 62 KNCASRIGFAFHGQT----IKTGFYRHI-FVQTALINMYGTLHCTADACKMFENMPVKDL 116
++C+SR QT +K GF I V L+ MY A +F+ MP ++
Sbjct: 34 QSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEMPDRNY 93
Query: 117 VAWNSMLDAYASNGEMEDAISLFHMMPLKDLSSFNILISGYSSCGEVLAARSIFDKMAIK 176
+WN+M++ Y ++GE ++ F MMP +D S+N+++SG++ GE+ AR +F+ M K
Sbjct: 94 FSWNTMIEGYMNSGEKGTSLRFFDMMPERDGYSWNVVVSGFAKAGELSVARRLFNAMPEK 153
Query: 177 DIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMK 236
D+V+ NS+L G E+A LF+E+
Sbjct: 154 DVVTLNSLLHGYILNGYAEEALRLFKEL-------------------------------- 181
Query: 237 TTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIE 296
N D +T T+VL ACA L +L+ G +IH + G+ + ++L+++YAKCG +
Sbjct: 182 --NFSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLR 239
Query: 297 QALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLF 333
A + + + D + +A+ISG A G + LF
Sbjct: 240 MASYMLEQIREPDDHSLSALISGYANCGRVNESRGLF 276
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 86/349 (24%), Positives = 147/349 (42%), Gaps = 42/349 (12%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTI 77
WN +I + + N + L N + R D+ T ++ A G H
Sbjct: 287 WNSMISGY-IANNMKMEALVLFNEMRNETREDSRTLAAVINACIGLGFLETGKQMHCHAC 345
Query: 78 KTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAIS 137
K G I V + L++MY +ACK+F + D + NSM+ Y S G ++DA
Sbjct: 346 KFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKR 405
Query: 138 LFHMMPLKDLSSFNILISGYSSCGEVLAARSIFDKMAIKDI----VSWNSILSACT---- 189
+F + K L S+N + +G+S G + F +M D+ VS +S++SAC
Sbjct: 406 VFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISS 465
Query: 190 -------------------------------RAGDMEKAFALFQEMPMKNTISWNTMLAG 218
+ G +E +F M + + WN+M++G
Sbjct: 466 LELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISG 525
Query: 219 CLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKI-HVYAIYSGLAS 277
GQ EA+DLF +M P +T VL+AC + G +E G K+ + G
Sbjct: 526 YATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVP 585
Query: 278 SPHVTTALMDMYAKCGSIEQALQIFFKAQVK-DIYCWNAIISGLALHGH 325
+ ++D+ A+ G +E+A+ + + D W++I+ G +G+
Sbjct: 586 DKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSSILRGCVANGY 634
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 131/302 (43%), Gaps = 68/302 (22%)
Query: 104 ACKMFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMPLK--------------DLSS 149
A ++F MP KD+V NS+L Y NG E+A+ LF + +L +
Sbjct: 143 ARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKELNFSADAITLTTVLKACAELEA 202
Query: 150 F--------NILISG--------------YSSCGEVLAARSIFDKMAIKDIVSWNSILSA 187
ILI G Y+ CG++ A + +++ D S ++++S
Sbjct: 203 LKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISG 262
Query: 188 CTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTA 247
G + ++ LF + I WN+M++G + EA+ LF+EM+ D T
Sbjct: 263 YANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMRNET-REDSRTL 321
Query: 248 TSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGS------------- 294
+V++AC LG LETG ++H +A GL V + L+DMY+KCGS
Sbjct: 322 AAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVES 381
Query: 295 ------------------IEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYM 336
I+ A ++F + + K + WN++ +G + +G L+ F M
Sbjct: 382 YDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQM 441
Query: 337 KK 338
K
Sbjct: 442 HK 443
>AT3G24000.1 | Symbols: | INVOLVED IN: biological_process unknown;
EXPRESSED IN: shoot apex, carpel; EXPRESSED DURING:
petal differentiation and expansion stage; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT3G23330.1); Has 15874 Blast hits to 5333
proteins in 187 species: Archae - 1; Bacteria - 6;
Metazoa - 100; Fungi - 81; Plants - 15349; Viruses - 0;
Other Eukaryotes - 337 (source: NCBI BLink). |
chr3:8672774-8674881 FORWARD
Length = 665
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 132/282 (46%), Gaps = 16/282 (5%)
Query: 69 GFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYAS 128
G H +++ F I + L+NMY +A K+FE MP +D V W +++ Y+
Sbjct: 79 GRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQ 138
Query: 129 NGEMEDAISLFHMMPLKDLSSFNILISG---------YSSCGEVLAARSI---FDKMAIK 176
+ DA+ F+ M S +S CG L + FD
Sbjct: 139 HDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDS---- 194
Query: 177 DIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMK 236
++ +++L TR G M+ A +F + +N +SWN ++AG +R +A++LF M
Sbjct: 195 NVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGML 254
Query: 237 TTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIE 296
P + + S+ AC+ G LE G +H Y I SG L+DMYAK GSI
Sbjct: 255 RDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIH 314
Query: 297 QALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMKK 338
A +IF + +D+ WN++++ A HG G A+ F M++
Sbjct: 315 DARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRR 356
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/338 (24%), Positives = 158/338 (46%), Gaps = 15/338 (4%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
MP + W +I + A+L + M G+ + +T ++KAA G
Sbjct: 121 MPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCG 180
Query: 70 FAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASN 129
HG +K GF ++ V +AL+++Y DA +F+ + ++ V+WN+++ +A
Sbjct: 181 HQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARR 240
Query: 130 GEMEDAISLFHMMPLKD-----LSSFNILISGYSSCGEVLAARSIFDKM--AIKDIVSW- 181
E A+ LF M L+D S+ L SS G + + + M + + +V++
Sbjct: 241 SGTEKALELFQGM-LRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFA 299
Query: 182 -NSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNC 240
N++L ++G + A +F + ++ +SWN++L Q G EAV F+EM+
Sbjct: 300 GNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGI 359
Query: 241 LPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQ 300
P+ ++ SVL+AC+H G L+ G + G+ ++D+ + G + +AL+
Sbjct: 360 RPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALR 419
Query: 301 IFFKAQVKDIYC-WNAIISGLALHGH----GYAALKLF 333
+ ++ W A+++ +H + YAA +F
Sbjct: 420 FIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVF 457
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 43/89 (48%)
Query: 248 TSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQV 307
++L C L G +H + + S + L++MYAKCGS+E+A ++F K
Sbjct: 64 NTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQ 123
Query: 308 KDIYCWNAIISGLALHGHGYAALKLFGYM 336
+D W +ISG + H AL F M
Sbjct: 124 RDFVTWTTLISGYSQHDRPCDALLFFNQM 152
>AT5G40410.1 | Symbols: | INVOLVED IN: biological_process unknown;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT1G08070.1); Has 12213 Blast hits to 4641
proteins in 127 species: Archae - 0; Bacteria - 0;
Metazoa - 61; Fungi - 12; Plants - 12006; Viruses - 0;
Other Eukaryotes - 134 (source: NCBI BLink). |
chr5:16171385-16173211 FORWARD
Length = 608
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 144/291 (49%), Gaps = 11/291 (3%)
Query: 57 LKAAGKNCAS-RIGFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKD 115
L AA K+C S + H + +K+ YRH F+ L+ Y L A K+F+ MP +D
Sbjct: 37 LIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMPERD 96
Query: 116 LVAWNSMLDAYASNGEMEDAISLFHMMPLKDLS------SFNILISGYSSCGEVLAARSI 169
LV+WNS++ Y+ G + + M + ++ +F +IS G R I
Sbjct: 97 LVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCI 156
Query: 170 FDKM----AIKDIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQF 225
+ ++++ N+ ++ + GD+ + LF+++ +KN +SWNTM+ LQ G
Sbjct: 157 HGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLA 216
Query: 226 SEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTAL 285
+ + F+ + PD T +VL +C +G + IH ++ G + + +TTAL
Sbjct: 217 EKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTAL 276
Query: 286 MDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYM 336
+D+Y+K G +E + +F + D W A+++ A HG G A+K F M
Sbjct: 277 LDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELM 327
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 127/265 (47%), Gaps = 12/265 (4%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQ--AVLTYVNMQVHGFRADNYTFPILLKAAGKNCASR 67
MP ++ WN +I + G + VL+ + + GFR + TF ++ A +
Sbjct: 92 MPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKE 151
Query: 68 IGFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYA 127
G HG +K G + V A IN YG +CK+FE++ +K+LV+WN+M+ +
Sbjct: 152 EGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHL 211
Query: 128 SNGEMEDAISLFHMMPL----KDLSSFNILISGYSSCGEVLAARSI-----FDKMAIKDI 178
NG E ++ F+M D ++F ++ G V A+ I F +
Sbjct: 212 QNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKC 271
Query: 179 VSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTT 238
++ ++L ++ G +E + +F E+ ++++W MLA G +A+ F+ M
Sbjct: 272 IT-TALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHY 330
Query: 239 NCLPDYLTATSVLSACAHLGSLETG 263
PD++T T +L+AC+H G +E G
Sbjct: 331 GISPDHVTFTHLLNACSHSGLVEEG 355
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 103/213 (48%), Gaps = 12/213 (5%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVH-GFRADNYTFPILLKAAGKNCASRIGFAFHGQT 76
WN +I H+ G AE+ L Y NM G D TF +L++ R+ HG
Sbjct: 203 WNTMIVIHLQNGLAEKG-LAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLI 261
Query: 77 IKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAI 136
+ GF + + TAL+++Y L D+ +F + D +AW +ML AYA++G DAI
Sbjct: 262 MFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAI 321
Query: 137 SLFHMMPLKDLS----SFNILISGYSSCGEVLAARSIFDKMAIKDIVS-----WNSILSA 187
F +M +S +F L++ S G V + F+ M+ + + ++ ++
Sbjct: 322 KHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDL 381
Query: 188 CTRAGDMEKAFALFQEMPMKNTIS-WNTMLAGC 219
R+G ++ A+ L +EMPM+ + W +L C
Sbjct: 382 LGRSGLLQDAYGLIKEMPMEPSSGVWGALLGAC 414
>AT5G40405.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT5G66520.1); Has
12548 Blast hits to 5076 proteins in 168 species: Archae
- 0; Bacteria - 2; Metazoa - 87; Fungi - 66; Plants -
12146; Viruses - 0; Other Eukaryotes - 247 (source: NCBI
BLink). | chr5:16169315-16171153 FORWARD
Length = 612
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/333 (28%), Positives = 152/333 (45%), Gaps = 44/333 (13%)
Query: 19 NEIIKKHMLVGNAEQAVLTYVNMQVHG--FRADNYTFPILLKAAGKNCASRIGFAFHGQT 76
N +I+ H E++ Y + G + DNYT L++A G HG T
Sbjct: 75 NSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQVHGMT 134
Query: 77 IKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAI 136
I+ GF VQT LI++Y L C K+F ++P D V +M+ A A G++ A
Sbjct: 135 IRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFAR 194
Query: 137 SLFHMMPLKDLSSFNILISGYSSCGEVLAARSIFDKMAIKDI----VSWNSILSACT--- 189
LF MP +D ++N +ISGY+ GE A ++F M ++ + V+ S+LSACT
Sbjct: 195 KLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLG 254
Query: 190 --------------------------------RAGDMEKAFALFQEMPMKNTISWNTMLA 217
+ GDMEKA +F M KN +W++ L
Sbjct: 255 ALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALN 314
Query: 218 GCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLAS 277
G G + ++LF MK P+ +T SVL C+ +G ++ G + H ++ +
Sbjct: 315 GLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQR-HFDSMRNEFGI 373
Query: 278 SPHVT--TALMDMYAKCGSIEQALQIFFKAQVK 308
P + L+D+YA+ G +E A+ I + +K
Sbjct: 374 EPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMK 406
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 114/186 (61%)
Query: 153 LISGYSSCGEVLAARSIFDKMAIKDIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISW 212
LIS Y+ G + + +F+ + D V ++++AC R GD+ A LF+ MP ++ I+W
Sbjct: 149 LISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAW 208
Query: 213 NTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIY 272
N M++G Q G+ EA+++F M+ + + SVLSAC LG+L+ G H Y
Sbjct: 209 NAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIER 268
Query: 273 SGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKL 332
+ + + + T L+D+YAKCG +E+A+++F+ + K++Y W++ ++GLA++G G L+L
Sbjct: 269 NKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLEL 328
Query: 333 FGYMKK 338
F MK+
Sbjct: 329 FSLMKQ 334
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 98/217 (45%), Gaps = 10/217 (4%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
MP + WN +I + VG + +A+ + MQ+ G + + +L A + A G
Sbjct: 200 MPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQG 259
Query: 70 FAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASN 129
H + + + T L+++Y A ++F M K++ W+S L+ A N
Sbjct: 260 RWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMN 319
Query: 130 GEMEDAISLFHMMPLKDLS----SFNILISGYSSCGEVLAARSIFDKMAIK-----DIVS 180
G E + LF +M ++ +F ++ G S G V + FD M + +
Sbjct: 320 GFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEH 379
Query: 181 WNSILSACTRAGDMEKAFALFQEMPMK-NTISWNTML 216
+ ++ RAG +E A ++ Q+MPMK + W+++L
Sbjct: 380 YGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLL 416
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 48/97 (49%)
Query: 242 PDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQI 301
PD T ++ AC L ETG+++H I G + PHV T L+ +YA+ G ++ ++
Sbjct: 106 PDNYTVNFLVQACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKV 165
Query: 302 FFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMKK 338
F D C A+++ A G A KLF M +
Sbjct: 166 FNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMPE 202
>AT1G18485.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:6363172-6366084 FORWARD
Length = 970
Score = 132 bits (332), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 157/320 (49%), Gaps = 15/320 (4%)
Query: 17 RWNEIIKKHMLVGNAEQAVLTYVNM-QVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQ 75
+WN +I + ++ + T++ M D++T+P ++KA IG A HG
Sbjct: 153 QWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGL 212
Query: 76 TIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDA 135
+KTG +FV AL++ YGT DA ++F+ MP ++LV+WNSM+ ++ NG E++
Sbjct: 213 VVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEES 272
Query: 136 ISLF-HMMP-------LKDLSSFNILISGYSSCGEVLAARSIFD---KMAI-KDIVSWNS 183
L MM + D+++ ++ + E+ + + K+ + K++V N+
Sbjct: 273 FLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNA 332
Query: 184 ILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEM--KTTNCL 241
++ ++ G + A +F+ KN +SWNTM+ G G D+ +M +
Sbjct: 333 LMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVK 392
Query: 242 PDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQI 301
D +T + + C H L + ++H Y++ + V A + YAKCGS+ A ++
Sbjct: 393 ADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRV 452
Query: 302 FFKAQVKDIYCWNAIISGLA 321
F + K + WNA+I G A
Sbjct: 453 FHGIRSKTVNSWNALIGGHA 472
Score = 121 bits (303), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 167/328 (50%), Gaps = 21/328 (6%)
Query: 12 SLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFA 71
S V WN +I H + ++ ++ M++ G D++T LL A K + R+G
Sbjct: 458 SKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKE 517
Query: 72 FHGQTIKTGFYRHIFVQTALINMY---GTLHCTADACKMFENMPVKDLVAWNSMLDAYAS 128
HG I+ R +FV +++++Y G L CT A +F+ M K LV+WN+++ Y
Sbjct: 518 VHGFIIRNWLERDLFVYLSVLSLYIHCGEL-CTVQA--LFDAMEDKSLVSWNTVITGYLQ 574
Query: 129 NGEMEDAISLFHMMPLKDLSSFNI-LISGYSSCGEVLAARSIFDK--MAIKDIVSWNSIL 185
NG + A+ +F M L + I ++ + +C + + R + A+K ++ ++ +
Sbjct: 575 NGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFI 634
Query: 186 SACT------RAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTN 239
AC+ + G + ++ +F + K+T SWN M+ G G EA+ LF+EM+ T
Sbjct: 635 -ACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTG 693
Query: 240 CLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVT--TALMDMYAKCGSIEQ 297
PD LT VL+AC H G + G++ ++ + S P++ ++DM + G +++
Sbjct: 694 HNPDDLTFLGVLTACNHSGLIHEGLR-YLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDK 752
Query: 298 ALQIFFK--AQVKDIYCWNAIISGLALH 323
AL++ + ++ D+ W +++S +H
Sbjct: 753 ALRVVAEEMSEEADVGIWKSLLSSCRIH 780
Score = 110 bits (276), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 80/342 (23%), Positives = 151/342 (44%), Gaps = 16/342 (4%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVH----GFRADNYTFPILLKAAGKNCA 65
MP + WN +I+ G +E++ L M F D T +L +
Sbjct: 248 MPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCARERE 307
Query: 66 SRIGFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDA 125
+G HG +K + + + AL++MY C +A +F+ K++V+WN+M+
Sbjct: 308 IGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGG 367
Query: 126 YASNGEMEDAISLFHMMPL--KDLSSFNILI---------SGYSSCGEVLAARSIFDKMA 174
+++ G+ + M +D+ + + I + + L S+ +
Sbjct: 368 FSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFV 427
Query: 175 IKDIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDE 234
++V+ N+ +++ + G + A +F + K SWN ++ G Q ++D +
Sbjct: 428 YNELVA-NAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQ 486
Query: 235 MKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGS 294
MK + LPD T S+LSAC+ L SL G ++H + I + L V +++ +Y CG
Sbjct: 487 MKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGE 546
Query: 295 IEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYM 336
+ +F + K + WN +I+G +G AL +F M
Sbjct: 547 LCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQM 588
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 134/296 (45%), Gaps = 14/296 (4%)
Query: 55 ILLKAAGKNCASRIGFAFHGQTIKTGFYRHIFVQ-TALINMYGTLHCTADACKMFENMPV 113
+LL+A+GK +G H + R+ V T +I MY D+ +F+ +
Sbjct: 89 LLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRS 148
Query: 114 KDLVAWNSMLDAYASNGEMEDAISLFHMMP-----LKDLSSFNILI---SGYSSCGEVLA 165
K+L WN+++ +Y+ N ++ + F M L D ++ +I +G S G LA
Sbjct: 149 KNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLA 208
Query: 166 ARSIFDKMA-IKDIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQ 224
+ K ++D+ N+++S G + A LF MP +N +SWN+M+ G
Sbjct: 209 VHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGF 268
Query: 225 FSEAVDLFDEMKTTNC----LPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPH 280
E+ L EM N +PD T +VL CA + G +H +A+ L
Sbjct: 269 SEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELV 328
Query: 281 VTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYM 336
+ ALMDMY+KCG I A IF K++ WN ++ G + G + + M
Sbjct: 329 LNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQM 384
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 131/276 (47%), Gaps = 10/276 (3%)
Query: 72 FHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGE 131
H ++K F + V A + Y + A ++F + K + +WN+++ +A + +
Sbjct: 417 LHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSND 476
Query: 132 MEDAISLFHMMPLKDL--SSFNILISGYSSCGEVLAARS-------IFDKMAIKDIVSWN 182
++ M + L SF + S S+C ++ + R I +D+ +
Sbjct: 477 PRLSLDAHLQMKISGLLPDSFTV-CSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYL 535
Query: 183 SILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLP 242
S+LS G++ ALF M K+ +SWNT++ G LQ G A+ +F +M
Sbjct: 536 SVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQL 595
Query: 243 DYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIF 302
++ V AC+ L SL G + H YA+ L + +L+DMYAK GSI Q+ ++F
Sbjct: 596 CGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVF 655
Query: 303 FKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMKK 338
+ K WNA+I G +HG A+KLF M++
Sbjct: 656 NGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQR 691
>AT3G51320.1 | Symbols: | INVOLVED IN: biological_process unknown;
EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 6
growth stages; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: binding
(TAIR:AT3G62890.1); Has 12158 Blast hits to 4373
proteins in 95 species: Archae - 0; Bacteria - 0;
Metazoa - 23; Fungi - 18; Plants - 12009; Viruses - 0;
Other Eukaryotes - 108 (source: NCBI BLink). |
chr3:19049853-19051445 REVERSE
Length = 530
Score = 132 bits (331), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 94/318 (29%), Positives = 137/318 (43%), Gaps = 62/318 (19%)
Query: 19 NEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTIK 78
N + K +++ + +QA+ Y ++ GF D+YTF L+ K C G HGQ IK
Sbjct: 87 NPVFKAYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIK 146
Query: 79 TGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAISL 138
G C +PV++ SL
Sbjct: 147 HG------------------------CDQV--LPVQN---------------------SL 159
Query: 139 FHMMPLKDLSSFNILISGYSSCGEVLAARSIFDKMAIKDIVSWNSILSACTRAGDMEKAF 198
HM Y+ CG + A+ +F ++ +DIVSWNSI++ R GD+ A
Sbjct: 160 MHM---------------YTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAH 204
Query: 199 ALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLG 258
LF EMP KN ISWN M++ L ++ LF EM + T +L+AC
Sbjct: 205 KLFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSA 264
Query: 259 SLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIIS 318
L+ G +H I + L SS + TAL+DMY KC + A +IF +++ WN +I
Sbjct: 265 RLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMIL 324
Query: 319 GLALHGHGYAALKLFGYM 336
LHG L+LF M
Sbjct: 325 AHCLHGRPEGGLELFEAM 342
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 102/226 (45%), Gaps = 9/226 (3%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
MP + WN +I ++ N ++ + M GF+ + T +LL A G++ + G
Sbjct: 210 MPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEG 269
Query: 70 FAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASN 129
+ H I+T + + TALI+MYG A ++F+++ +++ V WN M+ A+ +
Sbjct: 270 RSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLH 329
Query: 130 GEMEDAISLFHMMP----LKDLSSFNILISGYSSCGEVLAARSIFDKMAIKDIVSWNSIL 185
G E + LF M D +F ++ G + G V +S + M + + N
Sbjct: 330 GRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGH 389
Query: 186 SAC-----TRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFS 226
C + AG E+A + +P ++ +T A L +F+
Sbjct: 390 QWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFT 435
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 75/161 (46%), Gaps = 7/161 (4%)
Query: 181 WNS-----ILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEM 235
W+S +L + +R GD ++++ + N + L +A+ + ++
Sbjct: 52 WDSSWAIRLLKSSSRFGDSSYTVSIYRSI--GKLYCANPVFKAYLVSSSPKQALGFYFDI 109
Query: 236 KTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSI 295
+PD T S++S +++G H AI G V +LM MY CG++
Sbjct: 110 LRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHGCDQVLPVQNSLMHMYTCCGAL 169
Query: 296 EQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYM 336
+ A ++F + +DI WN+II+G+ +G AA KLF M
Sbjct: 170 DLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEM 210
>AT4G37170.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:17498580-17500655 REVERSE
Length = 691
Score = 132 bits (331), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 144/327 (44%), Gaps = 40/327 (12%)
Query: 52 TFPILLKAAGKNCASRIGFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENM 111
T+ L++ + A G H +GF I + L+ MY DA K+F+ M
Sbjct: 87 TYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEM 146
Query: 112 PVKDLVAWNSMLDAYASNGEMEDAISLFHMMPLKDLSSFNILISGY---SSCGEVLAARS 168
P +DL +WN M++ YA G +E+A LF M KD S+ +++GY E L S
Sbjct: 147 PNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYS 206
Query: 169 IFDKMA-------------------------------------IKDIVSWNSILSACTRA 191
+ ++ D V W+S++ +
Sbjct: 207 LMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKC 266
Query: 192 GDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVL 251
G +++A +F ++ K+ +SW +M+ + ++ E LF E+ + P+ T VL
Sbjct: 267 GCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVL 326
Query: 252 SACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIY 311
+ACA L + E G ++H Y G +++L+DMY KCG+IE A + D+
Sbjct: 327 NACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLV 386
Query: 312 CWNAIISGLALHGHGYAALKLFGYMKK 338
W ++I G A +G ALK F + K
Sbjct: 387 SWTSLIGGCAQNGQPDEALKYFDLLLK 413
Score = 117 bits (294), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 153/324 (47%), Gaps = 21/324 (6%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQ-VHGFRADNYTFPILLKAAGKNCASRIGFAFHGQT 76
W ++ ++ E+A++ Y MQ V R + +T I + AA R G HG
Sbjct: 185 WTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHI 244
Query: 77 IKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAI 136
++ G + ++L++MYG C +A +F+ + KD+V+W SM+D Y + +
Sbjct: 245 VRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGF 304
Query: 137 SLFHMMPLKDLSSFNILISGY-SSCGEVLA-----------ARSIFDKMAIKDIVSWNSI 184
SLF + +G ++C ++ R FD + +S+
Sbjct: 305 SLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFAS----SSL 360
Query: 185 LSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDY 244
+ T+ G++E A + P + +SW +++ GC Q GQ EA+ FD + + PD+
Sbjct: 361 VDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDH 420
Query: 245 LTATSVLSACAHLGSLETGIKIHVYAIYSG--LASSPHVTTALMDMYAKCGSIEQALQIF 302
+T +VLSAC H G +E G++ Y+I L+ + T L+D+ A+ G EQ +
Sbjct: 421 VTFVNVLSACTHAGLVEKGLEF-FYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVI 479
Query: 303 FKAQVK-DIYCWNAIISGLALHGH 325
+ +K + W +++ G + +G+
Sbjct: 480 SEMPMKPSKFLWASVLGGCSTYGN 503
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/298 (21%), Positives = 120/298 (40%), Gaps = 36/298 (12%)
Query: 14 EVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFH 73
+V W +I ++ + + + R + YTF +L A +G H
Sbjct: 283 DVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVH 342
Query: 74 GQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEME 133
G + GF + F ++L++MY A + + P DLV+W S++ A NG+ +
Sbjct: 343 GYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPD 402
Query: 134 DAISLFHMMPLKDLSSFNILISGYSSCGEVLAARSIFDKMAIKDIVSWNSILSACTRAGD 193
+A+ F ++ L SG D V++ ++LSACT AG
Sbjct: 403 EALKYFDLL----------LKSGTKP-----------------DHVTFVNVLSACTHAGL 435
Query: 194 MEKAFALFQEMPMKNTISWNTMLAGCL-----QRGQFSEAVDLFDEMKTTNCLPDYLTAT 248
+EK F + K+ +S + CL + G+F + + EM P
Sbjct: 436 VEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMK---PSKFLWA 492
Query: 249 SVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQ 306
SVL C+ G+++ + ++ +P + ++YA G E+ ++ + Q
Sbjct: 493 SVLGGCSTYGNIDLAEEA-AQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQ 549
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 54/112 (48%), Gaps = 4/112 (3%)
Query: 225 FSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTA 284
EAV L K P T +++ C+ +LE G K+H + SG +
Sbjct: 70 LREAVQLLGRAKK----PPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNR 125
Query: 285 LMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYM 336
L+ MYAKCGS+ A ++F + +D+ WN +++G A G A KLF M
Sbjct: 126 LLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEM 177
>AT3G58590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:21666262-21668487 FORWARD
Length = 741
Score = 132 bits (331), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 101/360 (28%), Positives = 157/360 (43%), Gaps = 40/360 (11%)
Query: 12 SLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFA 71
S ++ WN II N +A+ +V+M HGF + T+ +L + G
Sbjct: 278 SWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQ 337
Query: 72 FHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGE 131
HG IK G I + ALI+ Y D+ F+ + K++V WN++L YA N +
Sbjct: 338 IHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYA-NKD 396
Query: 132 MEDAISLFHMM----------------------PLKDLSSFNILISGYSSCGEVLAA--R 167
+SLF M L+ L S I+ GY VL++ R
Sbjct: 397 GPICLSLFLQMLQMGFRPTEYTFSTALKSCCVTELQQLHSV-IVRMGYEDNDYVLSSLMR 455
Query: 168 SIFDKMAIKD-------------IVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNT 214
S + D +V N + +R G ++ L + +T+SWN
Sbjct: 456 SYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNI 515
Query: 215 MLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSG 274
+A C + E ++LF M +N PD T S+LS C+ L L G IH +
Sbjct: 516 AIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTD 575
Query: 275 LA-SSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLF 333
+ + V L+DMY KCGSI +++F + + K++ W A+IS L +HG+G AL+ F
Sbjct: 576 FSCADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLITWTALISCLGIHGYGQEALEKF 635
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 97/333 (29%), Positives = 156/333 (46%), Gaps = 12/333 (3%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
MP +N IIK + G+ ++A + M+ G+ + T LL A + R G
Sbjct: 75 MPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLLSCASLDV--RAG 132
Query: 70 FAFHGQTIKTG-FYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYAS 128
HG ++K G F FV T L+ +YG L A ++FE+MP K L WN M+
Sbjct: 133 TQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGH 192
Query: 129 NGEMEDAISLFH----MMPLKDLSSFNILISGYSSCGEVLAARSIFDKMAIK----DIVS 180
G +++ + F M SSF ++ G S ++ ++ + K +I
Sbjct: 193 RGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISV 252
Query: 181 WNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNC 240
NS++SA + G+ A +FQ+ + +SWN ++ + +A+ LF M
Sbjct: 253 VNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGF 312
Query: 241 LPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQ 300
P+ T SVL + + L G +IH I +G + + AL+D YAKCG++E +
Sbjct: 313 SPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRL 372
Query: 301 IFFKAQVKDIYCWNAIISGLALHGHGYAALKLF 333
F + K+I CWNA++SG A + G L LF
Sbjct: 373 CFDYIRDKNIVCWNALLSGYA-NKDGPICLSLF 404
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 122/270 (45%), Gaps = 7/270 (2%)
Query: 76 TIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDA 135
T+ + + ++V +I++Y L + A K+F+ MP ++ V++N+++ Y+ G+++ A
Sbjct: 40 TLCSVLLQPVYVCNNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKA 99
Query: 136 ISLFHMMPLKDLSSFNILISGYSSC-------GEVLAARSIFDKMAIKDIVSWNSILSAC 188
+F M +SG SC G L S+ + + D +L
Sbjct: 100 WGVFSEMRYFGYLPNQSTVSGLLSCASLDVRAGTQLHGLSLKYGLFMADAFVGTCLLCLY 159
Query: 189 TRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTAT 248
R +E A +F++MP K+ +WN M++ RG E + F E+ +
Sbjct: 160 GRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFL 219
Query: 249 SVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVK 308
VL + + L+ ++H A GL V +L+ Y KCG+ A ++F A
Sbjct: 220 GVLKGVSCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSW 279
Query: 309 DIYCWNAIISGLALHGHGYAALKLFGYMKK 338
DI WNAII A + ALKLF M +
Sbjct: 280 DIVSWNAIICATAKSENPLKALKLFVSMPE 309
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 88/212 (41%), Gaps = 10/212 (4%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTI 77
WN I E+ + + +M R D YTF +L K C +G + HG
Sbjct: 513 WNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLIT 572
Query: 78 KTGFY-RHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAI 136
KT F FV LI+MYG K+FE K+L+ W +++ +G ++A+
Sbjct: 573 KTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLITWTALISCLGIHGYGQEAL 632
Query: 137 SLF-HMMPL---KDLSSFNILISGYSSCGEVLAARSIFDKM----AIKDIVSWNSILSAC 188
F + L D SF +++ G V +F KM ++ + +
Sbjct: 633 EKFKETLSLGFKPDRVSFISILTACRHGGMVKEGMGLFQKMKDYGVEPEMDHYRCAVDLL 692
Query: 189 TRAGDMEKAFALFQEMPMK-NTISWNTMLAGC 219
R G +++A L +EMP + W T L GC
Sbjct: 693 ARNGYLKEAEHLIREMPFPADAPVWRTFLDGC 724
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 79/369 (21%), Positives = 148/369 (40%), Gaps = 49/369 (13%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
MP + WN ++ G ++ + + + G +F +LK G +C +
Sbjct: 175 MPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLK--GVSCVKDLD 232
Query: 70 FA--FHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYA 127
+ H K G I V +LI+ YG T A +MF++ D+V+WN+++ A A
Sbjct: 233 ISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATA 292
Query: 128 SNGEMEDAISLFHMMPLKDLSSFN---ILISGYSSCGEVLAARSIFDKMAIKD-----IV 179
+ A+ LF MP S + + G SS ++L+ M IK+ IV
Sbjct: 293 KSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIV 352
Query: 180 SWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTN 239
N+++ + G++E + F + KN + WN +L+G + + LF +M
Sbjct: 353 LGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYANKDG-PICLSLFLQMLQMG 411
Query: 240 CLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKC------- 292
P T ++ L +C + L+ ++H + G + +V ++LM YAK
Sbjct: 412 FRPTEYTFSTALKSCC-VTELQ---QLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDAL 467
Query: 293 -------------------------GSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGY 327
G +++++ + D WN I+ + +
Sbjct: 468 LLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHE 527
Query: 328 AALKLFGYM 336
++LF +M
Sbjct: 528 EVIELFKHM 536
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/325 (20%), Positives = 126/325 (38%), Gaps = 48/325 (14%)
Query: 38 YVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTIKTGFYRHIFVQTALINMYGT 97
++ M GFR YTF LK+ C + + H ++ G+ + +V ++L+ Y
Sbjct: 404 FLQMLQMGFRPTEYTFSTALKSC---CVTELQ-QLHSVIVRMGYEDNDYVLSSLMRSYAK 459
Query: 98 LHCTADACKMFE--NMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMPLKDLSSFNILIS 155
DA + + + P +V N + Y+ G+ +++ L + D S+NI I+
Sbjct: 460 NQLMNDALLLLDWASGPTS-VVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIA 518
Query: 156 GYSSCGEVLAARSIFDKMAIKDI----VSWNSILSACTR--------------------- 190
S +F M +I ++ SILS C++
Sbjct: 519 ACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSC 578
Query: 191 ---------------AGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEM 235
G + +F+E KN I+W +++ G EA++ F E
Sbjct: 579 ADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLITWTALISCLGIHGYGQEALEKFKET 638
Query: 236 KTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSI 295
+ PD ++ S+L+AC H G ++ G+ + G+ +D+ A+ G +
Sbjct: 639 LSLGFKPDRVSFISILTACRHGGMVKEGMGLFQKMKDYGVEPEMDHYRCAVDLLARNGYL 698
Query: 296 EQALQIFFKAQVK-DIYCWNAIISG 319
++A + + D W + G
Sbjct: 699 KEAEHLIREMPFPADAPVWRTFLDG 723
>AT1G10330.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3388747-3390150 FORWARD
Length = 467
Score = 131 bits (329), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 159/322 (49%), Gaps = 47/322 (14%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTI 77
+N +I+ ++ G + ++ + +M + +N TFP L+KAA + + G A HGQ +
Sbjct: 54 YNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQAL 113
Query: 78 KTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAIS 137
K GF FVQT+ + YG + + KMF+++ +VA NS+LDA NGEM+ A
Sbjct: 114 KRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFE 173
Query: 138 LFHMMPLKDLSSFNILISGYSSCGEVLAARSIFDKMAIKD--IVSWN-----SILSACT- 189
F MP+ D+ S+ +I+G+S G A +F +M + +++ N S+LS+C
Sbjct: 174 YFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCAN 233
Query: 190 ------------------------------------RAGDMEKAFALFQEMPMKNTISWN 213
+AGD+E A +F ++ K +WN
Sbjct: 234 FDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWN 293
Query: 214 TMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKI--HVYAI 271
+++ G+ +A+++F+ MK++ P+ +T ++L+ACA ++ GI++ + +
Sbjct: 294 AIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSICSE 353
Query: 272 YSGLASSPHVTTALMDMYAKCG 293
Y + +S H ++D+ + G
Sbjct: 354 YKIIPTSEHY-GCVVDLIGRAG 374
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/186 (37%), Positives = 110/186 (59%), Gaps = 5/186 (2%)
Query: 157 YSSCGEVLAARSIFDKMAIKDIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTML 216
Y G++ ++R +FD + +V+ NS+L AC R G+M+ AF FQ MP+ + +SW T++
Sbjct: 131 YGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFEYFQRMPVTDVVSWTTVI 190
Query: 217 AGCLQRGQFSEAVDLFDEM---KTTNCLPDYLTATSVLSACAHL--GSLETGIKIHVYAI 271
G ++G ++A+ +F EM + P+ T SVLS+CA+ G + G +IH Y +
Sbjct: 191 NGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCANFDQGGIRLGKQIHGYVM 250
Query: 272 YSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALK 331
+ + + TAL+DMY K G +E AL IF + + K + WNAIIS LA +G AL+
Sbjct: 251 SKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWNAIISALASNGRPKQALE 310
Query: 332 LFGYMK 337
+F MK
Sbjct: 311 MFEMMK 316
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 64/161 (39%), Gaps = 31/161 (19%)
Query: 207 KNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKI 266
K +NT++ L G++ ++ LF M ++ P+ LT S++ A S+ G+ +
Sbjct: 49 KTKCVYNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVAL 108
Query: 267 HVYAIYSGLASSPHVTTALMDMYAKCGSIEQ----------------------------- 297
H A+ G P V T+ + Y + G +E
Sbjct: 109 HGQALKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEM 168
Query: 298 --ALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYM 336
A + F + V D+ W +I+G + G AL +FG M
Sbjct: 169 DYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEM 209
>AT2G02750.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:771641-773482 REVERSE
Length = 613
Score = 130 bits (328), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 98/376 (26%), Positives = 171/376 (45%), Gaps = 50/376 (13%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
MP + N + + G A + + +V G ++ T +L G G
Sbjct: 92 MPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCGDIEG---G 148
Query: 70 FAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASN 129
H +K+GF ++V T+L++MY A +MFE +P K +V +N+ + N
Sbjct: 149 MQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMEN 208
Query: 130 GEMEDAISLFHMM------PLKDLSSFNI------------------------------- 152
G M S+F++M D++ N
Sbjct: 209 GVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMV 268
Query: 153 ---LISGYSSCGEVLAARSIFDKMA-IKDIVSWNSILSACTRAGDMEKAFALFQEMPMK- 207
LI YS C +A +F ++ ++++SWNS++S G E A LF+++ +
Sbjct: 269 GTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEG 328
Query: 208 ---NTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGI 264
++ +WN++++G Q G+ EA F+ M + +P TS+LSAC+ + +L+ G
Sbjct: 329 LKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGK 388
Query: 265 KIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIF--FKAQVKDIYCWNAIISGLAL 322
+IH + I + V T+L+DMY KCG A +IF F+ + KD WN +ISG
Sbjct: 389 EIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGK 448
Query: 323 HGHGYAALKLFGYMKK 338
HG +A+++F +++
Sbjct: 449 HGECESAIEIFELLRE 464
Score = 128 bits (322), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 155/296 (52%), Gaps = 15/296 (5%)
Query: 49 DNYTFPILLKAAGKNCASRIGFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMF 108
+ +TFP LLK+ K G H Q +KTGF+ +F TAL++MY + DA K+
Sbjct: 30 NKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKVL 89
Query: 109 ENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMPLKDLSSFNILI-SGYSSCGEV---- 163
+ MP + + + N+ + NG DA +F + ++ + S CG++
Sbjct: 90 DEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCGDIEGGM 149
Query: 164 ----LAARSIFDKMAIKDIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGC 219
LA +S F+ ++ S++S +R G+ A +F+++P K+ +++N ++G
Sbjct: 150 QLHCLAMKSGFE----MEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGL 205
Query: 220 LQRGQFSEAVDLFDEM-KTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASS 278
++ G + +F+ M K ++ P+ +T + ++ACA L +L+ G ++H +
Sbjct: 206 MENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFE 265
Query: 279 PHVTTALMDMYAKCGSIEQALQIFFKAQ-VKDIYCWNAIISGLALHGHGYAALKLF 333
V TAL+DMY+KC + A +F + + +++ WN++ISG+ ++G A++LF
Sbjct: 266 TMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELF 321
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 134/291 (46%), Gaps = 55/291 (18%)
Query: 64 CAS----RIGFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMP-VKDLVA 118
CAS + G HG +K F V TALI+MY C A +F + ++L++
Sbjct: 241 CASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLIS 300
Query: 119 WNSMLDAYASNGEMEDAISLFHMMPLK----DLSSFNILISGYSSCGEVLAARSIFDKM- 173
WNS++ NG+ E A+ LF + + D +++N LISG+S G+V+ A F++M
Sbjct: 301 WNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERML 360
Query: 174 ---AIKDIVSWNSILSAC----------------------------TRAGDM-------- 194
+ + S+LSAC T DM
Sbjct: 361 SVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSS 420
Query: 195 --EKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLS 252
+ F F+ P K+ + WN M++G + G+ A+++F+ ++ P T T+VLS
Sbjct: 421 WARRIFDRFEPKP-KDPVFWNVMISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLS 479
Query: 253 ACAHLGSLETGIKIH--VYAIYSGLASSPHVTTALMDMYAKCGSIEQALQI 301
AC+H G++E G +I + Y S+ H+ ++D+ + G + +A ++
Sbjct: 480 ACSHCGNVEKGSQIFRLMQEEYGYKPSTEHI-GCMIDLLGRSGRLREAKEV 529
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 95/195 (48%), Gaps = 9/195 (4%)
Query: 149 SFNILISGYSSCGEVLAARSIFDKMAIK-----DIVSWNSILSACTRAGDMEKAFALFQE 203
+F L+ + G+V+ R I +K D+ + +++S + + A + E
Sbjct: 33 TFPPLLKSCAKLGDVVQGR-ILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKVLDE 91
Query: 204 MPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETG 263
MP + S N ++G L+ G +A +F + + + + +T SVL C G +E G
Sbjct: 92 MPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGC---GDIEGG 148
Query: 264 IKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALH 323
+++H A+ SG +V T+L+ MY++CG A ++F K K + +NA ISGL +
Sbjct: 149 MQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMEN 208
Query: 324 GHGYAALKLFGYMKK 338
G +F M+K
Sbjct: 209 GVMNLVPSVFNLMRK 223
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 104/260 (40%), Gaps = 69/260 (26%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKA---AGK------------ 62
WN +I M+ G E AV + + G + D+ T+ L+ GK
Sbjct: 301 WNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERML 360
Query: 63 --------NCASRI------------GFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTA 102
C + + G HG IK R IFV T+LI+MY ++
Sbjct: 361 SVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSS 420
Query: 103 DACKMFENMP--VKDLVAWNSMLDAYASNGEMEDAISLFHMMPLKDLSSFNILISGYSSC 160
A ++F+ KD V WN M+ Y +GE E AI +F
Sbjct: 421 WARRIFDRFEPKPKDPVFWNVMISGYGKHGECESAIEIF--------------------- 459
Query: 161 GEVLAARSIFDKMAIKDIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCL 220
E+L + +A ++ ++LSAC+ G++EK +F+ M + +T GC+
Sbjct: 460 -ELLREEKVEPSLA-----TFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTEHIGCM 513
Query: 221 -----QRGQFSEAVDLFDEM 235
+ G+ EA ++ D+M
Sbjct: 514 IDLLGRSGRLREAKEVIDQM 533
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 45/93 (48%)
Query: 242 PDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQI 301
P+ T +L +CA LG + G +H + +G TAL+ MY K + AL++
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKV 88
Query: 302 FFKAQVKDIYCWNAIISGLALHGHGYAALKLFG 334
+ + I NA +SGL +G A ++FG
Sbjct: 89 LDEMPERGIASVNAAVSGLLENGFCRDAFRMFG 121
>AT2G04860.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:1706787-1708535 REVERSE
Length = 582
Score = 130 bits (326), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/331 (28%), Positives = 157/331 (47%), Gaps = 17/331 (5%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTI 77
WN +I + G E+A+ + NM T LL A + H +
Sbjct: 110 WNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSAHVSH------EPLHCLVV 163
Query: 78 KTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAIS 137
K G I V T+L+ Y C A +++ + +V S++ YA G+M+ A+
Sbjct: 164 KCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVV 223
Query: 138 LFHM-----MPLKDLSSFNIL----ISGYSSCGEVLAARSIFDKMAIKDIVSWNSILSAC 188
F M + ++ IL S + G L +I + K +V N +++
Sbjct: 224 YFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVV-NGLITMY 282
Query: 189 TRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTN-CLPDYLTA 247
++ D+E LF+++ ISWN++++GC+Q G+ S A ++F +M T LPD +T
Sbjct: 283 SKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITI 342
Query: 248 TSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQV 307
S+L+ C+ L L G ++H Y + + + V TAL+DMYAKCG+ QA +F +
Sbjct: 343 ASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKA 402
Query: 308 KDIYCWNAIISGLALHGHGYAALKLFGYMKK 338
WN++ISG +L G + AL + M++
Sbjct: 403 PCTATWNSMISGYSLSGLQHRALSCYLEMRE 433
Score = 111 bits (277), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 147/331 (44%), Gaps = 6/331 (1%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
MP + WN +I + G A ++ M GF T LL G+ G
Sbjct: 1 MPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQG 60
Query: 70 FAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASN 129
+ HG K+G V+ ALI+ Y A +F M K V+WN+M+ AY+ +
Sbjct: 61 RSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQS 120
Query: 130 GEMEDAISLFHMMPLK--DLSSFNI--LISGYSSCGEVLAARSIFDKMAIKDIVSWNSIL 185
G E+AI++F M K ++S I L+S + S E L + M + DI S++
Sbjct: 121 GLQEEAITVFKNMFEKNVEISPVTIINLLSAHVS-HEPLHCLVVKCGM-VNDISVVTSLV 178
Query: 186 SACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYL 245
A +R G + A L+ + + ++++ ++G AV F + + D +
Sbjct: 179 CAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAV 238
Query: 246 TATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKA 305
+L C ++ G+ +H YAI SGL + V L+ MY+K +E L +F +
Sbjct: 239 ALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQL 298
Query: 306 QVKDIYCWNAIISGLALHGHGYAALKLFGYM 336
Q + WN++ISG G A ++F M
Sbjct: 299 QETPLISWNSVISGCVQSGRASTAFEVFHQM 329
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 101/252 (40%), Gaps = 36/252 (14%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHG-FRADNYTFPILLKAAGKNCASRIGFAFHGQT 76
WN +I + G A A + M + G D T LL + C +G HG T
Sbjct: 306 WNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYT 365
Query: 77 IKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAI 136
++ F FV TALI+MY A +F+++ WNSM+ Y+ +G A+
Sbjct: 366 LRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRAL 425
Query: 137 SLFHMMPLKDLSSFNILISGYSSCGEVLAARSIFDKMAIKDIVSWNSILSACTRAGDMEK 196
S + M K L D +++ +LSAC G +++
Sbjct: 426 SCYLEMREKGLK---------------------------PDEITFLGVLSACNHGGFVDE 458
Query: 197 A----FALFQEMPMKNTISWNTMLAGCLQRG-QFSEAVDLFDEMKTTNCLPDYLTATSVL 251
A+ +E + T+ ++ G L R F+EA+ L +M PD ++L
Sbjct: 459 GKICFRAMIKEFGISPTLQHYALMVGLLGRACLFTEALYLIWKMDIK---PDSAVWGALL 515
Query: 252 SACAHLGSLETG 263
SAC LE G
Sbjct: 516 SACIIHRELEVG 527
>AT4G21065.2 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT4G33170.1); Has 16184 Blast hits to 5257
proteins in 175 species: Archae - 0; Bacteria - 4;
Metazoa - 118; Fungi - 47; Plants - 15742; Viruses - 0;
Other Eukaryotes - 273 (source: NCBI BLink). |
chr4:11246375-11247763 FORWARD
Length = 462
Score = 130 bits (326), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 98/156 (62%)
Query: 182 NSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCL 241
NS+L GD+ A+ +F +MP K+ ++WN+++ G + G+ EA+ L+ EM +
Sbjct: 27 NSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIK 86
Query: 242 PDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQI 301
PD T S+LSACA +G+L G ++HVY I GL + H + L+D+YA+CG +E+A +
Sbjct: 87 PDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTL 146
Query: 302 FFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMK 337
F + K+ W ++I GLA++G G A++LF YM+
Sbjct: 147 FDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYME 182
Score = 127 bits (320), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 143/270 (52%), Gaps = 13/270 (4%)
Query: 67 RIGFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAY 126
R+G H I++GF I+VQ +L+++Y A A K+F+ MP KDLVAWNS+++ +
Sbjct: 5 RLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGF 64
Query: 127 ASNGEMEDAISLFHMMPLKDL--SSFNI--LISGYSSCGEVLAARSIFDKMA----IKDI 178
A NG+ E+A++L+ M K + F I L+S + G + + + M +++
Sbjct: 65 AENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNL 124
Query: 179 VSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTT 238
S N +L R G +E+A LF EM KN++SW +++ G G EA++LF M++T
Sbjct: 125 HSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMEST 184
Query: 239 N-CLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVT--TALMDMYAKCGSI 295
LP +T +L AC+H G ++ G + + + P + ++D+ A+ G +
Sbjct: 185 EGLLPCEITFVGILYACSHCGMVKEGFE-YFRRMREEYKIEPRIEHFGCMVDLLARAGQV 243
Query: 296 EQALQIFFKAQVK-DIYCWNAIISGLALHG 324
++A + ++ ++ W ++ +HG
Sbjct: 244 KKAYEYIKSMPMQPNVVIWRTLLGACTVHG 273
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 101/225 (44%), Gaps = 11/225 (4%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
MP ++ WN +I G E+A+ Y M G + D +T LL A K A +G
Sbjct: 49 MPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLG 108
Query: 70 FAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASN 129
H IK G R++ L+++Y +A +F+ M K+ V+W S++ A N
Sbjct: 109 KRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVN 168
Query: 130 GEMEDAISLF-HMMPLKDLSSFNILISGY----SSCGEVLAARSIFDKMAIK-----DIV 179
G ++AI LF +M + L I G S CG V F +M + I
Sbjct: 169 GFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIE 228
Query: 180 SWNSILSACTRAGDMEKAFALFQEMPMK-NTISWNTMLAGCLQRG 223
+ ++ RAG ++KA+ + MPM+ N + W T+L C G
Sbjct: 229 HFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHG 273
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 43/80 (53%)
Query: 257 LGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAI 316
+ + G IH I SG S +V +L+ +YA CG + A ++F K KD+ WN++
Sbjct: 1 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSV 60
Query: 317 ISGLALHGHGYAALKLFGYM 336
I+G A +G AL L+ M
Sbjct: 61 INGFAENGKPEEALALYTEM 80
>AT4G14850.1 | Symbols: LOI1 | LOI1 (lovastatin insensitive 1) |
chr4:8513947-8516275 FORWARD
Length = 684
Score = 129 bits (324), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 151/338 (44%), Gaps = 16/338 (4%)
Query: 11 PSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGF 70
P+ V W +I G+ A++ + M+ G +++TFP KA G
Sbjct: 69 PARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGK 128
Query: 71 AFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNG 130
H +K G +FV + +MY DA K+F+ +P ++L WN+ + ++G
Sbjct: 129 QIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDG 188
Query: 131 EMEDAISLFHMMPLKDLSSFNILISGY-SSCGE-----------VLAARSIFDKMAIKDI 178
+AI F D +I + ++C + L RS FD D+
Sbjct: 189 RPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDT----DV 244
Query: 179 VSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTT 238
N ++ + + + +F EM KN +SW +++A +Q + +A L+ +
Sbjct: 245 SVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKD 304
Query: 239 NCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQA 298
+SVLSACA + LE G IH +A+ + + + V +AL+DMY KCG IE +
Sbjct: 305 IVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDS 364
Query: 299 LQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYM 336
Q F + K++ N++I G A G AL LF M
Sbjct: 365 EQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEM 402
Score = 121 bits (303), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 156/329 (47%), Gaps = 16/329 (4%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
+P + WN I + G +A+ ++ + ++ TF L A +G
Sbjct: 169 IPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLG 228
Query: 70 FAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASN 129
HG +++GF + V LI+ YG + +F M K+ V+W S++ AY N
Sbjct: 229 MQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQN 288
Query: 130 GEMEDAISLFHMMPLKDL--SSFNILISGYSSCGEVLA---ARSI----FDKMAIKDIVS 180
E E A S+ ++ KD+ +S ++ S S+C + RSI + I
Sbjct: 289 HEDEKA-SVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFV 347
Query: 181 WNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNC 240
++++ + G +E + F EMP KN ++ N+++ G +GQ A+ LF+EM C
Sbjct: 348 GSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGC 407
Query: 241 --LPDYLTATSVLSACAHLGSLETGIKI--HVYAIYSGLASSPHVTTALMDMYAKCGSIE 296
P+Y+T S+LSAC+ G++E G+KI + + Y G+ + ++DM + G +E
Sbjct: 408 GPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTY-GIEPGAEHYSCIVDMLGRAGMVE 466
Query: 297 QALQIFFKAQVKD-IYCWNAIISGLALHG 324
+A + K ++ I W A+ + +HG
Sbjct: 467 RAYEFIKKMPIQPTISVWGALQNACRMHG 495
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 121/285 (42%), Gaps = 33/285 (11%)
Query: 55 ILLKAAGKNCASRIGFAFHGQTIKT-GFYRHIFVQTALINMYGTLHCTADACKMFENMPV 113
+LLK A + R+G H + +KT F+ LINMY L A + P
Sbjct: 11 LLLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPA 70
Query: 114 KDLVAWNSMLDAYASNGEMEDAISLFHMM--------------PLKDLSSFNILISGYS- 158
+++V+W S++ A NG A+ F M K ++S + ++G
Sbjct: 71 RNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQI 130
Query: 159 -----SCGEVLAARSIFDKMAIKDIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWN 213
CG +L D+ S + + A LF E+P +N +WN
Sbjct: 131 HALAVKCGRIL------------DVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWN 178
Query: 214 TMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYS 273
++ + G+ EA++ F E + + P+ +T + L+AC+ L G+++H + S
Sbjct: 179 AFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRS 238
Query: 274 GLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIIS 318
G + V L+D Y KC I + IF + K+ W ++++
Sbjct: 239 GFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVA 283
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 104/219 (47%), Gaps = 12/219 (5%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTI 77
W ++ ++ E+A + Y+ + ++ +L A +G + H +
Sbjct: 278 WCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAV 337
Query: 78 KTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAIS 137
K R IFV +AL++MYG C D+ + F+ MP K+LV NS++ YA G+++ A++
Sbjct: 338 KACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALA 397
Query: 138 LFHMM------PLKDLSSFNILISGYSSCGEVLAARSIFDKMAIKDIVS-----WNSILS 186
LF M P + +F L+S S G V IFD M + ++ I+
Sbjct: 398 LFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVD 457
Query: 187 ACTRAGDMEKAFALFQEMPMKNTIS-WNTMLAGCLQRGQ 224
RAG +E+A+ ++MP++ TIS W + C G+
Sbjct: 458 MLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGK 496
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 71/152 (46%)
Query: 182 NSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCL 241
N +++ ++ E A + + P +N +SW ++++G Q G FS A+ F EM+ +
Sbjct: 46 NYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVV 105
Query: 242 PDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQI 301
P+ T A A L TG +IH A+ G V + DMY K + A ++
Sbjct: 106 PNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKL 165
Query: 302 FFKAQVKDIYCWNAIISGLALHGHGYAALKLF 333
F + +++ WNA IS G A++ F
Sbjct: 166 FDEIPERNLETWNAFISNSVTDGRPREAIEAF 197
>AT2G46050.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:18939262-18941034 FORWARD
Length = 590
Score = 129 bits (323), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 145/298 (48%), Gaps = 14/298 (4%)
Query: 49 DNYTFPILLKAAGKNCASRIGFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMF 108
D+ +F L++ + + G H +K G F T+L++ YG +A ++F
Sbjct: 141 DHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVF 200
Query: 109 ENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMPLKDLSSFNILISGYSSCGEVLAA-- 166
E + +DLV WN+++ +Y NG +++A L +M S N Y + +L+A
Sbjct: 201 EAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMG----SDKNRFRGDYFTFSSLLSACR 256
Query: 167 -------RSIFDKMAIK-DIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAG 218
+I K++ + DI ++L+ ++ + A F+ M ++N +SWN M+ G
Sbjct: 257 IEQGKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVG 316
Query: 219 CLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASS 278
Q G+ EA+ LF +M N PD LT SVLS+CA ++ ++ G A
Sbjct: 317 FAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADF 376
Query: 279 PHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYM 336
V +L+ Y++ G++ +AL F + D+ W ++I LA HG +L++F M
Sbjct: 377 LSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFAEESLQMFESM 434
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 139/328 (42%), Gaps = 80/328 (24%)
Query: 18 WNEIIKKHMLVGNAEQA--VLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQ 75
WN ++ ++L G ++A +L + + FR D +TF LL A C G H
Sbjct: 211 WNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSA----CRIEQGKQIHAI 266
Query: 76 TIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDA 135
K + I V TAL+NMY + +DA + FE+M V+++V+WN+M+ +A NGE +A
Sbjct: 267 LFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREA 326
Query: 136 ISLFHMMPLKDL---------------------------------------SSFNILISG 156
+ LF M L++L S N LIS
Sbjct: 327 MRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISS 386
Query: 157 YSSCGEVLAARSIFDKMAIKDIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTML 216
YS G + A F + D+VSW S++ A G E++ +F+ M
Sbjct: 387 YSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFAEESLQMFESM------------ 434
Query: 217 AGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKI--HVYAIYSG 274
LQ+ Q PD +T VLSAC+H G ++ G++ + Y
Sbjct: 435 ---LQKLQ-----------------PDKITFLEVLSACSHGGLVQEGLRCFKRMTEFYKI 474
Query: 275 LASSPHVTTALMDMYAKCGSIEQALQIF 302
A H T L+D+ + G I++A +
Sbjct: 475 EAEDEHY-TCLIDLLGRAGFIDEASDVL 501
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 86/164 (52%), Gaps = 8/164 (4%)
Query: 182 NSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQR-GQFSEAVDL----FDEMK 236
N +L A T+ + + A LF EMP++N ++WN ++ G +QR G + L +
Sbjct: 75 NKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQRDGDTNHRAHLGFCYLSRIL 134
Query: 237 TTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIE 296
T+ D+++ ++ C +++ GI++H + GL SS +T+L+ Y KCG I
Sbjct: 135 FTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCGLIV 194
Query: 297 QALQIFFKAQVKDIYCWNAIISGLALHG---HGYAALKLFGYMK 337
+A ++F +D+ WNA++S L+G + LKL G K
Sbjct: 195 EARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDK 238
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 60/126 (47%), Gaps = 8/126 (6%)
Query: 120 NSMLDAYASNGEMEDAISLFHMMPLKDLSSFNILISGYSSCGEVLAARSIFDKMAIK--- 176
NS++ +Y+ NG + +A+ FH + DL S+ +I +S G + +F+ M K
Sbjct: 381 NSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFAEESLQMFESMLQKLQP 440
Query: 177 DIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCL-----QRGQFSEAVDL 231
D +++ +LSAC+ G +++ F+ M I CL + G EA D+
Sbjct: 441 DKITFLEVLSACSHGGLVQEGLRCFKRMTEFYKIEAEDEHYTCLIDLLGRAGFIDEASDV 500
Query: 232 FDEMKT 237
+ M T
Sbjct: 501 LNSMPT 506
>AT5G04780.1 | Symbols: | INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: MEF1
(MITOCHONDRIAL RNA EDITING FACTOR 1) (TAIR:AT5G52630.1);
Has 13798 Blast hits to 4918 proteins in 150 species:
Archae - 0; Bacteria - 4; Metazoa - 59; Fungi - 36;
Plants - 13447; Viruses - 0; Other Eukaryotes - 252
(source: NCBI BLink). | chr5:1384564-1386447 FORWARD
Length = 627
Score = 128 bits (322), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 149/292 (51%), Gaps = 10/292 (3%)
Query: 56 LLKAAGKNCASRIGFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKD 115
+L+ +N A A HG+ I+ + + LIN Y A ++F+ M +
Sbjct: 59 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 118
Query: 116 LVAWNSMLDAYASNGEMEDAISLFHMMPLKDLSSFNILISGY-SSCG---EVLAARSIFD 171
LV+WN+M+ Y N +A+ +F M + IS S+CG + L + +
Sbjct: 119 LVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKL-H 177
Query: 172 KMAIKDIVSWN-----SILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFS 226
+++K + N ++L + G ++ A +F+ M K++++W++M+AG +Q +
Sbjct: 178 CLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYE 237
Query: 227 EAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALM 286
EA+ L+ + + + T +SV+ AC++L +L G ++H SG S+ V ++ +
Sbjct: 238 EALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAV 297
Query: 287 DMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMKK 338
DMYAKCGS+ ++ IF + Q K++ WN IISG A H + LF M++
Sbjct: 298 DMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQ 349
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 139/294 (47%), Gaps = 11/294 (3%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTI 77
WN +I + +A+ ++ M+ GF+ +T +L A G NC + H ++
Sbjct: 122 WNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSV 181
Query: 78 KTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAIS 137
KT +++V TAL+++Y DA ++FE+M K V W+SM+ Y N E+A+
Sbjct: 182 KTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALL 241
Query: 138 LFHMMPLKDLSSFNILISGYSSCGEVLAARSIFDKMAI--------KDIVSWNSILSACT 189
L+ L +S LAA +M ++ +S +
Sbjct: 242 LYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYA 301
Query: 190 RAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATS 249
+ G + +++ +F E+ KN WNT+++G + + E + LF++M+ P+ +T +S
Sbjct: 302 KCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSS 361
Query: 250 VLSACAHLGSLETGIKIHVYAIYSGLASSPHVT--TALMDMYAKCGSIEQALQI 301
+LS C H G +E G + + + SP+V + ++D+ + G + +A ++
Sbjct: 362 LLSVCGHTGLVEEGRRF-FKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYEL 414
>AT3G46790.1 | Symbols: CRR2 | CRR2 (CHLORORESPIRATORY REDUCTION 2)
| chr3:17231975-17233948 REVERSE
Length = 657
Score = 128 bits (322), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 142/299 (47%), Gaps = 14/299 (4%)
Query: 52 TFPILLKAAGKNCASRIGFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENM 111
T+ +L+ G + H + G + F+ T LI MY L A K+F+
Sbjct: 79 TYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKT 138
Query: 112 PVKDLVAWNSMLDAYASNGEMEDAISLFHMMPLKDLSS--------FNILISGYSSCGEV 163
+ + WN++ A G E+ + L+ M + S ++ + +
Sbjct: 139 RKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHL 198
Query: 164 LAARSIFDKMAIKDIVSWNSILSACT----RAGDMEKAFALFQEMPMKNTISWNTMLAGC 219
+ + I + + S I++ R G ++ A +F MP++N +SW+ M+A
Sbjct: 199 MKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACY 258
Query: 220 LQRGQFSEAVDLFDEM--KTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLAS 277
+ G+ EA+ F EM +T + P+ +T SVL ACA L +LE G IH Y + GL S
Sbjct: 259 AKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDS 318
Query: 278 SPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYM 336
V +AL+ MY +CG +E ++F + +D+ WN++IS +HG+G A+++F M
Sbjct: 319 ILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEM 377
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 154/325 (47%), Gaps = 18/325 (5%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKA-AGKNCASR---IGFAFH 73
WN + + L G+ E+ + Y M G +D +T+ +LKA C G H
Sbjct: 146 WNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIH 205
Query: 74 GQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEME 133
+ G+ H+++ T L++MY C A +F MPV+++V+W++M+ YA NG+
Sbjct: 206 AHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAF 265
Query: 134 DAISLFH--MMPLKDLSSFNI-LISGYSSCGEVLA---ARSIFDKMAIKDIVSWNSILSA 187
+A+ F M KD S ++ ++S +C + A + I + + + S ++SA
Sbjct: 266 EALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISA 325
Query: 188 CT----RAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPD 243
R G +E +F M ++ +SWN++++ G +A+ +F+EM P
Sbjct: 326 LVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPT 385
Query: 244 YLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVT--TALMDMYAKCGSIEQALQI 301
+T SVL AC+H G +E G ++ ++ P + ++D+ + +++A ++
Sbjct: 386 PVTFVSVLGACSHEGLVEEGKRL-FETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKM 444
Query: 302 FFKAQVKD-IYCWNAIISGLALHGH 325
+ + W +++ +HG+
Sbjct: 445 VQDMRTEPGPKVWGSLLGSCRIHGN 469
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 102/230 (44%), Gaps = 8/230 (3%)
Query: 117 VAWNSMLDAYASNGEMEDAISLFHMMPLKDLSSFNILI---SGYSSCGEVLAA-RSIFDK 172
++ N ++ + G+++ AI + ++ +LI SS + L R I D
Sbjct: 47 ISNNQLIQSLCKEGKLKQAIRVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRHILDN 106
Query: 173 MAIKDIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLF 232
+ +D ++ + G ++ A +F + + WN + G E + L+
Sbjct: 107 GSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLY 166
Query: 233 DEMKTTNCLPDYLTATSVLSACA----HLGSLETGIKIHVYAIYSGLASSPHVTTALMDM 288
+M D T T VL AC + L G +IH + G +S ++ T L+DM
Sbjct: 167 WKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDM 226
Query: 289 YAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMKK 338
YA+ G ++ A +F V+++ W+A+I+ A +G + AL+ F M +
Sbjct: 227 YARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMR 276
>AT1G71460.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:26928247-26930316 REVERSE
Length = 689
Score = 127 bits (320), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 160/337 (47%), Gaps = 12/337 (3%)
Query: 12 SLEVRRWNEIIKKHMLVGNAE-QAVL-TYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
S V WN +++ ++ G Q VL T+ M+ G + Y+ + K+ A R G
Sbjct: 174 SSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQG 233
Query: 70 FAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASN 129
H IK G + +F++T+L++MY A ++F+ + +D+V W +M+ A N
Sbjct: 234 LKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHN 293
Query: 130 GEMEDAISLFHMMPLKDLSSFN--ILISGYSSCGEVLA--------ARSIFDKMAIKDIV 179
+A+ LF M ++ N IL + G+V A A + K ++
Sbjct: 294 KRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPF 353
Query: 180 SWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTN 239
+ ++ + GDM +F +N ISW +++G G+F +A+ M+
Sbjct: 354 VHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEG 413
Query: 240 CLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQAL 299
PD +T +VL CA L +++ G +IH YA+ + + + T+LM MY+KCG E +
Sbjct: 414 FRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPI 473
Query: 300 QIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYM 336
++F + + +++ W A+I + A +++F M
Sbjct: 474 RLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLM 510
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 149/321 (46%), Gaps = 12/321 (3%)
Query: 30 NAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTIKTGFYRHIFVQT 89
N E A+ ++ G + TF LL+A + + G H G + F++T
Sbjct: 91 NLEVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRT 150
Query: 90 ALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEM--EDAISLFHMMP---- 143
L++MY DA K+F+ ++ +WN++L +G+ +D +S F M
Sbjct: 151 KLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGV 210
Query: 144 ---LKDLSSFNILISGYSSCGEVLAARSIFDKMAI-KDIVSWNSILSACTRAGDMEKAFA 199
+ LS+ +G S+ + L ++ K + + S++ + G + A
Sbjct: 211 DLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARR 270
Query: 200 LFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCL-PDYLTATSVLSACAHLG 258
+F E+ ++ + W M+AG + EA+ LF M + + P+ + T++L +
Sbjct: 271 VFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVK 330
Query: 259 SLETGIKIHVYAIYS-GLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAII 317
+L+ G ++H + + S P V + L+D+Y KCG + ++F+ ++ ++ W A++
Sbjct: 331 ALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALM 390
Query: 318 SGLALHGHGYAALKLFGYMKK 338
SG A +G AL+ +M++
Sbjct: 391 SGYAANGRFDQALRSIVWMQQ 411
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/334 (22%), Positives = 141/334 (42%), Gaps = 21/334 (6%)
Query: 7 NCFMPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHG---FR---ADNYTFP------ 54
C L R ++EI+++ ++V A A L + Q FR ++ +P
Sbjct: 261 KCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILT 320
Query: 55 ILLKAAGKNCASRIGFAFHGQTIKTGFY-RHIFVQTALINMYGTLHCTADACKMFENMPV 113
+L G A ++G H +K+ Y FV + LI++Y A ++F
Sbjct: 321 TILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQ 380
Query: 114 KDLVAWNSMLDAYASNGEMEDAISLFHMMPLKDLSSFNILISGY-SSCGEVLAARS---- 168
++ ++W +++ YA+NG + A+ M + + I+ C E+ A +
Sbjct: 381 RNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEI 440
Query: 169 ---IFDKMAIKDIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQF 225
+ + ++ S++ ++ G E LF + +N +W M+ ++
Sbjct: 441 HCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDL 500
Query: 226 SEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTAL 285
+++F M + PD +T VL+ C+ L +L+ G ++H + + S P V+ +
Sbjct: 501 RAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVSARI 560
Query: 286 MDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISG 319
+ MY KCG + A F VK W AII
Sbjct: 561 IKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEA 594
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 138/296 (46%), Gaps = 15/296 (5%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTI 77
W ++ + G +QA+ + V MQ GFR D T +L + A + G H +
Sbjct: 386 WTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYAL 445
Query: 78 KTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAIS 137
K F ++ + T+L+ MY ++F+ + +++ AW +M+D Y N ++ I
Sbjct: 446 KNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIE 505
Query: 138 LFHMMPLK----DLSSFNILISGYSSCGEVLAARSIFDKMAIKDIVSWN----SILSACT 189
+F +M L D + +++ S + + + + K+ S I+
Sbjct: 506 VFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVSARIIKMYG 565
Query: 190 RAGDMEKAFALFQEMPMKNTISWNTMLA--GCLQRGQFSEAVDLFDEMKTTNCLPDYLTA 247
+ GD+ A F + +K +++W ++ GC + F +A++ F++M + P+ T
Sbjct: 566 KCGDLRSANFSFDAVAVKGSLTWTAIIEAYGCNE--LFRDAINCFEQMVSRGFTPNTFTF 623
Query: 248 TSVLSACAHLGSLETGIKIH--VYAIYSGLASSPHVTTALMDMYAKCGSIEQALQI 301
T+VLS C+ G ++ + + +Y+ S H + ++++ +CG +E+A ++
Sbjct: 624 TAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEEHYSL-VIELLNRCGRVEEAQRL 678
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 78/190 (41%), Gaps = 27/190 (14%)
Query: 15 VRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHG 74
V+ W +I ++ + + + M + R D+ T +L A ++G HG
Sbjct: 484 VKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHG 543
Query: 75 QTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMED 134
+K F FV +I MYG A F+ + VK + W ++++AY N D
Sbjct: 544 HILKKEFESIPFVSARIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGCNELFRD 603
Query: 135 AISLFHMMPLKDLSSFNILISGYSSCGEVLAARSIFDKMAIKDIVSWNSILSACTRAGDM 194
AI+ F M + G++ + ++ ++LS C++AG +
Sbjct: 604 AINCFEQM----------VSRGFTP-----------------NTFTFTAVLSICSQAGFV 636
Query: 195 EKAFALFQEM 204
++A+ F M
Sbjct: 637 DEAYRFFNLM 646
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | EMB175 (EMBRYO
DEFECTIVE 175); catalytic | chr5:1010894-1013584 REVERSE
Length = 896
Score = 127 bits (320), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 95/372 (25%), Positives = 165/372 (44%), Gaps = 43/372 (11%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNM-QVHGFRADNYTFPILLKAAGKNCASRI 68
+P +V WN ++ + G + +A + M +V GF D++T LL + +
Sbjct: 244 IPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLR 303
Query: 69 GFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYAS 128
G HG+ I+ G + + V ALI Y ++E M +D V + M+ AY S
Sbjct: 304 GRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMS 363
Query: 129 NGEMEDAISLFHMMPLKDLSSFNILISGYSSCGEVLAARSIFDKM--------------- 173
G ++ A+ +F + K+ ++N L++G+ G L A +F M
Sbjct: 364 FGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSA 423
Query: 174 -------------------AIKDIVSWN-----SILSACTRAGDMEKAFALFQEMP--MK 207
IK ++N ++L CTR M A +F + P +
Sbjct: 424 VDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWPSNLD 483
Query: 208 NTISWNTMLAGCLQRGQFSEAVDLFDE-MKTTNCLPDYLTATSVLSACAHLGSLETGIKI 266
++ + +++ G + G +AV LF + D ++ T +L+ C LG E G +I
Sbjct: 484 SSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQI 543
Query: 267 HVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHG 326
H YA+ +G S + +L+ MYAKC + A++IF + D+ WN++IS L +G
Sbjct: 544 HCYALKAGYFSDISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYILQRNG 603
Query: 327 YAALKLFGYMKK 338
AL L+ M +
Sbjct: 604 DEALALWSRMNE 615
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/346 (23%), Positives = 158/346 (45%), Gaps = 45/346 (13%)
Query: 33 QAVLTYVNMQVHGF-RADNYTFPILLKAAGKNCASRIGFAFHGQTIKTGFYRHIFVQTAL 91
+A+ + M+ G + + YTF +L A + +G HG +K+GF +FV +L
Sbjct: 163 EALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSL 222
Query: 92 INMYGTLHCTA--DACKMFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMP------ 143
+++Y ++ D K+F+ +P +D+ +WN+++ + G+ A LF+ M
Sbjct: 223 MSLYDKDSGSSCDDVLKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFG 282
Query: 144 ----------------------------------LKDLSSFNILISGYSSCGEVLAARSI 169
+++LS N LI YS ++ S+
Sbjct: 283 VDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESL 342
Query: 170 FDKMAIKDIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAV 229
++ M +D V++ +++A G ++ A +F + KNTI++N ++AG + G +A+
Sbjct: 343 YEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKAL 402
Query: 230 DLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMY 289
LF +M + TS + AC + + +IH + I G A +P + TAL+DM
Sbjct: 403 KLFTDMLQRGVELTDFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMC 462
Query: 290 AKCGSIEQALQIF--FKAQVKDIYCWNAIISGLALHGHGYAALKLF 333
+C + A ++F + + + +II G A +G A+ LF
Sbjct: 463 TRCERMADAEEMFDQWPSNLDSSKATTSIIGGYARNGLPDKAVSLF 508
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 138/312 (44%), Gaps = 58/312 (18%)
Query: 66 SRIGFAFHGQTIKTGFYRH---IFVQ---------TALINMYGTLHCTADACKMFENMPV 113
+R+G A +K GF R +FV TALI+ + L+ +A K+F M
Sbjct: 114 TRLGNALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRK 173
Query: 114 KDLVAWN-----SMLDAYASNGEMEDAISLFHMMP----LKDLSSFNILISGY-----SS 159
LV N ++L A I + ++ L + N L+S Y SS
Sbjct: 174 AGLVQPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSS 233
Query: 160 CGEVLAARSIFDKMAIKDIVSWNSILSACTRAGDMEKAFALFQEMPM-----KNTISWNT 214
C +VL +FD++ +D+ SWN+++S+ + G KAF LF EM ++ + +T
Sbjct: 234 CDDVL---KLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLST 290
Query: 215 MLAGC-----LQRGQ----FSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIK 265
+L+ C L RG+ + + L E+ N L + + +
Sbjct: 291 LLSSCTDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKK------------ 338
Query: 266 IHVYAIYSGLASSPHVT-TALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHG 324
V ++Y + + VT T ++ Y G ++ A++IF K+ +NA+++G +G
Sbjct: 339 --VESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNG 396
Query: 325 HGYAALKLFGYM 336
HG ALKLF M
Sbjct: 397 HGLKALKLFTDM 408
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 145/324 (44%), Gaps = 25/324 (7%)
Query: 29 GNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTIKTGFYRHIFVQ 88
G+ +A+ + +M G +++ + A G ++ HG IK G + +Q
Sbjct: 396 GHGLKALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQ 455
Query: 89 TALINMYGTLHCTADACKMFENMP--VKDLVAWNSMLDAYASNGEMEDAISLFHMMPLK- 145
TAL++M ADA +MF+ P + A S++ YA NG + A+SLFH +
Sbjct: 456 TALLDMCTRCERMADAEEMFDQWPSNLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQ 515
Query: 146 ----DLSSFNILISGYSSCGEVLAARSIFDKM---AIK-----DIVSWNSILSACTRAGD 193
D S ++++ CG L R + ++ A+K DI NS++S + D
Sbjct: 516 KLFLDEVSLTLILA---VCG-TLGFREMGYQIHCYALKAGYFSDISLGNSLISMYAKCCD 571
Query: 194 MEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSA 253
+ A +F M + ISWN++++ + + EA+ L+ M PD +T T V+SA
Sbjct: 572 SDDAIKIFNTMREHDVISWNSLISCYILQRNGDEALALWSRMNEKEIKPDIITLTLVISA 631
Query: 254 CAHLGSLE----TGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVK- 308
+ S + + + + IY ++ H TA + + G +E+A V+
Sbjct: 632 FRYTESNKLSSCRDLFLSMKTIYDIEPTTEHY-TAFVRVLGHWGLLEEAEDTINSMPVQP 690
Query: 309 DIYCWNAIISGLALHGHGYAALKL 332
++ A++ +H + A ++
Sbjct: 691 EVSVLRALLDSCRIHSNTSVAKRV 714
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 79/160 (49%), Gaps = 3/160 (1%)
Query: 182 NSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCL 241
N+++S + G +A +F + +S+ +++G + EA+ +F M+ +
Sbjct: 118 NALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLV 177
Query: 242 -PDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAK--CGSIEQA 298
P+ T ++L+AC + GI+IH + SG +S V+ +LM +Y K S +
Sbjct: 178 QPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDV 237
Query: 299 LQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMKK 338
L++F + +D+ WN ++S L G + A LF M +
Sbjct: 238 LKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNR 277
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD
Length = 761
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 97/336 (28%), Positives = 154/336 (45%), Gaps = 37/336 (11%)
Query: 8 CFMPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQ--VHGFRADNYTFPILLKAAGKNCA 65
C MP + W +I +A++ ++ M+ V + T L A G
Sbjct: 255 CEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGV 314
Query: 66 S--RIGFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSML 123
R+G H Q I G+ ++ G L S++
Sbjct: 315 EFRRLGEQLHAQVISNGW--------ETVDHDGRLA--------------------KSLV 346
Query: 124 DAYASNGEMEDAISLFHMMPLKDLSSFNILISGYSSCGEVLAARSIFDKM-AIKDIVSWN 182
YAS+G + A SL + DL S NI+I+ Y G++ A ++F+++ ++ D VSW
Sbjct: 347 HMYASSGLIASAQSLLN--ESFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWT 404
Query: 183 SILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLP 242
S++ AGD+ +AF LFQ++ K+ ++W M++G +Q F+EA L +M P
Sbjct: 405 SMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKP 464
Query: 243 DYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPH--VTTALMDMYAKCGSIEQALQ 300
T + +LS+ +L+ G IH + P + +L+ MYAKCG+IE A +
Sbjct: 465 LNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYE 524
Query: 301 IFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYM 336
IF K KD WN++I GL+ HG AL LF M
Sbjct: 525 IFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEM 560
Score = 124 bits (311), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 78/244 (31%), Positives = 129/244 (52%), Gaps = 9/244 (3%)
Query: 101 TADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMPLKDLSSFNILISGYSSC 160
+ DA ++F+ MP +++V+WN+++ NG+ME A +F MP +D+ S+N +I GY
Sbjct: 154 SEDAVELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIEN 213
Query: 161 GEVLAARSIFDKMAIKDIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCL 220
+ A+ +F M+ K++V+W S++ R GD+ +A+ LF EMP +N +SW M++G
Sbjct: 214 DGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFA 273
Query: 221 QRGQFSEAVDLFDEMK--TTNCLPDYLTATSVLSACAHLGS--LETGIKIHVYAIYSGLA 276
+ EA+ LF EMK P+ T S+ AC LG G ++H I +G
Sbjct: 274 WNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWE 333
Query: 277 SSPH---VTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLF 333
+ H + +L+ MYA G I A + ++ D+ N II+ +G A LF
Sbjct: 334 TVDHDGRLAKSLVHMYASSGLIASAQSLLNESF--DLQSCNIIINRYLKNGDLERAETLF 391
Query: 334 GYMK 337
+K
Sbjct: 392 ERVK 395
Score = 119 bits (297), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 141/274 (51%), Gaps = 17/274 (6%)
Query: 72 FHGQTIKT-GFYRHIFV-QTALI----NMYGTLHCTADACKMFENMPVKDLVAWNSMLDA 125
++G I G YR F + ALI + G +H K+ + + +V W S+L
Sbjct: 27 YYGDKIPNYGSYRRGFSNEEALILRRLSEGGLVHARHLLDKIPQRGSINRVVYWTSLLSK 86
Query: 126 YASNGEMEDAISLFHMMPLKDLSSFNILISGYSSCGEVLAARSIFDKMAIKDIVSWNSIL 185
YA G +++A LF +MP +++ + N +++GY C + A ++F +M K++VSW +L
Sbjct: 87 YAKTGYLDEARVLFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLFREMP-KNVVSWTVML 145
Query: 186 SACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYL 245
+A G E A LF EMP +N +SWNT++ G ++ G +A +FD M + D +
Sbjct: 146 TALCDDGRSEDAVELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSR----DVV 201
Query: 246 TATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVT-TALMDMYAKCGSIEQALQIFFK 304
+ +++ G +E ++ ++ VT T+++ Y + G + +A ++F +
Sbjct: 202 SWNAMIK-----GYIENDGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCE 256
Query: 305 AQVKDIYCWNAIISGLALHGHGYAALKLFGYMKK 338
++I W A+ISG A + AL LF MKK
Sbjct: 257 MPERNIVSWTAMISGFAWNELYREALMLFLEMKK 290
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 91/218 (41%), Gaps = 37/218 (16%)
Query: 45 GFRADNYTFPILLKAAGKNCASRIGFAFHGQTIKTG--FYRHIFVQTALINMYGTLHCTA 102
G + N T+ +LL +AG G H KT + + +Q +L++MY
Sbjct: 461 GLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIE 520
Query: 103 DACKMFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMPLKDLSSFNILISGYSSCGE 162
DA ++F M KD V+WNSM+ + +G + A++LF
Sbjct: 521 DAYEIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLF----------------------- 557
Query: 163 VLAARSIFDKMAIKDIVSWNSILSACTRAGDMEKAFALFQEMPMKNTIS-----WNTMLA 217
+ + D + V++ +LSAC+ +G + + LF+ M +I + +M+
Sbjct: 558 ----KEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPGIDHYISMID 613
Query: 218 GCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACA 255
+ G+ EA + + T PD+ ++L C
Sbjct: 614 LLGRAGKLKEAEEFISALPFT---PDHTVYGALLGLCG 648
>AT2G17210.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:7485398-7487602 REVERSE
Length = 715
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 100/342 (29%), Positives = 171/342 (50%), Gaps = 18/342 (5%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAV-LTYVNMQVHGFRA--DNYTFPILLKAAGKNCAS 66
M +V W+ +I+ + V + E V L VH + D T +LKA
Sbjct: 185 MSERDVISWSVVIRSY--VQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDI 242
Query: 67 RIGFAFHGQTIKTGF-YRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDA 125
+G + HG +I+ GF +FV +LI+MY A ++F+ +++V+WNS+L
Sbjct: 243 DVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAG 302
Query: 126 YASNGEMEDAISLFHMMPLKDLSSFNI-LISGYSSCG---EVLAARSIFDKMAIK----D 177
+ N ++A+ +FH+M + + + ++S C + L +SI + + +
Sbjct: 303 FVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESN 362
Query: 178 IVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKT 237
V+ +S++ A T ++ A + M K+ +S +TM++G G+ EA+ +F M+
Sbjct: 363 EVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRD 422
Query: 238 TNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLA-SSPHVTTALMDMYAKCGSIE 296
T P+ +T S+L+AC+ L T H AI LA + V T+++D YAKCG+IE
Sbjct: 423 T---PNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIE 479
Query: 297 QALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMKK 338
A + F + K+I W IIS A++G AL LF MK+
Sbjct: 480 MARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEMKQ 521
Score = 114 bits (285), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 154/340 (45%), Gaps = 17/340 (5%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRI- 68
M S + WN I+ + G E+ + + ++V GF + T +++ A C S
Sbjct: 87 MNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFEPNTSTLVLVIHA----CRSLWF 142
Query: 69 -GFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYA 127
G HG I++GF VQ +++ MY + A K+F+ M +D+++W+ ++ +Y
Sbjct: 143 DGEKIHGYVIRSGFCGISSVQNSILCMYADSD-SLSARKLFDEMSERDVISWSVVIRSYV 201
Query: 128 SNGEMEDAISLFHMM--PLKDLSSFNILISGYSSC--------GEVLAARSIFDKMAIKD 177
+ E + LF M K + S +C G + SI + D
Sbjct: 202 QSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLAD 261
Query: 178 IVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKT 237
+ NS++ ++ D++ AF +F E +N +SWN++LAG + ++ EA+++F M
Sbjct: 262 VFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQ 321
Query: 238 TNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQ 297
D +T S+L C IH I G S+ ++L+D Y C ++
Sbjct: 322 EAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDD 381
Query: 298 ALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMK 337
A + KD+ + +ISGLA G A+ +F +M+
Sbjct: 382 AGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMR 421
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 146/312 (46%), Gaps = 11/312 (3%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTI 77
WN I+ + ++A+ + M D T LL+ + HG I
Sbjct: 296 WNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVII 355
Query: 78 KTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAIS 137
+ G+ + ++LI+ Y + DA + ++M KD+V+ ++M+ A G ++AIS
Sbjct: 356 RRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAIS 415
Query: 138 LF-HMMPLKDLSSFNILISGYSSCGEVLAAR-----SIFDKMAIKDIVSWNSILSACTRA 191
+F HM + + L++ S ++ ++ +I +AI DI SI+ A +
Sbjct: 416 IFCHMRDTPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKC 475
Query: 192 GDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVL 251
G +E A F ++ KN ISW +++ G +A+ LFDEMK P+ +T + L
Sbjct: 476 GAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEMKQKGYTPNAVTYLAAL 535
Query: 252 SACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIY 311
SAC H G ++ G+ I + S + ++DM ++ G I+ A+++ K +D+
Sbjct: 536 SACNHGGLVKKGLMIFKSMVEEDHKPSLQHYSCIVDMLSRAGEIDTAVEL-IKNLPEDVK 594
Query: 312 ----CWNAIISG 319
W AI+SG
Sbjct: 595 AGASAWGAILSG 606
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 85/195 (43%), Gaps = 17/195 (8%)
Query: 153 LISGYSSCGEVLAARSIFDKMAIKDIV-------SW----NSILSACTRAGDMEKAFALF 201
++SGYS E+ A F+ + IV SW NSI + GD+ F
Sbjct: 28 VVSGYS---EIQRAGVQFNDPFVFPIVFKACAKLSWLFQGNSIADFYMKCGDLCSGLREF 84
Query: 202 QEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLE 261
M ++++SWN ++ G L G E + F +++ P+ T V+ AC L
Sbjct: 85 DCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFEPNTSTLVLVIHACRSL--WF 142
Query: 262 TGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLA 321
G KIH Y I SG V +++ MYA S+ A ++F + +D+ W+ +I
Sbjct: 143 DGEKIHGYVIRSGFCGISSVQNSILCMYADSDSL-SARKLFDEMSERDVISWSVVIRSYV 201
Query: 322 LHGHGYAALKLFGYM 336
LKLF M
Sbjct: 202 QSKEPVVGLKLFKEM 216
>AT2G33760.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:14275800-14277551 FORWARD
Length = 583
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 145/278 (52%), Gaps = 18/278 (6%)
Query: 73 HGQTIKTGFYRHIFVQTALINMYGTLHCTADACK----MFENMPVKDLVAWNSMLDAYAS 128
H I TG+ R + T LI TL C+A A +F ++P+ D +NS++ + +
Sbjct: 29 HAHLIVTGYGRSRSLLTKLI----TLACSARAIAYTHLLFLSVPLPDDFLFNSVIKSTSK 84
Query: 129 NGEMEDAISLFHMMPLKDLSSFN-ILISGYSSCGEVLAAR--------SIFDKMAIKDIV 179
++ + M ++S N S SC ++ A R ++ + D
Sbjct: 85 LRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGL-DTY 143
Query: 180 SWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTN 239
++++ ++ GDME A +F MP K+ ++WN++++G Q G EA+ +F +M+ +
Sbjct: 144 VQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESG 203
Query: 240 CLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQAL 299
PD T S+LSACA G++ G +H Y I GL + + TAL+++Y++CG + +A
Sbjct: 204 FEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAR 263
Query: 300 QIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMK 337
++F K + ++ W A+IS HG+G A++LF M+
Sbjct: 264 EVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKME 301
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 155/326 (47%), Gaps = 26/326 (7%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTI 77
+N +IK + V Y M NYTF ++K+ A RIG H +
Sbjct: 75 FNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAV 134
Query: 78 KTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAIS 137
+GF +VQ AL+ Y A ++F+ MP K +VAWNS++ + NG ++AI
Sbjct: 135 VSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQ 194
Query: 138 LFHMMPLK----DLSSFNILISGYSSCGEVLAARSIFDKMAIKDIVSWN-----SILSAC 188
+F+ M D ++F L+S + G V + S + I + + N ++++
Sbjct: 195 VFYQMRESGFEPDSATFVSLLSACAQTGAV-SLGSWVHQYIISEGLDLNVKLGTALINLY 253
Query: 189 TRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNC--LPDYLT 246
+R GD+ KA +F +M N +W M++ G +AV+LF++M+ +C +P+ +T
Sbjct: 254 SRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKME-DDCGPIPNNVT 312
Query: 247 ATSVLSACAHLGSLETGIKIH-----VYAIYSGLASSPHVTTALMDMYAKCGSIEQALQI 301
+VLSACAH G +E G ++ Y + G+ HV ++DM + G +++A +
Sbjct: 313 FVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEH--HV--CMVDMLGRAGFLDEAYKF 368
Query: 302 FFK----AQVKDIYCWNAIISGLALH 323
+ + W A++ +H
Sbjct: 369 IHQLDATGKATAPALWTAMLGACKMH 394
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 107/236 (45%), Gaps = 14/236 (5%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
MP + WN ++ G A++A+ + M+ GF D+ TF LL A + A +G
Sbjct: 168 MPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLG 227
Query: 70 FAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASN 129
H I G ++ + TALIN+Y A ++F+ M ++ AW +M+ AY ++
Sbjct: 228 SWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTH 287
Query: 130 GEMEDAISLFHMM-----PLKDLSSFNILISGYSSCGEVLAARSIFDKMA-----IKDIV 179
G + A+ LF+ M P+ + +F ++S + G V RS++ +M I +
Sbjct: 288 GYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVE 347
Query: 180 SWNSILSACTRAGDMEKAFALFQEMPMKNTIS----WNTMLAGCLQRGQFSEAVDL 231
++ RAG +++A+ ++ + W ML C + V++
Sbjct: 348 HHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEI 403
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 74/139 (53%)
Query: 200 LFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGS 259
LF +P+ + +N+++ + V + M ++N P T TSV+ +CA L +
Sbjct: 63 LFLSVPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSA 122
Query: 260 LETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISG 319
L G +H +A+ SG +V AL+ Y+KCG +E A Q+F + K I WN+++SG
Sbjct: 123 LRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSG 182
Query: 320 LALHGHGYAALKLFGYMKK 338
+G A+++F M++
Sbjct: 183 FEQNGLADEAIQVFYQMRE 201
>AT5G19020.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:6352771-6357083 REVERSE
Length = 939
Score = 125 bits (314), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 106/406 (26%), Positives = 170/406 (41%), Gaps = 82/406 (20%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
MP + +IK + +A+ + M+ G + T ++ A C+ G
Sbjct: 387 MPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATVISA----CSHLGG 442
Query: 70 F----AFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPV------------ 113
IK +FV T L++MY C DA K+F+ MP
Sbjct: 443 IWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNLVTWNVMLNG 502
Query: 114 -------------------KDLVAWNSMLDAYASNGEMEDAI-------------SLFHM 141
KD+V+W +M+D ++++A+ S M
Sbjct: 503 YSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMM 562
Query: 142 MPLKDLSSFNI--------------------------LISGYSSCGEVLAARSIFDKMAI 175
+ L S+ ++ +I Y+ ++ A F+
Sbjct: 563 VDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVK 622
Query: 176 KDIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEM 235
I S N++++ + G +E+A +F + K+ SWN M++G Q A+ LF EM
Sbjct: 623 DHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREM 682
Query: 236 -KTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGS 294
++ PD +T SV SA + LGSLE G + H Y +S + + ++T A++DMYAKCGS
Sbjct: 683 ISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGS 742
Query: 295 IEQALQIFFKAQ---VKDIYCWNAIISGLALHGHGYAALKLFGYMK 337
IE AL IF + + I WNAII G A HGH AL L+ ++
Sbjct: 743 IETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQ 788
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/359 (23%), Positives = 155/359 (43%), Gaps = 49/359 (13%)
Query: 14 EVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFH 73
++ W +I + ++A++ Y M G + LL A+ ++ S G H
Sbjct: 523 DIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLH 582
Query: 74 GQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVA-WNSMLDAYASNGEM 132
G +K GF + F+Q +I+ Y + A + FE VKD +A N+++ + NG +
Sbjct: 583 GTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFE-ASVKDHIASRNALIAGFVKNGMV 641
Query: 133 EDAISLFHMMPLKDLSSFNILISGYSSCGEVLAARSIFDKM-----AIKDIVSWNSILSA 187
E A +F KD+ S+N +ISGY+ A +F +M D ++ S+ SA
Sbjct: 642 EQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSA 701
Query: 188 CTRAGDMEKA-----FALFQEMPMKNTIS------------------------------- 211
+ G +E+ + F +P + ++
Sbjct: 702 ISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTI 761
Query: 212 --WNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVY 269
WN ++ G G A+DL+ ++++ P+ +T VLSAC H G +E G K +
Sbjct: 762 SPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELG-KTYFE 820
Query: 270 AIYSGLASSPHVT--TALMDMYAKCGSIEQALQIFFKAQVK-DIYCWNAIISGLALHGH 325
++ S P + ++D+ K G +E+A ++ K VK D+ W ++S HG+
Sbjct: 821 SMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMPVKADVMIWGMLLSASRTHGN 879
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 135/292 (46%), Gaps = 48/292 (16%)
Query: 51 YTFPILLKAAGK--NCASRIGFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADA---- 104
Y P+++ + + SR F F G++ T + AL++ G+ + D
Sbjct: 264 YLLPLIILRPARCFSAPSRTHFDFSGESSDT--------ERALVSALGSCASSNDVTCGR 315
Query: 105 ---CKMFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMPLKDLSSFNILISGYSSCG 161
C++ ++ + NS+L+ YA + DA S+F D +SFNI++ GY
Sbjct: 316 QIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAKLDSASFNIMVDGY---- 371
Query: 162 EVLAARSIFDKMAIKDIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQ 221
+ +R ++D A LF MP ++ +S+ T++ G Q
Sbjct: 372 --VRSRRLWD-------------------------ALKLFDVMPERSCVSYTTLIKGYAQ 404
Query: 222 RGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHV 281
Q+SEA++LF EM+ + + +T +V+SAC+HLG + + AI L V
Sbjct: 405 NNQWSEAMELFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFV 464
Query: 282 TTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLF 333
+T L+ MY C ++ A ++F + +++ WN +++G + G A +LF
Sbjct: 465 STNLLHMYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELF 516
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 45/90 (50%)
Query: 249 SVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVK 308
S L +CA + G +IH + SGL S+ ++ ++++MYAKC + A +F
Sbjct: 300 SALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAKL 359
Query: 309 DIYCWNAIISGLALHGHGYAALKLFGYMKK 338
D +N ++ G + ALKLF M +
Sbjct: 360 DSASFNIMVDGYVRSRRLWDALKLFDVMPE 389
>AT1G43980.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:16685832-16689502 REVERSE
Length = 633
Score = 125 bits (314), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 135/298 (45%), Gaps = 37/298 (12%)
Query: 73 HGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEM 132
H Q ++ GF R + + +Y +A ++F+++P K+ + WN L NG +
Sbjct: 27 HAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDIPDKNTITWNVCLKGLFKNGYL 86
Query: 133 EDAISLFHMMPLKDLSSFNILISGYSSCG------------------------------- 161
+A+ LF MP +D+ S+N +ISG SCG
Sbjct: 87 NNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSILASLV 146
Query: 162 ------EVLAARSIFDKMAIKDIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTM 215
E + +I ++ ++V WNS++ R G + A ++F M ++ +SWN +
Sbjct: 147 TCVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCL 206
Query: 216 LAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGL 275
+ C G A+D F M+ PD T + V+S C+ L L G + I G
Sbjct: 207 ILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALALCIKMGF 266
Query: 276 ASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLF 333
S+ V A +DM++KC ++ ++++F + + D N++I + H G AL+LF
Sbjct: 267 LSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCCGEDALRLF 324
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 96/340 (28%), Positives = 160/340 (47%), Gaps = 21/340 (6%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
MP +V WN +I + G E + + +MQ R +TF IL A+ C R G
Sbjct: 96 MPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSIL--ASLVTCV-RHG 152
Query: 70 FAFHGQTIKTGFYRH-IFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYAS 128
HG I +G R+ + V ++++MY L A +F M +D+V+WN ++ + +
Sbjct: 153 EQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSD 212
Query: 129 NGEMEDAISLFHMMPLKDLS----SFNILISGYSSCGEVLAARSIFDKMAIKDIVSWNSI 184
+G E A+ F +M ++ + ++++S S E+ + + IK NSI
Sbjct: 213 SGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQAL-ALCIKMGFLSNSI 271
Query: 185 L--------SACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMK 236
+ S C R D K LF+E+ +++ N+M+ +A+ LF
Sbjct: 272 VLGAGIDMFSKCNRLDDSVK---LFRELEKWDSVLCNSMIGSYSWHCCGEDALRLFILAM 328
Query: 237 TTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIE 296
T + PD T +SVLS+ + L+ G +H I G V T+LM+MY K GS++
Sbjct: 329 TQSVRPDKFTFSSVLSSMNAV-MLDHGADVHSLVIKLGFDLDTAVATSLMEMYFKTGSVD 387
Query: 297 QALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYM 336
A+ +F K KD+ WN +I GLA + +L +F +
Sbjct: 388 LAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIFNQL 427
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 94/183 (51%), Gaps = 4/183 (2%)
Query: 157 YSSCGEVLAARSIFDKMAIKDIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTML 216
Y G V+ A +FD + K+ ++WN L + G + A LF EMP ++ +SWNTM+
Sbjct: 49 YFKSGSVINALQLFDDIPDKNTITWNVCLKGLFKNGYLNNALDLFDEMPERDVVSWNTMI 108
Query: 217 AGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLA 276
+G + G + +F +M+ P T S+L++ + + G +IH AI SG++
Sbjct: 109 SGLVSCGFHEYGIRVFFDMQRWEIRPTEFT-FSILASL--VTCVRHGEQIHGNAICSGVS 165
Query: 277 SSPHVT-TALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGY 335
V ++MDMY + G + AL +F + +D+ WN +I + G+ AL F
Sbjct: 166 RYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWL 225
Query: 336 MKK 338
M++
Sbjct: 226 MRE 228
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 119/269 (44%), Gaps = 16/269 (5%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
M +V WN +I GN E A+ + M+ + D YT +++ G
Sbjct: 195 MEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKG 254
Query: 70 FAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASN 129
IK GF + V A I+M+ + D+ K+F + D V NSM+ +Y+ +
Sbjct: 255 KQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWH 314
Query: 130 GEMEDAISLF------HMMPLK-----DLSSFNILISGYSSCGEVLAARSIFDKMAIKDI 178
EDA+ LF + P K LSS N ++ + + L + FD D
Sbjct: 315 CCGEDALRLFILAMTQSVRPDKFTFSSVLSSMNAVMLDHGADVHSLVIKLGFDL----DT 370
Query: 179 VSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTT 238
S++ + G ++ A +F + K+ I WNT++ G + + E++ +F+++
Sbjct: 371 AVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIFNQLLMN 430
Query: 239 NCL-PDYLTATSVLSACAHLGSLETGIKI 266
L PD +T +L AC + G + GI+I
Sbjct: 431 QSLKPDRVTLMGILVACCYAGFVNEGIQI 459
>AT1G26900.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:9319756-9321474 REVERSE
Length = 572
Score = 125 bits (314), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 160/331 (48%), Gaps = 11/331 (3%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTI 77
+N +I+ + + E+A + ++ G D ++F LK+ + IG HG +
Sbjct: 93 FNTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSIGEGLHGIAL 152
Query: 78 KTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVK-DLVAWNSMLDAYASNGEMEDAI 136
++GF ++ ALI+ Y +DA K+F+ MP D V ++++++ Y + A+
Sbjct: 153 RSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALAL 212
Query: 137 SLFHMMP----LKDLSSFNILISGYSSCGEVLAARSIFDKMAIK-----DIVSWNSILSA 187
LF +M + ++S+ +S S G++ A S + IK D+ +++
Sbjct: 213 DLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAH-VLCIKIGLDLDLHLITALIGM 271
Query: 188 CTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTA 247
+ G + A +F K+ ++WN M+ + G E V L +MK P+ T
Sbjct: 272 YGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTF 331
Query: 248 TSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQV 307
+LS+CA+ + G + +A + TAL+DMYAK G +E+A++IF + +
Sbjct: 332 VGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKD 391
Query: 308 KDIYCWNAIISGLALHGHGYAALKLFGYMKK 338
KD+ W A+ISG HG A+ LF M++
Sbjct: 392 KDVKSWTAMISGYGAHGLAREAVTLFNKMEE 422
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 131/267 (49%), Gaps = 16/267 (5%)
Query: 73 HGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEM 132
H IK G + + TALI MYG + A ++F+ KD+V WN M+D YA G +
Sbjct: 250 HVLCIKIGLDLDLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLL 309
Query: 133 EDAISLFHMMPLKDL----SSFNILISGYSSCGEVLAARSIFDKMAIKDIVSWNSILSAC 188
E+ + L M + + S+F L+S + R++ D + ++ ++ ++IL
Sbjct: 310 EECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLE-EERIALDAILGTA 368
Query: 189 -----TRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNC--L 241
+ G +EKA +F M K+ SW M++G G EAV LF++M+ NC
Sbjct: 369 LVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVR 428
Query: 242 PDYLTATSVLSACAHLGSLETGIKI--HVYAIYSGLASSPHVTTALMDMYAKCGSIEQAL 299
P+ +T VL+AC+H G + GI+ + YS H ++D+ + G +E+A
Sbjct: 429 PNEITFLVVLNACSHGGLVMEGIRCFKRMVEAYSFTPKVEHY-GCVVDLLGRAGQLEEAY 487
Query: 300 QIFFKAQV-KDIYCWNAIISGLALHGH 325
++ + D W A+++ ++G+
Sbjct: 488 ELIRNLPITSDSTAWRALLAACRVYGN 514
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/266 (31%), Positives = 128/266 (48%), Gaps = 18/266 (6%)
Query: 72 FHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGE 131
HG +KTG + F + L+ L A +FE++ +L +N+M+ Y+ + E
Sbjct: 47 IHGYMVKTGLDKDDFAVSKLLAFSSVLDIRY-ASSIFEHVSNTNLFMFNTMIRGYSISDE 105
Query: 132 MEDAISLFHMMPLKDLS----SFNILISGYS-----SCGEVL---AARSIFDKMAIKDIV 179
E A S+F+ + K L+ SF + S S GE L A RS F M D+
Sbjct: 106 PERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSIGEGLHGIALRSGF--MVFTDL- 162
Query: 180 SWNSILSACTRAGDMEKAFALFQEMPMK-NTISWNTMLAGCLQRGQFSEAVDLFDEMKTT 238
N+++ G + A +F EMP + ++++T++ G LQ + + A+DLF M+ +
Sbjct: 163 -RNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKS 221
Query: 239 NCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQA 298
+ + T S LSA + LG L HV I GL H+ TAL+ MY K G I A
Sbjct: 222 EVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSA 281
Query: 299 LQIFFKAQVKDIYCWNAIISGLALHG 324
+IF A KD+ WN +I A G
Sbjct: 282 RRIFDCAIRKDVVTWNCMIDQYAKTG 307
>AT1G06140.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:1864796-1866472 FORWARD
Length = 558
Score = 125 bits (313), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 146/312 (46%), Gaps = 9/312 (2%)
Query: 35 VLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTIKTGFYRHIFVQTALINM 94
+L Y M+ H D++ +KA G HG +K G + +V +L+ M
Sbjct: 94 LLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGILIHGLAMKNGLDKDDYVAPSLVEM 153
Query: 95 YGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMPLKDLSSFNI-L 153
Y L A K+F+ +PV++ V W ++ Y + + LF +M L+ + L
Sbjct: 154 YAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTL 213
Query: 154 ISGYSSCGEVLAAR--------SIFDKMAIKDIVSWNSILSACTRAGDMEKAFALFQEMP 205
I +CG V A + SI + SI+ + ++ A LF+
Sbjct: 214 ICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSV 273
Query: 206 MKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIK 265
+N + W T+++G + + EA DLF +M + LP+ T ++L +C+ LGSL G
Sbjct: 274 DRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKS 333
Query: 266 IHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGH 325
+H Y I +G+ T+ +DMYA+CG+I+ A +F +++ W+++I+ ++G
Sbjct: 334 VHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGL 393
Query: 326 GYAALKLFGYMK 337
AL F MK
Sbjct: 394 FEEALDCFHKMK 405
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 149/317 (47%), Gaps = 11/317 (3%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTI 77
W ++K ++ + + M+ G D T L+KA G A ++G HG +I
Sbjct: 178 WGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSI 237
Query: 78 KTGFY-RHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAI 136
+ F + ++Q ++I+MY +A K+FE +++V W +++ +A +A
Sbjct: 238 RRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAF 297
Query: 137 SLFHMM----PLKDLSSFNILISGYSSCGEVLAARSIFDKMAIK----DIVSWNSILSAC 188
LF M L + + ++ SS G + +S+ M D V++ S +
Sbjct: 298 DLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMY 357
Query: 189 TRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTAT 248
R G+++ A +F MP +N ISW++M+ G F EA+D F +MK+ N +P+ +T
Sbjct: 358 ARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFV 417
Query: 249 SVLSACAHLGSLETGIK-IHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQV 307
S+LSAC+H G+++ G K G+ ++D+ + G I +A V
Sbjct: 418 SLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPV 477
Query: 308 KDI-YCWNAIISGLALH 323
K + W A++S +H
Sbjct: 478 KPMASAWGALLSACRIH 494
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 86/165 (52%), Gaps = 4/165 (2%)
Query: 177 DIVSWNSILSACTRAGDMEKAFALFQEMP--MKNTISWNTMLAGCLQRGQ--FSEAVDLF 232
++V +S+ +A ++ ++ A + F +P +N SWNT+L+G + +S+ + L+
Sbjct: 38 EVVLGSSLTNAYIQSNRLDFATSSFNRIPCWKRNRHSWNTILSGYSKSKTCCYSDVLLLY 97
Query: 233 DEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKC 292
+ M+ D + AC LG LE GI IH A+ +GL +V +L++MYA+
Sbjct: 98 NRMRRHCDGVDSFNLVFAIKACVGLGLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQL 157
Query: 293 GSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMK 337
G++E A ++F + V++ W ++ G + +LF M+
Sbjct: 158 GTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMR 202
>AT1G28690.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:10080042-10081604 REVERSE
Length = 520
Score = 125 bits (313), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 153/319 (47%), Gaps = 45/319 (14%)
Query: 65 ASRIGFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLD 124
A + G H IKTGF + + L+ ++ C + A ++F+ +P L A+N M+
Sbjct: 49 APKAGKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMIS 108
Query: 125 AYASNGEMEDAISLFHMMPLK--------------------------------------- 145
Y +G +++ + L M
Sbjct: 109 GYLKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIK 168
Query: 146 -DLSSFNILISG----YSSCGEVLAARSIFDKMAIKDIVSWNSILSACTRAGDMEKAFAL 200
D+ ++LI+ Y G++ +AR++F+ M +++V S++S G +E A +
Sbjct: 169 CDVELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEI 228
Query: 201 FQEMPMKNTISWNTMLAGCLQRGQFSE-AVDLFDEMKTTNCLPDYLTATSVLSACAHLGS 259
F +K+ + +N M+ G + G+ ++ +VD++ M+ P+ T SV+ AC+ L S
Sbjct: 229 FNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTS 288
Query: 260 LETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISG 319
E G ++H + SG+ + + ++L+DMYAKCG I A ++F + Q K+++ W ++I G
Sbjct: 289 HEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDG 348
Query: 320 LALHGHGYAALKLFGYMKK 338
+G+ AL+LF MK+
Sbjct: 349 YGKNGNPEEALELFTRMKE 367
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 99/393 (25%), Positives = 173/393 (44%), Gaps = 66/393 (16%)
Query: 4 LVCNCF---------MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFP 54
L C C +P + +N +I ++ G ++ +L M G +AD YT
Sbjct: 80 LKCGCLSYARQVFDELPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTLS 139
Query: 55 ILLKAAGKNCASRI-----GFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFE 109
++LKA+ ++ I H + IK + TAL++ Y A +FE
Sbjct: 140 MVLKASNSRGSTMILPRSLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFE 199
Query: 110 NMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMPLKDLSSFNILISGYSSCGEVLAARSI 169
M +++V SM+ Y + G +EDA +F+ +KD+ +N ++ G+S GE A RS+
Sbjct: 200 TMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGET-AKRSV 258
Query: 170 FDKMAIK------DIVSWNSILSACT---------------------------------- 189
++++ +I ++ S++ AC+
Sbjct: 259 DMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMY 318
Query: 190 -RAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTAT 248
+ G + A +F +M KN SW +M+ G + G EA++LF MK P+Y+T
Sbjct: 319 AKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFL 378
Query: 249 SVLSACAHLGSLETGIKI--HVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKA- 305
LSAC+H G ++ G +I + YS H ++D+ + G + +A + F +A
Sbjct: 379 GALSACSHSGLVDKGYEIFESMQRDYSMKPKMEHY-ACIVDLMGRAGDLNKAFE-FARAM 436
Query: 306 -QVKDIYCWNAIISGLALHGH----GYAALKLF 333
+ D W A++S LHG+ AA +LF
Sbjct: 437 PERPDSDIWAALLSSCNLHGNVELASIAASELF 469
>AT1G59720.1 | Symbols: CRR28 | CRR28 (CHLORORESPIRATORY
REDUCTION28); endonuclease | chr1:21939868-21941784
REVERSE
Length = 638
Score = 124 bits (312), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 96/331 (29%), Positives = 152/331 (45%), Gaps = 32/331 (9%)
Query: 18 WNEIIKK-HMLVGNAEQAVLTYVNMQVHGFRA-DNYTFPILLKAAGKNCASRIGFA---- 71
WN +I+ V E+A + Y M G + D +TFP +LKA CA GF+
Sbjct: 117 WNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKA----CAYIFGFSEGKQ 172
Query: 72 FHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGE 131
H Q +K GF ++V LI++YG+ C A K+F+ MP + LV+WNSM+DA GE
Sbjct: 173 VHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGE 232
Query: 132 MEDAISLFHMMPLKDLSSFNILISGYSSCGEV-------LAARSIFDKMAIK---DIVSW 181
+ A+ LF M + S S+C + A + K + D++
Sbjct: 233 YDSALQLFREMQRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVK 292
Query: 182 NSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEM--KTTN 239
NS++ + G + A +FQ M ++ SWN M+ G G+ EA++ FD M K N
Sbjct: 293 NSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKREN 352
Query: 240 CLPDYLTATSVLSACAHLGSLETGIK-----IHVYAIYSGLASSPHVTTALMDMYAKCGS 294
P+ +T +L AC H G + G + + Y I L ++D+ A+ G
Sbjct: 353 VRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEH----YGCIVDLIARAGY 408
Query: 295 IEQALQIFFKAQVK-DIYCWNAIISGLALHG 324
I +A+ + +K D W +++ G
Sbjct: 409 ITEAIDMVMSMPMKPDAVIWRSLLDACCKKG 439
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 134/283 (47%), Gaps = 21/283 (7%)
Query: 72 FHGQTIKTGFYRH---IFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYAS 128
H T++T + +F+ ++ + + A ++F+++ WN+++ A A
Sbjct: 67 LHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRACAH 126
Query: 129 N-GEMEDAISLFHMM-------PLKDLSSFNI----LISGYSSCGEVLAARSIFDKMAIK 176
+ E+A L+ M P K F + I G+S +V I
Sbjct: 127 DVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHC--QIVKHGFGG 184
Query: 177 DIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMK 236
D+ N ++ G ++ A +F EMP ++ +SWN+M+ ++ G++ A+ LF EM+
Sbjct: 185 DVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQ 244
Query: 237 TTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYS---GLASSPHVTTALMDMYAKCG 293
+ PD T SVLSACA LGSL G H + + +A V +L++MY KCG
Sbjct: 245 RS-FEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCG 303
Query: 294 SIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYM 336
S+ A Q+F Q +D+ WNA+I G A HG A+ F M
Sbjct: 304 SLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRM 346
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 111/242 (45%), Gaps = 21/242 (8%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
MP + WN +I + G + A+ + MQ F D YT +L A + +G
Sbjct: 212 MPERSLVSWNSMIDALVRFGEYDSALQLFREMQ-RSFEPDGYTMQSVLSACAGLGSLSLG 270
Query: 70 ---FAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAY 126
AF + + V+ +LI MY A ++F+ M +DL +WN+M+ +
Sbjct: 271 TWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGF 330
Query: 127 ASNGEMEDAISLFHMMPLK------DLSSFNILISGYSSCGEVLAARSIFDKMAIKD--- 177
A++G E+A++ F M K + +F L+ + G V R FD M ++D
Sbjct: 331 ATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFD-MMVRDYCI 389
Query: 178 ---IVSWNSILSACTRAGDMEKAFALFQEMPMK-NTISWNTMLAGCLQRGQFSEAVDLFD 233
+ + I+ RAG + +A + MPMK + + W ++L C ++G +V+L +
Sbjct: 390 EPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGA---SVELSE 446
Query: 234 EM 235
E+
Sbjct: 447 EI 448
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 76/160 (47%), Gaps = 2/160 (1%)
Query: 181 WNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQR-GQFSEAVDLFDEM-KTT 238
+ IL + D+ AF +F + ++ WNT++ C + EA L+ +M +
Sbjct: 86 YGKILQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERG 145
Query: 239 NCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQA 298
PD T VL ACA++ G ++H + G +V L+ +Y CG ++ A
Sbjct: 146 ESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLA 205
Query: 299 LQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMKK 338
++F + + + WN++I L G +AL+LF M++
Sbjct: 206 RKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQR 245
>AT1G31920.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11461864-11463684 REVERSE
Length = 606
Score = 124 bits (311), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 153/316 (48%), Gaps = 19/316 (6%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTI 77
+N +I+ ++ V + E+A+ Y M G DN+T+P LLKA + + R G HGQ
Sbjct: 100 FNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQIHGQVF 159
Query: 78 KTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAIS 137
K G +FVQ +LINMYG + +FE + K +W+SM+ A A G + +
Sbjct: 160 KLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLL 219
Query: 138 LFHMMPLKDLSSFNI------LISGYSSCGEVLAARS-------IFDKMAIKDIVSWNSI 184
LF M S N+ ++S +C A + ++ +I+ S+
Sbjct: 220 LFRGM----CSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSL 275
Query: 185 LSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDY 244
+ + G ++KA +FQ+M +N ++++ M++G G+ A+ +F +M PD+
Sbjct: 276 VDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDH 335
Query: 245 LTATSVLSACAHLGSLETGIKIHVYAIYSG-LASSPHVTTALMDMYAKCGSIEQALQIFF 303
+ SVL+AC+H G ++ G ++ + G + + L+D+ + G +E+AL+
Sbjct: 336 VVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQ 395
Query: 304 KAQV-KDIYCWNAIIS 318
+ K+ W +S
Sbjct: 396 SIPIEKNDVIWRTFLS 411
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 126/229 (55%), Gaps = 9/229 (3%)
Query: 119 WNSMLDAYASNGEMEDAISLFHMMPLK----DLSSFNILISGYSSCGEVLAARSIFD--- 171
+N+M+ Y + E+A+ ++ M + D ++ L+ + + + I
Sbjct: 100 FNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQIHGQVF 159
Query: 172 KMAIK-DIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVD 230
K+ ++ D+ NS+++ R G+ME + A+F+++ K SW++M++ G +SE +
Sbjct: 160 KLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLL 219
Query: 231 LFDEM-KTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMY 289
LF M TN + S L ACA+ G+L G+ IH + + + + V T+L+DMY
Sbjct: 220 LFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMY 279
Query: 290 AKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMKK 338
KCG +++AL IF K + ++ ++A+ISGLALHG G +AL++F M K
Sbjct: 280 VKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIK 328
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 76/156 (48%), Gaps = 3/156 (1%)
Query: 184 ILSACTRAG---DMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNC 240
+L+ C +G M A ++F+ + T +NTM+ G + F EA+ ++EM
Sbjct: 69 VLAKCAHSGWENSMNYAASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGN 128
Query: 241 LPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQ 300
PD T +L AC L S+ G +IH GL + V +L++MY +CG +E +
Sbjct: 129 EPDNFTYPCLLKACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSA 188
Query: 301 IFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYM 336
+F K + K W++++S A G L LF M
Sbjct: 189 VFEKLESKTAASWSSMVSARAGMGMWSECLLLFRGM 224
>AT3G20730.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:7247095-7248878 FORWARD
Length = 564
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 164/337 (48%), Gaps = 16/337 (4%)
Query: 14 EVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFH 73
+V W +I + G A+L + M +A+ +T+ +LK+ + G H
Sbjct: 77 DVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIH 136
Query: 74 GQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEME 133
G K ++ V++AL+++Y +A F++M +DLV+WN+M+D Y +N +
Sbjct: 137 GSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACAD 196
Query: 134 DAISLFHMMPLK----DLSSFNILI--SGYSSCGEVLAARSIFDKMAIK-----DIVSWN 182
+ SLF +M + D +F L+ S C E++ S +AIK
Sbjct: 197 TSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIV---SELHGLAIKLGFGRSSALIR 253
Query: 183 SILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQ-FSEAVDLFDEMKTTNCL 241
S+++A + G + A+ L + ++ +S ++ G Q+ S+A D+F +M
Sbjct: 254 SLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTK 313
Query: 242 PDYLTATSVLSACAHLGSLETGIKIHVYAIYSG-LASSPHVTTALMDMYAKCGSIEQALQ 300
D + +S+L C + S+ G +IH +A+ S + + +L+DMYAK G IE A+
Sbjct: 314 MDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVL 373
Query: 301 IFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMK 337
F + + KD+ W ++I+G HG+ A+ L+ M+
Sbjct: 374 AFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRME 410
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 154/330 (46%), Gaps = 14/330 (4%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
M ++ WN +I + A+ + + M G + D +TF LL+A+ I
Sbjct: 174 MKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIV 233
Query: 70 FAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYAS- 128
HG IK GF R + +L+N Y A+A K+ E +DL++ +++ ++
Sbjct: 234 SELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQ 293
Query: 129 NGEMEDAISLFHMMPLKDLSSFNILISGYSSCGEVLAARSIFDKM---AIK------DIV 179
N DA +F M +++S +A+ +I ++ A+K D+
Sbjct: 294 NNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVA 353
Query: 180 SWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTN 239
NS++ ++G++E A F+EM K+ SW +++AG + G F +A+DL++ M+
Sbjct: 354 LGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHER 413
Query: 240 CLPDYLTATSVLSACAHLGSLETGIKIHVYAIYS-GLASSPHVTTALMDMYAKCGSIEQA 298
P+ +T S+LSAC+H G E G KI+ I G+ + + ++DM A+ G +E+A
Sbjct: 414 IKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEA 473
Query: 299 LQIFFKAQ---VKDIYCWNAIISGLALHGH 325
+ + W A + HG+
Sbjct: 474 YALIRSKEGIVSLSSSTWGAFLDACRRHGN 503
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 122/258 (47%), Gaps = 8/258 (3%)
Query: 72 FHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGE 131
HG +I GF ++ ++ LI++Y A K+F+ + +D+V+W +M+ ++ G
Sbjct: 34 IHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGY 93
Query: 132 MEDAISLFHMMPLKDLSSFNILI-SGYSSCGEVLAAR-------SIFDKMAIKDIVSWNS 183
DA+ LF M +D+ + S SC ++ + S+ +++ ++
Sbjct: 94 HPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSA 153
Query: 184 ILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPD 243
+LS R G ME+A F M ++ +SWN M+ G + LF M T PD
Sbjct: 154 LLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPD 213
Query: 244 YLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFF 303
T S+L A + LE ++H AI G S + +L++ Y KCGS+ A ++
Sbjct: 214 CFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHE 273
Query: 304 KAQVKDIYCWNAIISGLA 321
+ +D+ A+I+G +
Sbjct: 274 GTKKRDLLSCTALITGFS 291
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 76/147 (51%)
Query: 190 RAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATS 249
+ GD++ A LF + ++ +SW M++ + G +A+ LF EM + + T S
Sbjct: 59 KQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGS 118
Query: 250 VLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKD 309
VL +C LG L+ G++IH A + V +AL+ +YA+CG +E+A F + +D
Sbjct: 119 VLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERD 178
Query: 310 IYCWNAIISGLALHGHGYAALKLFGYM 336
+ WNA+I G + + LF M
Sbjct: 179 LVSWNAMIDGYTANACADTSFSLFQLM 205
>AT4G31070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:15118696-15120537 REVERSE
Length = 613
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 145/284 (51%), Gaps = 10/284 (3%)
Query: 65 ASRIGFAFHGQT-IKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSML 123
+S++ FH + + + TAL++MY A A +F+ M VK+ V+W +M+
Sbjct: 164 SSKVARMFHALVLVDERMQESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMI 223
Query: 124 DAYASNGEMEDAISLFHMMPLKDLSSFNI-LISGYSSCGEVLAARSIFDKM---AIKDIV 179
+N E + LF M ++L + L+S +C E+ S+ ++ + +
Sbjct: 224 SGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVELNYGSSLVKEIHGFSFRHGC 283
Query: 180 SWNSILSAC-----TRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDE 234
+ L+A R G++ + LF+ +++ + W++M++G + G SE ++L ++
Sbjct: 284 HADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQ 343
Query: 235 MKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGS 294
M+ + +T +++SAC + L +H + G S + AL+DMYAKCGS
Sbjct: 344 MRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGS 403
Query: 295 IEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMKK 338
+ A ++F++ KD+ W+++I+ LHGHG AL++F M K
Sbjct: 404 LSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKGMIK 447
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 152/317 (47%), Gaps = 14/317 (4%)
Query: 36 LTYVNMQVHGFRADNYT--FPILLKA-AGKNCASRIGFAFHGQTIKTGFYRHIFVQTALI 92
L +++H + +T P ++KA A + +G H +K G V +LI
Sbjct: 30 LRLYKLKIHSLGTNGFTAILPSVIKACAFQQEPFLLGAQLHCLCLKAGADCDTVVSNSLI 89
Query: 93 NMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMM------PLKD 146
+MY K+F+ M +D V++ S++++ +G + +A+ L M P +
Sbjct: 90 SMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMYFYGFIPKSE 149
Query: 147 L-SSFNILISGYSSCGEV---LAARSIFDKMAIKDIVSWNSILSACTRAGDMEKAFALFQ 202
L +S L + S +V A + D+ + ++ +++ + D AF +F
Sbjct: 150 LVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFDDHAAAFHVFD 209
Query: 203 EMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLET 262
+M +KN +SW M++GC+ + VDLF M+ N P+ +T SVL AC L +
Sbjct: 210 QMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVELNYGSS 269
Query: 263 GIK-IHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLA 321
+K IH ++ G + +T A M MY +CG++ + +F ++V+D+ W+++ISG A
Sbjct: 270 LVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYA 329
Query: 322 LHGHGYAALKLFGYMKK 338
G + L M+K
Sbjct: 330 ETGDCSEVMNLLNQMRK 346
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 141/318 (44%), Gaps = 10/318 (3%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGK-NCASRIGFAFHGQT 76
W +I + N E V + MQ R + T +L A + N S + HG +
Sbjct: 219 WTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVELNYGSSLVKEIHGFS 278
Query: 77 IKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAI 136
+ G + + A + MY + + +FE V+D+V W+SM+ YA G+ + +
Sbjct: 279 FRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVM 338
Query: 137 SLFHMMPLKDLSSFNI-LISGYSSC--GEVLAARSIFDKMAIK-----DIVSWNSILSAC 188
+L + M + + + ++ L++ S+C +L+ S +K I+ N+++
Sbjct: 339 NLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMY 398
Query: 189 TRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTAT 248
+ G + A +F E+ K+ +SW++M+ G SEA+++F M D +
Sbjct: 399 AKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFL 458
Query: 249 SVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVK 308
++LSAC H G +E I A + + +++ + G I+ A ++ +K
Sbjct: 459 AILSACNHAGLVEEAQTIFTQAGKYHMPVTLEHYACYINLLGRFGKIDDAFEVTINMPMK 518
Query: 309 -DIYCWNAIISGLALHGH 325
W++++S HG
Sbjct: 519 PSARIWSSLLSACETHGR 536
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 109/226 (48%), Gaps = 13/226 (5%)
Query: 14 EVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFH 73
+V W+ +I + G+ + + M+ G A++ T ++ A + H
Sbjct: 317 DVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVH 376
Query: 74 GQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEME 133
Q +K GF HI + ALI+MY + A ++F + KDLV+W+SM++AY +G
Sbjct: 377 SQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGS 436
Query: 134 DAISLFHMM-----PLKDLSSFNILISGYSSCGEVLAARSIFDK-----MAIKDIVSWNS 183
+A+ +F M + D+ +F ++S + G V A++IF + M + + +
Sbjct: 437 EALEIFKGMIKGGHEVDDM-AFLAILSACNHAGLVEEAQTIFTQAGKYHMPVT-LEHYAC 494
Query: 184 ILSACTRAGDMEKAFALFQEMPMKNTIS-WNTMLAGCLQRGQFSEA 228
++ R G ++ AF + MPMK + W+++L+ C G+ A
Sbjct: 495 YINLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACETHGRLDVA 540
>AT1G71490.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:26933326-26935371 REVERSE
Length = 681
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/366 (24%), Positives = 157/366 (42%), Gaps = 46/366 (12%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTI 77
WN +I + E+ + Y M G R D +T+P +LKA G+ G HG
Sbjct: 112 WNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIE 171
Query: 78 KTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAIS 137
+ + ++V ALI+MY A ++F+ M +D V+WN++++ YAS G +A
Sbjct: 172 VSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFE 231
Query: 138 LFHMMPLKDLS----SFNILISGYSSCGEVLAARSIFDKM-------------------- 173
LF M + ++NI+ G G + A + +M
Sbjct: 232 LFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACS 291
Query: 174 ---AIK-----------------DIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWN 213
AI+ D V N++++ ++ D+ A +F++ + +WN
Sbjct: 292 LIGAIRLGKEIHGLAIHSSYDGIDNVR-NTLITMYSKCKDLRHALIVFRQTEENSLCTWN 350
Query: 214 TMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYS 273
++++G Q + EA L EM P+ +T S+L CA + +L+ G + H Y +
Sbjct: 351 SIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRR 410
Query: 274 G-LASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKL 332
+ +L+D+YAK G I A Q+ +D + ++I G G G AL L
Sbjct: 411 KCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALAL 470
Query: 333 FGYMKK 338
F M +
Sbjct: 471 FKEMTR 476
Score = 117 bits (294), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 129/296 (43%), Gaps = 43/296 (14%)
Query: 69 GFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYAS 128
G H I +G H + L+ Y + +A + EN + + WN ++ +YA
Sbjct: 62 GVQVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDILHPLPWNVLIASYAK 121
Query: 129 NGEMEDAISLFHMMPLK--------------------------------DLSSF------ 150
N E+ I+ + M K ++SS+
Sbjct: 122 NELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYV 181
Query: 151 -NILISGYSSCGEVLAARSIFDKMAIKDIVSWNSILSACTRAGDMEKAFALFQEMPMK-- 207
N LIS Y + AR +FD+M +D VSWN++++ G +AF LF +M
Sbjct: 182 CNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGV 241
Query: 208 --NTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIK 265
+ I+WN + GCLQ G + A+ L M+ D + L AC+ +G++ G +
Sbjct: 242 EVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKE 301
Query: 266 IHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLA 321
IH AI+S +V L+ MY+KC + AL +F + + + WN+IISG A
Sbjct: 302 IHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYA 357
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 139/336 (41%), Gaps = 15/336 (4%)
Query: 13 LEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAF 72
+ V WN I + GN A+ M+ D I LKA A R+G
Sbjct: 243 VSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEI 302
Query: 73 HGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEM 132
HG I + + V+ LI MY A +F L WNS++ YA +
Sbjct: 303 HGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKS 362
Query: 133 EDAISLFHMMPLKDLSSFNI-LISGYSSCGEVLAARS-------IFDKMAIKD-IVSWNS 183
E+A L M + +I L S C + + I + KD + WNS
Sbjct: 363 EEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNS 422
Query: 184 ILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPD 243
++ ++G + A + M ++ +++ +++ G +G+ A+ LF EM + PD
Sbjct: 423 LVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPD 482
Query: 244 YLTATSVLSACAHLGSLETGIKIHV-YAIYSGLASSPHVTTALMDMYAKCGSIEQALQIF 302
++T +VLSAC+H + G ++ + G+ + ++D+Y + G + +A I
Sbjct: 483 HVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDII 542
Query: 303 FKAQVKDI-YCWNAIISGLALHGH----GYAALKLF 333
K W +++ +HG+ +AA KL
Sbjct: 543 HNMPYKPSGATWATLLNACHIHGNTQIGKWAAEKLL 578
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 99/225 (44%), Gaps = 17/225 (7%)
Query: 127 ASNGEMEDAISLFHMMPLKDLSSFN---ILISG---YSSCGEVLA--ARSIFDKMAIKDI 178
AS+G + DA F ++ L+ S+ + +L S S+C +V A A I
Sbjct: 14 ASHGHLHDAFKTFSLLRLQSSSAVSDDLVLHSAASLLSACVDVRAFLAGVQVHAHCISSG 73
Query: 179 VSWNSILSACTRAGDMEKAFALFQEMP--MKNT-----ISWNTMLAGCLQRGQFSEAVDL 231
V ++S+L + AF L E ++N+ + WN ++A + F E +
Sbjct: 74 VEYHSVL--VPKLVTFYSAFNLHNEAQSIIENSDILHPLPWNVLIASYAKNELFEEVIAA 131
Query: 232 FDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAK 291
+ M + PD T SVL AC + G +H S SS +V AL+ MY +
Sbjct: 132 YKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKR 191
Query: 292 CGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYM 336
++ A ++F + +D WNA+I+ A G A +LF M
Sbjct: 192 FRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKM 236
>AT1G71420.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:26917822-26920059 REVERSE
Length = 745
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/346 (26%), Positives = 157/346 (45%), Gaps = 25/346 (7%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
MP V W +I ++ GN ++ + +M H F + +T +L + C G
Sbjct: 122 MPERNVVSWTALITGYVQAGNEQEGFCLFSSMLSHCF-PNEFTLSSVLTS----CRYEPG 176
Query: 70 FAFHGQTIKTGFYRHIFVQTALINMYGTLHCTA---DACKMFENMPVKDLVAWNSMLDAY 126
HG +K G + I+V A+I+MYG H A +A +FE + K+LV WNSM+ A+
Sbjct: 177 KQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAF 236
Query: 127 ASNGEMEDAISLFHMM-----PLKDLSSFNILISGYSSC----GEVLAARSIFDKMAIKD 177
+ AI +F M + NI S Y S EV + +K
Sbjct: 237 QCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYKSSDLVPNEVSKCCLQLHSLTVKS 296
Query: 178 -IVSWNSILSACTRA-----GDMEKAFALFQEMPM-KNTISWNTMLAGCLQRGQFSEAVD 230
+V+ + +A + D + LF EM ++ ++WN ++ A+
Sbjct: 297 GLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITA-FAVYDPERAIH 355
Query: 231 LFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYA 290
LF +++ PD+ T +SVL ACA L + + IH I G + + +L+ YA
Sbjct: 356 LFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYA 415
Query: 291 KCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYM 336
KCGS++ +++F +D+ WN+++ +LHG + L +F M
Sbjct: 416 KCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKM 461
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 146/327 (44%), Gaps = 24/327 (7%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGK------NCASRIGFA 71
WN +I ++A+ ++ M G D T + + K N S+
Sbjct: 229 WNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYKSSDLVPNEVSKCCLQ 288
Query: 72 FHGQTIKTGFYRHIFVQTALINMYGT-LHCTADACKMFENMP-VKDLVAWNSMLDAYASN 129
H T+K+G V TALI +Y L D K+F M +D+VAWN ++ A+A
Sbjct: 289 LHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAFAVY 348
Query: 130 GEMEDAISLFHMMPLKDLS-SFNILISGYSSCGEVLAARSIFDKMA-------IKDIVSW 181
+ E AI LF + + LS + S +C ++ AR A + D V
Sbjct: 349 -DPERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLN 407
Query: 182 NSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCL 241
NS++ A + G ++ +F +M ++ +SWN+ML GQ + +F +M
Sbjct: 408 NSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKMDIN--- 464
Query: 242 PDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVT--TALMDMYAKCGSIEQAL 299
PD T ++LSAC+H G +E G++I +++ + P + ++DM ++ +A
Sbjct: 465 PDSATFIALLSACSHAGRVEEGLRI-FRSMFEKPETLPQLNHYACVIDMLSRAERFAEAE 523
Query: 300 QIFFKAQVK-DIYCWNAIISGLALHGH 325
++ + + D W A++ HG+
Sbjct: 524 EVIKQMPMDPDAVVWIALLGSCRKHGN 550
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 77/348 (22%), Positives = 157/348 (45%), Gaps = 25/348 (7%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
+PS R + E ++ + G+ +AV + + V Y A +N I
Sbjct: 21 LPSALKREFVEGLRTLVRSGDIRRAVSLFYSAPVELQSQQAYAALFQACAEQRNLLDGIN 80
Query: 70 FAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASN 129
H + + +++ + LINMY A ++F+ MP +++V+W +++ Y
Sbjct: 81 LHHHMLSHPYCYSQNVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQA 140
Query: 130 GEMEDAISLF-----HMMPLKDLSSFNILISGYSSCGEVLAARSIFDKMAIK-DIVSWNS 183
G ++ LF H P + + ++L S G+ + ++ K+ + I N+
Sbjct: 141 GNEQEGFCLFSSMLSHCFP-NEFTLSSVLTSCRYEPGKQVHGLAL--KLGLHCSIYVANA 197
Query: 184 ILSACTRAGD---MEKAFALFQEMPMKNTISWNTMLAG--CLQRGQFSEAVDLFDEMKTT 238
++S R D +A+ +F+ + KN ++WN+M+A C G+ +A+ +F M +
Sbjct: 198 VISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGK--KAIGVFMRMHSD 255
Query: 239 NCLPDYLTATSVLSACAHLGSL------ETGIKIHVYAIYSGLASSPHVTTALMDMYAK- 291
D T ++ S+ L + +++H + SGL + V TAL+ +Y++
Sbjct: 256 GVGFDRATLLNICSSLYKSSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSEM 315
Query: 292 CGSIEQALQIFFK-AQVKDIYCWNAIISGLALHGHGYAALKLFGYMKK 338
++F + + +DI WN II+ A++ A+ LFG +++
Sbjct: 316 LEDYTDCYKLFMEMSHCRDIVAWNGIITAFAVYD-PERAIHLFGQLRQ 362
>AT2G36730.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15405068-15406573 REVERSE
Length = 501
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 156/316 (49%), Gaps = 11/316 (3%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTI 77
WN + + + + +++ Y M+ G + + TFP LLKA G + +
Sbjct: 81 WNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEVL 140
Query: 78 KTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAIS 137
K GF ++V LI++YGT T+DA K+F+ M +++V+WNS++ A NG++
Sbjct: 141 KHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFE 200
Query: 138 LFHMMPLK----DLSSFNILIS---GYSSCGEVLAARSIFDKMAIKDIVSWNSILSACTR 190
F M K D ++ +L+S G S G+++ ++ + ++ + + +++ +
Sbjct: 201 CFCEMIGKRFCPDETTMVVLLSACGGNLSLGKLVHSQVMVRELELNCRLG-TALVDMYAK 259
Query: 191 AGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDE-MKTTNCLPDYLTATS 249
+G +E A +F+ M KN +W+ M+ G Q G EA+ LF + MK ++ P+Y+T
Sbjct: 260 SGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLG 319
Query: 250 VLSACAHLGSLETGIK-IHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVK 308
VL AC+H G ++ G K H + A++D+ + G + +A K +
Sbjct: 320 VLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFE 379
Query: 309 -DIYCWNAIISGLALH 323
D W ++S ++H
Sbjct: 380 PDAVVWRTLLSACSIH 395
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 111/235 (47%), Gaps = 22/235 (9%)
Query: 118 AWNSMLDAYASNGEMEDAISLFHMMP--------------LKDLSSFNILISGYSSCGEV 163
WN + Y+S+ ++I ++ M LK +SF L +G EV
Sbjct: 80 TWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEV 139
Query: 164 LAARSIFDKMAIKDIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRG 223
L FD +++ + C + D K +F EM +N +SWN+++ ++ G
Sbjct: 140 LKHGFDFDVYVGNNLIH---LYGTCKKTSDARK---VFDEMTERNVVSWNSIMTALVENG 193
Query: 224 QFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTT 283
+ + + F EM PD T +LSAC G+L G +H + L + + T
Sbjct: 194 KLNLVFECFCEMIGKRFCPDETTMVVLLSACG--GNLSLGKLVHSQVMVRELELNCRLGT 251
Query: 284 ALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMKK 338
AL+DMYAK G +E A +F + K+++ W+A+I GLA +G AL+LF M K
Sbjct: 252 ALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMK 306
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 98/222 (44%), Gaps = 15/222 (6%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
M V WN I+ + G + M F D T +LL A G N + +G
Sbjct: 174 MTERNVVSWNSIMTALVENGKLNLVFECFCEMIGKRFCPDETTMVVLLSACGGNLS--LG 231
Query: 70 FAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASN 129
H Q + + + TAL++MY A +FE M K++ W++M+ A
Sbjct: 232 KLVHSQVMVRELELNCRLGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQY 291
Query: 130 GEMEDAISLFHMMPLKDLS------SFNILISGYSSCGEVLAARSIFDKMA----IKD-I 178
G E+A+ LF M +K+ S +F ++ S G V F +M IK +
Sbjct: 292 GFAEEALQLFSKM-MKESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMM 350
Query: 179 VSWNSILSACTRAGDMEKAFALFQEMPMK-NTISWNTMLAGC 219
+ + +++ RAG + +A+ ++MP + + + W T+L+ C
Sbjct: 351 IHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAVVWRTLLSAC 392
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 67/154 (43%), Gaps = 4/154 (2%)
Query: 171 DKMAIKDIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVD 230
D I ++V +S+ + A D+ A L +WN + G E++
Sbjct: 44 DSFIISELVR----VSSLSLAKDLAFARTLLLHSSDSTPSTWNMLSRGYSSSDSPVESIW 99
Query: 231 LFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYA 290
++ EMK P+ LT +L ACA L G +I V + G +V L+ +Y
Sbjct: 100 VYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEVLKHGFDFDVYVGNNLIHLYG 159
Query: 291 KCGSIEQALQIFFKAQVKDIYCWNAIISGLALHG 324
C A ++F + +++ WN+I++ L +G
Sbjct: 160 TCKKTSDARKVFDEMTERNVVSWNSIMTALVENG 193
>AT5G59600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:24011315-24012919 REVERSE
Length = 534
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 148/317 (46%), Gaps = 39/317 (12%)
Query: 29 GNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTIKTGFYRHIFVQ 88
G ++++ + M G + D + P LLKA+ G H +K + F+
Sbjct: 96 GYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIV 155
Query: 89 TALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMPLKDLS 148
++LI+MY GE+ +A +F + +DL
Sbjct: 156 SSLIDMYSKF-------------------------------GEVGNARKVFSDLGEQDLV 184
Query: 149 SFNILISGYSSCGEVLAARSIFDKMAI----KDIVSWNSILSACTRAGDMEKAFALFQEM 204
FN +ISGY++ + A ++ M + D+++WN+++S + + EK + + M
Sbjct: 185 VFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELM 244
Query: 205 PMK----NTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSL 260
+ + +SW ++++G + Q +A D F +M T P+ T ++L AC L +
Sbjct: 245 CLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYM 304
Query: 261 ETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGL 320
+ G +IH Y++ +GL V +AL+DMY KCG I +A+ +F K K +N++I
Sbjct: 305 KHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCY 364
Query: 321 ALHGHGYAALKLFGYMK 337
A HG A++LF M+
Sbjct: 365 ANHGLADKAVELFDQME 381
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 116/263 (44%), Gaps = 31/263 (11%)
Query: 1 MPLLVCNCFMPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAA 60
+ L+ + + P +V W II + E+A + M HG ++ T LL A
Sbjct: 241 LELMCLDGYKP--DVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPAC 298
Query: 61 GKNCASRIGFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWN 120
+ G HG ++ TG H FV++AL++MYG ++A +F P K V +N
Sbjct: 299 TTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFN 358
Query: 121 SMLDAYASNGEMEDAISLFHMMPLKDLSSFNILISGYSSCGEVLAARSIFDKMAIKDIVS 180
SM+ YA++G + A+ LF M + GE L D ++
Sbjct: 359 SMIFCYANHGLADKAVELFDQM---------------EATGEKL------------DHLT 391
Query: 181 WNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQR--GQFSEAVDLFDEMKTT 238
+ +IL+AC+ AG + LF M K I C+ G+ + V+ ++ +K
Sbjct: 392 FTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAM 451
Query: 239 NCLPDYLTATSVLSACAHLGSLE 261
PD ++L+AC + G++E
Sbjct: 452 RMEPDLFVWGALLAACRNHGNME 474
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 80/185 (43%), Gaps = 31/185 (16%)
Query: 153 LISGYSSCGEVLAARSIFDKMAIKDIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISW 212
L++ Y CG+VL AR +FD+M +DI S C
Sbjct: 57 LVTFYVECGKVLDARKVFDEMPKRDI-------SGCV----------------------- 86
Query: 213 NTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIY 272
M+ C + G + E++D F EM D S+L A +L E G IH +
Sbjct: 87 -VMIGACARNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLK 145
Query: 273 SGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKL 332
S + ++L+DMY+K G + A ++F +D+ +NA+ISG A + AL L
Sbjct: 146 FSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNL 205
Query: 333 FGYMK 337
MK
Sbjct: 206 VKDMK 210
>AT5G66500.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:26548076-26549674 REVERSE
Length = 532
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 150/307 (48%), Gaps = 17/307 (5%)
Query: 41 MQVHGFRAD--NYTFPILLKAAGKNCASRIGFAFHGQTIKTGFYRHIFVQTALINMYGTL 98
+Q+H D ++TF +L A G H IK G +TALI+MY
Sbjct: 73 LQIHRASPDLSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGTISKTALIDMYSKY 132
Query: 99 HCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMPLK--DLSSFNILISG 156
D+ ++FE++ KDLV+WN++L + NG+ ++A+ +F M + ++S F L S
Sbjct: 133 GHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEISEFT-LSSV 191
Query: 157 YSSCG--EVLAARSIFDKMAI---KDIVSWNS-ILSACTRAGDMEKAFALFQEMPM-KNT 209
+C ++L M + +D+V + ++S + G + +A ++ + + +
Sbjct: 192 VKTCASLKILQQGKQVHAMVVVTGRDLVVLGTAMISFYSSVGLINEAMKVYNSLNVHTDE 251
Query: 210 ISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVY 269
+ N++++GC++ + EA L + P+ +S L+ C+ L G +IH
Sbjct: 252 VMLNSLISGCIRNRNYKEAFLLMSRQR-----PNVRVLSSSLAGCSDNSDLWIGKQIHCV 306
Query: 270 AIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAA 329
A+ +G S + LMDMY KCG I QA IF K + W ++I A++G G A
Sbjct: 307 ALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKA 366
Query: 330 LKLFGYM 336
L++F M
Sbjct: 367 LEIFREM 373
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 76/139 (54%)
Query: 200 LFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGS 259
LF E+P ++ S N+ L+ L+ G ++ + LF ++ + T T VL AC+ L
Sbjct: 40 LFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPDLSSHTFTPVLGACSLLSY 99
Query: 260 LETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISG 319
ETG ++H I G + TAL+DMY+K G + ++++F + KD+ WNA++SG
Sbjct: 100 PETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSG 159
Query: 320 LALHGHGYAALKLFGYMKK 338
+G G AL +F M +
Sbjct: 160 FLRNGKGKEALGVFAAMYR 178
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 147/332 (44%), Gaps = 41/332 (12%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCAS----RIGFAFH 73
WN ++ + G ++A+ + M +T L + K CAS + G H
Sbjct: 153 WNALLSGFLRNGKGKEALGVFAAMYRERVEISEFT----LSSVVKTCASLKILQQGKQVH 208
Query: 74 GQTIKTGFYRHIFV-QTALINMYGTLHCTADACKMFENMPV-KDLVAWNSMLDAYASNGE 131
+ TG R + V TA+I+ Y ++ +A K++ ++ V D V NS++ N
Sbjct: 209 AMVVVTG--RDLVVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRN 266
Query: 132 MEDAISLFHMMPLKDLSSFNILISGYSSCGE-----------VLAARSIFDKMAIKDIVS 180
++A L + + +L S + C + +A R+ F + D
Sbjct: 267 YKEAFLLMS----RQRPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGF----VSDSKL 318
Query: 181 WNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEM--KTT 238
N ++ + G + +A +F+ +P K+ +SW +M+ G +A+++F EM + +
Sbjct: 319 CNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGS 378
Query: 239 NCLPDYLTATSVLSACAHLGSLETGIKIH--VYAIYSGLASSPHVTTALMDMYAKCGSIE 296
LP+ +T V+SACAH G ++ G + + Y + + H +D+ +K G E
Sbjct: 379 GVLPNSVTFLVVISACAHAGLVKEGKECFGMMKEKYRLVPGTEHY-VCFIDILSKAGETE 437
Query: 297 QALQIFFKAQVKD---IYC--WNAIISGLALH 323
+ ++ + D I C W A++S +L+
Sbjct: 438 EIWRLVERMMENDNQSIPCAIWVAVLSACSLN 469
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 108/223 (48%), Gaps = 12/223 (5%)
Query: 107 MFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMM--PLKDLSSFNIL-------ISGY 157
+F+ +P +DL + NS L ++ +G D ++LF + DLSS + Y
Sbjct: 40 LFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPDLSSHTFTPVLGACSLLSY 99
Query: 158 SSCGEVLAARSIFDKMAIKDIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLA 217
G + A I + A +S +++ ++ G + + +F+ + K+ +SWN +L+
Sbjct: 100 PETGRQVHALMI-KQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLS 158
Query: 218 GCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLAS 277
G L+ G+ EA+ +F M T +SV+ CA L L+ G ++H + +G
Sbjct: 159 GFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTG-RD 217
Query: 278 SPHVTTALMDMYAKCGSIEQALQIFFKAQV-KDIYCWNAIISG 319
+ TA++ Y+ G I +A++++ V D N++ISG
Sbjct: 218 LVVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISG 260
>AT5G52630.1 | Symbols: MEF1 | MEF1 (MITOCHONDRIAL RNA EDITING
FACTOR 1) | chr5:21350375-21352141 FORWARD
Length = 588
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 87/310 (28%), Positives = 155/310 (50%), Gaps = 21/310 (6%)
Query: 41 MQVHGFRADNYTFPILLKAAGKNCA--SR--IGFAFHGQTIKTGFYRHIFVQTALINMYG 96
M R D++ P +A K+CA SR IG + H ++KTG+ +FV ++L++MY
Sbjct: 107 MMAGNLRPDDHVLP----SATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYA 162
Query: 97 TLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMPLKDLS----SFNI 152
A KMF+ MP +++V W+ M+ YA GE E+A+ LF ++L+ SF+
Sbjct: 163 KCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSS 222
Query: 153 LISGYSSCGEVLAARSIFD----KMAIKDIVSWNSILSACTRAGDMEKAFALFQEMPMKN 208
+IS ++ + R I +S++S ++ G E A+ +F E+P+KN
Sbjct: 223 VISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKN 282
Query: 209 TISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHV 268
WN ML Q + ++LF MK + P+++T +VL+AC+H G ++ G
Sbjct: 283 LGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFD 342
Query: 269 YAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIY-CWNAIISGLALHGH-- 325
S + + +L+DM + G +++AL++ + W A+++ +H +
Sbjct: 343 QMKESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLTSCTVHKNTE 402
Query: 326 --GYAALKLF 333
+AA K+F
Sbjct: 403 LAAFAADKVF 412
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 143/294 (48%), Gaps = 16/294 (5%)
Query: 56 LLKAAGKNCASRIGFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKD 115
LL ++ + ++ G HG +K+G V LIN Y D+ + FE+ P K
Sbjct: 21 LLLSSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKS 80
Query: 116 LVAWNSMLDAYASNGEMEDAISLFHMMPLKDLSSFN-ILISGYSSCG-----------EV 163
W+S++ +A N ++ M +L + +L S SC
Sbjct: 81 STTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHC 140
Query: 164 LAARSIFDKMAIKDIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRG 223
L+ ++ +D D+ +S++ + G++ A +F EMP +N ++W+ M+ G Q G
Sbjct: 141 LSMKTGYDA----DVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMG 196
Query: 224 QFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTT 283
+ EA+ LF E N + + +SV+S CA+ LE G +IH +I S SS V +
Sbjct: 197 ENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGS 256
Query: 284 ALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMK 337
+L+ +Y+KCG E A Q+F + VK++ WNA++ A H H ++LF MK
Sbjct: 257 SLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMK 310
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 102/219 (46%), Gaps = 9/219 (4%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
MP V W+ ++ + +G E+A+ + ++Y+F ++ + +G
Sbjct: 177 MPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELG 236
Query: 70 FAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASN 129
HG +IK+ F FV ++L+++Y A ++F +PVK+L WN+ML AYA +
Sbjct: 237 RQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQH 296
Query: 130 GEMEDAISLFHMMPLKDLS----SFNILISGYSSCGEVLAARSIFDKMAIKDIVS----W 181
+ I LF M L + +F +++ S G V R FD+M I +
Sbjct: 297 SHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQMKESRIEPTDKHY 356
Query: 182 NSILSACTRAGDMEKAFALFQEMPMKNTIS-WNTMLAGC 219
S++ RAG +++A + MP+ T S W +L C
Sbjct: 357 ASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLTSC 395
>AT2G37320.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15667223-15668725 FORWARD
Length = 500
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 153/303 (50%), Gaps = 12/303 (3%)
Query: 40 NMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTIKTGFYRHIFVQTALINMYGTLH 99
+++ G+ D Y +++ G N R G FH +K GF +++ ++L+ +Y
Sbjct: 110 SVKRDGWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSG 169
Query: 100 CTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMPLKDLS-----SFNILI 154
+A K+FE MP +++V+W +M+ +A ++ + L+ M K S +F L+
Sbjct: 170 EVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMR-KSTSDPNDYTFTALL 228
Query: 155 SGYSSCGEVLAARSIFDKMAIKDIVSW----NSILSACTRAGDMEKAFALFQEMPMKNTI 210
S + G + RS+ + + S+ NS++S + GD++ AF +F + K+ +
Sbjct: 229 SACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVV 288
Query: 211 SWNTMLAGCLQRGQFSEAVDLFD-EMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVY 269
SWN+M+AG Q G +A++LF+ M + PD +T VLS+C H G ++ G K
Sbjct: 289 SWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNL 348
Query: 270 AIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVK-DIYCWNAIISGLALHGHGYA 328
GL + + L+D+ + G +++AL++ +K + W +++ +HG +
Sbjct: 349 MAEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDVWT 408
Query: 329 ALK 331
++
Sbjct: 409 GIR 411
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 96/162 (59%)
Query: 175 IKDIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDE 234
I D+ +S++ +G++E A+ +F+EMP +N +SW M++G Q + + L+ +
Sbjct: 152 ISDVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSK 211
Query: 235 MKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGS 294
M+ + P+ T T++LSAC G+L G +H ++ GL S H++ +L+ MY KCG
Sbjct: 212 MRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGD 271
Query: 295 IEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYM 336
++ A +IF + KD+ WN++I+G A HG A++LF M
Sbjct: 272 LKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELM 313
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 104/225 (46%), Gaps = 10/225 (4%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
MP V W +I + + Y M+ ++YTF LL A + A G
Sbjct: 181 MPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQG 240
Query: 70 FAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASN 129
+ H QT+ G ++ + +LI+MY DA ++F+ KD+V+WNSM+ YA +
Sbjct: 241 RSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQH 300
Query: 130 GEMEDAISLFHMMPLK-----DLSSFNILISGYSSCGEVLAARSIFDKMA----IKDIVS 180
G AI LF +M K D ++ ++S G V R F+ MA ++
Sbjct: 301 GLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPELNH 360
Query: 181 WNSILSACTRAGDMEKAFALFQEMPMK-NTISWNTMLAGCLQRGQ 224
++ ++ R G +++A L + MPMK N++ W ++L C G
Sbjct: 361 YSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGD 405
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 46/96 (47%)
Query: 243 DYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIF 302
D +S + +C TG H A+ G S ++ ++L+ +Y G +E A ++F
Sbjct: 119 DAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVF 178
Query: 303 FKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMKK 338
+ +++ W A+ISG A LKL+ M+K
Sbjct: 179 EEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRK 214
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE
Length = 895
Score = 121 bits (303), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 156/323 (48%), Gaps = 10/323 (3%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
+P+ V W ++ + +A A+ + M+ G +N T ++ A G+
Sbjct: 311 IPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEA 370
Query: 70 FAFHGQTIKTGFYRHIFVQTALINMY---GTLHCTADACKMFENMPVKDLVAWNSMLDAY 126
H K+GFY V ALI+MY G + + + +++ +++V N M+ ++
Sbjct: 371 SQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMITSF 428
Query: 127 ASNGEMEDAISLFHMMPLKDLSSFNILISGYSSCGEVLAARSIFDKMAIK-----DIVSW 181
+ + + AI LF M + L + + S + L +K D+
Sbjct: 429 SQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNLGKQVHGYTLKSGLVLDLTVG 488
Query: 182 NSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCL 241
+S+ + ++ G +E+++ LFQ +P K+ W +M++G + G EA+ LF EM
Sbjct: 489 SSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTS 548
Query: 242 PDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQI 301
PD T +VL+ C+ SL G +IH Y + +G+ + +AL++MY+KCGS++ A Q+
Sbjct: 549 PDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQV 608
Query: 302 FFKAQVKDIYCWNAIISGLALHG 324
+ + D +++ISG + HG
Sbjct: 609 YDRLPELDPVSCSSLISGYSQHG 631
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 151/314 (48%), Gaps = 11/314 (3%)
Query: 33 QAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTIKTGFYRHIFVQTALI 92
+A+ + M G R D ++ LL +C + +G HG T+K+G + V ++L
Sbjct: 436 KAIRLFTRMLQEGLRTDEFSVCSLLSVL--DCLN-LGKQVHGYTLKSGLVLDLTVGSSLF 492
Query: 93 NMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMM----PLKDLS 148
+Y ++ K+F+ +P KD W SM+ + G + +AI LF M D S
Sbjct: 493 TLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDES 552
Query: 149 SFNILISGYSSCGEVLAARSIFD---KMAI-KDIVSWNSILSACTRAGDMEKAFALFQEM 204
+ +++ SS + + I + I K + +++++ ++ G ++ A ++ +
Sbjct: 553 TLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRL 612
Query: 205 PMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGI 264
P + +S +++++G Q G + LF +M + D +S+L A A G
Sbjct: 613 PELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGA 672
Query: 265 KIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHG 324
++H Y GL + P V ++L+ MY+K GSI+ + F + D+ W A+I+ A HG
Sbjct: 673 QVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHG 732
Query: 325 HGYAALKLFGYMKK 338
AL+++ MK+
Sbjct: 733 KANEALQVYNLMKE 746
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 126/267 (47%), Gaps = 21/267 (7%)
Query: 85 IFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMPL 144
+F+ +L++ Y ADA K+F+ +P D+V+ N M+ Y + E+++ F M
Sbjct: 84 VFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMHF 143
Query: 145 KDLSSFNILISGYSSCGEVLAARSIFDKMAIKDIVSWNSI--------------LSACTR 190
+ I S G V++A S ++V ++I + ++
Sbjct: 144 LGFEANEI------SYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSK 197
Query: 191 AGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSV 250
E A+ +F++ N WNT++AG L+ + DLF EM PD T +SV
Sbjct: 198 NLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSV 257
Query: 251 LSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDI 310
L+ACA L L G + I G A V TA++D+YAKCG + +A+++F + +
Sbjct: 258 LAACASLEKLRFGKVVQARVIKCG-AEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSV 316
Query: 311 YCWNAIISGLALHGHGYAALKLFGYMK 337
W ++SG ++AL++F M+
Sbjct: 317 VSWTVMLSGYTKSNDAFSALEIFKEMR 343
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 85/342 (24%), Positives = 157/342 (45%), Gaps = 22/342 (6%)
Query: 10 MPSLEVRRWNEII---KKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCAS 66
+P +V N +I K+H L E+++ + M GF A+ ++ ++ A A
Sbjct: 110 IPQPDVVSCNIMISGYKQHRLF---EESLRFFSKMHFLGFEANEISYGSVISACSALQAP 166
Query: 67 RIGFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAY 126
TIK G++ + V++ALI+++ DA K+F + ++ WN+++
Sbjct: 167 LFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGA 226
Query: 127 ASNGEMEDAISLFHMMPL----KDLSSFNILISGYSSC-----GEVLAARSIFDKMAIKD 177
N LFH M + D +++ +++ +S G+V+ AR I K +D
Sbjct: 227 LRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVI--KCGAED 284
Query: 178 IVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKT 237
+ +I+ + G M +A +F +P + +SW ML+G + A+++F EM+
Sbjct: 285 VFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRH 344
Query: 238 TNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQ 297
+ + T TSV+SAC + ++H + SG V AL+ MY+K G I+
Sbjct: 345 SGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDL 404
Query: 298 ALQIFFKAQVKDIYCWNAI---ISGLALHGHGYAALKLFGYM 336
+ Q+F + DI N + I+ + A++LF M
Sbjct: 405 SEQVF--EDLDDIQRQNIVNVMITSFSQSKKPGKAIRLFTRM 444
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 141/320 (44%), Gaps = 14/320 (4%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTI 77
W +I G +A+ + M G D T +L + + G HG T+
Sbjct: 519 WASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTL 578
Query: 78 KTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAIS 137
+ G + + + +AL+NMY A ++++ +P D V+ +S++ Y+ +G ++D
Sbjct: 579 RAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFL 638
Query: 138 LFHMMPLK--DLSSFNI-------LISGYSSCGEVLAARSIFDKMAIKDIVSWNSILSAC 188
LF M + + SF I +S SS G + A + + V +S+L+
Sbjct: 639 LFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVG-SSLLTMY 697
Query: 189 TRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTAT 248
++ G ++ F ++ + I+W ++A Q G+ +EA+ +++ MK PD +T
Sbjct: 698 SKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFV 757
Query: 249 SVLSACAHLGSLETGIKIHVYAIYSGLASSPHVT--TALMDMYAKCGSIEQALQIFFKAQ 306
VLSAC+H G +E H+ ++ P ++D + G + +A
Sbjct: 758 GVLSACSHGGLVEESY-FHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMH 816
Query: 307 VK-DIYCWNAIISGLALHGH 325
+K D W +++ +HG
Sbjct: 817 IKPDALVWGTLLAACKIHGE 836
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 107/259 (41%), Gaps = 35/259 (13%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
+P L+ + +I + G + L + +M + GF D++ +LKAA + S +G
Sbjct: 612 LPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLG 671
Query: 70 FAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASN 129
H K G V ++L+ MY D CK F + DL+AW +++ +YA +
Sbjct: 672 AQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQH 731
Query: 130 GEMEDAISLFHMMPLKDLSSFNILISGYSSCGEVLAARSIFDKMAIKDIVSWNSILSACT 189
G+ +A+ ++++M K D V++ +LSAC+
Sbjct: 732 GKANEALQVYNLMKEKGFK---------------------------PDKVTFVGVLSACS 764
Query: 190 RAGDMEKAFALFQEMPMKNTISWNTMLAGCL-----QRGQFSEAVDLFDEMKTTNCLPDY 244
G +E+++ M I C+ + G+ EA + M PD
Sbjct: 765 HGGLVEESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIK---PDA 821
Query: 245 LTATSVLSACAHLGSLETG 263
L ++L+AC G +E G
Sbjct: 822 LVWGTLLAACKIHGEVELG 840
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 79/161 (49%), Gaps = 7/161 (4%)
Query: 170 FDKMAIKDIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAV 229
FD K ++SW S +G M A LF +P + +S N M++G Q F E++
Sbjct: 82 FDVFLTKSLLSWYS------NSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESL 135
Query: 230 DLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMY 289
F +M + ++ SV+SAC+ L + + + I G V +AL+D++
Sbjct: 136 RFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVF 195
Query: 290 AKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAAL 330
+K E A ++F + ++YCWN II+G AL Y A+
Sbjct: 196 SKNLRFEDAYKVFRDSLSANVYCWNTIIAG-ALRNQNYGAV 235
>AT1G22830.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:8076921-8079032 FORWARD
Length = 703
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/372 (25%), Positives = 173/372 (46%), Gaps = 56/372 (15%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAF----H 73
WN +I ++ +++V Y M G RAD +T+P ++KA CA+ + FA+ H
Sbjct: 152 WNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKA----CAALLDFAYGRVVH 207
Query: 74 GQTIKTGFYR-HIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEM 132
G +I+ +R +++V ALI+MY A ++F+ M +D V+WN++++ Y S ++
Sbjct: 208 G-SIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKL 266
Query: 133 EDAISLFHMMPLKDLSSFNI------------------------------------LISG 156
+A L M L + + + +I+G
Sbjct: 267 GEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMING 326
Query: 157 YSSCGEVLAAR--SIFDKMAIK------DIVS-WNSILSACTRAGDMEKAFALFQEMPMK 207
+C + A + +F + I+ DI + NS+++ +R D+ AF +FQ++
Sbjct: 327 LKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEAN 386
Query: 208 NTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIH 267
+ +WN++++G + E L EM + P+++T S+L A +G+L+ G + H
Sbjct: 387 SLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFH 446
Query: 268 VYAIYSGLASSPHVT-TALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHG 326
Y + + +L+DMYAK G I A ++F + +D + ++I G G G
Sbjct: 447 CYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKG 506
Query: 327 YAALKLFGYMKK 338
AL F M +
Sbjct: 507 EVALAWFKDMDR 518
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 135/301 (44%), Gaps = 20/301 (6%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTI 77
WN I + GN A+ V M+ R + LKA A + G FH I
Sbjct: 288 WNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVI 347
Query: 78 KTGFYRHIF--VQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDA 135
++ + H V+ +LI MY A +F+ + L WNS++ +A N E+
Sbjct: 348 RSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEET 407
Query: 136 ISLFHMMPLKDLSSFNILISG----YSSCGEVLAARS----IFDKMAIKD-IVSWNSILS 186
L M L +I ++ ++ G + + I + + KD ++ WNS++
Sbjct: 408 SFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVD 467
Query: 187 ACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLT 246
++G++ A +F M ++ +++ +++ G + G+ A+ F +M + PD++T
Sbjct: 468 MYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVT 527
Query: 247 ATSVLSACAHLGSLETGIKI-----HVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQI 301
+VLSAC+H + G + HV+ I L + ++D+Y + G +++A I
Sbjct: 528 MVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEH----YSCMVDLYCRAGYLDKARDI 583
Query: 302 F 302
F
Sbjct: 584 F 584
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 76/169 (44%), Gaps = 6/169 (3%)
Query: 150 FNILISGYSSCGEVLAARSIFDKMAIKDIVSWNSILSACTRAGDMEKAFALFQEMPMKNT 209
FN + G +++ FD + + +V++ S + A + + + +P
Sbjct: 96 FNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLP---- 151
Query: 210 ISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVY 269
WN ++ ++ +F E+V ++ M + D T SV+ ACA L G +H
Sbjct: 152 --WNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGS 209
Query: 270 AIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIIS 318
S + +V AL+ MY + G ++ A ++F + +D WNAII+
Sbjct: 210 IEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIIN 258
>AT1G22830.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:8076921-8079032 FORWARD
Length = 703
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/372 (25%), Positives = 173/372 (46%), Gaps = 56/372 (15%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAF----H 73
WN +I ++ +++V Y M G RAD +T+P ++KA CA+ + FA+ H
Sbjct: 152 WNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKA----CAALLDFAYGRVVH 207
Query: 74 GQTIKTGFYR-HIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEM 132
G +I+ +R +++V ALI+MY A ++F+ M +D V+WN++++ Y S ++
Sbjct: 208 G-SIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKL 266
Query: 133 EDAISLFHMMPLKDLSSFNI------------------------------------LISG 156
+A L M L + + + +I+G
Sbjct: 267 GEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMING 326
Query: 157 YSSCGEVLAAR--SIFDKMAIK------DIVS-WNSILSACTRAGDMEKAFALFQEMPMK 207
+C + A + +F + I+ DI + NS+++ +R D+ AF +FQ++
Sbjct: 327 LKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEAN 386
Query: 208 NTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIH 267
+ +WN++++G + E L EM + P+++T S+L A +G+L+ G + H
Sbjct: 387 SLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFH 446
Query: 268 VYAIYSGLASSPHVT-TALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHG 326
Y + + +L+DMYAK G I A ++F + +D + ++I G G G
Sbjct: 447 CYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKG 506
Query: 327 YAALKLFGYMKK 338
AL F M +
Sbjct: 507 EVALAWFKDMDR 518
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 135/301 (44%), Gaps = 20/301 (6%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTI 77
WN I + GN A+ V M+ R + LKA A + G FH I
Sbjct: 288 WNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVI 347
Query: 78 KTGFYRHIF--VQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDA 135
++ + H V+ +LI MY A +F+ + L WNS++ +A N E+
Sbjct: 348 RSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEET 407
Query: 136 ISLFHMMPLKDLSSFNILISG----YSSCGEVLAARS----IFDKMAIKD-IVSWNSILS 186
L M L +I ++ ++ G + + I + + KD ++ WNS++
Sbjct: 408 SFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVD 467
Query: 187 ACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLT 246
++G++ A +F M ++ +++ +++ G + G+ A+ F +M + PD++T
Sbjct: 468 MYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVT 527
Query: 247 ATSVLSACAHLGSLETGIKI-----HVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQI 301
+VLSAC+H + G + HV+ I L + ++D+Y + G +++A I
Sbjct: 528 MVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEH----YSCMVDLYCRAGYLDKARDI 583
Query: 302 F 302
F
Sbjct: 584 F 584
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 76/169 (44%), Gaps = 6/169 (3%)
Query: 150 FNILISGYSSCGEVLAARSIFDKMAIKDIVSWNSILSACTRAGDMEKAFALFQEMPMKNT 209
FN + G +++ FD + + +V++ S + A + + + +P
Sbjct: 96 FNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLP---- 151
Query: 210 ISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVY 269
WN ++ ++ +F E+V ++ M + D T SV+ ACA L G +H
Sbjct: 152 --WNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGS 209
Query: 270 AIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIIS 318
S + +V AL+ MY + G ++ A ++F + +D WNAII+
Sbjct: 210 IEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIIN 258
>AT4G15720.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:8949569-8951419 FORWARD
Length = 616
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 138/278 (49%), Gaps = 13/278 (4%)
Query: 72 FHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGE 131
H T+K GF F L+ Y L A K+F+ M ++V+W S++ Y G+
Sbjct: 51 LHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGK 110
Query: 132 MEDAISLFHMM----PLK-DLSSFNILISGYSSCGEVLAARSIFDKMAI----KDIVSWN 182
++A+S+F M P+ + +F + S+ E ++I ++ I ++IV +
Sbjct: 111 PQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSS 170
Query: 183 SILSACTRAGDMEKAFALFQEMPM--KNTISWNTMLAGCLQRGQFSEAVDLFDEMKT--T 238
S++ + D+E A +F M +N +SW +M+ Q + EA++LF T
Sbjct: 171 SLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALT 230
Query: 239 NCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQA 298
+ + SV+SAC+ LG L+ G H G S+ V T+L+DMYAKCGS+ A
Sbjct: 231 SDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCA 290
Query: 299 LQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYM 336
+IF + + + + ++I A HG G AA+KLF M
Sbjct: 291 EKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEM 328
Score = 111 bits (277), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 154/329 (46%), Gaps = 25/329 (7%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNM-QVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQT 76
W +I + +G + A+ + M + + YTF + KA SRIG H +
Sbjct: 98 WTSVISGYNDMGKPQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARL 157
Query: 77 IKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPV--KDLVAWNSMLDAYASNGEMED 134
+G R+I V ++L++MYG + A ++F++M +++V+W SM+ AYA N +
Sbjct: 158 EISGLRRNIVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHE 217
Query: 135 AISLFHMMP---LKDLSSFNILISGYSSC--------GEV---LAARSIFDKMAIKDIVS 180
AI LF D ++ +L S S+C G+V L R ++ + V
Sbjct: 218 AIELFRSFNAALTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYES----NTVV 273
Query: 181 WNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNC 240
S+L + G + A +F + + IS+ +M+ + G AV LFDEM
Sbjct: 274 ATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRI 333
Query: 241 LPDYLTATSVLSACAHLGSLETGIK-IHVYAIYSGLASSPHVTTALMDMYAKCGSIEQAL 299
P+Y+T VL AC+H G + G++ + + A G+ T ++DM + G +++A
Sbjct: 334 NPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAY 393
Query: 300 QIFFKAQV---KDIYCWNAIISGLALHGH 325
++ +V + W A++S LHG
Sbjct: 394 ELAKTIEVGAEQGALLWGALLSAGRLHGR 422
>AT4G32430.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:15652982-15655273 FORWARD
Length = 763
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 154/330 (46%), Gaps = 19/330 (5%)
Query: 14 EVRRWNEIIKKHMLVGNAEQAVLTYV-NMQVHGFRADNYTFPILLKAAGKNCASRIGFAF 72
+V WN I+ + Q L +V M+ G D +T+ L + +G
Sbjct: 141 DVVSWNTILSGF----DDNQIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQL 196
Query: 73 HGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEM 132
+KTG + V + I MY A ++F+ M KD+++WNS+L + G
Sbjct: 197 QSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTF 256
Query: 133 E-DAISLFHMMPLK----DLSSFNILISGYSSCGEVLAARSIFD---KMAIKDIVSWNSI 184
+A+ +F M + D SF +I+ ++ AR I K + ++ +I
Sbjct: 257 GFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNI 316
Query: 185 L-SACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPD 243
L S ++ G +E ++F +M +N +SW TM++ +AV +F M+ P+
Sbjct: 317 LMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISS-----NKDDAVSIFLNMRFDGVYPN 371
Query: 244 YLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFF 303
+T +++A ++ G+KIH I +G S P V + + +YAK ++E A + F
Sbjct: 372 EVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFE 431
Query: 304 KAQVKDIYCWNAIISGLALHGHGYAALKLF 333
++I WNA+ISG A +G + ALK+F
Sbjct: 432 DITFREIISWNAMISGFAQNGFSHEALKMF 461
Score = 117 bits (294), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 143/295 (48%), Gaps = 28/295 (9%)
Query: 26 MLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTIKTGFYRHI 85
M+ N + AV ++NM+ G + TF L+ A N + G HG IKTGF
Sbjct: 348 MISSNKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEP 407
Query: 86 FVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMPLK 145
V + I +Y DA K FE++ +++++WN+M+ +A NG +A+ +F
Sbjct: 408 SVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMF------ 461
Query: 146 DLSSFNILISGYSSCGEVLAARSIFDKMAIKD-----------------IVSWNSILSAC 188
LS+ + + G VL A + + +++K +VS +++L
Sbjct: 462 -LSAAAETMPNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVS-SALLDMY 519
Query: 189 TRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTAT 248
+ G+++++ +F EM KN W ++++ G F ++LF +M N PD +T
Sbjct: 520 AKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFL 579
Query: 249 SVLSACAHLGSLETGIKIH--VYAIYSGLASSPHVTTALMDMYAKCGSIEQALQI 301
SVL+AC G ++ G +I + +Y+ S H + ++DM + G +++A ++
Sbjct: 580 SVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHY-SCMVDMLGRAGRLKEAEEL 633
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 146/316 (46%), Gaps = 16/316 (5%)
Query: 33 QAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTIKTGFYRHIFVQTALI 92
+AV+ + +M G D+ +F ++ ++ HG IK G+ + V L+
Sbjct: 259 EAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILM 318
Query: 93 NMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMPLKDLSSFNI 152
+ Y +F M +++V+W +M+ + +DA+S+F M + +
Sbjct: 319 SRYSKCGVLEAVKSVFHQMSERNVVSWTTMISS-----NKDDAVSIFLNMRFDGVYPNEV 373
Query: 153 LISGY---SSCGEVLAARSIFDKMAIK-----DIVSWNSILSACTRAGDMEKAFALFQEM 204
G C E + + IK + NS ++ + +E A F+++
Sbjct: 374 TFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDI 433
Query: 205 PMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLG--SLET 262
+ ISWN M++G Q G EA+ +F +P+ T SVL+A A S++
Sbjct: 434 TFREIISWNAMISGFAQNGFSHEALKMFLS-AAAETMPNEYTFGSVLNAIAFAEDISVKQ 492
Query: 263 GIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLAL 322
G + H + + GL S P V++AL+DMYAK G+I+++ ++F + K+ + W +IIS +
Sbjct: 493 GQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSS 552
Query: 323 HGHGYAALKLFGYMKK 338
HG + LF M K
Sbjct: 553 HGDFETVMNLFHKMIK 568
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 59/128 (46%), Gaps = 6/128 (4%)
Query: 197 AFALFQEMPMKN-TISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLP---DYLTATSVLS 252
A LF +N T S N ++ L+R + A+ +F E D +T L
Sbjct: 27 AHKLFDGSSQRNATTSINHSISESLRRNSPARALSIFKENLQLGYFGRHMDEVTLCLALK 86
Query: 253 ACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYC 312
AC G L+ G +IH ++ SG S V+ A+M MY K G + AL IF D+
Sbjct: 87 ACR--GDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVS 144
Query: 313 WNAIISGL 320
WN I+SG
Sbjct: 145 WNTILSGF 152
>AT5G39680.1 | Symbols: EMB2744 | EMB2744 (EMBRYO DEFECTIVE 2744) |
chr5:15884236-15886368 REVERSE
Length = 710
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/340 (25%), Positives = 153/340 (45%), Gaps = 15/340 (4%)
Query: 9 FMPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHG-FRADNYTFPILLKAAGKNCASR 67
MP V W ++K + G + + + +M G R + + ++ K+ +
Sbjct: 94 LMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIE 153
Query: 68 IGFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYA 127
G FHG +K G H FV+ L+ MY +A ++ +++P DL ++S L Y
Sbjct: 154 EGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYL 213
Query: 128 SNGEMEDAISLFHMMPLKDLSSFNIL----ISGYSSCGEVLAARSIFDKMAIKDIVSWNS 183
G ++ + + +D N+ + +S+ ++ A + +M +N+
Sbjct: 214 ECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVR---FGFNA 270
Query: 184 ILSACT-------RAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMK 236
+ AC + G + A +F + +N T++ Q F EA++LF +M
Sbjct: 271 EVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMD 330
Query: 237 TTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIE 296
T P+ T +L++ A L L+ G +H + SG + V AL++MYAK GSIE
Sbjct: 331 TKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIE 390
Query: 297 QALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYM 336
A + F +DI WN +ISG + HG G AL+ F M
Sbjct: 391 DARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRM 430
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 130/264 (49%), Gaps = 14/264 (5%)
Query: 68 IGFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYA 127
+ H + ++ GF + ALINMYG A ++F++ +++ +++DAY
Sbjct: 255 LALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYF 314
Query: 128 SNGEMEDAISLFHMMPLKDLS----SFNILISGYSSCGEVLAARSIFDKMAIKD-----I 178
+ E+A++LF M K++ +F IL++ + +L + + +K +
Sbjct: 315 QDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELS-LLKQGDLLHGLVLKSGYRNHV 373
Query: 179 VSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTT 238
+ N++++ ++G +E A F M ++ ++WNTM++GC G EA++ FD M T
Sbjct: 374 MVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFT 433
Query: 239 NCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVT--TALMDMYAKCGSIE 296
+P+ +T VL AC+H+G +E G+ + + P + T ++ + +K G +
Sbjct: 434 GEIPNRITFIGVLQACSHIGFVEQGLH-YFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFK 492
Query: 297 QALQIFFKAQVK-DIYCWNAIISG 319
A A ++ D+ W +++
Sbjct: 493 DAEDFMRTAPIEWDVVAWRTLLNA 516
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/325 (23%), Positives = 142/325 (43%), Gaps = 23/325 (7%)
Query: 32 EQAVLTYVNMQVHGFRADNYTFPI-----LLKAAGKNCASRIGFAFHGQTI---KTGFYR 83
EQ +L + + ++ FPI LLK + RIG + H I ++
Sbjct: 8 EQRLLKWDKLASLVPKSKKTPFPIDRLNELLKVCANSSYLRIGESIHAHLIVTNQSSRAE 67
Query: 84 HIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMP 143
+ +LIN+Y T A K+F+ MP +++V+W +M+ Y ++G + + LF M
Sbjct: 68 DAYQINSLINLYVKCRETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMF 127
Query: 144 LKDLSSFNILISG--YSSC---GEVLAARSIFDKMAIKDIVS----WNSIL---SACTRA 191
S N ++ + SC G + + ++S N+++ S C+
Sbjct: 128 FSGESRPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGN 187
Query: 192 GDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVL 251
G+ A + ++P + +++ L+G L+ G F E +D+ + + + + LT S L
Sbjct: 188 GE---AIRVLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSL 244
Query: 252 SACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIY 311
++L L +++H + G + AL++MY KCG + A ++F ++I+
Sbjct: 245 RLFSNLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIF 304
Query: 312 CWNAIISGLALHGHGYAALKLFGYM 336
I+ AL LF M
Sbjct: 305 LNTTIMDAYFQDKSFEEALNLFSKM 329
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 118/279 (42%), Gaps = 44/279 (15%)
Query: 32 EQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTIKTGFYRHIFVQTAL 91
E+A+ + M + YTF ILL + + + G HG +K+G+ H+ V AL
Sbjct: 320 EEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNAL 379
Query: 92 INMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMPLKDLSSFN 151
+NMY A +G +EDA F M +D+ ++N
Sbjct: 380 VNMY-------------------------------AKSGSIEDARKAFSGMTFRDIVTWN 408
Query: 152 ILISGYSSCGEVLAARSIFDKM----AIKDIVSWNSILSACTRAGDMEKAFALFQEM--- 204
+ISG S G A FD+M I + +++ +L AC+ G +E+ F ++
Sbjct: 409 TMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKK 468
Query: 205 -PMKNTISWNTMLAGCLQR-GQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLET 262
++ I T + G L + G F +A D M+T D + ++L+AC +
Sbjct: 469 FDVQPDIQHYTCIVGLLSKAGMFKDAEDF---MRTAPIEWDVVAWRTLLNACYVRRNYRL 525
Query: 263 GIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQI 301
G K+ YAI + V L +++AK E ++
Sbjct: 526 GKKVAEYAI-EKYPNDSGVYVLLSNIHAKSREWEGVAKV 563
>AT4G19220.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:10505266-10508121 REVERSE
Length = 932
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/231 (31%), Positives = 116/231 (50%), Gaps = 14/231 (6%)
Query: 113 VKDLVAWNSMLDAYASNGEMEDAISLFHMMPLK-----DLSSFNILISGYSSCGEVLAAR 167
+DL +WNS++ AS+G +++ F M + DL + IS + G VL R
Sbjct: 542 TRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGR 601
Query: 168 SIFDKMAIK-----DIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQR 222
F +AIK D N++++ R D+E A +F + N SWN +++ Q
Sbjct: 602 -CFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQN 660
Query: 223 GQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVT 282
E LF +K P+ +T +LSA LGS G++ H + I G ++P V+
Sbjct: 661 KAGREVFQLFRNLKLE---PNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVS 717
Query: 283 TALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLF 333
AL+DMY+ CG +E +++F + V I WN++IS HG G A++LF
Sbjct: 718 AALVDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELF 768
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/347 (27%), Positives = 158/347 (45%), Gaps = 17/347 (4%)
Query: 3 LLVCNCFMPSL---EVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKA 59
L+ +C L +V WN +I G AV ++ M G D+ T + A
Sbjct: 138 LVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEMIHKGNEFDSTTLLLAASA 197
Query: 60 AGKNCASRIGFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAW 119
SR H I+TG + AL+N+Y + A +F +M +D+V+W
Sbjct: 198 LSSLHLSRKCSMLHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSW 257
Query: 120 NSMLDAYASNGEMEDAISLFHMMP----LKDLSSFNILISGYSSCGEVLAARSIFDKMAI 175
N+++ +NG ++ F M D +F+ +IS SS E+ S+ + I
Sbjct: 258 NTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHG-LVI 316
Query: 176 KD-------IVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEA 228
K + NSI+S ++ GD E A +F+E+ ++ IS N +L G G F EA
Sbjct: 317 KSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEA 376
Query: 229 VDLFDEMKTTNCL-PDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSP-HVTTALM 286
+ ++M++ + + PD T S+ S C L G +H Y + + S V +++
Sbjct: 377 FGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVI 436
Query: 287 DMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLF 333
DMY KCG QA +F +D+ WN++IS + +G + A LF
Sbjct: 437 DMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLF 483
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 97/426 (22%), Positives = 166/426 (38%), Gaps = 98/426 (23%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
M ++ WN I+ K + G+ +++ + +M G AD TF ++ A +G
Sbjct: 249 MEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLG 308
Query: 70 FAFHGQTIKTGF--YRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYA 127
+ HG IK+G+ H+ V ++I+MY T A +FE + +D+++ N++L+ +A
Sbjct: 309 ESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFA 368
Query: 128 SNGEMEDAISLFHMMPLKD----------------------------------------- 146
+NG E+A + + M D
Sbjct: 369 ANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRA 428
Query: 147 LSSFNILISGYSSCGEVLAARSIFDKMAIKDIVSWNS----------------------- 183
L N +I Y CG A +F +D+VSWNS
Sbjct: 429 LEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVS 488
Query: 184 --------------ILSAC----------------TRAGDMEKAFALFQEM-PMKNTISW 212
IL++C + GD+ AF + M ++ SW
Sbjct: 489 EYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQKLGDLTSAFLRLETMSETRDLTSW 548
Query: 213 NTMLAGCLQRGQFSEAVDLFDEM-KTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAI 271
N++++GC G E++ F M + D +T +SA +LG + G H AI
Sbjct: 549 NSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAI 608
Query: 272 YSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALK 331
S + L+ MY +C IE A+++F ++ WN +IS L+ + G +
Sbjct: 609 KSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQ 668
Query: 332 LFGYMK 337
LF +K
Sbjct: 669 LFRNLK 674
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 129/278 (46%), Gaps = 12/278 (4%)
Query: 71 AFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNG 130
+ H +K G + + + L+ YG + +F+ + KD++ WNSM+ A NG
Sbjct: 108 SVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNG 167
Query: 131 EMEDAISLFHMMPLKDLSSFNILISGYSSCGEVLAAR----SIFDKMAIK-----DIVSW 181
A+ LF M K + F+ ++ S+ +AI+ D
Sbjct: 168 RYIAAVGLFIEMIHKG-NEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLC 226
Query: 182 NSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCL 241
N++++ + ++ A +F M ++ +SWNT++ CL G +++ F M +
Sbjct: 227 NALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQE 286
Query: 242 PDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVT--TALMDMYAKCGSIEQAL 299
D +T + V+SAC+ + L G +H I SG + HV+ +++ MY+KCG E A
Sbjct: 287 ADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAE 346
Query: 300 QIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMK 337
+F + +D+ NAI++G A +G A + M+
Sbjct: 347 TVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQ 384
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 138/321 (42%), Gaps = 11/321 (3%)
Query: 14 EVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHG-FRADNYTFPILLKAAGKNCASRIGFAF 72
++ WN +I G+ +++ + M G R D T + A+G G F
Sbjct: 544 DLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCF 603
Query: 73 HGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEM 132
HG IK+ +Q LI MYG A K+F + +L +WN ++ A + N
Sbjct: 604 HGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAG 663
Query: 133 EDAISLFHMMPLK-DLSSFNILISGYSSCGEVLAARSIFDKMAIKDIVSWNSILSAC--- 188
+ LF + L+ + +F L+S + G + I+ N +SA
Sbjct: 664 REVFQLFRNLKLEPNEITFVGLLSASTQLGSTSYGMQAHCHL-IRRGFQANPFVSAALVD 722
Query: 189 --TRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCL-PDYL 245
+ G +E +F+ + + +WN++++ G +A++LF E+ + + + P+
Sbjct: 723 MYSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKS 782
Query: 246 TATSVLSACAHLGSLETGIKIHVYAIYS-GLASSPHVTTALMDMYAKCGSIEQALQ-IFF 303
+ S+LSAC+H G ++ G+ + G+ ++DM + G + +A + I
Sbjct: 783 SFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYEFITG 842
Query: 304 KAQVKDIYCWNAIISGLALHG 324
+ + W A++S HG
Sbjct: 843 IGEPQKAGVWGALLSACNYHG 863
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 103/241 (42%), Gaps = 27/241 (11%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTI 77
WN +I + + N+++ + TF LL A+ + ++ G H I
Sbjct: 650 WNCVISALSQNKAGREVFQLFRNLKLE---PNEITFVGLLSASTQLGSTSYGMQAHCHLI 706
Query: 78 KTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAIS 137
+ GF + FV AL++MY + K+F N V + AWNS++ A+ +G E A+
Sbjct: 707 RRGFQANPFVSAALVDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAME 766
Query: 138 LF-------HMMPLKDLSSFNILISGYSSCGEVLAARSIF----DKMAIKDIVS---WNS 183
LF M P K SSF L+S S G + S + +K +K + W
Sbjct: 767 LFKELSSNSEMEPNK--SSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVW-- 822
Query: 184 ILSACTRAGDMEKAFALFQEM--PMKNTISWNTMLAGCLQRGQF---SEAVDLFDEMKTT 238
I+ RAG + +A+ + P K + W +L+ C G E ++ EM+
Sbjct: 823 IVDMLGRAGKLREAYEFITGIGEPQKAGV-WGALLSACNYHGDTKLGKEVAEVLFEMEPD 881
Query: 239 N 239
N
Sbjct: 882 N 882
>AT1G23450.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:8324698-8326697 FORWARD
Length = 666
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/368 (24%), Positives = 151/368 (41%), Gaps = 72/368 (19%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
M +V +N +I + G + +A+ Y M G R TFP +L R G
Sbjct: 72 MSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESASTFPSVLSVCSDELFCREG 131
Query: 70 FAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASN 129
H + I GF ++FV++AL+ +Y L A K+F+ M ++L N +L +
Sbjct: 132 IQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRNLAVCNLLLRCFCQT 191
Query: 130 GEMEDAISLFHMMPL--------------------------KDLSSF------------- 150
GE + ++ M L K L S
Sbjct: 192 GESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFV 251
Query: 151 -NILISGYSSCGEVLAARSIFDKMAIKDIVSWNSILSACTRAGDMEKAFALFQEMPMKNT 209
N+L+ YS+CG++ + F+ + KD++SWNSI+S C
Sbjct: 252 ANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCA-------------------- 291
Query: 210 ISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVY 269
G +++DLF +M+ P S L+ C+ +++G +IH Y
Sbjct: 292 -----------DYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCY 340
Query: 270 AIYSGL-ASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYA 328
+ G SS HV +AL+DMY KC IE + ++ ++ C N++++ L G
Sbjct: 341 VLKMGFDVSSLHVQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKD 400
Query: 329 ALKLFGYM 336
+++FG M
Sbjct: 401 IIEMFGLM 408
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 156/328 (47%), Gaps = 15/328 (4%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
+P +V WN I+ G+ ++ + MQ G R F L +N + G
Sbjct: 275 VPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSG 334
Query: 70 FAFHGQTIKTGF-YRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYAS 128
H +K GF + VQ+ALI+MYG + ++ +++++P +L NS++ +
Sbjct: 335 KQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMH 394
Query: 129 NGEMEDAISLFHMM-----PLKDLSSFNILISGYSSCGEVLAARSIFDKMAIK-----DI 178
G +D I +F +M + +++ +L + S E L + ++ AIK D+
Sbjct: 395 CGITKDIIEMFGLMIDEGTGIDEVTLSTVLKALSLSLPESLHSCTLVHCCAIKSGYAADV 454
Query: 179 VSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTT 238
S++ A T++G E + +F E+ N +++ G + G ++ V + EM
Sbjct: 455 AVSCSLIDAYTKSGQNEVSRKVFDELDTPNIFCLTSIINGYARNGMGTDCVKMLREMDRM 514
Query: 239 NCLPDYLTATSVLSACAHLGSLETGIKI--HVYAIYSGLASSPHVTTALMDMYAKCGSIE 296
N +PD +T SVLS C+H G +E G I + + Y G++ + ++D+ + G +E
Sbjct: 515 NLIPDEVTILSVLSGCSHSGLVEEGELIFDSLESKY-GISPGRKLYACMVDLLGRAGLVE 573
Query: 297 QALQIFFKAQVK-DIYCWNAIISGLALH 323
+A ++ +A+ D W++++ +H
Sbjct: 574 KAERLLLQARGDADCVAWSSLLQSCRIH 601
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/335 (21%), Positives = 154/335 (45%), Gaps = 18/335 (5%)
Query: 19 NEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTIK 78
N +++ G +++ Y+ M++ G + T+ +++ + G H +K
Sbjct: 182 NLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVK 241
Query: 79 TGF-YRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAIS 137
+G+ +IFV L++ Y + + + F +P KD+++WNS++ A G + D++
Sbjct: 242 SGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLD 301
Query: 138 LFHMMPL----KDLSSFNILISGYSSCGEVLAARSI--------FDKMAIKDIVSWNSIL 185
LF M + F ++ S ++ + + I FD + + ++++
Sbjct: 302 LFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFD---VSSLHVQSALI 358
Query: 186 SACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYL 245
+ +E + L+Q +P N N+++ + G + +++F M D +
Sbjct: 359 DMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDEV 418
Query: 246 TATSVLSACAHL--GSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFF 303
T ++VL A + SL + +H AI SG A+ V+ +L+D Y K G E + ++F
Sbjct: 419 TLSTVLKALSLSLPESLHSCTLVHCCAIKSGYAADVAVSCSLIDAYTKSGQNEVSRKVFD 478
Query: 304 KAQVKDIYCWNAIISGLALHGHGYAALKLFGYMKK 338
+ +I+C +II+G A +G G +K+ M +
Sbjct: 479 ELDTPNIFCLTSIINGYARNGMGTDCVKMLREMDR 513
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 77/160 (48%)
Query: 178 IVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKT 237
+ + N + ++G++ A F EM +++ +++N +++G + G A++L+ EM +
Sbjct: 46 VYTHNRRIDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVS 105
Query: 238 TNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQ 297
T SVLS C+ GI++H I G + V +AL+ +YA ++
Sbjct: 106 CGLRESASTFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDV 165
Query: 298 ALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMK 337
AL++F + +++ N ++ G +++ M+
Sbjct: 166 ALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRME 205
>AT5G50390.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:20520789-20522980 REVERSE
Length = 701
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 156/325 (48%), Gaps = 11/325 (3%)
Query: 22 IKKHMLVGNAEQAVLTYVNMQVH-GFRADNYTFPILLKAAGKNCASRIGFAFHGQTIKTG 80
I+K +L +A + +++ F+ T+ L++A + + R +G + G
Sbjct: 94 IEKLVLCNRFREAFELFEILEIRCSFKVGVSTYDALVEACIRLKSIRCVKRVYGFMMSNG 153
Query: 81 FYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAISLFH 140
F ++ ++ M+ DA ++F+ +P ++L ++ S++ + + G +A LF
Sbjct: 154 FEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFK 213
Query: 141 MM--PLKDLSS--FNILISGYSSCGEVLAARSIFDKMAIKDIVSWNSILSAC-----TRA 191
MM L D + F +++ + G + + + A+K V N+ +S ++
Sbjct: 214 MMWEELSDCETHTFAVMLRASAGLGSIYVGKQLH-VCALKLGVVDNTFVSCGLIDMYSKC 272
Query: 192 GDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVL 251
GD+E A F+ MP K T++WN ++AG G EA+ L +M+ + D T + ++
Sbjct: 273 GDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMI 332
Query: 252 SACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIY 311
L LE + H I +G S TAL+D Y+K G ++ A +F K K+I
Sbjct: 333 RISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNII 392
Query: 312 CWNAIISGLALHGHGYAALKLFGYM 336
WNA++ G A HG G A+KLF M
Sbjct: 393 SWNALMGGYANHGRGTDAVKLFEKM 417
Score = 111 bits (278), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 165/339 (48%), Gaps = 14/339 (4%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
+P + + II + GN +A + M + +TF ++L+A+ + +G
Sbjct: 184 IPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVG 243
Query: 70 FAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASN 129
H +K G + FV LI+MY DA FE MP K VAWN+++ YA +
Sbjct: 244 KQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALH 303
Query: 130 GEMEDAISLFHMMPLKDLS----SFNILISGYSSCGEVLAAR----SIFDKMAIKDIVSW 181
G E+A+ L + M +S + +I+I + ++ + S+ +IV+
Sbjct: 304 GYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVAN 363
Query: 182 NSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCL 241
+++ ++ G ++ A +F ++P KN ISWN ++ G G+ ++AV LF++M N
Sbjct: 364 TALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVA 423
Query: 242 PDYLTATSVLSACAHLGSLETGIKIHV-YAIYSGLASSPHVTTALMDMYAKCGSIEQALQ 300
P+++T +VLSACA+ G E G +I + + G+ ++++ + G +++A+
Sbjct: 424 PNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEAIA 483
Query: 301 IFFKAQVK-DIYCWNAIISGLALHGH----GYAALKLFG 334
+A +K + W A+++ + + A KL+G
Sbjct: 484 FIRRAPLKTTVNMWAALLNACRMQENLELGRVVAEKLYG 522
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 86/158 (54%), Gaps = 4/158 (2%)
Query: 182 NSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEM--KTTN 239
N IL + G + A LF E+P +N S+ ++++G + G + EA +LF M + ++
Sbjct: 162 NRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSD 221
Query: 240 CLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQAL 299
C + T +L A A LGS+ G ++HV A+ G+ + V+ L+DMY+KCG IE A
Sbjct: 222 C--ETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDAR 279
Query: 300 QIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMK 337
F K WN +I+G ALHG+ AL L M+
Sbjct: 280 CAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMR 317
>AT5G08490.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:2745208-2747757 REVERSE
Length = 849
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 148/314 (47%), Gaps = 50/314 (15%)
Query: 74 GQTIKTGFYRHIF------VQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYA 127
G+ I + RH + V ALI+ Y T+ A F M KD+++WN++LDA+A
Sbjct: 349 GKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFA 408
Query: 128 SNGEM----------------EDAISLFHMMP----------LKDLSSF----------- 150
+ + D++++ ++ +K++ +
Sbjct: 409 DSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEE 468
Query: 151 -----NILISGYSSCGEVLAARSIFDKMA-IKDIVSWNSILSACTRAGDMEKAFALFQEM 204
N L+ Y+ CG V A IF ++ + +VS+NS+LS +G + A LF EM
Sbjct: 469 EPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEM 528
Query: 205 PMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGI 264
+ +W+ M+ + +EA+ +F E++ P+ +T ++L CA L SL
Sbjct: 529 STTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVR 588
Query: 265 KIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHG 324
+ H Y I GL + L+D+YAKCGS++ A +F +D+ + A+++G A+HG
Sbjct: 589 QCHGYIIRGGLGD-IRLKGTLLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHG 647
Query: 325 HGYAALKLFGYMKK 338
G AL ++ +M +
Sbjct: 648 RGKEALMIYSHMTE 661
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 142/293 (48%), Gaps = 21/293 (7%)
Query: 62 KNCASRIGFAFHGQTIKTGFYR-HIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWN 120
KN A R G H ++ + + H+FV +L++ Y + +A +F M KDLV+WN
Sbjct: 239 KNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWN 298
Query: 121 SMLDAYASNGEMEDAISLFHMMPLK-DLSSFNI-LISGYSSC--------GEVLAARSIF 170
++ YASN E A LFH + K D+S ++ +IS C G+ + + +
Sbjct: 299 VVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILR 358
Query: 171 DKMAIKDIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTML---AGCLQRGQFSE 227
++D N+++S R GD A+ F M K+ ISWN +L A ++ QF
Sbjct: 359 HSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLN 418
Query: 228 AVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGL---ASSPHVTTA 284
+ T D +T S+L C ++ + ++H Y++ +GL P + A
Sbjct: 419 LLHHLLNEAIT---LDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNA 475
Query: 285 LMDMYAKCGSIEQALQIFFK-AQVKDIYCWNAIISGLALHGHGYAALKLFGYM 336
L+D YAKCG++E A +IF ++ + + +N+++SG G A LF M
Sbjct: 476 LLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEM 528
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 132/303 (43%), Gaps = 15/303 (4%)
Query: 45 GFRADNYTFPILLKAAGKNCASRIGFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADA 104
GF D+ F ++KA G A HG K G V +++NMY D
Sbjct: 16 GFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDC 75
Query: 105 CKMFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMM-----PLKDLSSFNILISGYSS 159
KMF M D V WN +L + + E + F M P +F I++
Sbjct: 76 QKMFRQMDSLDPVVWNIVLTGLSVSCGRE-TMRFFKAMHFADEPKPSSVTFAIVLPLCVR 134
Query: 160 CGEVLAARS----IFDKMAIKDIVSWNSILSACTRAGDM-EKAFALFQEMPMKNTISWNT 214
G+ +S I KD + N+++S + G + A+ F + K+ +SWN
Sbjct: 135 LGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNA 194
Query: 215 MLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLG---SLETGIKIHVYAI 271
++AG + ++A F M P+Y T +VL CA + + +G +IH Y +
Sbjct: 195 IIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVV 254
Query: 272 -YSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAAL 330
S L + V +L+ Y + G IE+A +F + KD+ WN +I+G A + + A
Sbjct: 255 QRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAF 314
Query: 331 KLF 333
+LF
Sbjct: 315 QLF 317
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/280 (20%), Positives = 124/280 (44%), Gaps = 45/280 (16%)
Query: 73 HGQTIKTGFY---RHIFVQTALINMYGTLHCTADACKMFENM-PVKDLVAWNSMLDAYAS 128
HG ++K G + AL++ Y A K+F + + LV++NS+L Y +
Sbjct: 455 HGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVN 514
Query: 129 NGEMEDAISLFHMMPLKDLSSFNILISGYSSCGEVLAARSIFDKMAIK------------ 176
+G +DA LF M DL+++++++ Y+ A +F ++ +
Sbjct: 515 SGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNL 574
Query: 177 --------------------------DIVSWNSILSACTRAGDMEKAFALFQEMPMKNTI 210
DI ++L + G ++ A+++FQ ++ +
Sbjct: 575 LPVCAQLASLHLVRQCHGYIIRGGLGDIRLKGTLLDVYAKCGSLKHAYSVFQSDARRDLV 634
Query: 211 SWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIH--V 268
+ M+AG G+ EA+ ++ M +N PD++ T++L+AC H G ++ G++I+ +
Sbjct: 635 MFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFITTMLTACCHAGLIQDGLQIYDSI 694
Query: 269 YAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVK 308
++ G+ + +D+ A+ G ++ A + V+
Sbjct: 695 RTVH-GMKPTMEQYACAVDLIARGGRLDDAYSFVTQMPVE 733
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 74/162 (45%), Gaps = 14/162 (8%)
Query: 183 SILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGC-----LQRGQFSEAVDLFDEMKT 237
++ + C R D +K +F++M + + WN +L G + +F +A+ DE K
Sbjct: 64 NMYAKCRRMDDCQK---MFRQMDSLDPVVWNIVLTGLSVSCGRETMRFFKAMHFADEPK- 119
Query: 238 TNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSI-E 296
P +T VL C LG G +H Y I +GL V AL+ MYAK G I
Sbjct: 120 ----PSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFP 175
Query: 297 QALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMKK 338
A F KD+ WNAII+G + + A + F M K
Sbjct: 176 DAYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLK 217
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/220 (20%), Positives = 98/220 (44%), Gaps = 11/220 (5%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
M + ++ W+ +++ + +A+ + +Q G R + T LL + + +
Sbjct: 528 MSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLV 587
Query: 70 FAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASN 129
HG I+ G I ++ L+++Y A +F++ +DLV + +M+ YA +
Sbjct: 588 RQCHGYIIRGGL-GDIRLKGTLLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVH 646
Query: 130 GEMEDAISLFHMMPLKDLSSFNILISG-YSSC---GEVLAARSIFDKMAIKDIVSWNSIL 185
G ++A+ ++ M ++ ++ I+ ++C G + I+D + +
Sbjct: 647 GRGKEALMIYSHMTESNIKPDHVFITTMLTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQ 706
Query: 186 SAC-----TRAGDMEKAFALFQEMPMK-NTISWNTMLAGC 219
AC R G ++ A++ +MP++ N W T+L C
Sbjct: 707 YACAVDLIARGGRLDDAYSFVTQMPVEPNANIWGTLLRAC 746
>AT1G77170.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28998133-28999536 REVERSE
Length = 467
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 152/319 (47%), Gaps = 22/319 (6%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTI 77
WN I++ ++ + A+ Y+ M D Y+ PI++KAA + +G H +
Sbjct: 85 WNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVAV 144
Query: 78 KTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAIS 137
+ GF F ++ I +Y +A K+F+ P + L +WN+++ G +A+
Sbjct: 145 RLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVE 204
Query: 138 LFHMMPLKDLSSFNI-LISGYSSCGE-------------VLAARSIFDKMAIKDIVSWNS 183
+F M L + ++S +SCG VL A++ DI+ NS
Sbjct: 205 MFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKT----EEKSDIMMLNS 260
Query: 184 ILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPD 243
++ + G M+ A +F+EM +N +SW++M+ G G EA++ F +M+ P+
Sbjct: 261 LIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPN 320
Query: 244 YLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVT--TALMDMYAKCGSIEQALQI 301
+T VLSAC H G +E G K + + S P ++ ++D+ ++ G +++A ++
Sbjct: 321 KITFVGVLSACVHGGLVEEG-KTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKV 379
Query: 302 FFKAQVK-DIYCWNAIISG 319
+ +K ++ W ++ G
Sbjct: 380 VEEMPMKPNVMVWGCLMGG 398
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 120/251 (47%), Gaps = 12/251 (4%)
Query: 98 LHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMP----LKDLSSFNIL 153
+H ++ + P+ L WN+++ +Y + DAI ++ M L D S I+
Sbjct: 66 IHGDIFRSRILDQYPIAFL--WNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIV 123
Query: 154 ISGYSSCGEVLAARSIFDKMA----IKDIVSWNSILSACTRAGDMEKAFALFQEMPMKNT 209
I + + + + D + ++ +AG+ E A +F E P +
Sbjct: 124 IKAAVQIHDFTLGKELHSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKL 183
Query: 210 ISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIH-- 267
SWN ++ G G+ +EAV++F +MK + PD T SV ++C LG L ++H
Sbjct: 184 GSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKC 243
Query: 268 VYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGY 327
V + S + +L+DMY KCG ++ A IF + + +++ W+++I G A +G+
Sbjct: 244 VLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTL 303
Query: 328 AALKLFGYMKK 338
AL+ F M++
Sbjct: 304 EALECFRQMRE 314
>AT3G22150.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:7813028-7815490 FORWARD
Length = 820
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 161/333 (48%), Gaps = 16/333 (4%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTI 77
WN +I ++ G +A + M + +F + A + + + F+G +
Sbjct: 182 WNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKANVFYGLML 241
Query: 78 KTG--FYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDA 135
K G + + +FV ++ I+MY L + ++F++ +++ WN+M+ Y N + ++
Sbjct: 242 KLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVES 301
Query: 136 ISLF-----HMMPLKDLSSFNILISGYSSCGEVLAARSIFDKMAIKD-----IVSWNSIL 185
I LF + D ++ + S S+ +V R F K+ IV NS++
Sbjct: 302 IELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQ-FHGFVSKNFRELPIVIVNSLM 360
Query: 186 SACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYL 245
+R G + K+F +F M ++ +SWNTM++ +Q G E + L EM+ DY+
Sbjct: 361 VMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYI 420
Query: 246 TATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKA 305
T T++LSA ++L + E G + H + I G+ + + L+DMY+K G I + ++F +
Sbjct: 421 TVTALLSAASNLRNKEIGKQTHAFLIRQGIQFE-GMNSYLIDMYSKSGLIRISQKLFEGS 479
Query: 306 --QVKDIYCWNAIISGLALHGHGYAALKLFGYM 336
+D WN++ISG +GH +F M
Sbjct: 480 GYAERDQATWNSMISGYTQNGHTEKTFLVFRKM 512
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 145/300 (48%), Gaps = 9/300 (3%)
Query: 48 ADNYTFPILLKAAGKNCASRIGFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKM 107
+D T+ + A +G FHG K I + +L+ MY + +
Sbjct: 316 SDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGV 375
Query: 108 FENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMPLKDLSSFNILISGYSSCGEVLAAR 167
F +M +D+V+WN+M+ A+ NG ++ + L + M + I ++ S L +
Sbjct: 376 FLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNK 435
Query: 168 SIFDK---MAIKDIVSWNS----ILSACTRAGDMEKAFALFQE--MPMKNTISWNTMLAG 218
I + I+ + + ++ +++G + + LF+ ++ +WN+M++G
Sbjct: 436 EIGKQTHAFLIRQGIQFEGMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISG 495
Query: 219 CLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASS 278
Q G + +F +M N P+ +T S+L AC+ +GS++ G ++H ++I L +
Sbjct: 496 YTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQN 555
Query: 279 PHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMKK 338
V +AL+DMY+K G+I+ A +F + + ++ + +I G HG G A+ LF M++
Sbjct: 556 VFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQE 615
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 152/332 (45%), Gaps = 20/332 (6%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
M +V WN +I + G ++ ++ MQ GF+ D T LL AA IG
Sbjct: 379 MRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIG 438
Query: 70 FAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFEN--MPVKDLVAWNSMLDAYA 127
H I+ G + + + LI+MY + K+FE +D WNSM+ Y
Sbjct: 439 KQTHAFLIRQGI-QFEGMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYT 497
Query: 128 SNGEMEDAISLFHMMPLKDLSSFNILIS---------GYSSCGEVLAARSIFDKMAIKDI 178
NG E +F M +++ + ++ G G+ L SI + +++
Sbjct: 498 QNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLD-QNV 556
Query: 179 VSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTT 238
++++ ++AG ++ A +F + +N++++ TM+ G Q G A+ LF M+ +
Sbjct: 557 FVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQES 616
Query: 239 NCLPDYLTATSVLSACAHLGSLETGIKI--HVYAIYSGLASSPHVTTALMDMYAKCGSIE 296
PD +T +VLSAC++ G ++ G+KI + +Y+ SS H + DM + G +
Sbjct: 617 GIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHY-CCITDMLGRVGRVN 675
Query: 297 QALQIFFKAQVKD---IYCWNAIISGLALHGH 325
+A + F K ++ W +++ LHG
Sbjct: 676 EAYE-FVKGLGEEGNIAELWGSLLGSCKLHGE 706
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/358 (25%), Positives = 153/358 (42%), Gaps = 21/358 (5%)
Query: 2 PLLVCNCF--MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHG--FRADNYTFPILL 57
P L F +P WN II + +A+L Y M+ D YT+ L
Sbjct: 55 PQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSSTL 114
Query: 58 KAAGKNCASRIGFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTAD------ACKMFENM 111
KA + + G A H I+ V +L+NMY + D K+F+NM
Sbjct: 115 KACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFDNM 174
Query: 112 PVKDLVAWNSMLDAYASNGEMEDAISLFHMMPLKDLS----SFNILISGYSSCGEVLAAR 167
K++VAWN+++ Y G +A F +M ++ SF + S + A
Sbjct: 175 RRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKAN 234
Query: 168 SIFDKMA------IKDIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQ 221
+ M +KD+ +S +S GD+E + +F +N WNTM+ +Q
Sbjct: 235 VFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQ 294
Query: 222 RGQFSEAVDLFDE-MKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPH 280
E+++LF E + + + D +T SA + L +E G + H + +
Sbjct: 295 NDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIV 354
Query: 281 VTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMKK 338
+ +LM MY++CGS+ ++ +F + +D+ WN +IS +G L L M+K
Sbjct: 355 IVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQK 412
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 77/169 (45%), Gaps = 12/169 (7%)
Query: 180 SWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTT- 238
S S LS + G+ + A LF +P T+ WNT++ G + EA+ + MK T
Sbjct: 41 SIRSRLSKICQDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTA 100
Query: 239 ---NCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSI 295
NC D T +S L ACA +L+ G +H + I SS V +LM+MY C +
Sbjct: 101 PFTNC--DAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNA 158
Query: 296 EQALQ------IFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMKK 338
+ +F + K++ WN +IS G A + FG M +
Sbjct: 159 PDCFEYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMR 207
>AT1G64310.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23866053-23867711 FORWARD
Length = 552
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 155/331 (46%), Gaps = 8/331 (2%)
Query: 11 PSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGF 70
P V WN II+ + + + + R DN+T+ L + ++ ++
Sbjct: 67 PERSVFLWNSIIRAYAKAHQFTTVLSLFSQILRSDTRPDNFTYACLARGFSESFDTKGLR 126
Query: 71 AFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNG 130
HG I +G +A++ Y +A K+F ++P DL WN M+ Y G
Sbjct: 127 CIHGIAIVSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCG 186
Query: 131 EMEDAISLFHMMPLK----DLSSFNILISGYSSCGEVLAARSIFDKMAIKDIVSWN---- 182
+ I+LF++M + + + L SG +L A S+ ++ S +
Sbjct: 187 FWDKGINLFNLMQHRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGC 246
Query: 183 SILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLP 242
++++ +R + A ++F + + ++ ++++ G + G EA+ LF E++ + P
Sbjct: 247 ALVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKP 306
Query: 243 DYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIF 302
D + VL +CA L +G ++H Y I GL V +AL+DMY+KCG ++ A+ +F
Sbjct: 307 DCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLF 366
Query: 303 FKAQVKDIYCWNAIISGLALHGHGYAALKLF 333
K+I +N++I GL LHG A + F
Sbjct: 367 AGIPEKNIVSFNSLILGLGLHGFASTAFEKF 397
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 144/309 (46%), Gaps = 11/309 (3%)
Query: 8 CFMPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASR 67
C +P ++ WN +I + G ++ + + MQ G + + YT L
Sbjct: 165 CSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQPNCYTMVALTSGLIDPSLLL 224
Query: 68 IGFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYA 127
+ ++ H +K H +V AL+NMY C A AC +F ++ DLVA +S++ Y+
Sbjct: 225 VAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYS 284
Query: 128 SNGEMEDAISLFHMMPLKDLSSFNILIS-GYSSCGEV---LAARSIFD---KMAIK-DIV 179
G ++A+ LF + + +L++ SC E+ ++ + + ++ ++ DI
Sbjct: 285 RCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIK 344
Query: 180 SWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTN 239
++++ ++ G ++ A +LF +P KN +S+N+++ G G S A + F E+
Sbjct: 345 VCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFASTAFEKFTEILEMG 404
Query: 240 CLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVT--TALMDMYAKCGSIEQ 297
+PD +T +++L C H G L G +I + S P ++ + G +E+
Sbjct: 405 LIPDEITFSALLCTCCHSGLLNKGQEI-FERMKSEFGIEPQTEHYVYMVKLMGMAGKLEE 463
Query: 298 ALQIFFKAQ 306
A + Q
Sbjct: 464 AFEFVMSLQ 472
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 119/274 (43%), Gaps = 8/274 (2%)
Query: 72 FHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGE 131
H K+ R + T L Y A K+F+ P + + WNS++ AYA +
Sbjct: 27 LHSFVTKSKLARDPYFATQLARFYALNDDLISARKLFDVFPERSVFLWNSIIRAYAKAHQ 86
Query: 132 MEDAISLFHMMPLKDLSSFNI----LISGYSSCGEVLAARSIFDKMAIK----DIVSWNS 183
+SLF + D N L G+S + R I + D + ++
Sbjct: 87 FTTVLSLFSQILRSDTRPDNFTYACLARGFSESFDTKGLRCIHGIAIVSGLGFDQICGSA 146
Query: 184 ILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPD 243
I+ A ++AG + +A LF +P + WN M+ G G + + ++LF+ M+ P+
Sbjct: 147 IVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQPN 206
Query: 244 YLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFF 303
T ++ S L +H + + L S +V AL++MY++C I A +F
Sbjct: 207 CYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSVFN 266
Query: 304 KAQVKDIYCWNAIISGLALHGHGYAALKLFGYMK 337
D+ +++I+G + G+ AL LF ++
Sbjct: 267 SISEPDLVACSSLITGYSRCGNHKEALHLFAELR 300
>AT3G56550.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:20952896-20954641 REVERSE
Length = 581
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 149/318 (46%), Gaps = 13/318 (4%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGF-RADNYTFPILLKAAGKNCASRIGFAFHGQT 76
WN +I+ + ++L Y M + R D +TF LK+ + + HG
Sbjct: 74 WNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCLEIHGSV 133
Query: 77 IKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAI 136
I++GF V T+L+ Y A K+F+ MPV+DLV+WN M+ ++ G A+
Sbjct: 134 IRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQAL 193
Query: 137 SLFHMMPLKDLSSFN-ILISGYSSCGEVLA-------ARSIFDKMAIKDIVSWNSILSAC 188
S++ M + + + L++ SSC V A R D + N+++
Sbjct: 194 SMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMY 253
Query: 189 TRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTAT 248
+ G +E A +F M ++ ++WN+M+ G G EA+ F +M + P+ +T
Sbjct: 254 AKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFL 313
Query: 249 SVLSACAHLGSLETGIKIHVYAIYSGLASSPHVT--TALMDMYAKCGSIEQALQIFFKAQ 306
+L C+H G ++ G++ H + S +P+V ++D+Y + G +E +L++ + +
Sbjct: 314 GLLLGCSHQGLVKEGVE-HFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASS 372
Query: 307 V-KDIYCWNAIISGLALH 323
+D W ++ +H
Sbjct: 373 CHEDPVLWRTLLGSCKIH 390
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 116/229 (50%), Gaps = 13/229 (5%)
Query: 119 WNSMLDAYASNGEMEDAISLFHMMPLK-----DLSSFNI------LISGYSSCGEVLAAR 167
WN ++ ++++ ++I ++ M L DL +FN I C E+
Sbjct: 74 WNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCLEIHG-- 131
Query: 168 SIFDKMAIKDIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSE 227
S+ + D + S++ + G +E A +F EMP+++ +SWN M+ G ++
Sbjct: 132 SVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQ 191
Query: 228 AVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMD 287
A+ ++ M D T ++LS+CAH+ +L G+ +H A S V+ AL+D
Sbjct: 192 ALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALID 251
Query: 288 MYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYM 336
MYAKCGS+E A+ +F + +D+ WN++I G +HGHG A+ F M
Sbjct: 252 MYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKM 300
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 112/259 (43%), Gaps = 18/259 (6%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
MP ++ WN +I VG QA+ Y M G D+YT LL + A +G
Sbjct: 168 MPVRDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMG 227
Query: 70 FAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASN 129
H +FV ALI+MY +A +F M +D++ WNSM+ Y +
Sbjct: 228 VMLHRIACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVH 287
Query: 130 GEMEDAISLFHMMPLKDLS----SFNILISGYSSCGEVLAARSIFDKMAIK-----DIVS 180
G +AIS F M + +F L+ G S G V F+ M+ + ++
Sbjct: 288 GHGVEAISFFRKMVASGVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKH 347
Query: 181 WNSILSACTRAGDMEKAFAL-FQEMPMKNTISWNTMLAGC-----LQRGQFSEAVDLFDE 234
+ ++ RAG +E + + + ++ + W T+L C L+ G+ A+ +
Sbjct: 348 YGCMVDLYGRAGQLENSLEMIYASSCHEDPVLWRTLLGSCKIHRNLELGEV--AMKKLVQ 405
Query: 235 MKTTNCLPDYLTATSVLSA 253
++ N DY+ TS+ SA
Sbjct: 406 LEAFNA-GDYVLMTSIYSA 423
>AT3G50420.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:18710871-18713649 REVERSE
Length = 794
Score = 114 bits (286), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 144/325 (44%), Gaps = 9/325 (2%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTI 77
WN +I + E ++ + NM + G +T+ I+L K + +G H + I
Sbjct: 268 WNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARII 327
Query: 78 KTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAIS 137
+ + + AL++MY + +A +F + +LV+WNS++ + NG E A+
Sbjct: 328 VSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAML 387
Query: 138 LFHMM-----PLKDLSSFNILISGYSSCGEVLAARSIFDKMAI----KDIVSWNSILSAC 188
++ + P D +F+ IS + + + + ++ + + ++LS
Sbjct: 388 MYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMY 447
Query: 189 TRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTAT 248
+ + E A +F M ++ + W M+ G + G AV F EM D + +
Sbjct: 448 FKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLS 507
Query: 249 SVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVK 308
SV+ AC+ + L G H AI +G V AL+DMY K G E A IF A
Sbjct: 508 SVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASNP 567
Query: 309 DIYCWNAIISGLALHGHGYAALKLF 333
D+ CWN+++ + HG AL F
Sbjct: 568 DLKCWNSMLGAYSQHGMVEKALSFF 592
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 143/281 (50%), Gaps = 11/281 (3%)
Query: 68 IGFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYA 127
+G + + Q IK G+ ++ VQT+++ MY + A ++F+ + +D VAWN+M+
Sbjct: 217 MGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSL 276
Query: 128 SNGEMEDAISLFHMMPLKDLS----SFNILISGYS-----SCGEVLAARSIFDKMAIKDI 178
N ++ED + F M + + +++I+++G S S G+++ AR I ++ D+
Sbjct: 277 KNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSD-SLADL 335
Query: 179 VSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDE-MKT 237
N++L GDM +AF +F + N +SWN++++GC + G +A+ ++ ++
Sbjct: 336 PLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRM 395
Query: 238 TNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQ 297
+ PD T ++ +SA A G +H G S V T L+ MY K E
Sbjct: 396 STPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAES 455
Query: 298 ALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMKK 338
A ++F + +D+ W +I G + G+ A++ F M +
Sbjct: 456 AQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYR 496
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 127/257 (49%), Gaps = 9/257 (3%)
Query: 86 FVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMED-AISLFHMMPL 144
+ LI+MY A K+F+ MP +++V++N++ AY+ N + A L M
Sbjct: 133 YANNNLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAF 192
Query: 145 K----DLSSFNILISGYSSCGEVLAARSIFD---KMAIKD-IVSWNSILSACTRAGDMEK 196
+ + S+F L+ + +VL S+ K+ D +V S+L + GD+E
Sbjct: 193 EYVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLES 252
Query: 197 AFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAH 256
A +F + ++ ++WNTM+ G L+ + + + F M + P T + VL+ C+
Sbjct: 253 ARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSK 312
Query: 257 LGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAI 316
LGS G IH I S + + AL+DMY CG + +A +F + ++ WN+I
Sbjct: 313 LGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSI 372
Query: 317 ISGLALHGHGYAALKLF 333
ISG + +G G A+ ++
Sbjct: 373 ISGCSENGFGEQAMLMY 389
Score = 107 bits (268), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 138/295 (46%), Gaps = 13/295 (4%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNM-QVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQT 76
WN II G EQA+L Y + ++ R D YTF + A + G HGQ
Sbjct: 369 WNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQV 428
Query: 77 IKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAI 136
K G+ R +FV T L++MY A K+F+ M +D+V W M+ ++ G E A+
Sbjct: 429 TKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAV 488
Query: 137 SLF-HMMPLKDLSSFNILISGYSSCGEVLAAR--SIFDKMAIKDIVSWNSILSACT---- 189
F M K+ S L S +C ++ R +F +AI+ ++ ++S C
Sbjct: 489 QFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIR--TGFDCVMSVCGALVD 546
Query: 190 ---RAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLT 246
+ G E A +F + WN+ML Q G +A+ F+++ +PD +T
Sbjct: 547 MYGKNGKYETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVT 606
Query: 247 ATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQI 301
S+L+AC+H GS G + G+ + + ++++ +K G +++AL++
Sbjct: 607 YLSLLAACSHRGSTLQGKFLWNQMKEQGIKAGFKHYSCMVNLVSKAGLVDEALEL 661
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 111/221 (50%), Gaps = 10/221 (4%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
M +V W E+I H +GN+E AV ++ M R+D ++ ++ A R G
Sbjct: 463 MKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQG 522
Query: 70 FAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASN 129
FH I+TGF + V AL++MYG A +F DL WNSML AY+ +
Sbjct: 523 EVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASNPDLKCWNSMLGAYSQH 582
Query: 130 GEMEDAISLFHMMP----LKDLSSFNILISGYSSCGEVLAARSIFDKMAIKDIVS----W 181
G +E A+S F + + D ++ L++ S G L + ++++M + I + +
Sbjct: 583 GMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQMKEQGIKAGFKHY 642
Query: 182 NSILSACTRAGDMEKAFALFQEMPMKNTIS--WNTMLAGCL 220
+ +++ ++AG +++A L ++ P N + W T+L+ C+
Sbjct: 643 SCMVNLVSKAGLVDEALELIEQSPPGNNQAELWRTLLSACV 683
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 114/252 (45%), Gaps = 18/252 (7%)
Query: 86 FVQTALINMYGTLHCTADACKMFENMPVKDLVA---------WNSMLDAYASNGEMEDAI 136
+ LI+MY A K+F+ MP +++V + SM + S +
Sbjct: 23 YANNNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGSF 82
Query: 137 SLFHMMPLKDLSSFNILISGYSSCGEVLA-ARSIFDKM-------AIKDIVSWNSILSAC 188
+ MPL +++S + ++ VL AR I + A + + N+++S
Sbjct: 83 QMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMY 142
Query: 189 TRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQF-SEAVDLFDEMKTTNCLPDYLTA 247
R G +E+A +F +MP +N +S+N + + + F S A L M P+ T
Sbjct: 143 VRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTF 202
Query: 248 TSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQV 307
TS++ CA L + G ++ I G + + V T+++ MY+ CG +E A +IF
Sbjct: 203 TSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNN 262
Query: 308 KDIYCWNAIISG 319
+D WN +I G
Sbjct: 263 RDAVAWNTMIVG 274
>AT2G41080.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:17132857-17134554 FORWARD
Length = 565
Score = 114 bits (286), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 127/254 (50%), Gaps = 8/254 (3%)
Query: 91 LINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMP----LKD 146
LIN Y +A K+F+ MP + L WN+M+ E+ +SLF M D
Sbjct: 31 LINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPD 90
Query: 147 LSSFNILISGYSSCGEVLAARSIFD---KMAIK-DIVSWNSILSACTRAGDMEKAFALFQ 202
+ + SG + V + I K ++ D+V +S+ R G ++ + +
Sbjct: 91 EYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIR 150
Query: 203 EMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLET 262
MP++N ++WNT++ G Q G + L+ MK + C P+ +T +VLS+C+ L
Sbjct: 151 SMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQ 210
Query: 263 GIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLAL 322
G +IH AI G +S V ++L+ MY+KCG + A + F + + +D W+++IS
Sbjct: 211 GQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGF 270
Query: 323 HGHGYAALKLFGYM 336
HG G A++LF M
Sbjct: 271 HGQGDEAIELFNTM 284
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/343 (27%), Positives = 159/343 (46%), Gaps = 27/343 (7%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
MP ++ WN +I + E+ + + M GF D YT + + + IG
Sbjct: 51 MPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIG 110
Query: 70 FAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASN 129
HG TIK G + V ++L +MY D + +MPV++LVAWN+++ A N
Sbjct: 111 QQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQN 170
Query: 130 GEMEDAISLFHMMPLKDLSSFNI-LISGYSSCGEVLAARSIFDKM---AIK--------D 177
G E + L+ MM + I ++ SSC + LA R ++ AIK
Sbjct: 171 GCPETVLYLYKMMKISGCRPNKITFVTVLSSCSD-LAIRGQGQQIHAEAIKIGASSVVAV 229
Query: 178 IVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEM-K 236
+ S S+ S C GD KAF+ E ++ + W++M++ GQ EA++LF+ M +
Sbjct: 230 VSSLISMYSKCGCLGDAAKAFS---EREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAE 286
Query: 237 TTNCLPDYLTATSVLSACAHLGSLETGIK-----IHVYAIYSGLASSPHVTTALMDMYAK 291
TN + + ++L AC+H G + G++ + Y GL T ++D+ +
Sbjct: 287 QTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKH----YTCVVDLLGR 342
Query: 292 CGSIEQALQIFFKAQVK-DIYCWNAIISGLALHGHGYAALKLF 333
G ++QA I +K DI W ++S +H + A ++F
Sbjct: 343 AGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVF 385
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 94/184 (51%)
Query: 154 ISGYSSCGEVLAARSIFDKMAIKDIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWN 213
+S YS G+ +A +++ +M K+ +S N +++ RAGD+ A +F EMP + +WN
Sbjct: 1 MSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWN 60
Query: 214 TMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYS 273
M+AG +Q E + LF EM PD T SV S A L S+ G +IH Y I
Sbjct: 61 AMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKY 120
Query: 274 GLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLF 333
GL V ++L MY + G ++ + V+++ WN +I G A +G L L+
Sbjct: 121 GLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLY 180
Query: 334 GYMK 337
MK
Sbjct: 181 KMMK 184
>AT3G49710.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:18437845-18440010 FORWARD
Length = 721
Score = 114 bits (285), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 95/346 (27%), Positives = 156/346 (45%), Gaps = 26/346 (7%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
+P + +N +I + A++ + M+ GF D +T L+ A C R+
Sbjct: 100 IPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGLIAA----CCDRVD 155
Query: 70 F--AFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENM-PVKDLVAWNSMLDAY 126
H ++ GF + V A + Y +A +F M ++D V+WNSM+ AY
Sbjct: 156 LIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAY 215
Query: 127 ASNGEMEDAISLFHMMPLKD--------------LSSFNILISGYSSCGEVLAARSIFDK 172
+ E A++L+ M K L+S + LI G G+++ A +
Sbjct: 216 GQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNS 275
Query: 173 MAIKDIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSE-AVDL 231
++ + S C D EK +FQE+ + + WNTM++G + SE AV
Sbjct: 276 HVGSGLIDFYSKCGGCDGMYDSEK---VFQEILSPDLVVWNTMISGYSMNEELSEEAVKS 332
Query: 232 FDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSP-HVTTALMDMYA 290
F +M+ PD + V SAC++L S +IH AI S + S+ V AL+ +Y
Sbjct: 333 FRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYY 392
Query: 291 KCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYM 336
K G+++ A +F + + +N +I G A HGHG AL L+ M
Sbjct: 393 KSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRM 438
Score = 114 bits (285), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 142/297 (47%), Gaps = 18/297 (6%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTI 77
WN +I + +A+ Y M GF+ D +T +L A G FHG+ I
Sbjct: 208 WNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLI 267
Query: 78 KTGFYRHIFVQTALINMY---GTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEM-E 133
K GF+++ V + LI+ Y G D+ K+F+ + DLV WN+M+ Y+ N E+ E
Sbjct: 268 KAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSE 327
Query: 134 DAISLFHMMPL----KDLSSFNILISGYSSCGEVLAARSIFDKMAIKDIVSWNSI----- 184
+A+ F M D SF + S S+ + I +AIK + N I
Sbjct: 328 EAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHG-LAIKSHIPSNRISVNNA 386
Query: 185 -LSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPD 243
+S ++G+++ A +F MP N +S+N M+ G Q G +EA+ L+ M + P+
Sbjct: 387 LISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPN 446
Query: 244 YLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVT--TALMDMYAKCGSIEQA 298
+T +VLSACAH G ++ G + + + P + ++D+ + G +E+A
Sbjct: 447 KITFVAVLSACAHCGKVDEG-QEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEA 502
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 144/322 (44%), Gaps = 45/322 (13%)
Query: 62 KNCASR---IGFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVA 118
K+ A R G + H +K+ ++ +N+Y + A F + ++ +
Sbjct: 17 KSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFS 76
Query: 119 WNSMLDAYASNGEMEDAISLFHMMPLKDLSSFNILISGYSSCGEVLAARSIFDKMAI--- 175
+N ++ AYA + ++ A LF +P D S+N LISGY+ E AA +F +M
Sbjct: 77 YNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGF 136
Query: 176 -KDIVSWNSILSAC---------------------------------TRAGDMEKAFALF 201
D + + +++AC ++ G + +A ++F
Sbjct: 137 EVDGFTLSGLIAACCDRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVF 196
Query: 202 QEM-PMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSL 260
M +++ +SWN+M+ Q + ++A+ L+ EM D T SVL+A L L
Sbjct: 197 YGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHL 256
Query: 261 ETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIE---QALQIFFKAQVKDIYCWNAII 317
G + H I +G + HV + L+D Y+KCG + + ++F + D+ WN +I
Sbjct: 257 IGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMI 316
Query: 318 SGLALHGH-GYAALKLFGYMKK 338
SG +++ A+K F M++
Sbjct: 317 SGYSMNEELSEEAVKSFRQMQR 338
>AT1G34160.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:12441393-12443256 FORWARD
Length = 558
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 140/276 (50%), Gaps = 24/276 (8%)
Query: 78 KTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAIS 137
++ F R ++ I+ +G L + A ++F +P WN+++ +A + A S
Sbjct: 33 QSSFLRSRLLERCAISPFGDL---SFAVQIFRYIPKPLTNDWNAIIRGFAGSSHPSLAFS 89
Query: 138 LFHMMPLKDLSSFNILISGYSSCGEVLAA------RSIFDKMAIK--------DIVSWNS 183
+ M + SS I +C L A S D++ + D + +
Sbjct: 90 WYRSMLQQSSSSSAICRVDALTCSFTLKACARALCSSAMDQLHCQINRRGLSADSLLCTT 149
Query: 184 ILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPD 243
+L A ++ GD+ A+ LF EMP+++ SWN ++AG + + SEA++L+ M+T
Sbjct: 150 LLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRS 209
Query: 244 YLTATSVLSACAHLGSLETGIKI-HVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIF 302
+T + L AC+HLG ++ G I H Y+ + V+ A +DMY+KCG +++A Q+F
Sbjct: 210 EVTVVAALGACSHLGDVKEGENIFHGYS-----NDNVIVSNAAIDMYSKCGFVDKAYQVF 264
Query: 303 FK-AQVKDIYCWNAIISGLALHGHGYAALKLFGYMK 337
+ K + WN +I+G A+HG + AL++F ++
Sbjct: 265 EQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLE 300
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/321 (21%), Positives = 146/321 (45%), Gaps = 12/321 (3%)
Query: 9 FMPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGF------RADNYTFPILLKAAGK 62
++P WN II+ + A Y +M R D T LKA +
Sbjct: 62 YIPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACAR 121
Query: 63 NCASRIGFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSM 122
S H Q + G + T L++ Y A K+F+ MPV+D+ +WN++
Sbjct: 122 ALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNAL 181
Query: 123 LDAYASNGEMEDAISLFHMMPLKDLSSFNI-LISGYSSC---GEVLAARSIFDKMAIKDI 178
+ S +A+ L+ M + + + +++ +C G+V +IF + ++
Sbjct: 182 IAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYSNDNV 241
Query: 179 VSWNSILSACTRAGDMEKAFALFQEMP-MKNTISWNTMLAGCLQRGQFSEAVDLFDEMKT 237
+ N+ + ++ G ++KA+ +F++ K+ ++WNTM+ G G+ A+++FD+++
Sbjct: 242 IVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLED 301
Query: 238 TNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQ 297
PD ++ + L+AC H G +E G+ + G+ + ++D+ ++ G + +
Sbjct: 302 NGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACKGVERNMKHYGCVVDLLSRAGRLRE 361
Query: 298 ALQIFFK-AQVKDIYCWNAII 317
A I + + D W +++
Sbjct: 362 AHDIICSMSMIPDPVLWQSLL 382
>AT1G74400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:27963953-27965341 FORWARD
Length = 462
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 161/333 (48%), Gaps = 31/333 (9%)
Query: 19 NEIIKKHMLVGNAEQAVLTYVNMQVHGFR-----ADNYTFPILLKAAGKNCASRI-GFAF 72
N +K+++ G +A+L + H FR D+++ +K + AS + G
Sbjct: 32 NHTLKQYLESGEPIKALLDFR----HRFRQSPSFVDSFSVLFAIKVSSAQKASSLDGRQI 87
Query: 73 HGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVK-DLVAWNSMLDAYASNGE 131
H K GF I +QT+L+ Y ++ A ++F+ P K ++V W +M+ AY N
Sbjct: 88 HALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENEN 147
Query: 132 MEDAISLFHMMPLKDLSSFNILIS-GYSSC--------GEVLAARSIFDKMAIK-DIVSW 181
+AI LF M + + ++++ S+C GE + +RSI K + D+
Sbjct: 148 SVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLR 207
Query: 182 NSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKT---- 237
NS+L+ ++G+ EKA LF E K+ ++ +M+ G GQ E+++LF +MKT
Sbjct: 208 NSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQS 267
Query: 238 --TNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVT--TALMDMYAKCG 293
T P+ +T VL AC+H G +E G K H ++ P ++D++ + G
Sbjct: 268 QDTVITPNDVTFIGVLMACSHSGLVEEG-KRHFKSMIMDYNLKPREAHFGCMVDLFCRSG 326
Query: 294 SIEQALQIFFKAQVK-DIYCWNAIISGLALHGH 325
++ A + + +K + W ++ +LHG+
Sbjct: 327 HLKDAHEFINQMPIKPNTVIWRTLLGACSLHGN 359
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 86/158 (54%), Gaps = 3/158 (1%)
Query: 183 SILSACTRAGDMEKAFALFQEMPMK-NTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCL 241
S++ + GD++ A +F E P K N + W M++ + EA++LF M+
Sbjct: 105 SLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIE 164
Query: 242 PDYLTATSVLSACAHLGSLETGIKIHVYAIYSG--LASSPHVTTALMDMYAKCGSIEQAL 299
D + T LSACA LG+++ G +I+ +I LA + +L++MY K G E+A
Sbjct: 165 LDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKAR 224
Query: 300 QIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMK 337
++F ++ KD+ + ++I G AL+G +L+LF MK
Sbjct: 225 KLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMK 262
>AT1G09220.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:2977952-2978968 REVERSE
Length = 338
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 100/186 (53%), Gaps = 4/186 (2%)
Query: 157 YSSCGEVLAARSIFDKMAIKDIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTML 216
Y G ++ A +FD+M ++ V+WN +++ T GD EKA ++MP + +SW T++
Sbjct: 2 YLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKMPNRTVVSWTTII 61
Query: 217 AGCLQRGQFSEAVDLFDEMKTTNCL-PDYLTATSVLSACAHLGSLETGIKIHVYAIYSGL 275
G + + EA+ LF M + + P+ +T ++L A +LG L+ +H Y G
Sbjct: 62 DGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGSVHAYVGKRGF 121
Query: 276 ASSP-HVTTALMDMYAKCGSIEQALQIFFKAQ--VKDIYCWNAIISGLALHGHGYAALKL 332
VT +L+D YAKCG I+ A + F + K++ W +IS A+HG G A+ +
Sbjct: 122 VPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAVSM 181
Query: 333 FGYMKK 338
F M++
Sbjct: 182 FKDMER 187
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 111/252 (44%), Gaps = 45/252 (17%)
Query: 103 DACKMFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMPLKDLSSFNILISGYSSCGE 162
DA K+F+ MP ++ V WN M+ + G+ E A+ MP + + S+ +I GY+ +
Sbjct: 10 DAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKMPNRTVVSWTTIIDGYARVDK 69
Query: 163 VLAARSIFDKM----AIK-------------------------------------DIVSW 181
A +F +M AIK DI
Sbjct: 70 PKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVT 129
Query: 182 NSILSACTRAGDMEKAFALFQEMP--MKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTN 239
NS++ A + G ++ AF F E+P KN +SW TM++ G EAV +F +M+
Sbjct: 130 NSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDMERLG 189
Query: 240 CLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVT--TALMDMYAKCGSIEQ 297
P+ +T SVL+AC+H G E + + +P V L+DM + G +E+
Sbjct: 190 LKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKITPDVKHYGCLVDMLRRKGRLEE 249
Query: 298 ALQIFFKAQVKD 309
A +I + +++
Sbjct: 250 AEKIALEIPIEE 261
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 100/230 (43%), Gaps = 18/230 (7%)
Query: 8 CF---MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNM-QVHGFRADNYTFPILLKAAGKN 63
CF MP+ V W II + V ++A+L + M + + T +L A
Sbjct: 44 CFLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNL 103
Query: 64 CASRIGFAFHGQTIKTGFYR-HIFVQTALINMYGTLHCTADACKMFENMP--VKDLVAWN 120
++ + H K GF I V +LI+ Y C A K F +P K+LV+W
Sbjct: 104 GDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWT 163
Query: 121 SMLDAYASNGEMEDAISLFHMMPLKDLSSFNI-LISGYSSCGEVLAAR----SIFDKMA- 174
+M+ A+A +G ++A+S+F M L + +IS ++C A F+ M
Sbjct: 164 TMISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVN 223
Query: 175 ----IKDIVSWNSILSACTRAGDMEKAFALFQEMPMKN-TISWNTMLAGC 219
D+ + ++ R G +E+A + E+P++ + W +L C
Sbjct: 224 EYKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGAC 273
>AT3G47530.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:17517382-17519157 REVERSE
Length = 591
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 134/251 (53%), Gaps = 20/251 (7%)
Query: 104 ACKMFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMPLKDLSSFNILISGYS----- 158
+C++F L N+M+ A++ + + LF + N L S ++
Sbjct: 65 SCRVFSQRLNPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCI 124
Query: 159 SCGEVLAARSIFDKMAIKDIVSWNSIL--------SACTRAGDMEKAFALFQEMPMKNTI 210
G++L I K+ +S +S+L S C + D A +F E+P ++T+
Sbjct: 125 KSGDLLGGLQIHGKIFSDGFLS-DSLLMTTLMDLYSTCENSTD---ACKVFDEIPKRDTV 180
Query: 211 SWNTMLAGCLQRGQFSEAVDLFDEMKTT--NCL-PDYLTATSVLSACAHLGSLETGIKIH 267
SWN + + L+ + + + LFD+MK C+ PD +T L ACA+LG+L+ G ++H
Sbjct: 181 SWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVH 240
Query: 268 VYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGY 327
+ +GL+ + +++ L+ MY++CGS+++A Q+F+ + +++ W A+ISGLA++G G
Sbjct: 241 DFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGK 300
Query: 328 AALKLFGYMKK 338
A++ F M K
Sbjct: 301 EAIEAFNEMLK 311
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 127/271 (46%), Gaps = 16/271 (5%)
Query: 69 GFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYAS 128
G HG+ GF + T L+++Y T + DACK+F+ +P +D V+WN + Y
Sbjct: 132 GLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLR 191
Query: 129 NGEMEDAISLFHMMP-------LKDLSSFNILISGYSSCGEVLAARSIFDKMAIKDIVSW 181
N D + LF M D + + + ++ G + + + D + +
Sbjct: 192 NKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGA 251
Query: 182 ----NSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKT 237
N+++S +R G M+KA+ +F M +N +SW +++G G EA++ F+EM
Sbjct: 252 LNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLK 311
Query: 238 TNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSG---LASSPHVTTALMDMYAKCGS 294
P+ T T +LSAC+H G + G+ + + SG + + H ++D+ +
Sbjct: 312 FGISPEEQTLTGLLSACSHSGLVAEGM-MFFDRMRSGEFKIKPNLHHYGCVVDLLGRARL 370
Query: 295 IEQALQIFFKAQVK-DIYCWNAIISGLALHG 324
+++A + ++K D W ++ +HG
Sbjct: 371 LDKAYSLIKSMEMKPDSTIWRTLLGACRVHG 401
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 101/235 (42%), Gaps = 16/235 (6%)
Query: 6 CNCF--MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQ--VHG-FRADNYTFPILLKAA 60
C F +P + WN + ++ ++ + M+ V G + D T + L+A
Sbjct: 168 CKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQAC 227
Query: 61 GKNCASRIGFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWN 120
A G H + G + + L++MY A ++F M +++V+W
Sbjct: 228 ANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWT 287
Query: 121 SMLDAYASNGEMEDAISLFHMMPLKDLS----SFNILISGYSSCGEVLAARSIFDKM--- 173
+++ A NG ++AI F+ M +S + L+S S G V FD+M
Sbjct: 288 ALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSG 347
Query: 174 --AIK-DIVSWNSILSACTRAGDMEKAFALFQEMPMK-NTISWNTMLAGCLQRGQ 224
IK ++ + ++ RA ++KA++L + M MK ++ W T+L C G
Sbjct: 348 EFKIKPNLHHYGCVVDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGD 402
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-449838 REVERSE
Length = 500
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 113/221 (51%), Gaps = 12/221 (5%)
Query: 126 YASNGEMEDAISLFHMMPLKDLSSFNILISGYS-SC----GEVLAARSIFDKMAIK-DIV 179
Y G + A +F MM K++ ++N L+SG S +C E L R +K IK D +
Sbjct: 2 YIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIR--MEKEGIKPDAI 59
Query: 180 SWNSILSACTRAGDMEKAFALFQEMPMK----NTISWNTMLAGCLQRGQFSEAVDLFDEM 235
+WNS+ S G EKA + +M K N +SW + +GC + G F A+ +F +M
Sbjct: 60 TWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKM 119
Query: 236 KTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSI 295
+ P+ T +++L L L +G ++H + + L +V TAL+DMY K G +
Sbjct: 120 QEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDL 179
Query: 296 EQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYM 336
+ A++IF+ + K + WN ++ G A+ G G + F M
Sbjct: 180 QSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVM 220
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 107/266 (40%), Gaps = 26/266 (9%)
Query: 78 KTGFYRHIFVQTALINMYGTLHCTADAC----KMFENMPVKDLVAWNSMLDAYASNGEME 133
K G +L + Y TL A KM E ++V+W ++ + NG
Sbjct: 51 KEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFR 110
Query: 134 DAISLFHMMP--------------LKDLSSFNILISGYSSCGEVLAARSIFDKMAIKDIV 179
+A+ +F M LK L ++L SG G L I D
Sbjct: 111 NALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVA---- 166
Query: 180 SWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTN 239
+++ ++GD++ A +F + K+ SWN ML G G+ E + F M
Sbjct: 167 --TALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAG 224
Query: 240 CLPDYLTATSVLSACAHLGSLETGIK-IHVYAIYSGLASSPHVTTALMDMYAKCGSIEQA 298
PD +T TSVLS C + G ++ G K + G+ + + ++D+ + G +++A
Sbjct: 225 MEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEA 284
Query: 299 LQIFFKAQVK-DIYCWNAIISGLALH 323
+K D W A +S +H
Sbjct: 285 WDFIQTMSLKPDATIWGAFLSSCKIH 310
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 92/217 (42%), Gaps = 14/217 (6%)
Query: 15 VRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRI--GFAF 72
V W I GN A+ ++ MQ G + T LLK G C S + G
Sbjct: 93 VVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILG--CLSLLHSGKEV 150
Query: 73 HGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEM 132
HG ++ +V TAL++MYG A ++F + K L +WN ML YA G
Sbjct: 151 HGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRG 210
Query: 133 EDAISLFHMM----PLKDLSSFNILISGYSSCGEVLAARSIFDKMA-----IKDIVSWNS 183
E+ I+ F +M D +F ++S + G V FD M I I +
Sbjct: 211 EEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSC 270
Query: 184 ILSACTRAGDMEKAFALFQEMPMK-NTISWNTMLAGC 219
++ R+G +++A+ Q M +K + W L+ C
Sbjct: 271 MVDLLGRSGYLDEAWDFIQTMSLKPDATIWGAFLSSC 307
>AT2G02980.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:868468-870279 FORWARD
Length = 603
Score = 111 bits (277), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 121/239 (50%), Gaps = 8/239 (3%)
Query: 107 MFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMM----PLKDLSSFNILISGYSSCGE 162
+FE M D+V +NSM Y+ + SLF + L D +F L+ +
Sbjct: 85 LFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKA 144
Query: 163 VLAARSIF---DKMAIKD-IVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAG 218
+ R + K+ + D + ++++ T D++ A +F + + +N M+ G
Sbjct: 145 LEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITG 204
Query: 219 CLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASS 278
+R + +EA+ LF EM+ P+ +T SVLS+CA LGSL+ G IH YA
Sbjct: 205 YARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKY 264
Query: 279 PHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMK 337
V TAL+DM+AKCGS++ A+ IF K + KD W+A+I A HG ++ +F M+
Sbjct: 265 VKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMR 323
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 151/318 (47%), Gaps = 10/318 (3%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTI 77
+N + + + N + +V + G DNYTFP LLKA A G H ++
Sbjct: 97 FNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLHCLSM 156
Query: 78 KTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAIS 137
K G +++V LINMY A +F+ + +V +N+M+ YA +A+S
Sbjct: 157 KLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALS 216
Query: 138 LFHMMPLKDLSSFNI-LISGYSSC---GEVLAARSIF---DKMAIKDIVSWNS-ILSACT 189
LF M K L I L+S SSC G + + I K + V N+ ++
Sbjct: 217 LFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFA 276
Query: 190 RAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATS 249
+ G ++ A ++F++M K+T +W+ M+ G+ +++ +F+ M++ N PD +T
Sbjct: 277 KCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLG 336
Query: 250 VLSACAHLGSLETGIKIHVYAIYS-GLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVK 308
+L+AC+H G +E G K + G+ S +++D+ ++ G++E A + K +
Sbjct: 337 LLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPIS 396
Query: 309 DI-YCWNAIISGLALHGH 325
W +++ + H +
Sbjct: 397 PTPMLWRILLAACSSHNN 414
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 94/189 (49%), Gaps = 3/189 (1%)
Query: 152 ILISGYSSCGEVLAARSIFDKMAIKDIVSWNSILSACTRA---GDMEKAFALFQEMPMKN 208
+LIS +S E++ ++ K I+D+ +++ CT + M A LF+ M +
Sbjct: 34 LLISKCNSLRELMQIQAYAIKSHIEDVSFVAKLINFCTESPTESSMSYARHLFEAMSEPD 93
Query: 209 TISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHV 268
+ +N+M G + E LF E+ LPD T S+L ACA +LE G ++H
Sbjct: 94 IVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLHC 153
Query: 269 YAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYA 328
++ GL + +V L++MY +C ++ A +F + + C+NA+I+G A
Sbjct: 154 LSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNE 213
Query: 329 ALKLFGYMK 337
AL LF M+
Sbjct: 214 ALSLFREMQ 222
>AT5G65570.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:26203968-26206184 FORWARD
Length = 738
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 152/340 (44%), Gaps = 17/340 (5%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
M + WN +I + +++AV Y M + D YT + KA +
Sbjct: 125 MSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEA 184
Query: 70 FAFHGQTIKTGF-YRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYAS 128
HG + G ++FV +AL++MY T +A + + + KD+V +++ Y+
Sbjct: 185 QRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQ 244
Query: 129 NGEMEDAISLFHMMPLKDLSS-----FNILISGYSSCGEV--LAARSIFDKMAIKD---- 177
GE +A+ F M ++ + ++LIS CG + + + + +K
Sbjct: 245 KGEDTEAVKAFQSMLVEKVQPNEYTYASVLIS----CGNLKDIGNGKLIHGLMVKSGFES 300
Query: 178 -IVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMK 236
+ S S+L+ R ++ + +F+ + N +SW ++++G +Q G+ A+ F +M
Sbjct: 301 ALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMM 360
Query: 237 TTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIE 296
+ P+ T +S L C++L E G +IH G + + L+D+Y KCG +
Sbjct: 361 RDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSD 420
Query: 297 QALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYM 336
A +F D+ N +I A +G G AL LF M
Sbjct: 421 MARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERM 460
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 134/307 (43%), Gaps = 16/307 (5%)
Query: 29 GNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTIKTGFYRHIFVQ 88
G +AV + +M V + + YT+ +L + G G HG +K+GF + Q
Sbjct: 246 GEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQ 305
Query: 89 TALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMPLKDL- 147
T+L+ MY D+ ++F+ + + V+W S++ NG E A+ F M +
Sbjct: 306 TSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIK 365
Query: 148 -SSFNI--LISGYSSCGEVLAARSI--------FDKMAIKDIVSWNSILSACTRAGDMEK 196
+SF + + G S+ R I FD+ D + + ++ + G +
Sbjct: 366 PNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDR----DKYAGSGLIDLYGKCGCSDM 421
Query: 197 AFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAH 256
A +F + + IS NTM+ Q G EA+DLF+ M P+ +T SVL AC +
Sbjct: 422 ARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNN 481
Query: 257 LGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAI 316
+E G ++ + + ++D+ + G +E+A + + D+ W +
Sbjct: 482 SRLVEEGCELFDSFRKDKIMLTNDHYACMVDLLGRAGRLEEAEMLTTEVINPDLVLWRTL 541
Query: 317 ISGLALH 323
+S +H
Sbjct: 542 LSACKVH 548
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 115/244 (47%), Gaps = 9/244 (3%)
Query: 104 ACKMFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMM----PLKDLSSFNILISGYSS 159
A ++F+ M + +V WNS++ + ++A+ ++ +M L D + + + +S
Sbjct: 118 ARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSD 177
Query: 160 CG-EVLAARS----IFDKMAIKDIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNT 214
E A RS + + + ++ ++++ + G +A + + K+ +
Sbjct: 178 LSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITA 237
Query: 215 MLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSG 274
++ G Q+G+ +EAV F M P+ T SVL +C +L + G IH + SG
Sbjct: 238 LIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSG 297
Query: 275 LASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFG 334
S+ T+L+ MY +C ++ +L++F + + W ++ISGL +G AL F
Sbjct: 298 FESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFR 357
Query: 335 YMKK 338
M +
Sbjct: 358 KMMR 361
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 85/159 (53%), Gaps = 1/159 (0%)
Query: 179 VSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTT 238
+S + ++ A + GD++ A +F M ++ ++WN+++A ++ + EAV+++ M T
Sbjct: 100 ISGSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITN 159
Query: 239 NCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGL-ASSPHVTTALMDMYAKCGSIEQ 297
N LPD T +SV A + L + + H A+ GL S+ V +AL+DMY K G +
Sbjct: 160 NVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTRE 219
Query: 298 ALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYM 336
A + + + KD+ A+I G + G A+K F M
Sbjct: 220 AKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSM 258
>AT4G14170.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:8176709-8178085 REVERSE
Length = 458
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 155/333 (46%), Gaps = 24/333 (7%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHG-FRADNYTFPILLKAAGKNCASRI 68
MP + WN II + G A +++ ++ M R D++T P++L+A + ++
Sbjct: 74 MPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRACSASREAKS 133
Query: 69 GFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYAS 128
G H +K GF +FV +AL+ MY + A K+F++MPV+D V + +M Y
Sbjct: 134 GDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQ 193
Query: 129 NGEMEDAISLFHMMPLKDLSSFN-ILISGYSSCGEVLAARSIFDKMAIKDIVSW------ 181
GE +++F M + + +++S +CG++ A + K + W
Sbjct: 194 QGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKH------GKSVHGWCIRRCS 247
Query: 182 -------NSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDE 234
N+I + ++ A +F M ++ ISW++++ G G + LFDE
Sbjct: 248 CLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDE 307
Query: 235 MKTTNCLPDYLTATSVLSACAHLGSLETG-IKIHVYAIYSGLASSPHVTTALMDMYAKCG 293
M P+ +T VLSACAH G +E + + Y+ + H + + D ++ G
Sbjct: 308 MLKEGIEPNAVTFLGVLSACAHGGLVEKSWLYFRLMQEYNIVPELKHYAS-VADCMSRAG 366
Query: 294 SIEQALQIFFKAQVK-DIYCWNAIISGLALHGH 325
+E+A + VK D A++SG ++G+
Sbjct: 367 LLEEAEKFLEDMPVKPDEAVMGAVLSGCKVYGN 399
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 128/271 (47%), Gaps = 12/271 (4%)
Query: 79 TGFYRHIFVQTALINMYGTL-HCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAIS 137
T Y ++ + + L+ Y L H + +F +MP +++ +WN ++ ++ +G +I
Sbjct: 41 TFLYSNVVLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSID 100
Query: 138 LFHMMPLK-----DLSSFNILISGYSSCGEVLAARSIFDKMAIKDIVSWNSILSAC---- 188
LF M + D + +++ S+ E + + + +K S + +S+
Sbjct: 101 LFLRMWRESCVRPDDFTLPLILRACSASREAKSG-DLIHVLCLKLGFSSSLFVSSALVIM 159
Query: 189 -TRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTA 247
G + A LF +MP+++++ + M G +Q+G+ + +F EM + D +
Sbjct: 160 YVDMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVM 219
Query: 248 TSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQV 307
S+L AC LG+L+ G +H + I ++ A+ DMY KC ++ A +F
Sbjct: 220 VSLLMACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSR 279
Query: 308 KDIYCWNAIISGLALHGHGYAALKLFGYMKK 338
+D+ W+++I G L G + KLF M K
Sbjct: 280 RDVISWSSLILGYGLDGDVVMSFKLFDEMLK 310
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 121/297 (40%), Gaps = 43/297 (14%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
MP + + + ++ G A + + M GF D+ LL A G+ A + G
Sbjct: 176 MPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHG 235
Query: 70 FAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASN 129
+ HG I+ + + A+ +MY A +F NM +D+++W+S
Sbjct: 236 KSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSS-------- 287
Query: 130 GEMEDAISLFHMMPLKDLSSFNILISGYSSCGEVLAARSIFDKMAIKDI----VSWNSIL 185
LI GY G+V+ + +FD+M + I V++ +L
Sbjct: 288 -----------------------LILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVL 324
Query: 186 SACTRAGDMEKA---FALFQEMPMKNTISWNTMLAGCLQR-GQFSEAVDLFDEMKTTNCL 241
SAC G +EK+ F L QE + + +A C+ R G EA ++M
Sbjct: 325 SACAHGGLVEKSWLYFRLMQEYNIVPELKHYASVADCMSRAGLLEEAEKFLEDMPVK--- 381
Query: 242 PDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQA 298
PD +VLS C G++E G ++ I + + T L +Y+ G ++A
Sbjct: 382 PDEAVMGAVLSGCKVYGNVEVGERVARELIQLKPRKASYYVT-LAGLYSAAGRFDEA 437
>AT3G18840.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:6496198-6498940 FORWARD
Length = 698
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 91/365 (24%), Positives = 147/365 (40%), Gaps = 76/365 (20%)
Query: 49 DNYTFPILLKAAGKNCASRIGFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMF 108
D++T ++K + K G HG +KTG F ++LI+MY + C +F
Sbjct: 124 DDFTVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIF 183
Query: 109 ----------------------------------ENMPVKDLVAWNSMLDAYASNGEMED 134
N + D ++WN+++ YA NG E+
Sbjct: 184 NGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEE 243
Query: 135 AISL----------------------------------FHMMPLKDLSSFNILISG---- 156
A+ + H LK+ S N +S
Sbjct: 244 ALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVD 303
Query: 157 -YSSCGEVLAARSIFDKMAIKDIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTM 215
Y CG + A S ++ S +S++ + G M +A LF + KN + W M
Sbjct: 304 VYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAM 363
Query: 216 LAGCLQRGQFSEAVDLFDEM--KTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYS 273
G L Q ++L TN PD L SVL AC+ +E G +IH +++ +
Sbjct: 364 FLGYLNLRQPDSVLELARAFIANETNT-PDSLVMVSVLGACSLQAYMEPGKEIHGHSLRT 422
Query: 274 GLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLF 333
G+ + TA +DMY+KCG++E A +IF + +D +NA+I+G A HGH + + F
Sbjct: 423 GILMDKKLVTAFVDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHF 482
Query: 334 GYMKK 338
M +
Sbjct: 483 EDMTE 487
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 143/298 (47%), Gaps = 47/298 (15%)
Query: 83 RHIFVQTALINMYGTLHCTADACKMFENMPV-KDLVAWNSMLDAYA-SNGEMEDAISLFH 140
R+++ A+I Y + +A ++FE+ +DL+ +N++L +A ++G +AI +F
Sbjct: 52 RNVYSWNAVIAAYVKFNNVKEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFG 111
Query: 141 MMPLKD-----LSSFNI-------------------------------------LISGYS 158
M K+ + F + LI YS
Sbjct: 112 EMHRKEKDDIWIDDFTVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYS 171
Query: 159 SCGEVLAARSIFDKMAIK--DIVSWNSILSACTRAGDMEKAFALFQEMP-MKNTISWNTM 215
CG+ +IF+ ++ D V+ N++++A R GD++KA ++F P + +TISWNT+
Sbjct: 172 KCGKFKEVCNIFNGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTL 231
Query: 216 LAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGL 275
+AG Q G EA+ + M+ D + +VL+ + L SL+ G ++H + +G
Sbjct: 232 IAGYAQNGYEEEALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGS 291
Query: 276 ASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLF 333
S+ V++ ++D+Y KCG+++ A ++Y +++I G + G A +LF
Sbjct: 292 YSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLF 349
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 148/335 (44%), Gaps = 61/335 (18%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTI 77
WN +I + G E+A+ V+M+ +G + D ++F +L + +IG H + +
Sbjct: 228 WNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVL 287
Query: 78 KTGFYRHIFVQTALINMYGTLHCTADACKMFENMPV----KDLVAWNSMLDAYASNGEME 133
K G Y + FV + ++++Y C K E+ + +L + +SM+ Y+S G+M
Sbjct: 288 KNGSYSNKFVSSGIVDVY----CKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMV 343
Query: 134 DAISLFHMMPLKDLSSFNILISGYSSCGE-----VLAARSIFDKMAIKDIVSWNSILSAC 188
+A LF + K+L + + GY + + LA I ++ D + S+L AC
Sbjct: 344 EAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIANETNTPDSLVMVSVLGAC 403
Query: 189 T-----------------------------------RAGDMEKAFALFQEMPMKNTISWN 213
+ + G++E A +F ++T+ +N
Sbjct: 404 SLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERIFDSSFERDTVMYN 463
Query: 214 TMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIK-----IHV 268
M+AGC G +++ F++M PD +T ++LSAC H G + G K I
Sbjct: 464 AMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEA 523
Query: 269 YAIYSGLASSPHVT--TALMDMYAKCGSIEQALQI 301
Y I SP T ++D+Y K +++A+++
Sbjct: 524 YNI------SPETGHYTCMIDLYGKAYRLDKAIEL 552
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 122/239 (51%), Gaps = 44/239 (18%)
Query: 138 LFHMMPLKDLSSF-----NILISGYSSCGEVLAARSIFDKMAIKDIVSWNSILSACTRAG 192
L H+ +K S+ N L++ YS G + AR++FD+M +++ SWN++++A +
Sbjct: 9 LHHIRSIKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVKFN 68
Query: 193 DMEKAFALFQ-EMPMKNTISWNTMLAGCLQ-RGQFSEAVDLFDEM---KTTNCLPDYLTA 247
++++A LF+ + ++ I++NT+L+G + G SEA+++F EM + + D T
Sbjct: 69 NVKEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTV 128
Query: 248 TSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKC--------------- 292
T+++ A L ++ G ++H + +G + ++L+ MY+KC
Sbjct: 129 TTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCV 188
Query: 293 ------------------GSIEQALQIFFK-AQVKDIYCWNAIISGLALHGHGYAALKL 332
G I++AL +F++ ++ D WN +I+G A +G+ ALK+
Sbjct: 189 EFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKM 247
>AT1G03510.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:876258-877547 REVERSE
Length = 429
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 105/188 (55%), Gaps = 4/188 (2%)
Query: 153 LISGYSSCGEVLAARSIFDKMAIKDIVSWNSILSACTRAGDMEKAFALFQEMP-MKNTIS 211
L+ Y C V AR +FD++ ++ V WN+++S T G +++A L++ M M N S
Sbjct: 89 LLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYEAMDVMPNESS 148
Query: 212 WNTMLAGCL--QRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVY 269
+N ++ G + + G + A++ + +M P+ +T +++SAC+ +G+ +IH Y
Sbjct: 149 FNAIIKGLVGTEDGSY-RAIEFYRKMIEFRFKPNLITLLALVSACSAIGAFRLIKEIHSY 207
Query: 270 AIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAA 329
A + + P + + L++ Y +CGSI +F + +D+ W+++IS ALHG +A
Sbjct: 208 AFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALHGDAESA 267
Query: 330 LKLFGYMK 337
LK F M+
Sbjct: 268 LKTFQEME 275
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/317 (23%), Positives = 144/317 (45%), Gaps = 45/317 (14%)
Query: 29 GNAEQAVLTYVNMQVH-GFRADNYTFPILLKAAGKNCASRIGFAFHGQTIKTGFYRHIFV 87
GN EQA+ ++ M D + F + LK+ +G + H ++K+ F + FV
Sbjct: 26 GNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVHAHSVKSNFLSNPFV 85
Query: 88 QTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMP-LKD 146
AL++MYG + A K+F+ +P ++ V WN+M+ Y G++++A+ L+ M + +
Sbjct: 86 GCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYEAMDVMPN 145
Query: 147 LSSFNILISG---------------------------------YSSCGEVLAARSIFD-- 171
SSFN +I G S+C + A R I +
Sbjct: 146 ESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIGAFRLIKEIH 205
Query: 172 KMAIKDIVS-----WNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFS 226
A ++++ + ++ A R G + +F M ++ ++W+++++ G
Sbjct: 206 SYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALHGDAE 265
Query: 227 EAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYS--GLASSPHVTTA 284
A+ F EM+ PD + +VL AC+H G + + ++ + GL +S +
Sbjct: 266 SALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEAL-VYFKRMQGDYGLRASKDHYSC 324
Query: 285 LMDMYAKCGSIEQALQI 301
L+D+ ++ G E+A ++
Sbjct: 325 LVDVLSRVGRFEEAYKV 341
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 100/223 (44%), Gaps = 21/223 (9%)
Query: 18 WNEIIKKHMLVGNAE---QAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHG 74
+N IIK LVG + +A+ Y M F+ + T L+ A A R+ H
Sbjct: 149 FNAIIKG--LVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIGAFRLIKEIHS 206
Query: 75 QTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMED 134
+ H +++ L+ YG +F++M +D+VAW+S++ AYA +G+ E
Sbjct: 207 YAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALHGDAES 266
Query: 135 AISLFHMMPL-----KDLSSFNILISGYSSCGEVLAARSIFDKM-------AIKDIVSWN 182
A+ F M L D++ N+L S G A F +M A KD ++
Sbjct: 267 ALKTFQEMELAKVTPDDIAFLNVL-KACSHAGLADEALVYFKRMQGDYGLRASKD--HYS 323
Query: 183 SILSACTRAGDMEKAFALFQEMPMKNTI-SWNTMLAGCLQRGQ 224
++ +R G E+A+ + Q MP K T +W +L C G+
Sbjct: 324 CLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGE 366
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 65/128 (50%), Gaps = 1/128 (0%)
Query: 210 ISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLP-DYLTATSVLSACAHLGSLETGIKIHV 268
IS L+ +G +A++LF +M ++ LP D + L +CA G +H
Sbjct: 13 ISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVHA 72
Query: 269 YAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYA 328
+++ S S+P V AL+DMY KC S+ A ++F + ++ WNA+IS G
Sbjct: 73 HSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKE 132
Query: 329 ALKLFGYM 336
A++L+ M
Sbjct: 133 AVELYEAM 140
>AT5G42450.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:16977660-16978850 FORWARD
Length = 396
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 136/300 (45%), Gaps = 52/300 (17%)
Query: 80 GFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAISLF 139
G ++FV +A++N Y L DA + F++ ++V+ +++ Y E E+A+SLF
Sbjct: 2 GLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSITNLISGYLKKHEFEEALSLF 61
Query: 140 HMMPLKDLSSFNILISGYSSCGEVLAARSIFDKM------------------AIKDIVS- 180
MP + + ++N +I G+S G A + F M AI +I S
Sbjct: 62 RAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITAISNIASH 121
Query: 181 ----------------------WNSILSACTRAGDMEKAFALFQ--EMPMKNTISWNTML 216
WNS++S ++ G+ME + F E +N +SWN+M+
Sbjct: 122 GAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMI 181
Query: 217 AGCLQRGQFSEAVDLFDEM-KTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYS-- 273
G G+ EAV +F++M K TN P+ +T VL AC H G ++ G A+
Sbjct: 182 WGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACNHAGLIQEGYMYFNKAVNDYD 241
Query: 274 --GLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKD--IYCWNAIISGLALHGHGYAA 329
L H ++DM ++ G ++A ++ K+ D I W A++ G +H + A
Sbjct: 242 DPNLLELEHY-ACMVDMLSRSGRFKEAEEL-IKSMPLDPGIGFWKALLGGCQIHSNKRLA 299
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 103/190 (54%), Gaps = 4/190 (2%)
Query: 153 LISGYSSCGEVLAARSIFDKMAIKDIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISW 212
+++ Y + AR FD ++VS +++S + + E+A +LF+ MP ++ ++W
Sbjct: 13 VLNCYVKLSTLTDARRCFDDTRDPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTW 72
Query: 213 NTMLAGCLQRGQFSEAVDLF-DEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAI 271
N ++ G Q G+ EAV+ F D ++ +P+ T ++A +++ S G IH AI
Sbjct: 73 NAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITAISNIASHGAGKSIHACAI 132
Query: 272 -YSGLASSPHVTTALMDMYAKCGSIEQALQIFFK--AQVKDIYCWNAIISGLALHGHGYA 328
+ G + V +L+ Y+KCG++E +L F K + ++I WN++I G A +G G
Sbjct: 133 KFLGKRFNVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEE 192
Query: 329 ALKLFGYMKK 338
A+ +F M K
Sbjct: 193 AVAMFEKMVK 202
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 104/229 (45%), Gaps = 21/229 (9%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNY-TFPILLKAAGKNCASRI 68
MP V WN +I G E+AV T+V+M G N TFP + A +
Sbjct: 64 MPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITAISNIASHGA 123
Query: 69 GFAFHGQTIK-TGFYRHIFVQTALINMYGTLHCTADACKMFENM--PVKDLVAWNSMLDA 125
G + H IK G ++FV +LI+ Y D+ F + +++V+WNSM+
Sbjct: 124 GKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWG 183
Query: 126 YASNGEMEDAISLFHMMPLKD--LSSFNILISGY----SSCGEVLAARSIFDKMAIKDIV 179
YA NG E+A+++F M +KD L N+ I G + G + F+K A+ D
Sbjct: 184 YAHNGRGEEAVAMFEKM-VKDTNLRPNNVTILGVLFACNHAGLIQEGYMYFNK-AVNDYD 241
Query: 180 SWN--------SILSACTRAGDMEKAFALFQEMPMKNTIS-WNTMLAGC 219
N ++ +R+G ++A L + MP+ I W +L GC
Sbjct: 242 DPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLDPGIGFWKALLGGC 290
>AT5G02860.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:654102-656561 FORWARD
Length = 819
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 147/312 (47%), Gaps = 19/312 (6%)
Query: 41 MQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTIKTGFYRHIFVQTALINMYGTLHC 100
M+ G D YT+ L+ + + + GF AL+++YG H
Sbjct: 270 MKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHR 329
Query: 101 TADACKMFENMPVK----DLVAWNSMLDAYASNGEMEDAISLFHMMPLK----DLSSFNI 152
+A K+ M + +V +NS++ AYA +G +++A+ L + M K D+ ++
Sbjct: 330 PKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTT 389
Query: 153 LISGYSSCGEVLAARSIFDKMA----IKDIVSWNSILSACTRAGDMEKAFALFQEMPM-- 206
L+SG+ G+V +A SIF++M +I ++N+ + G + +F E+ +
Sbjct: 390 LLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCG 449
Query: 207 --KNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGI 264
+ ++WNT+LA Q G SE +F EMK +P+ T +++SA + GS E +
Sbjct: 450 LSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAM 509
Query: 265 KIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHG 324
++ + +G+ ++ A+ G EQ+ ++ A+++D C ++ +L
Sbjct: 510 TVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVL--AEMEDGRCKPNELTYCSLL- 566
Query: 325 HGYAALKLFGYM 336
H YA K G M
Sbjct: 567 HAYANGKEIGLM 578
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/370 (21%), Positives = 153/370 (41%), Gaps = 66/370 (17%)
Query: 29 GNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTIKTGFYRHIFVQ 88
G A + +Q GF D Y++ L+ A + R + + G +
Sbjct: 187 GRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITY 246
Query: 89 TALINMYGTLHCT------------------------------------ADACKMFENMP 112
++N++G + +A ++FE M
Sbjct: 247 NVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMK 306
Query: 113 VK----DLVAWNSMLDAYASNGEMEDAISLFHMMPLKDLS----SFNILISGYSSCGEVL 164
D V +N++LD Y + ++A+ + + M L S ++N LIS Y+ G +
Sbjct: 307 AAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLD 366
Query: 165 AARSIFDKMAIK----DIVSWNSILSACTRAGDMEKAFALFQEMP----MKNTISWNTML 216
A + ++MA K D+ ++ ++LS RAG +E A ++F+EM N ++N +
Sbjct: 367 EAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFI 426
Query: 217 AGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIY---- 272
RG+F+E + +FDE+ PD +T ++L+ + G+ V ++
Sbjct: 427 KMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFG-----QNGMDSEVSGVFKEMK 481
Query: 273 -SGLASSPHVTTALMDMYAKCGSIEQALQIFFK----AQVKDIYCWNAIISGLALHGHGY 327
+G L+ Y++CGS EQA+ ++ + D+ +N +++ LA G
Sbjct: 482 RAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWE 541
Query: 328 AALKLFGYMK 337
+ K+ M+
Sbjct: 542 QSEKVLAEME 551
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 85/389 (21%), Positives = 149/389 (38%), Gaps = 57/389 (14%)
Query: 4 LVCNCFMPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKN 63
+V N F PS+ +N +I + G ++A+ M G + D +T+ LL +
Sbjct: 340 MVLNGFSPSIVT--YNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERA 397
Query: 64 CASRIGFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPV----KDLVAW 119
+ + G +I A I MYG + K+F+ + V D+V W
Sbjct: 398 GKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTW 457
Query: 120 NSMLDAYASNGEMEDAISLFHMMP----LKDLSSFNILISGYSSCGEVLAARSIFDKM-- 173
N++L + NG + +F M + + +FN LIS YS CG A +++ +M
Sbjct: 458 NTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLD 517
Query: 174 --AIKDIVSWNSILSACTRAGDMEKAFALFQEMP----MKNTISW--------------- 212
D+ ++N++L+A R G E++ + EM N +++
Sbjct: 518 AGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGL 577
Query: 213 --------------------NTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLS 252
T++ C + EA F E+K PD T S++S
Sbjct: 578 MHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVS 637
Query: 253 ACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKC---GSIEQAL-QIFFKAQVK 308
+ + Y G S +LM M+++ G E+ L +I K
Sbjct: 638 IYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKP 697
Query: 309 DIYCWNAIISGLALHGHGYAALKLFGYMK 337
DI +N +I + A ++F M+
Sbjct: 698 DIISYNTVIYAYCRNTRMRDASRIFSEMR 726
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 77/161 (47%), Gaps = 8/161 (4%)
Query: 146 DLSSFNILISGYSSCGEVLAARSIFDKMAIK----DIVSWNSILSACTRAGDMEKAFALF 201
D+++ N ++S Y V A + D M + + ++NS++ +R+ D K+ +
Sbjct: 628 DITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEIL 687
Query: 202 QEMPMK----NTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHL 257
+E+ K + IS+NT++ + + +A +F EM+ + +PD +T + + + A
Sbjct: 688 REILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAAD 747
Query: 258 GSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQA 298
E I + Y I G + + +++D Y K ++A
Sbjct: 748 SMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEA 788
>AT5G61990.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:24900186-24903110 REVERSE
Length = 974
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 130/274 (47%), Gaps = 27/274 (9%)
Query: 89 TALINMYGTLHCTADACKMFENMP----VKDLVAWNSMLDAYASNGEMEDAISLFHMMPL 144
T LIN Y +AC + +M + D + +++ N +++DA +F M
Sbjct: 561 TGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRG 620
Query: 145 K----DLSSFNILISGYSSCGEVLAARSIFDKMA----IKDIVSWNSILSACTRAGDMEK 196
K D+ S+ +LI+G+S G + A SIFD+M +++ +N +L R+G++EK
Sbjct: 621 KGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEK 680
Query: 197 AFALFQEMPMK----NTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLS 252
A L EM +K N +++ T++ G + G +EA LFDEMK +PD T+++
Sbjct: 681 AKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVD 740
Query: 253 ACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFK-------- 304
C L +E I I G ASS AL++ K G E ++ +
Sbjct: 741 GCCRLNDVERAITIF-GTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDR 799
Query: 305 -AQVKDIYCWNAIISGLALHGHGYAALKLFGYMK 337
+ D+ +N +I L G+ AA +LF M+
Sbjct: 800 FGKPNDV-TYNIMIDYLCKEGNLEAAKELFHQMQ 832
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/337 (19%), Positives = 132/337 (39%), Gaps = 62/337 (18%)
Query: 24 KHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTIKTGFYR 83
K+ V +AE+ + M+ G D +++ +L+ K + + + ++ G
Sbjct: 604 KNDKVDDAEE---IFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTP 660
Query: 84 HIFVQTALINMYGTLHCTADACKMFENMPVKDL----VAWNSMLDAYASNGEMEDAISLF 139
++ + L+ + A ++ + M VK L V + +++D Y +G++ +A LF
Sbjct: 661 NVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLF 720
Query: 140 HMMPLKDLSS----FNILISGYSSCGEVLAARSIF------------------------- 170
M LK L + L+ G +V A +IF
Sbjct: 721 DEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFG 780
Query: 171 -----------------DKMAIKDIVSWNSILSACTRAGDMEKAFALFQEMP----MKNT 209
D+ + V++N ++ + G++E A LF +M M
Sbjct: 781 KTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTV 840
Query: 210 ISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKI--- 266
I++ ++L G + G+ +E +FDE PD++ + +++A G + +
Sbjct: 841 ITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQ 900
Query: 267 --HVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQI 301
A+ G S AL+ +AK G +E A ++
Sbjct: 901 MFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKV 937
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 70/366 (19%), Positives = 139/366 (37%), Gaps = 67/366 (18%)
Query: 32 EQAVLTYVNMQVHGFRADNYTFPILLKA--AGKNCASRIGFAF----HGQTIKTGFYRHI 85
E A V M G DN+T+ +L+ G+N + G HG IK Y
Sbjct: 294 EDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCC 353
Query: 86 FVQTALINMYGTLHCTADACKMFENMPVKDLV----AWNSMLDAYASNGEMEDAISLFHM 141
+++ G + A +F+ M L+ A+ S+++ Y + L
Sbjct: 354 I---CVMSKEGVME---KAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVE 407
Query: 142 MPLKDLS----SFNILISGYSSCGEVLAARSIFDKMA--------------IK------- 176
M +++ ++ ++ G S G++ A +I +M IK
Sbjct: 408 MKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSR 467
Query: 177 ------------------DIVSWNSILSACTRAGDMEKAFALFQEMP----MKNTISWNT 214
DI +NS++ ++A M++A + EM N ++
Sbjct: 468 FGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGA 527
Query: 215 MLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSG 274
++G ++ +F+ A EM+ LP+ + T +++ G + + + G
Sbjct: 528 FISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQG 587
Query: 275 LASSPHVTTALMDMYAKCGSIEQALQIFFKAQVK----DIYCWNAIISGLALHGHGYAAL 330
+ T LM+ K ++ A +IF + + K D++ + +I+G + G+ A
Sbjct: 588 ILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKAS 647
Query: 331 KLFGYM 336
+F M
Sbjct: 648 SIFDEM 653
>AT3G14330.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4779688-4782451 REVERSE
Length = 710
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 139/312 (44%), Gaps = 20/312 (6%)
Query: 29 GNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTIKTGFYRHIFVQ 88
G+ A++ YV+M N++ + LKA R+G H Q +K V
Sbjct: 215 GSPRDALIVYVDMLCSFIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVY 274
Query: 89 TALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMPLKDLS 148
L+ +Y DA K+F+ M +++V WNS++ + + + +LF M + +
Sbjct: 275 NVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIG 334
Query: 149 -SFNILISGYSSCGEVLAARS-------IFDKMAIKDIVSWNSILSACTRAGDMEKAFAL 200
S+ L + +C V A + I D+ NS++ + G++E + +
Sbjct: 335 FSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRV 394
Query: 201 FQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSL 260
F M K+ SWN ML G E ++LF+ M + PD +T ++LS C+ G
Sbjct: 395 FDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLT 454
Query: 261 ETGIKIHVYAIYSGLASSPHVTTA------LMDMYAKCGSIEQALQIFFKAQVK-DIYCW 313
E G+ +++ + + V+ A L+D+ + G I++A+++ K W
Sbjct: 455 EYGL-----SLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIW 509
Query: 314 NAIISGLALHGH 325
++++ LHG+
Sbjct: 510 GSLLNSCRLHGN 521
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 124/259 (47%), Gaps = 11/259 (4%)
Query: 89 TALINMYGTLHCTADACKMFENMPVKDLVA---WNSMLDAYASNGEMEDAISLFHMMPLK 145
+ LI ++ A K+F+++ L+ W +M Y+ NG DA+ ++ M
Sbjct: 171 SKLITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCS 230
Query: 146 DLSSFNILIS-GYSSCGEVLAAR-------SIFDKMAIKDIVSWNSILSACTRAGDMEKA 197
+ N IS +C ++ R I + D V +N +L +G + A
Sbjct: 231 FIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDA 290
Query: 198 FALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHL 257
+F M +N ++WN++++ ++ + E +LF +M+ + T T++L AC+ +
Sbjct: 291 RKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRV 350
Query: 258 GSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAII 317
+L TG +IH + S + +LMDMY KCG +E + ++F KD+ WN ++
Sbjct: 351 AALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIML 410
Query: 318 SGLALHGHGYAALKLFGYM 336
+ A++G+ + LF +M
Sbjct: 411 NCYAINGNIEEVINLFEWM 429
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 90/185 (48%), Gaps = 10/185 (5%)
Query: 52 TFPILLKAAGKNCASRIGFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENM 111
T +L A + A G H Q +K+ + + +L++MYG + ++F+ M
Sbjct: 339 TLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVM 398
Query: 112 PVKDLVAWNSMLDAYASNGEMEDAISLFHMM----PLKDLSSFNILISGYSSCGEVLAAR 167
KDL +WN ML+ YA NG +E+ I+LF M D +F L+SG S G
Sbjct: 399 LTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGL 458
Query: 168 SIFDKMAIKDIVS-----WNSILSACTRAGDMEKAFALFQEMPMKNTIS-WNTMLAGCLQ 221
S+F++M + VS + ++ RAG +++A + + MP K + S W ++L C
Sbjct: 459 SLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRL 518
Query: 222 RGQFS 226
G S
Sbjct: 519 HGNVS 523
>AT5G43790.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:17592099-17593481 REVERSE
Length = 460
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/349 (25%), Positives = 166/349 (47%), Gaps = 32/349 (9%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTY------VNMQVHGFRADNYTFPILLKAAGKN 63
+P+ V +N +I + N+ Q L + ++ + + R + +T+P L KA+G +
Sbjct: 66 IPNPSVFLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKASGFD 125
Query: 64 CA-SRIGFAFHGQTIKTGFYRHI----FVQTALINMYGTLHCTADACKMFENMPVKDLVA 118
R G A H +K F + FVQ AL+ Y +A +FE + DL
Sbjct: 126 AQWHRHGRALHAHVLK--FLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLAT 183
Query: 119 WNSMLDAYASNGEM---EDAISLFHMMPLK-DLSSFNILISGYSSCGEVLAARSIFDKM- 173
WN++L AYA++ E+ E+ + LF M ++ + S LI ++ GE + R ++ +
Sbjct: 184 WNTLLAAYANSEEIDSDEEVLLLFMRMQVRPNELSLVALIKSCANLGEFV--RGVWAHVY 241
Query: 174 AIKDIVSWN-----SILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEA 228
+K+ ++ N S++ ++ G + A +F EM ++ +N M+ G G E
Sbjct: 242 VLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEG 301
Query: 229 VDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKI--HVYAIYSGLASSPHVTTALM 286
++L+ + + +PD T +SAC+H G ++ G++I + A+Y G+ L+
Sbjct: 302 IELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVY-GIEPKVEHYGCLV 360
Query: 287 DMYAKCGSIEQALQIFFKAQVK-DIYCWNAIISGLALHG---HGYAALK 331
D+ + G +E+A + K VK + W + + HG G ALK
Sbjct: 361 DLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGSSQTHGDFERGEIALK 409
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 136/282 (48%), Gaps = 26/282 (9%)
Query: 73 HGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASN--- 129
H Q I G H + + L+++ T+ C + A + +P + +N+++ + SN
Sbjct: 29 HAQIITIGLSHHTYPLSKLLHLSSTV-CLSYALSILRQIPNPSVFLYNTLISSIVSNHNS 87
Query: 130 GEMEDAISLFHMMPLKDLSSFN----------ILISGYSSC----GEVLAARSI-FDKMA 174
+ A SL+ + L S+F SG+ + G L A + F +
Sbjct: 88 TQTHLAFSLYDQI-LSSRSNFVRPNEFTYPSLFKASGFDAQWHRHGRALHAHVLKFLEPV 146
Query: 175 IKDIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQF---SEAVDL 231
D +++ G + +A +LF+ + + +WNT+LA + E + L
Sbjct: 147 NHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAAYANSEEIDSDEEVLLL 206
Query: 232 FDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAK 291
F M+ P+ L+ +++ +CA+LG G+ HVY + + L + V T+L+D+Y+K
Sbjct: 207 FMRMQVR---PNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSK 263
Query: 292 CGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLF 333
CG + A ++F + +D+ C+NA+I GLA+HG G ++L+
Sbjct: 264 CGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELY 305
>AT3G28640.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:10731518-10732723 REVERSE
Length = 401
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 83/143 (58%), Gaps = 1/143 (0%)
Query: 197 AFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAH 256
A +F E+P + + W+ ++ G ++ G SE +++F EM PD + T+ L+ACA
Sbjct: 68 ARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQ 127
Query: 257 LGSLETGIKIHVYAIY-SGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNA 315
+G+L G IH + S + S V TAL+DMYAKCG IE A+++F K ++++ W A
Sbjct: 128 VGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAA 187
Query: 316 IISGLALHGHGYAALKLFGYMKK 338
+I G A +G+ A+ +++
Sbjct: 188 LIGGYAAYGYAKKAMTCLERLER 210
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 132/286 (46%), Gaps = 15/286 (5%)
Query: 52 TFPILLKAAGKNCASRIGFAFHGQTIKTG-FYRHIFVQTALINMYGTLHCTADACKMFEN 110
TF L+ A K C +G H +K G F VQT ++ +Y DA K+F+
Sbjct: 15 TFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDE 74
Query: 111 MPVKDLVAWNSMLDAYASNGEMEDAISLFHMMPLKDLS----SFNILISGYSSCGEVLAA 166
+P D+V W+ +++ Y G + + +F M +K L S ++ + G +
Sbjct: 75 IPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQG 134
Query: 167 RSIFDKMAIK-----DIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQ 221
+ I + + K D+ +++ + G +E A +F+++ +N SW ++ G
Sbjct: 135 KWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAA 194
Query: 222 RGQFSEAVDLFDEMKTTNCL-PDYLTATSVLSACAHLGSLETGIKI--HVYAIYSGLASS 278
G +A+ + ++ + + PD + VL+ACAH G LE G + ++ A Y
Sbjct: 195 YGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKH 254
Query: 279 PHVTTALMDMYAKCGSIEQALQIFFKAQVKDI-YCWNAIISGLALH 323
H + ++D+ + G ++ AL + K +K + W A+++G H
Sbjct: 255 EHY-SCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCRTH 299
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 105/222 (47%), Gaps = 12/222 (5%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
+P +V +W+ ++ ++ G + + + M V G D ++ L A + A G
Sbjct: 75 IPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQG 134
Query: 70 FAFHGQTIKTGFYR-HIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYAS 128
H K + +FV TAL++MY C A ++F+ + +++ +W +++ YA+
Sbjct: 135 KWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAA 194
Query: 129 NGEMEDAISLFHMMPLKDLSSFN--ILISGYSSC---GEVLAARSIFDKMAIKDIVS--- 180
G + A++ + +D + +L+ ++C G + RS+ + M + ++
Sbjct: 195 YGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKH 254
Query: 181 --WNSILSACTRAGDMEKAFALFQEMPMKNTIS-WNTMLAGC 219
++ I+ RAG ++ A L ++MPMK S W +L GC
Sbjct: 255 EHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGC 296
>AT1G62720.1 | Symbols: | INVOLVED IN: biological_process unknown;
LOCATED IN: cellular_component unknown; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G62680.1); Has 25425
Blast hits to 6071 proteins in 187 species: Archae - 4;
Bacteria - 14; Metazoa - 596; Fungi - 591; Plants -
23031; Viruses - 0; Other Eukaryotes - 1189 (source:
NCBI BLink). | chr1:23227574-23229031 FORWARD
Length = 485
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/345 (21%), Positives = 156/345 (45%), Gaps = 17/345 (4%)
Query: 11 PSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGF 70
P + +++++ K N + + + +M+V G D Y++ I++ + I
Sbjct: 65 PLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIAL 124
Query: 71 AFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMP----VKDLVAWNSMLDAY 126
+ G+ +K G+ + ++LIN + + DA + M D+V +N+++D
Sbjct: 125 SVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGS 184
Query: 127 ASNGEMEDAISLFHMMPLK----DLSSFNILISGYSSCGEVLAARSIFDKMAIKDIV--- 179
G + DA+ LF M D ++N L++G G A + M ++DIV
Sbjct: 185 CKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNV 244
Query: 180 -SWNSILSACTRAGDMEKAFALFQEMPMK----NTISWNTMLAGCLQRGQFSEAVDLFDE 234
++ +++ + G +A L++EM + + ++N+++ G G+ EA + D
Sbjct: 245 ITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDL 304
Query: 235 MKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGS 294
M T CLPD +T ++++ ++ G K+ GL ++ Y + G
Sbjct: 305 MVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGR 364
Query: 295 IEQALQIFFKAQVK-DIYCWNAIISGLALHGHGYAALKLFGYMKK 338
+ A +IF + + +I ++ ++ GL ++ AL LF M+K
Sbjct: 365 PDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQK 409
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 122/248 (49%), Gaps = 16/248 (6%)
Query: 105 CKMFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMPL----KDLSSFNILISGYSSC 160
CKM ++ P+ +V ++ +L A + + ISLFH M + DL S+NI+I+ C
Sbjct: 58 CKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRC 117
Query: 161 GEVLAARSIFDKMAI----KDIVSWNSILSACTRAGDMEKAFALFQEMP----MKNTISW 212
+ A S+ KM D+V+ +S+++ + + A L +M + + +
Sbjct: 118 SRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIY 177
Query: 213 NTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIY 272
NT++ G + G ++AV+LFD M+ D +T S+++ G ++ +
Sbjct: 178 NTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVM 237
Query: 273 SGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVK----DIYCWNAIISGLALHGHGYA 328
+ + TA++D++ K G +A++++ + + D++ +N++I+GL +HG
Sbjct: 238 RDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDE 297
Query: 329 ALKLFGYM 336
A ++ M
Sbjct: 298 AKQMLDLM 305
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/295 (22%), Positives = 126/295 (42%), Gaps = 54/295 (18%)
Query: 9 FMPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRI 68
F P + + +N II +G AV + M+ G RAD T+ L+ AG C+ R
Sbjct: 170 FRPDVVI--YNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLV--AGLCCSGRW 225
Query: 69 GFA--FHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVK----DLVAWNSM 122
A + ++ TA+I+++ ++A K++E M + D+ +NS+
Sbjct: 226 SDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSL 285
Query: 123 LDAYASNGEMEDAISLFHMMPLK----DLSSFNILISGYSSCGEVLAARSIFDKMA---- 174
++ +G +++A + +M K D+ ++N LI+G+ V +F +MA
Sbjct: 286 INGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGL 345
Query: 175 IKDIVSWNSILSACTRAGD--------------------------------MEKAFALFQ 202
+ D +++N+I+ +AG +EKA LF+
Sbjct: 346 VGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFE 405
Query: 203 EMPMK----NTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSA 253
M + ++N ++ G + G +A DLF + PD ++ T+++S
Sbjct: 406 NMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISG 460
>AT5G50990.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 6 plant
structures; EXPRESSED DURING: F mature embryo stage,
petal differentiation and expansion stage, D bilateral
stage, E expanded cotyledon stage; CONTAINS InterPro
DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885);
BEST Arabidopsis thaliana protein match is: binding
(TAIR:AT3G62890.1); Has 13116 Blast hits to 4886
proteins in 160 species: Archae - 0; Bacteria - 0;
Metazoa - 67; Fungi - 72; Plants - 12769; Viruses - 0;
Other Eukaryotes - 208 (source: NCBI BLink). |
chr5:20739453-20741281 FORWARD
Length = 534
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 88/157 (56%), Gaps = 1/157 (0%)
Query: 182 NSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKT-TNC 240
N I+ + + G+ A + + +N I+WN M+ G ++ Q+ EA+ M + T+
Sbjct: 102 NLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDI 161
Query: 241 LPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQ 300
P+ + S L+ACA LG L +H I SG+ + +++AL+D+YAKCG I + +
Sbjct: 162 KPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSRE 221
Query: 301 IFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMK 337
+F+ + D+ WNA+I+G A HG A+++F M+
Sbjct: 222 VFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEME 258
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 114/233 (48%), Gaps = 25/233 (10%)
Query: 104 ACKMFENMPVKDLVAWNSMLDAYASNGEMEDAI-SLFHMMPLKDLS----SFNILISGYS 158
A K+ N ++++ WN M+ Y N + E+A+ +L +M+ D+ SF ++ +
Sbjct: 117 AKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACA 176
Query: 159 SCGEVLAARSIFDKMAIKDIVSWNSILSAC-----TRAGDMEKAFALFQEMPMKNTISWN 213
G++ A+ + M I + N+ILS+ + GD+ + +F + + WN
Sbjct: 177 RLGDLHHAKWVHSLM-IDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWN 235
Query: 214 TMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYS 273
M+ G G +EA+ +F EM+ + PD +T +L+ C+H G LE G + Y
Sbjct: 236 AMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKE------YF 289
Query: 274 GLAS-----SPHVT--TALMDMYAKCGSIEQALQIFFKAQVK-DIYCWNAIIS 318
GL S P + A++D+ + G +++A ++ ++ D+ W +++S
Sbjct: 290 GLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLS 342
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 105/216 (48%), Gaps = 21/216 (9%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNM-QVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQ- 75
WN +I ++ E+A+ NM + + ++F L A CA R+G H +
Sbjct: 132 WNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAA----CA-RLGDLHHAKW 186
Query: 76 ----TIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGE 131
I +G + + +AL+++Y + ++F ++ D+ WN+M+ +A++G
Sbjct: 187 VHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGL 246
Query: 132 MEDAISLFHMMPLKDLSSFNI----LISGYSSCGEVLAARSIFDKMAIK-----DIVSWN 182
+AI +F M + +S +I L++ S CG + + F M+ + + +
Sbjct: 247 ATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYG 306
Query: 183 SILSACTRAGDMEKAFALFQEMPMK-NTISWNTMLA 217
+++ RAG +++A+ L + MP++ + + W ++L+
Sbjct: 307 AMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLS 342
>AT2G31400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:13387201-13390550 REVERSE
Length = 918
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 137/279 (49%), Gaps = 21/279 (7%)
Query: 80 GFYRHIFVQTALINMYGTLHCTADACKMFENMP----VKDLVAWNSMLDAYASNG-EMED 134
G+ ++ +ALI+ YG +A +F +M +LV +N+++DA G E +
Sbjct: 263 GYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQ 322
Query: 135 AISLFHMMPLK----DLSSFNILISGYSSCGEVLAARSIFDKMAIK----DIVSWNSILS 186
F M D +FN L++ S G AAR++FD+M + D+ S+N++L
Sbjct: 323 VAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLD 382
Query: 187 ACTRAGDMEKAFALFQEMPMK----NTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLP 242
A + G M+ AF + +MP+K N +S++T++ G + G+F EA++LF EM+
Sbjct: 383 AICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIAL 442
Query: 243 DYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIF 302
D ++ ++LS +G E + I G+ AL+ Y K G ++ ++F
Sbjct: 443 DRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVF 502
Query: 303 FKAQ----VKDIYCWNAIISGLALHGHGYAALKLFGYMK 337
+ + + ++ ++ +I G + G A+++F K
Sbjct: 503 TEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFK 541
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 155/322 (48%), Gaps = 21/322 (6%)
Query: 21 IIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFA-FHGQTIKT 79
+I + G E+A+ + +M+ +G R + T+ ++ A GK A F + +
Sbjct: 274 LISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRN 333
Query: 80 GFYRHIFVQTALINMYGTLHCTADACKMFENMPVK----DLVAWNSMLDAYASNGEMEDA 135
G +L+ + A +F+ M + D+ ++N++LDA G+M+ A
Sbjct: 334 GVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLA 393
Query: 136 ISLFHMMPLK----DLSSFNILISGYSSCGEVLAARSIFDKMA----IKDIVSWNSILSA 187
+ MP+K ++ S++ +I G++ G A ++F +M D VS+N++LS
Sbjct: 394 FEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSI 453
Query: 188 CTRAGDMEKAFALFQEMP----MKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPD 243
T+ G E+A + +EM K+ +++N +L G ++G++ E +F EMK + LP+
Sbjct: 454 YTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPN 513
Query: 244 YLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFF 303
LT ++++ + G + ++I +GL + + +AL+D K G + A+ +
Sbjct: 514 LLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLID 573
Query: 304 KAQVK----DIYCWNAIISGLA 321
+ + ++ +N+II
Sbjct: 574 EMTKEGISPNVVTYNSIIDAFG 595
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 127/271 (46%), Gaps = 21/271 (7%)
Query: 89 TALINMYGTLHCTADACKMFENMPV----KDLVAWNSMLDAYASNGEMEDAISLFHMMP- 143
+A+I+ G A ++FE + A+++++ AY +G E+AIS+F+ M
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 144 ---LKDLSSFNILISGYSSCG-EVLAARSIFDKMAIK----DIVSWNSILSACTRAGDME 195
+L ++N +I G E FD+M D +++NS+L+ C+R G E
Sbjct: 297 YGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWE 356
Query: 196 KAFALFQEMPMK----NTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVL 251
A LF EM + + S+NT+L + GQ A ++ +M +P+ ++ ++V+
Sbjct: 357 AARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVI 416
Query: 252 SACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFK-AQV--- 307
A G + + + Y G+A L+ +Y K G E+AL I + A V
Sbjct: 417 DGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIK 476
Query: 308 KDIYCWNAIISGLALHGHGYAALKLFGYMKK 338
KD+ +NA++ G G K+F MK+
Sbjct: 477 KDVVTYNALLGGYGKQGKYDEVKKVFTEMKR 507
>AT3G05340.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:1524071-1526047 REVERSE
Length = 658
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 128/279 (45%), Gaps = 14/279 (5%)
Query: 69 GFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYAS 128
G H K G + +++AL++MY DA +FE+ D V+ +L A
Sbjct: 275 GQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQ 334
Query: 129 NGEMEDAISLFHMMPLKDLSSFNILIS---GYSSCGEVLAARSIFDKMAIKDIVSWNS-- 183
NG E+AI F M + ++S G S L + IK S N+
Sbjct: 335 NGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFV 394
Query: 184 ---ILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNC 240
+++ ++ GD+ + +F+ MP +N +SWN+M+A + G A+ L++EM T
Sbjct: 395 NNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEV 454
Query: 241 LPDYLTATSVLSACAHLGSLETGIK-IHVYAIYSGLASSPHVTTALMDMYAKCGSIEQAL 299
P +T S+L AC+H+G ++ G + ++ G+ T ++DM + G +++A
Sbjct: 455 KPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAK 514
Query: 300 QIFFKAQVK-DIYCWNAIISGLALHGHG----YAALKLF 333
+K D W A++ + HG YAA +LF
Sbjct: 515 SFIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQLF 553
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 129/296 (43%), Gaps = 8/296 (2%)
Query: 49 DNYTFPILLKAAGKNCASRIGFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMF 108
D+ T I+L + H I +G+ + I V LI Y C+ +F
Sbjct: 154 DHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVF 213
Query: 109 ENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMP--LKDLSSFNIL-----ISGYSSCG 161
+ M ++++ +++ N ED + LF +M L +S L SG
Sbjct: 214 DGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIV 273
Query: 162 EVLAARSIFDKMAIK-DIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCL 220
E ++ K I+ ++ ++++ ++ G +E A+ +F+ + +S +L G
Sbjct: 274 EGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLA 333
Query: 221 QRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPH 280
Q G EA+ F M D ++VL SL G ++H I + +
Sbjct: 334 QNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTF 393
Query: 281 VTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYM 336
V L++MY+KCG + + +F + ++ WN++I+ A HGHG AALKL+ M
Sbjct: 394 VNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEM 449
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 139/316 (43%), Gaps = 20/316 (6%)
Query: 40 NMQVHGFRADNYTFPILLKAAGKNC-ASRIGFAFHGQTIKT---------GFYRH-IFVQ 88
N QV F ++ +LL G+ +G H IK +R+ + V
Sbjct: 34 NYQVSTFLLNHVDMSLLLSICGREGWFPHLGPCLHASIIKNPEFFEPVDADIHRNALVVW 93
Query: 89 TALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMPLK--- 145
+L+++Y DA K+F+ MP++D+++ N + + N E E L M
Sbjct: 94 NSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGSGGF 153
Query: 146 DLSSFNILISGYSSCGEVLAARSIFDKMAI-----KDIVSWNSILSACTRAGDMEKAFAL 200
D ++ I++S E + +AI K+I N ++++ + G +
Sbjct: 154 DHATLTIVLS-VCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGV 212
Query: 201 FQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSL 260
F M +N I+ +++G ++ + + LF M+ P+ +T S L+AC+ +
Sbjct: 213 FDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRI 272
Query: 261 ETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGL 320
G +IH G+ S + +ALMDMY+KCGSIE A IF D I+ GL
Sbjct: 273 VEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGL 332
Query: 321 ALHGHGYAALKLFGYM 336
A +G A++ F M
Sbjct: 333 AQNGSEEEAIQFFIRM 348
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 104/261 (39%), Gaps = 39/261 (14%)
Query: 29 GNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTIKTGFYRHIFVQ 88
G+ E+A+ ++ M G D +L + + + +G H IK F + FV
Sbjct: 336 GSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVN 395
Query: 89 TALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMPLKDLS 148
LINMY D+ +F MP ++ V+WNSM+ A+A +G A+ L+ M ++
Sbjct: 396 NGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVK 455
Query: 149 SFNILISGYSSCGEVLAARSIFDKMAIKDIVSWNSILSACTRAGDMEKAFALFQEMPMKN 208
+ V++ S+L AC+ G ++K L EM +
Sbjct: 456 PTD---------------------------VTFLSLLHACSHVGLIDKGRELLNEMKEVH 488
Query: 209 TISWNTMLAGCL-----QRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETG 263
I T C+ + G EA D + PD ++L AC+ G E G
Sbjct: 489 GIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLK---PDCKIWQALLGACSFHGDTEVG 545
Query: 264 IKIHVYAIYSGLASSPHVTTA 284
YA ++P ++A
Sbjct: 546 ----EYAAEQLFQTAPDSSSA 562
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 73/164 (44%), Gaps = 7/164 (4%)
Query: 178 IVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKT 237
+V WNS+LS + G + A LF EMPM++ IS N + G L+ + L M
Sbjct: 90 LVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLG 149
Query: 238 TNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQ 297
+ D+ T T VLS C IH AI SG V L+ Y KCG
Sbjct: 150 SGGF-DHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVS 208
Query: 298 ALQIFFKAQVKDIYCWNAIISGL---ALHGHGYAALKLFGYMKK 338
+F +++ A+ISGL LH G L+LF M++
Sbjct: 209 GRGVFDGMSHRNVITLTAVISGLIENELHEDG---LRLFSLMRR 249
>AT3G28660.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:10739400-10740914 REVERSE
Length = 504
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 78/134 (58%), Gaps = 1/134 (0%)
Query: 197 AFALFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAH 256
A +F E+P + + W+ ++ G ++ G SE +++F EM PD + T+ L+ACA
Sbjct: 171 ARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQ 230
Query: 257 LGSLETGIKIHVYAIYSG-LASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNA 315
+G+L G IH + + S V TAL+DMYAKCG IE A+++F K ++++ W A
Sbjct: 231 VGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAA 290
Query: 316 IISGLALHGHGYAA 329
+I G A +G+ A
Sbjct: 291 LIGGYAAYGYAKKA 304
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 132/286 (46%), Gaps = 15/286 (5%)
Query: 52 TFPILLKAAGKNCASRIGFAFHGQTIKTG-FYRHIFVQTALINMYGTLHCTADACKMFEN 110
TF L+ A K C +G H +K G F VQT ++ +Y DA K+F+
Sbjct: 118 TFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDE 177
Query: 111 MPVKDLVAWNSMLDAYASNGEMEDAISLFHMMPLK----DLSSFNILISGYSSCGEVLAA 166
+P D+V W+ +++ Y G + + +F M ++ D S ++ + G +
Sbjct: 178 IPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQG 237
Query: 167 RSIFDKMAIK-----DIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQ 221
+ I + + K D+ +++ + G +E A +F+++ +N SW ++ G
Sbjct: 238 KWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAA 297
Query: 222 RGQFSEAVDLFDEMKTTNCL-PDYLTATSVLSACAHLGSLETGIKI--HVYAIYSGLASS 278
G +A D ++ + + PD + VL+ACAH G LE G + ++ A Y G+
Sbjct: 298 YGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARY-GITPK 356
Query: 279 PHVTTALMDMYAKCGSIEQALQIFFKAQVKDI-YCWNAIISGLALH 323
+ ++D+ + G ++ AL + K +K + W A+++G H
Sbjct: 357 HEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCRTH 402
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 104/222 (46%), Gaps = 12/222 (5%)
Query: 10 MPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIG 69
+P +V +W+ ++ ++ G + + + M V G D ++ L A + A G
Sbjct: 178 IPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQG 237
Query: 70 FAFHGQTIKTGFYR-HIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYAS 128
H K + +FV TAL++MY C A ++FE + +++ +W +++ YA+
Sbjct: 238 KWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAA 297
Query: 129 NGEMEDAISLFHMMPLKDLSSFN--ILISGYSSC---GEVLAARSIFDKMAIKDIVS--- 180
G + A + + +D + +L+ ++C G + R++ + M + ++
Sbjct: 298 YGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKH 357
Query: 181 --WNSILSACTRAGDMEKAFALFQEMPMKNTIS-WNTMLAGC 219
++ I+ RAG ++ A L ++MPMK S W +L GC
Sbjct: 358 EHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGC 399
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 88/201 (43%), Gaps = 12/201 (5%)
Query: 148 SSFNILISGYSSCGEVLAARSIFDKMAI----KDIVSWNSILSACTRAGDMEKAF----A 199
S+ LI C V +S I ++ + + +L+A ++ K F +
Sbjct: 9 QSWKSLILASQRCNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASS 68
Query: 200 LFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEM---KTTNCLPDYLTATSVLSACAH 256
+F + + N+ ++TM+ C + Q + F M + + P YLT ++ AC
Sbjct: 69 IFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLK 128
Query: 257 LGSLETGIKIHVYAIYSGL-ASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNA 315
G +IH + + +G+ S HV T ++ +Y + + A ++F + D+ W+
Sbjct: 129 ACFFSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDV 188
Query: 316 IISGLALHGHGYAALKLFGYM 336
+++G G G L++F M
Sbjct: 189 LMNGYVRCGLGSEGLEVFKEM 209
>AT1G64580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23985078-23988740 REVERSE
Length = 1052
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 153/320 (47%), Gaps = 24/320 (7%)
Query: 41 MQVHGFRADNYTFPILLKAAGKNCASRIGFAFH--GQTIKTGFYRHIFVQTALINMYGTL 98
M+++G D Y+F IL+ + SR+ FA G+ +K G+ I +L++ + +
Sbjct: 97 MELYGISHDLYSFTILIHCFCR--CSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLV 154
Query: 99 HCTADACK----MFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMPLK----DLSSF 150
+ DA M ++ ++V +N+++D NGE+ A+ L + M K D+ ++
Sbjct: 155 NRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTY 214
Query: 151 NILISGYSSCGE-VLAARSIFDKMAIK---DIVSWNSILSACTRAGDMEKAFALFQEMPM 206
N L++G G AAR + D M D+V++ +++ + G++++A L++EM
Sbjct: 215 NTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQ 274
Query: 207 K----NTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLET 262
N +++N+++ G G+ +A FD M + C P+ +T +++S ++
Sbjct: 275 SSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDE 334
Query: 263 GIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIF----FKAQVKDIYCWNAIIS 318
G+K+ G + L+ Y + G + AL IF + DI ++
Sbjct: 335 GMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLH 394
Query: 319 GLALHGHGYAALKLFGYMKK 338
GL ++G +AL F M++
Sbjct: 395 GLCVNGEIESALVKFDDMRE 414
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/325 (23%), Positives = 152/325 (46%), Gaps = 20/325 (6%)
Query: 34 AVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTIKTGFYRHIFVQTALIN 93
+ Y M+ G D Y+F IL+ + + A G+ +K GF I +L+N
Sbjct: 627 VIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLN 686
Query: 94 MYGTLHCTADACKMFENMP----VKDLVAWNSMLDAYASNGEMEDAISLFHMMPLK---- 145
+ + +A + ++M V ++V +N++++ N ++ +A+ +F+ M K
Sbjct: 687 GFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRA 746
Query: 146 DLSSFNILISGYSSCGE-VLAARSIFDKMAIK---DIVSWNSILSACTRAGDMEKAFALF 201
D ++N LISG S+ G AAR + D + K +++ + +++ + G++ +A L+
Sbjct: 747 DAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLY 806
Query: 202 QEMPMK----NTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHL 257
+EM + N ++N+++ G G +A +FD M + C PD +T ++++
Sbjct: 807 KEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKS 866
Query: 258 GSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFK----AQVKDIYCW 313
+E G+K+ Y GL L+ Y + G + A ++F + DI +
Sbjct: 867 KRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTY 926
Query: 314 NAIISGLALHGHGYAALKLFGYMKK 338
N ++ L +G AL + ++K
Sbjct: 927 NILLDCLCNNGKIEKALVMVEDLQK 951
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 137/304 (45%), Gaps = 35/304 (11%)
Query: 43 VHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTA 102
V GF +Y LL G N + + +F G + + H + + + LHC
Sbjct: 542 VKGFVRRHY----LLLERGNNPETSLSRSFSGAS-----HHHHYRE----RLRNELHCIK 588
Query: 103 --DA----CKMFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMP----LKDLSSFNI 152
DA C+M ++ P+ +V + +L A + + I L+H M DL SF I
Sbjct: 589 FDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTI 648
Query: 153 LISGYSSCGEVLAARSIFDKMA----IKDIVSWNSILSACTRAGDMEKAFALFQEMP--- 205
LI + C + A ++ KM IV+ S+L+ + ++A +L M
Sbjct: 649 LIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFG 708
Query: 206 -MKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGI 264
+ N + +NT++ G + + A+++F M+ D +T +++S ++ G
Sbjct: 709 FVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAA 768
Query: 265 KIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIF----FKAQVKDIYCWNAIISGL 320
++ + + + TAL+D + K G++ +A ++ ++ V +++ +N++I+G
Sbjct: 769 RLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGF 828
Query: 321 ALHG 324
+HG
Sbjct: 829 CIHG 832
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 94/222 (42%), Gaps = 51/222 (22%)
Query: 72 FHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVK----DLVAWNSMLDAYA 127
+ + I+ ++F +LIN + C DA MF+ M K D+V +N+++ +
Sbjct: 805 LYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFC 864
Query: 128 SNGEMEDAISLFHMMPLK----DLSSFNILISGYSSCGEVLAARSIFDKMAI-------- 175
+ +ED + LF M + D ++N LI GY G++ A+ +F++M
Sbjct: 865 KSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIV 924
Query: 176 -------------------------------KDIVSWNSILSACTRAGDMEKAFALFQEM 204
DI+++N I+ R +++A+ LF+ +
Sbjct: 925 TYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSL 984
Query: 205 PMK----NTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLP 242
K + I++ TM++G ++G EA L MK +P
Sbjct: 985 TRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMP 1026
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 108/263 (41%), Gaps = 23/263 (8%)
Query: 14 EVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFH 73
+V +N ++ G A +M D TF L+ K +
Sbjct: 210 DVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELY 269
Query: 74 GQTIKTGFYRHIFVQTALIN---MYGTLHCTADACKMFENMPVK----DLVAWNSMLDAY 126
+ I++ + ++IN M+G L+ DA K F+ M K ++V +N+++ +
Sbjct: 270 KEMIQSSVDPNNVTYNSIINGLCMHGRLY---DAKKTFDLMASKGCFPNVVTYNTLISGF 326
Query: 127 ASNGEMEDAISLFHMMPLK----DLSSFNILISGYSSCGEVLAARSIF----DKMAIKDI 178
+++ + LF M + D+ ++N LI GY G++ A IF + DI
Sbjct: 327 CKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDI 386
Query: 179 VSWNSILSACTRAGDMEKAFALFQEMPMKNT----ISWNTMLAGCLQRGQFSEAVDLFDE 234
++ +L G++E A F +M +++N M+ G + + +A +LF
Sbjct: 387 ITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCR 446
Query: 235 MKTTNCLPDYLTAT-SVLSACAH 256
+ PD T T +L C +
Sbjct: 447 LPVEGVKPDARTYTIMILGLCKN 469
>AT1G12700.1 | Symbols: | helicase domain-containing protein /
pentatricopeptide (PPR) repeat-containing protein |
chr1:4322913-4326197 REVERSE
Length = 828
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 69/314 (21%), Positives = 146/314 (46%), Gaps = 20/314 (6%)
Query: 45 GFRADNYTFPILLKAAGKNCASRIGFAFHGQTIKTGFYRHIFVQTALIN---MYGTLHCT 101
G+ D TF L+K + ++ G + +++N G
Sbjct: 143 GYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLA 202
Query: 102 ADACKMFENMPVK-DLVAWNSMLDAYASNGEMEDAISLFHMMPLKDLSS----FNILISG 156
D + E VK D+ +++++D+ +G ++ AISLF M K + S +N L+ G
Sbjct: 203 LDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRG 262
Query: 157 YSSCGE----VLAARSIFDKMAIKDIVSWNSILSACTRAGDMEKAFALFQEMPMK----N 208
G+ L + + + + +++++N +L + G +++A L++EM + N
Sbjct: 263 LCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPN 322
Query: 209 TISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHV 268
I++NT++ G + + SEA ++ D M C PD +T TS++ + ++ G+K+
Sbjct: 323 IITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFR 382
Query: 269 YAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFK----AQVKDIYCWNAIISGLALHG 324
GL ++ + L+ + + G I+ A ++F + + D+ + ++ GL +G
Sbjct: 383 NISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNG 442
Query: 325 HGYAALKLFGYMKK 338
AL++F ++K
Sbjct: 443 KLEKALEIFEDLQK 456
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/259 (19%), Positives = 111/259 (42%), Gaps = 16/259 (6%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTI 77
+N +++ G L +M + TF +LL K + + + I
Sbjct: 256 YNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMI 315
Query: 78 KTGFYRHIFVQTALINMYGTLHCTADACKMFE----NMPVKDLVAWNSMLDAYASNGEME 133
G +I L++ Y + ++A M + N D+V + S++ Y ++
Sbjct: 316 TRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVD 375
Query: 134 DAISLFHMMPLKDLS----SFNILISGYSSCGEVLAARSIFDKMA----IKDIVSWNSIL 185
D + +F + + L +++IL+ G+ G++ A +F +M + D++++ +L
Sbjct: 376 DGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILL 435
Query: 186 SACTRAGDMEKAFALFQEMPMKN----TISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCL 241
G +EKA +F+++ + + T++ G + G+ +A +LF +
Sbjct: 436 DGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVK 495
Query: 242 PDYLTATSVLSACAHLGSL 260
P+ +T T ++S GSL
Sbjct: 496 PNVMTYTVMISGLCKKGSL 514
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/216 (19%), Positives = 98/216 (45%), Gaps = 14/216 (6%)
Query: 1 MPLLVCNCFMPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAA 60
+ L+V N P ++ + +IK + +V + + + N+ G A+ T+ IL++
Sbjct: 346 LDLMVRNKCSP--DIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGF 403
Query: 61 GKNCASRIGFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDL---- 116
++ ++ + + G + L++ A ++FE++ +
Sbjct: 404 CQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGI 463
Query: 117 VAWNSMLDAYASNGEMEDAISLFHMMPLK----DLSSFNILISGYSSCGEVLAARSIFDK 172
V + ++++ G++EDA +LF +P K ++ ++ ++ISG G + A + K
Sbjct: 464 VMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRK 523
Query: 173 MA----IKDIVSWNSILSACTRAGDMEKAFALFQEM 204
M + ++N+++ A R GD+ + L +EM
Sbjct: 524 MEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEM 559
>AT5G39710.1 | Symbols: EMB2745 | EMB2745 (EMBRYO DEFECTIVE 2745) |
chr5:15895729-15897972 FORWARD
Length = 747
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/322 (21%), Positives = 146/322 (45%), Gaps = 20/322 (6%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTI 77
+N +I G ++ M G+ D T+ L+K K H + +
Sbjct: 278 YNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEML 337
Query: 78 KTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLV----AWNSMLDAYASNGEME 133
+ G + T+LI+ A + + M V+ L + +++D ++ G M
Sbjct: 338 RHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMN 397
Query: 134 DAISLFHMMPLKDLS----SFNILISGYSSCGEVLAARSIFDKMAIK----DIVSWNSIL 185
+A + M S ++N LI+G+ G++ A ++ + M K D+VS++++L
Sbjct: 398 EAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVL 457
Query: 186 SACTRAGDMEKAFALFQEMPMK----NTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCL 241
S R+ D+++A + +EM K +TI++++++ G ++ + EA DL++EM
Sbjct: 458 SGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLP 517
Query: 242 PDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQA--- 298
PD T T++++A G LE +++H + G+ + L++ K +A
Sbjct: 518 PDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRL 577
Query: 299 -LQIFFKAQVKDIYCWNAIISG 319
L++F++ V ++ +I
Sbjct: 578 LLKLFYEESVPSDVTYHTLIEN 599
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/249 (20%), Positives = 119/249 (47%), Gaps = 16/249 (6%)
Query: 106 KMFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMPLK----DLSSFNILISGYSSCG 161
+M E+ ++ +N ++ + G ++ A++LF M K ++ ++N LI GY
Sbjct: 195 EMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLR 254
Query: 162 EVLAARSIFDKMAIK----DIVSWNSILSACTRAGDMEKAFALFQEMPMK----NTISWN 213
++ + MA+K +++S+N +++ R G M++ + EM + + +++N
Sbjct: 255 KIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYN 314
Query: 214 TMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYS 273
T++ G + G F +A+ + EM P +T TS++ + G++ ++
Sbjct: 315 TLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVR 374
Query: 274 GLASSPHVTTALMDMYAKCGSIEQALQIFFKAQ----VKDIYCWNAIISGLALHGHGYAA 329
GL + T L+D +++ G + +A ++ + + +NA+I+G + G A
Sbjct: 375 GLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDA 434
Query: 330 LKLFGYMKK 338
+ + MK+
Sbjct: 435 IAVLEDMKE 443
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 91/202 (45%), Gaps = 13/202 (6%)
Query: 148 SSFNILISGYSSCGEVLAARSIFDKMA----IKDIVSWNSILSACTRAG-DMEKAFALFQ 202
S F++++ YS + A SI + ++S+N++L A R+ ++ A +F+
Sbjct: 135 SVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFK 194
Query: 203 EM----PMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLG 258
EM N ++N ++ G G A+ LFD+M+T CLP+ +T +++ L
Sbjct: 195 EMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLR 254
Query: 259 SLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVK----DIYCWN 314
++ G K+ GL + +++ + G +++ + + + D +N
Sbjct: 255 KIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYN 314
Query: 315 AIISGLALHGHGYAALKLFGYM 336
+I G G+ + AL + M
Sbjct: 315 TLIKGYCKEGNFHQALVMHAEM 336
>AT1G62680.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:
shoot apex, leaf whorl, flower, seed; EXPRESSED DURING:
F mature embryo stage, petal differentiation and
expansion stage; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT1G63130.1); Has
26421 Blast hits to 6237 proteins in 192 species: Archae
- 5; Bacteria - 22; Metazoa - 845; Fungi - 755; Plants -
23373; Viruses - 0; Other Eukaryotes - 1421 (source:
NCBI BLink). | chr1:23208247-23209893 REVERSE
Length = 548
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 153/320 (47%), Gaps = 24/320 (7%)
Query: 41 MQVHGFRADNYTFPILLKAAGKNCASRIGFAFH--GQTIKTGFYRHIFVQTALINMYGTL 98
M+V G R D YTF I++ C ++ A G+ +K G+ +L+N +
Sbjct: 111 MEVLGIRNDLYTFNIVINCFC--CCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRR 168
Query: 99 HCTADACKMFENMP----VKDLVAWNSMLDAYASNGEMEDAISLFHMMPLK----DLSSF 150
+ +DA + + M D+VA+N+++D+ + DA F + K ++ ++
Sbjct: 169 NRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTY 228
Query: 151 NILISGYSSCGE-VLAARSIFDKMAIK---DIVSWNSILSACTRAGDMEKAFALFQEMPM 206
L++G + AAR + D + K ++++++++L A + G + +A LF+EM
Sbjct: 229 TALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVR 288
Query: 207 ----KNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLET 262
+ +++++++ G + EA +FD M + CL D ++ ++++ +E
Sbjct: 289 MSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVED 348
Query: 263 GIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIF----FKAQVKDIYCWNAIIS 318
G+K+ GL S+ L+ + + G +++A + F F DI+ +N ++
Sbjct: 349 GMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLG 408
Query: 319 GLALHGHGYAALKLFGYMKK 338
GL +G AL +F M+K
Sbjct: 409 GLCDNGELEKALVIFEDMQK 428
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 85/176 (48%), Gaps = 16/176 (9%)
Query: 77 IKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVA----WNSMLDAYASNGEM 132
+ G + LIN + D K+F M + LV+ +N+++ + G++
Sbjct: 322 VSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDV 381
Query: 133 EDAISLFHMMPL----KDLSSFNILISGYSSCGEVLAARSIFDKMAIK----DIVSWNSI 184
+ A F M D+ ++NIL+ G GE+ A IF+ M + DIV++ ++
Sbjct: 382 DKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTV 441
Query: 185 LSACTRAGDMEKAFALFQEMPMK----NTISWNTMLAGCLQRGQFSEAVDLFDEMK 236
+ + G +E+A++LF + +K + +++ TM++G +G E L+ +MK
Sbjct: 442 IRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMK 497
>AT5G41170.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:16478860-16480443 REVERSE
Length = 527
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 141/318 (44%), Gaps = 20/318 (6%)
Query: 41 MQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTIKTGFYRHIFVQTALINMYGTLHC 100
+Q+ G D YT +L+ ++ + +F G+ +K GF I T+LIN + +
Sbjct: 98 LQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNR 157
Query: 101 TADACKMFENMP----VKDLVAWNSMLDAYASNGEMEDAISLFHMMP----LKDLSSFNI 152
+A M M D+V + +++D+ NG + A+SLF M D+ +
Sbjct: 158 MEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTS 217
Query: 153 LISGYSSCGEVLAARSIFDKMAIK----DIVSWNSILSACTRAGDMEKAFALFQEMPM-- 206
L++G + G A S+ M + D++++N+++ A + G A L+ EM
Sbjct: 218 LVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMS 277
Query: 207 --KNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGI 264
N ++ +++ G G EA +F M+T C PD + TS+++ ++ +
Sbjct: 278 IAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAM 337
Query: 265 KIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIF----FKAQVKDIYCWNAIISGL 320
KI GL + T L+ + + G A ++F + +I +N ++ L
Sbjct: 338 KIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCL 397
Query: 321 ALHGHGYAALKLFGYMKK 338
+G AL +F M+K
Sbjct: 398 CYNGKVKKALMIFEDMQK 415
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 87/178 (48%), Gaps = 19/178 (10%)
Query: 78 KTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVK----DLVAWNSMLDAYASNGEME 133
+ G + T LI +G + A ++F +M + ++ +N +L NG+++
Sbjct: 345 QKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVK 404
Query: 134 DAISLFHMMPLKDLS-------SFNILISGYSSCGEVLAARSIFDKMAIKDI----VSWN 182
A+ +F M +++ ++N+L+ G G++ A +F+ M +++ +++
Sbjct: 405 KALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYT 464
Query: 183 SILSACTRAGDMEKAFALFQEMPMK----NTISWNTMLAGCLQRGQFSEAVDLFDEMK 236
I+ +AG ++ A LF +P K N +++ TM++G + G EA LF +MK
Sbjct: 465 IIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMK 522
>AT5G16640.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:5461031-5462545 FORWARD
Length = 504
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 146/319 (45%), Gaps = 20/319 (6%)
Query: 40 NMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTIKTGFYRHIFVQTALINMYGTLH 99
MQ+ G + T ILL + + +F G+ IK G I +L+N +
Sbjct: 106 QMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGD 165
Query: 100 CTADACKMFENMP----VKDLVAWNSMLDAYASNGEMEDAISLFHMMPLK----DLSSFN 151
DA MF+ M ++V +N+++D + ++++A+ L + M D+ ++N
Sbjct: 166 RVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYN 225
Query: 152 ILISGYSSCGEVLAARSIFDKMAIK----DIVSWNSILSACTRAGDMEKAFALFQEMPMK 207
LISG S G A + M + D+ ++N+++ AC + G + +A ++EM +
Sbjct: 226 SLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRR 285
Query: 208 ----NTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETG 263
+ ++++ ++ G + EA ++F M + C PD +T + +++ +E G
Sbjct: 286 SLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHG 345
Query: 264 IKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIF----FKAQVKDIYCWNAIISG 319
+K+ G+ + T L+ Y + G + A +IF F +I +N ++ G
Sbjct: 346 MKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHG 405
Query: 320 LALHGHGYAALKLFGYMKK 338
L +G AL + M+K
Sbjct: 406 LCDNGKIEKALVILADMQK 424
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 122/278 (43%), Gaps = 27/278 (9%)
Query: 14 EVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFH 73
+V +N +I G A M D +TF L+ A K F+
Sbjct: 220 DVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFY 279
Query: 74 GQTIKTGFYRHIFVQTALIN---MYGTLHCTADACKMFENMPVK----DLVAWNSMLDAY 126
+ I+ I + LI MY L +A +MF M K D+V ++ +++ Y
Sbjct: 280 EEMIRRSLDPDIVTYSLLIYGLCMYSRLD---EAEEMFGFMVSKGCFPDVVTYSILINGY 336
Query: 127 ASNGEMEDAISLFHMMP----LKDLSSFNILISGYSSCGEVLAARSIFDKMAI----KDI 178
+ ++E + LF M +++ ++ ILI GY G++ A IF +M +I
Sbjct: 337 CKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNI 396
Query: 179 VSWNSILSACTRAGDMEKAFALFQEMPMK----NTISWNTMLAGCLQRGQFSEAVDLFDE 234
+++N +L G +EKA + +M + +++N ++ G + G+ ++A D++
Sbjct: 397 ITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCS 456
Query: 235 MKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIY 272
+ +PD T T+++ LG + G++ A++
Sbjct: 457 LNCQGLMPDIWTYTTMM-----LGLYKKGLRREADALF 489
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 107/248 (43%), Gaps = 20/248 (8%)
Query: 14 EVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFA-- 71
+V +N +I + G +A Y M D T+ +L+ G SR+ A
Sbjct: 255 DVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLI--YGLCMYSRLDEAEE 312
Query: 72 FHGQTIKTGFYRHIFVQTALINMY----GTLHCTADACKMFENMPVKDLVAWNSMLDAYA 127
G + G + + + LIN Y H C+M + V++ V + ++ Y
Sbjct: 313 MFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYC 372
Query: 128 SNGEMEDAISLFHMMPL----KDLSSFNILISGYSSCGEVLAARSIFDKMAIK----DIV 179
G++ A +F M ++ ++N+L+ G G++ A I M DIV
Sbjct: 373 RAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIV 432
Query: 180 SWNSILSACTRAGDMEKAFALFQEMP----MKNTISWNTMLAGCLQRGQFSEAVDLFDEM 235
++N I+ +AG++ A+ ++ + M + ++ TM+ G ++G EA LF +M
Sbjct: 433 TYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKM 492
Query: 236 KTTNCLPD 243
K LP+
Sbjct: 493 KEDGILPN 500
>AT1G22960.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:8128086-8130242 REVERSE
Length = 718
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/351 (23%), Positives = 149/351 (42%), Gaps = 21/351 (5%)
Query: 4 LVCNCFMPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKN 63
++ + MP+ V +N ++ G+ E+ ++ M+ T+ IL+ KN
Sbjct: 229 MIEHGIMPT--VITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKN 286
Query: 64 CASRIGFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSML 123
FHG ++GF + LI Y DA + + M + S
Sbjct: 287 GKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTY 346
Query: 124 DAYA----SNGEMEDAISLFHMMPLKDLSSFNILISGYSSCGEVLAARSIFDKMAIKD-- 177
+ Y G ++DA L M D+ S+N L+ GY G+ + A +FD + D
Sbjct: 347 NIYICALCDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIH 406
Query: 178 --IVSWNSILSACTRAGDMEKAFALFQEMPMK----NTISWNTMLAGCLQRGQFSEAVDL 231
IV++N+++ +G++E A L +EM + + I++ T++ G ++ G S A ++
Sbjct: 407 PSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEV 466
Query: 232 FDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVT--TALMDMY 289
+DEM PD T+ LG + ++H + + +P +T +D
Sbjct: 467 YDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATD-HHAPDLTIYNVRIDGL 525
Query: 290 AKCGSIEQALQ----IFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYM 336
K G++ +A++ IF V D + +I G +G A L+ M
Sbjct: 526 CKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEM 576
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 78/381 (20%), Positives = 145/381 (38%), Gaps = 95/381 (24%)
Query: 29 GNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTIKTGFYRHIFVQ 88
G E+A + +M+ GF Y+F L++ K + + + G I+
Sbjct: 287 GKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAG----IYPT 342
Query: 89 TALINMYGTLHCT----ADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMPL 144
T+ N+Y C DA ++ +M D+V++N+++ Y G+ +A LF +
Sbjct: 343 TSTYNIYICALCDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRA 402
Query: 145 KDLS----SFNILISGYSSCGEVLAARSIFDKMAIK----DIVSWNSI---------LSA 187
D+ ++N LI G G + A+ + ++M + D++++ ++ LS
Sbjct: 403 GDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSM 462
Query: 188 CT--------------------------RAGDMEKAFALFQEM-------P--------- 205
T R GD +KAF L +EM P
Sbjct: 463 ATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRI 522
Query: 206 ------------------------MKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCL 241
+ + +++ T++ G L+ GQF A +L+DEM
Sbjct: 523 DGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLY 582
Query: 242 PDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQI 301
P +T ++ A G LE + G+ + AL+ K G+I++A +
Sbjct: 583 PSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRY 642
Query: 302 FFKAQVKDI----YCWNAIIS 318
K + + I Y + +IS
Sbjct: 643 LCKMEEEGIPPNKYSYTMLIS 663
>AT1G05670.2 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transferase
family protein | chr1:1698574-1702715 REVERSE
Length = 1184
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 130/279 (46%), Gaps = 20/279 (7%)
Query: 78 KTGFYRHIFVQTALINMYGTLHCTADACKMFENMP----VKDLVAWNSMLDAYASNGEME 133
+ G + ++ ++I + + A+A + F M + D V + +++D + G++
Sbjct: 752 RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIR 811
Query: 134 DAISLFHMMPLKDLS----SFNILISGYSSCGEVLAARSIFDKMAIK----DIVSWNSIL 185
A F+ M +D++ ++ +ISG+ G+++ A +F +M K D V++ ++
Sbjct: 812 AASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELI 871
Query: 186 SACTRAGDMEKAFALFQEMPM----KNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCL 241
+ +AG M+ AF + M N +++ T++ G + G A +L EM
Sbjct: 872 NGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQ 931
Query: 242 PDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQI 301
P+ T S+++ G++E +K+ +GL + T LMD Y K G +++A +I
Sbjct: 932 PNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEI 991
Query: 302 FF----KAQVKDIYCWNAIISGLALHGHGYAALKLFGYM 336
K I +N +++G LHG KL +M
Sbjct: 992 LKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWM 1030
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 114/258 (44%), Gaps = 20/258 (7%)
Query: 101 TADACKMFENMPVK----DLVAWNSMLDAYASNGEMEDAISLFHMMPLK----DLSSFNI 152
TA A +F P ++ ++N ++ G +++A L +M LK D+ S++
Sbjct: 670 TATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYST 729
Query: 153 LISGYSSCGEVLAARSIFDKMAIKDIVS----WNSILSACTRAGDMEKAFALFQEMP--- 205
+++GY GE+ + + M K + + SI+ R + +A F EM
Sbjct: 730 VVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQG 789
Query: 206 -MKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGI 264
+ +T+ + T++ G +RG A F EM + + PD LT T+++S +G +
Sbjct: 790 ILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAG 849
Query: 265 KIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQI---FFKAQV-KDIYCWNAIISGL 320
K+ GL T L++ Y K G ++ A ++ +A ++ + +I GL
Sbjct: 850 KLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGL 909
Query: 321 ALHGHGYAALKLFGYMKK 338
G +A +L M K
Sbjct: 910 CKEGDLDSANELLHEMWK 927
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 115/277 (41%), Gaps = 51/277 (18%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTI 77
+ E+I + G+ + A + +M G + T+ L+ K +
Sbjct: 867 FTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMW 926
Query: 78 KTGFYRHIFVQTALINMYGTLHCTADACKM---FENMPVK-DLVAWNSMLDAYASNGEME 133
K G +IF +++N +A K+ FE + D V + +++DAY +GEM+
Sbjct: 927 KIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMD 986
Query: 134 DAISLFHMMPLKDLS----SFNILISGYSSCGEVLAARSIFDKMAIKDI----VSWNSIL 185
A + M K L +FN+L++G+ G + + + M K I ++NS++
Sbjct: 987 KAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLV 1046
Query: 186 SA-----------------CTR------------------AGDMEKAFALFQEMPMK--- 207
C+R A +M++A+ LFQEM K
Sbjct: 1047 KQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFS 1106
Query: 208 -NTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPD 243
+ +++ ++ G L+R +F EA ++FD+M+ D
Sbjct: 1107 VSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAAD 1143
>AT1G05670.1 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transferase
family protein | chr1:1698574-1702715 REVERSE
Length = 1184
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 130/279 (46%), Gaps = 20/279 (7%)
Query: 78 KTGFYRHIFVQTALINMYGTLHCTADACKMFENMP----VKDLVAWNSMLDAYASNGEME 133
+ G + ++ ++I + + A+A + F M + D V + +++D + G++
Sbjct: 752 RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIR 811
Query: 134 DAISLFHMMPLKDLS----SFNILISGYSSCGEVLAARSIFDKMAIK----DIVSWNSIL 185
A F+ M +D++ ++ +ISG+ G+++ A +F +M K D V++ ++
Sbjct: 812 AASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELI 871
Query: 186 SACTRAGDMEKAFALFQEMPM----KNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCL 241
+ +AG M+ AF + M N +++ T++ G + G A +L EM
Sbjct: 872 NGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQ 931
Query: 242 PDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQI 301
P+ T S+++ G++E +K+ +GL + T LMD Y K G +++A +I
Sbjct: 932 PNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEI 991
Query: 302 FF----KAQVKDIYCWNAIISGLALHGHGYAALKLFGYM 336
K I +N +++G LHG KL +M
Sbjct: 992 LKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWM 1030
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 114/258 (44%), Gaps = 20/258 (7%)
Query: 101 TADACKMFENMPVK----DLVAWNSMLDAYASNGEMEDAISLFHMMPLK----DLSSFNI 152
TA A +F P ++ ++N ++ G +++A L +M LK D+ S++
Sbjct: 670 TATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYST 729
Query: 153 LISGYSSCGEVLAARSIFDKMAIKDIVS----WNSILSACTRAGDMEKAFALFQEMP--- 205
+++GY GE+ + + M K + + SI+ R + +A F EM
Sbjct: 730 VVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQG 789
Query: 206 -MKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGI 264
+ +T+ + T++ G +RG A F EM + + PD LT T+++S +G +
Sbjct: 790 ILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAG 849
Query: 265 KIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQI---FFKAQV-KDIYCWNAIISGL 320
K+ GL T L++ Y K G ++ A ++ +A ++ + +I GL
Sbjct: 850 KLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGL 909
Query: 321 ALHGHGYAALKLFGYMKK 338
G +A +L M K
Sbjct: 910 CKEGDLDSANELLHEMWK 927
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 115/277 (41%), Gaps = 51/277 (18%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTI 77
+ E+I + G+ + A + +M G + T+ L+ K +
Sbjct: 867 FTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMW 926
Query: 78 KTGFYRHIFVQTALINMYGTLHCTADACKM---FENMPVK-DLVAWNSMLDAYASNGEME 133
K G +IF +++N +A K+ FE + D V + +++DAY +GEM+
Sbjct: 927 KIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMD 986
Query: 134 DAISLFHMMPLKDLS----SFNILISGYSSCGEVLAARSIFDKMAIKDI----VSWNSIL 185
A + M K L +FN+L++G+ G + + + M K I ++NS++
Sbjct: 987 KAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLV 1046
Query: 186 SA-----------------CTR------------------AGDMEKAFALFQEMPMK--- 207
C+R A +M++A+ LFQEM K
Sbjct: 1047 KQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFS 1106
Query: 208 -NTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPD 243
+ +++ ++ G L+R +F EA ++FD+M+ D
Sbjct: 1107 VSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAAD 1143
>AT1G12775.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED IN:
7 plant structures; EXPRESSED DURING: F mature embryo
stage, petal differentiation and expansion stage, D
bilateral stage, E expanded cotyledon stage; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT1G12300.1); Has 27792 Blast hits to 6269
proteins in 197 species: Archae - 2; Bacteria - 23;
Metazoa - 895; Fungi - 767; Plants - 24554; Viruses - 0;
Other Eukaryotes - 1551 (source: NCBI BLink). |
chr1:4353906-4355840 FORWARD
Length = 644
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/284 (21%), Positives = 140/284 (49%), Gaps = 20/284 (7%)
Query: 75 QTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVK----DLVAWNSMLDAYASNG 130
+ ++TGF + ++N+ TA A ++ M + D V ++ ++D +G
Sbjct: 218 RMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDG 277
Query: 131 EMEDAISLFHMMPLK----DLSSFNILISGYSSCGE----VLAARSIFDKMAIKDIVSWN 182
+++A +LF+ M +K D+ ++N LI G+ + G R + + ++V+++
Sbjct: 278 SLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFS 337
Query: 183 SILSACTRAGDMEKAFALFQEMPMK----NTISWNTMLAGCLQRGQFSEAVDLFDEMKTT 238
++ + + G + +A L +EM + NTI++N+++ G + + EA+ + D M +
Sbjct: 338 VLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISK 397
Query: 239 NCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQA 298
C PD +T +++ ++ G+++ G+ ++ L+ + + G +E A
Sbjct: 398 GCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVA 457
Query: 299 LQIF---FKAQVK-DIYCWNAIISGLALHGHGYAALKLFGYMKK 338
++F +V+ DI + ++ GL +G AL++FG ++K
Sbjct: 458 KKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEK 501
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 110/226 (48%), Gaps = 16/226 (7%)
Query: 29 GNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTIKTGFYRHIFVQ 88
G+ + A + M++ GF+AD T+ L+ G IK ++
Sbjct: 277 GSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTF 336
Query: 89 TALINMYGTLHCTADACKMFENMPVKDL----VAWNSMLDAYASNGEMEDAISLFHMMPL 144
+ LI+ + +A ++ + M + + + +NS++D + +E+AI + +M
Sbjct: 337 SVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMIS 396
Query: 145 K----DLSSFNILISGYSSCGEVLAARSIFDKMAIKDI----VSWNSILSACTRAGDMEK 196
K D+ +FNILI+GY + +F +M+++ + V++N+++ ++G +E
Sbjct: 397 KGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEV 456
Query: 197 AFALFQEMPMK----NTISWNTMLAGCLQRGQFSEAVDLFDEMKTT 238
A LFQEM + + +S+ +L G G+ +A+++F +++ +
Sbjct: 457 AKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKS 502
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 111/256 (43%), Gaps = 20/256 (7%)
Query: 103 DACKMFENM----PVKDLVAWNSMLDAYASNGEMEDAISLFHMMPLKDLS----SFNILI 154
DA +F +M P+ ++ +N + A A + E ++L M K ++ + +I+I
Sbjct: 71 DAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMI 130
Query: 155 SGYSSCGEVLAARSIFDKMAI----KDIVSWNSILSACTRAGDMEKAFALFQ---EMPMK 207
+ + C ++ A S K+ D V +N++L+ + +A L EM K
Sbjct: 131 NCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHK 190
Query: 208 NT-ISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKI 266
T I+ NT++ G G+ S+AV L D M T P+ +T VL+ G +++
Sbjct: 191 PTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMEL 250
Query: 267 HVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVK----DIYCWNAIISGLAL 322
+ + ++D K GS++ A +F + ++K DI +N +I G
Sbjct: 251 LRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCN 310
Query: 323 HGHGYAALKLFGYMKK 338
G KL M K
Sbjct: 311 AGRWDDGAKLLRDMIK 326
>AT1G62670.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23204773-23206665 REVERSE
Length = 630
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 123/257 (47%), Gaps = 20/257 (7%)
Query: 102 ADACKMFENMPVK----DLVAWNSMLDAYASNGEMEDAISLFHMMPLKDLS----SFNIL 153
+DA ++ +M + D+ +++++DA+ G++ +A L+ M + + +++ L
Sbjct: 308 SDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSL 367
Query: 154 ISGYSSCGEVLAARSIFDKMAIK----DIVSWNSILSACTRAGDMEKAFALFQEMPMK-- 207
I+G+ + A+ +F+ M K D+V++N+++ + +E+ +F+EM +
Sbjct: 368 INGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGL 427
Query: 208 --NTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIK 265
NT+++N ++ G Q G A ++F EM + P+ +T ++L G LE +
Sbjct: 428 VGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMV 487
Query: 266 IHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIF----FKAQVKDIYCWNAIISGLA 321
+ Y S + + + +++ K G +E +F K D+ +N +ISG
Sbjct: 488 VFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFC 547
Query: 322 LHGHGYAALKLFGYMKK 338
G A LF MK+
Sbjct: 548 RKGSKEEADALFKEMKE 564
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/344 (20%), Positives = 154/344 (44%), Gaps = 28/344 (8%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAA---GK-NCASRIGFAFH 73
+N II + + A+ + M+ G R + T+ L+ G+ + ASR+
Sbjct: 259 YNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRL----L 314
Query: 74 GQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDL----VAWNSMLDAYASN 129
I+ +F +ALI+ + +A K+++ M + + V ++S+++ + +
Sbjct: 315 SDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMH 374
Query: 130 GEMEDAISLFHMMPLK----DLSSFNILISGYSSCGEVLAARSIFDKMA----IKDIVSW 181
+++A +F M K D+ ++N LI G+ V +F +M+ + + V++
Sbjct: 375 DRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTY 434
Query: 182 NSILSACTRAGDMEKAFALFQEMPMK----NTISWNTMLAGCLQRGQFSEAVDLFDEMKT 237
N ++ +AGD + A +F+EM N +++NT+L G + G+ +A+ +F+ ++
Sbjct: 435 NILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQR 494
Query: 238 TNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQ 297
+ P T ++ G +E G + G+ ++ + + GS E+
Sbjct: 495 SKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEE 554
Query: 298 ALQIFFKAQ----VKDIYCWNAIISGLALHGHGYAALKLFGYMK 337
A +F + + + + C+N +I G A+ +L M+
Sbjct: 555 ADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMR 598
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 74/135 (54%), Gaps = 12/135 (8%)
Query: 115 DLVAWNSMLDAYASNGEMEDAISLFHMMPLKDLS----SFNILISGYSSCGEVLAARSIF 170
+++ +N++LD NG++E A+ +F + + ++NI+I G G+V +F
Sbjct: 465 NIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLF 524
Query: 171 DKMAIK----DIVSWNSILSACTRAGDMEKAFALFQEMPMKNTIS----WNTMLAGCLQR 222
+++K D+V++N+++S R G E+A ALF+EM T+ +NT++ L+
Sbjct: 525 CNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRD 584
Query: 223 GQFSEAVDLFDEMKT 237
G + +L EM++
Sbjct: 585 GDREASAELIKEMRS 599
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 112/247 (45%), Gaps = 16/247 (6%)
Query: 106 KMFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMPLKDLS----SFNILISGYSSCG 161
+M ++ P ++ ++ +L A A + + ISL M + +++ILI+ +
Sbjct: 71 EMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRS 130
Query: 162 EVLAARSIFDKMAI----KDIVSWNSILSACTRAGDMEKAFALFQEMPM----KNTISWN 213
++ A ++ KM +IV+ +S+L+ + + +A AL +M + NT+++N
Sbjct: 131 QLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFN 190
Query: 214 TMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYS 273
T++ G + SEA+ L D M C PD +T V++ G + +
Sbjct: 191 TLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQG 250
Query: 274 GLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVK----DIYCWNAIISGLALHGHGYAA 329
L + ++D K ++ AL +F + + K ++ ++++IS L +G A
Sbjct: 251 KLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDA 310
Query: 330 LKLFGYM 336
+L M
Sbjct: 311 SRLLSDM 317
>AT4G16470.1 | Symbols: | INVOLVED IN: biological_process unknown;
LOCATED IN: cellular_component unknown; EXPRESSED IN: 14
plant structures; EXPRESSED DURING: 4 anthesis, C
globular stage, petal differentiation and expansion
stage, D bilateral stage, E expanded cotyledon stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: CRR22 (CHLORORESPIRATORY REDUCTION22);
endonuclease (TAIR:AT1G11290.1); Has 12729 Blast hits to
4676 proteins in 132 species: Archae - 0; Bacteria - 0;
Metazoa - 31; Fungi - 25; Plants - 12474; Viruses - 0;
Other Eukaryotes - 199 (source: NCBI BLink). |
chr4:9287862-9289541 REVERSE
Length = 485
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 71/133 (53%)
Query: 206 MKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIK 265
+ + I WN M++G +Q+G E + ++ +M+ +PD T SV AC+ L LE G +
Sbjct: 155 LSDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKR 214
Query: 266 IHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGH 325
H I + S+ V +AL+DMY KC S ++F + +++ W ++ISG HG
Sbjct: 215 AHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGK 274
Query: 326 GYAALKLFGYMKK 338
LK F MK+
Sbjct: 275 VSEVLKCFEKMKE 287
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/292 (20%), Positives = 131/292 (44%), Gaps = 28/292 (9%)
Query: 45 GFRADNYTFPILLKAAGKNCASRIGFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADA 104
G + + T+ +LL+ + G H Q GF + +++ L+ +Y
Sbjct: 103 GLQVEPETYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYA-------- 154
Query: 105 CKMFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMP----LKDLSSFNILISGYSSC 160
+ DL+ WN+M+ Y G ++ + +++ M + D +F + S+
Sbjct: 155 --------LSDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSAL 206
Query: 161 GEV---LAARSIFDKMAIK-DIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTML 216
+ A ++ K IK +I+ ++++ + +F ++ +N I+W +++
Sbjct: 207 DRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLI 266
Query: 217 AGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLA 276
+G G+ SE + F++MK C P+ +T VL+AC H G ++ G + H Y++
Sbjct: 267 SGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWE-HFYSMKRDYG 325
Query: 277 SSPHVT--TALMDMYAKCGSIEQALQIFFKAQVKD-IYCWNAIISGLALHGH 325
P A++D + G +++A + K+ K+ W +++ +HG+
Sbjct: 326 IEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHGN 377
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/275 (20%), Positives = 117/275 (42%), Gaps = 17/275 (6%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTI 77
WN +I ++ G ++ + Y +M+ + D YTF + +A G H I
Sbjct: 161 WNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMI 220
Query: 78 KTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAIS 137
K +I V +AL++MY +D ++F+ + ++++ W S++ Y +G++ + +
Sbjct: 221 KRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLK 280
Query: 138 LFHMMPLK----DLSSFNILISGYSSCGEVLAARSIFDKMAIKDIVS-----WNSILSAC 188
F M + + +F ++++ + G V F M + + +++
Sbjct: 281 CFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDYGIEPEGQHYAAMVDTL 340
Query: 189 TRAGDMEKAFALFQEMPMK-NTISWNTMLAGCLQRGQ---FSEAVDLFDEMKTTNCLPDY 244
RAG +++A+ + P K + W ++L C G A F E+ TN +Y
Sbjct: 341 GRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHGNVKLLELAATKFLELDPTNG-GNY 399
Query: 245 LTATSVLSACAHLGSLETGIKIHVYAIYSGLASSP 279
+ + ++C G E K+ +G+ P
Sbjct: 400 VVFANGYASC---GLREAASKVRRKMENAGVKKDP 431
>AT1G11710.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3948886-3950859 FORWARD
Length = 657
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/283 (20%), Positives = 137/283 (48%), Gaps = 14/283 (4%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTI 77
+N I+ + G+ E A+ +M + D +T I+++ +N + F Q
Sbjct: 364 YNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQIS 423
Query: 78 KTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVK----DLVAWNSMLDAYASNGEME 133
+ I L++ + A A ++ +M V+ D +++ +++D Y G++E
Sbjct: 424 EKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLE 483
Query: 134 DAISLF----HMMPLKDLSSFNILISGYSSCGEVLAARSIFDKMAIKDIVSWNSILSACT 189
A+ ++ M +L +N +++G S G AA ++ + M IKDIV++N++L+
Sbjct: 484 RALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAMEIKDIVTYNTLLNESL 543
Query: 190 RAGDMEKAFALFQEMPMKN------TISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPD 243
+ G++E+A + +M ++ +++N M+ + G + +A ++ M +PD
Sbjct: 544 KTGNVEEADDILSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKFMVERGVVPD 603
Query: 244 YLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALM 286
+T +++++ + S E +++H Y I G+ H+ +++
Sbjct: 604 SITYGTLITSFSKHRSQEKVVELHDYLILQGVTPHEHIYLSIV 646
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 137/302 (45%), Gaps = 32/302 (10%)
Query: 58 KAAGKNCASRIGFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLV 117
KA + A RI G +K+G + AL++ YG + +A ++ + M K LV
Sbjct: 303 KAGRLDLAERI----RGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLV 358
Query: 118 A----WNSMLDAYASNGEMEDAISLFHMMPLKDLS----SFNILISGYSSCGEVLAA--- 166
+NS++ G++E A+S+ M K++ + I++ G G V A
Sbjct: 359 VNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEF 418
Query: 167 -RSIFDKMAIKDIVSWNSILSACTRAGDMEKAFALFQEMPMK----NTISWNTMLAGCLQ 221
R I +K ++DIV N+++ R + A + M ++ + IS+ T++ G L+
Sbjct: 419 QRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLK 478
Query: 222 RGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHV 281
G+ A++++D M N + + S+++ + + G+ A+ + + V
Sbjct: 479 EGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLS-----KRGMAGAAEAVVNAMEIKDIV 533
Query: 282 T-TALMDMYAKCGSIEQALQIFFKAQVKD------IYCWNAIISGLALHGHGYAALKLFG 334
T L++ K G++E+A I K Q +D + +N +I+ L G A ++
Sbjct: 534 TYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLK 593
Query: 335 YM 336
+M
Sbjct: 594 FM 595
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 97/203 (47%), Gaps = 10/203 (4%)
Query: 109 ENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMPLKDLS----SFNILISGYSSCGEVL 164
E V+D+V N+++ + + ++ A + M ++ LS SF LI GY G++
Sbjct: 424 EKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLE 483
Query: 165 AARSIFDKM----AIKDIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCL 220
A I+D M ++V +NSI++ ++ G A A+ M +K+ +++NT+L L
Sbjct: 484 RALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAMEIKDIVTYNTLLNESL 543
Query: 221 QRGQFSEAVDLFDEMKTTNCLPDY--LTATSVLSACAHLGSLETGIKIHVYAIYSGLASS 278
+ G EA D+ +M+ + +T +++ GS E ++ + + G+
Sbjct: 544 KTGNVEEADDILSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKFMVERGVVPD 603
Query: 279 PHVTTALMDMYAKCGSIEQALQI 301
L+ ++K S E+ +++
Sbjct: 604 SITYGTLITSFSKHRSQEKVVEL 626
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/277 (20%), Positives = 113/277 (40%), Gaps = 54/277 (19%)
Query: 115 DLVAWNSMLDAYASNGEMEDAISLFHMMPL-------KDLSSFNILISGYSSCGEVLAAR 167
++V++N M+D G+M A+ L M + + ++N +I+G+ G + A
Sbjct: 252 NVVSFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAE 311
Query: 168 SIFDKMAIKDI----VSWNSILSACTRAGDMEKAFALFQEMPMK----NTISWNTMLAGC 219
I M + ++ +++ A RAG ++A L EM K NT+ +N+++
Sbjct: 312 RIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWL 371
Query: 220 LQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIK-------------- 265
G A+ + +M + N D T V+ G ++ ++
Sbjct: 372 FMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDI 431
Query: 266 ------IHVYAIYSGLASSPHVTTA---------------LMDMYAKCGSIEQALQIFFK 304
+H + LA + + + L+D Y K G +E+AL+I+
Sbjct: 432 VCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDG 491
Query: 305 ----AQVKDIYCWNAIISGLALHGHGYAALKLFGYMK 337
+ ++ +N+I++GL+ G AA + M+
Sbjct: 492 MIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAME 528
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 87/201 (43%), Gaps = 36/201 (17%)
Query: 144 LKDLSSFNILISGYSSCGEVLAARSIFDKM----AIKDIVSWNSILSACTRAGDMEKAFA 199
++++++FN++I + ++ A S+F +M ++VS+N ++ + GDM A
Sbjct: 215 VENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRFALQ 274
Query: 200 LFQEMPMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGS 259
L +M M + G F P+ +T SV++ G
Sbjct: 275 LLGKMGMMS--------------GNFVS--------------PNAVTYNSVINGFCKAGR 306
Query: 260 LETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQI----FFKAQVKDIYCWNA 315
L+ +I + SG+ + AL+D Y + GS ++AL++ K V + +N+
Sbjct: 307 LDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNS 366
Query: 316 IISGLALHGHGYAALKLFGYM 336
I+ L + G A+ + M
Sbjct: 367 IVYWLFMEGDIEGAMSVLRDM 387
>AT1G63150.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23419399-23421288 FORWARD
Length = 629
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 147/327 (44%), Gaps = 17/327 (5%)
Query: 29 GNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTIKTGFYRHIFVQ 88
G+ + A+ M+ +A+ F ++ + K + + G ++
Sbjct: 237 GDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTY 296
Query: 89 TALINMYGTLHCTADACKMFENMPVK----DLVAWNSMLDAYASNGEMEDAISLFHMMPL 144
+LIN +DA ++ NM K ++V +N+++DA+ G++ +A L M
Sbjct: 297 NSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQ 356
Query: 145 K----DLSSFNILISGYSSCGEVLAARSIFDKMAIKD----IVSWNSILSACTRAGDMEK 196
+ D ++N+LI+G+ + A+ +F M KD I ++N++++ + +E
Sbjct: 357 RSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVED 416
Query: 197 AFALFQEMPMK----NTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLS 252
LF+EM + NT+++ T++ G Q G A +F +M + D +T + +L
Sbjct: 417 GVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLH 476
Query: 253 ACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVK-DIY 311
G L+T + I Y S + + + +++ K G + +A +F +K D+
Sbjct: 477 GLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVV 536
Query: 312 CWNAIISGLALHGHGYAALKLFGYMKK 338
+N +ISGL A LF MK+
Sbjct: 537 TYNTMISGLCSKRLLQEADDLFRKMKE 563
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 132/305 (43%), Gaps = 31/305 (10%)
Query: 52 TFPILLKAAGKNCASRIGFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENM 111
T P G C R FA +G YR I L N + DA +F +M
Sbjct: 26 TVPSFFNLCGSGCWER-SFAS-----ASGDYREI-----LRNRLSDIIKVDDAVDLFGDM 74
Query: 112 ----PVKDLVAWNSMLDAYASNGEMEDAISLFHMMPL----KDLSSFNILISGYSSCGEV 163
P +V +N +L A A + E ISL M DL +++I I+ + ++
Sbjct: 75 VKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQL 134
Query: 164 LAARSIFDKMAI----KDIVSWNSILSACTRAGDMEKAFALFQEMP----MKNTISWNTM 215
A ++ KM DIV+ +S+L+ + + A AL +M +T ++ T+
Sbjct: 135 SLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTL 194
Query: 216 LAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGL 275
+ G + SEAV L D+M C PD +T +V++ G ++ + + + +
Sbjct: 195 IHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARI 254
Query: 276 ASSPHVTTALMDMYAKCGSIEQALQIFFKAQVK----DIYCWNAIISGLALHGHGYAALK 331
++ + ++D K +E A+ +F + + K ++ +N++I+ L +G A +
Sbjct: 255 KANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASR 314
Query: 332 LFGYM 336
L M
Sbjct: 315 LLSNM 319
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/318 (21%), Positives = 138/318 (43%), Gaps = 20/318 (6%)
Query: 41 MQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTIKTGFYRHIFVQTALINMYGTLHC 100
MQ G D YT+ I + + + A + +K G+ I ++L+N Y
Sbjct: 109 MQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKR 168
Query: 101 TADACKMFENMP----VKDLVAWNSMLDAYASNGEMEDAISLFHMMPLK----DLSSFNI 152
+DA + + M D + +++ + + +A++L M + DL ++
Sbjct: 169 ISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGT 228
Query: 153 LISGYSSCGEVLAARSIFDKMA---IK-DIVSWNSILSACTRAGDMEKAFALFQEMPMK- 207
+++G G++ A ++ +KM IK ++V +N+I+ + + +E A LF EM K
Sbjct: 229 VVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKG 288
Query: 208 ---NTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGI 264
N +++N+++ G++S+A L M P+ +T +++ A G L
Sbjct: 289 IRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAE 348
Query: 265 KIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKD----IYCWNAIISGL 320
K+H I + L++ + +++A Q+F KD I +N +I+G
Sbjct: 349 KLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGF 408
Query: 321 ALHGHGYAALKLFGYMKK 338
++LF M +
Sbjct: 409 CKCKRVEDGVELFREMSQ 426
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 106/220 (48%), Gaps = 22/220 (10%)
Query: 87 VQT--ALINMYGTLHCTADACKMFENMPVKDLVA----WNSMLDAYASNGEMEDAISLFH 140
+QT LIN + D ++F M + LV + +++ + G+ + A +F
Sbjct: 398 IQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFK 457
Query: 141 MM-----PLKDLSSFNILISGYSSCGEVLAARSIFDKMAIKD----IVSWNSILSACTRA 191
M P D+ +++IL+ G S G++ A IF + + I +N+++ +A
Sbjct: 458 QMVSNRVP-TDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKA 516
Query: 192 GDMEKAFALFQEMPMK-NTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSV 250
G + +A+ LF + +K + +++NTM++G + EA DLF +MK LP+ T ++
Sbjct: 517 GKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTL 576
Query: 251 LSA----CAHLGSLETGIKIHVYAIYSGLASSPHVTTALM 286
+ A C S E IK + + G AS+ + T ++
Sbjct: 577 IRANLRDCDRAASAEL-IKEMRSSGFVGDASTISLVTNML 615
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 87/165 (52%), Gaps = 10/165 (6%)
Query: 106 KMFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMPLKDLS----SFNILISGYSSCG 161
+M N D++ ++ +L S G+++ A+ +F + ++ +N +I G G
Sbjct: 458 QMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAG 517
Query: 162 EVLAARSIFDKMAIK-DIVSWNSILSACTRAGDMEKAFALFQEMP----MKNTISWNTML 216
+V A +F ++IK D+V++N+++S +++A LF++M + N+ ++NT++
Sbjct: 518 KVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLI 577
Query: 217 AGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLE 261
L+ + + +L EM+++ + D T S+++ H G L+
Sbjct: 578 RANLRDCDRAASAELIKEMRSSGFVGDAST-ISLVTNMLHDGRLD 621
>AT1G62930.1 | Symbols: | INVOLVED IN: biological_process unknown;
EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14
growth stages; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT1G63130.1); Has
29147 Blast hits to 6292 proteins in 192 species: Archae
- 8; Bacteria - 22; Metazoa - 1258; Fungi - 858; Plants
- 25291; Viruses - 0; Other Eukaryotes - 1710 (source:
NCBI BLink). | chr1:23306534-23308423 FORWARD
Length = 629
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 124/257 (48%), Gaps = 20/257 (7%)
Query: 102 ADACKMFENMPVK----DLVAWNSMLDAYASNGEMEDAISLFHMMPLK----DLSSFNIL 153
+DA ++ +M + ++V +++++DA+ G++ +A L+ M + D+ +++ L
Sbjct: 307 SDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 366
Query: 154 ISGYSSCGEVLAARSIFDKMAIKD----IVSWNSILSACTRAGDMEKAFALFQEMPMK-- 207
I+G+ + A+ +F+ M KD +V++N+++ +A +E+ LF+EM +
Sbjct: 367 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGL 426
Query: 208 --NTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIK 265
NT+++NT++ G Q G A +F +M + PD +T + +L G LE +
Sbjct: 427 VGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALV 486
Query: 266 IHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIF----FKAQVKDIYCWNAIISGLA 321
+ Y S + + +++ K G +E +F K ++ + +ISG
Sbjct: 487 VFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFC 546
Query: 322 LHGHGYAALKLFGYMKK 338
G A LF MK+
Sbjct: 547 RKGLKEEADALFREMKE 563
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 116/247 (46%), Gaps = 16/247 (6%)
Query: 106 KMFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMP-LK---DLSSFNILISGYSSCG 161
+M ++ P+ +V +N +L A A + + ISL M L+ DL S+NILI+ +
Sbjct: 70 EMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRS 129
Query: 162 EVLAARSIFDKMAI----KDIVSWNSILSACTRAGDMEKAFALFQEMPM----KNTISWN 213
++ A ++ KM DIV+ +S+L+ + +A AL +M + NT+++N
Sbjct: 130 QLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFN 189
Query: 214 TMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYS 273
T++ G + SEAV L D M C PD T +V++ G ++ + +
Sbjct: 190 TLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKG 249
Query: 274 GLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVK----DIYCWNAIISGLALHGHGYAA 329
+ + + T ++D ++ AL +F + K ++ +N++I L +G A
Sbjct: 250 KIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDA 309
Query: 330 LKLFGYM 336
+L M
Sbjct: 310 SRLLSDM 316
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 105/254 (41%), Gaps = 53/254 (20%)
Query: 52 TFPILLKAAGKNCASRIGFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACK-MFEN 110
TF L+ A K + + IK IF ++LIN + +H D K MFE
Sbjct: 327 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF-CMHDRLDEAKHMFEL 385
Query: 111 MPVKD----LVAWNSMLDAYASNGEMEDAISLFHMMPLKDLS----SFNILISGYSSCGE 162
M KD +V +N+++ + +E+ + LF M + L ++N LI G G+
Sbjct: 386 MISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGD 445
Query: 163 VLAARSIFDKMAIK----DIVSWNSILSACTRAGDMEKAFALF---QEMPMK-------- 207
A+ IF KM DI++++ +L + G +EKA +F Q+ M+
Sbjct: 446 CDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNI 505
Query: 208 ----------------------------NTISWNTMLAGCLQRGQFSEAVDLFDEMKTTN 239
N I + TM++G ++G EA LF EMK
Sbjct: 506 MIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDG 565
Query: 240 CLPDYLTATSVLSA 253
LP+ T +++ A
Sbjct: 566 TLPNSGTYNTLIRA 579
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 89/170 (52%), Gaps = 17/170 (10%)
Query: 106 KMFENMPVKDLVAWNSMLDAYASNGEMEDAISLFH------MMPLKDLSSFNILISGYSS 159
KM + D++ ++ +LD G++E A+ +F M P D+ ++NI+I G
Sbjct: 455 KMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEP--DIYTYNIMIEGMCK 512
Query: 160 CGEVLAARSIFDKMAIK----DIVSWNSILSACTRAGDMEKAFALFQEMP----MKNTIS 211
G+V +F +++K +++ + +++S R G E+A ALF+EM + N+ +
Sbjct: 513 AGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGT 572
Query: 212 WNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLE 261
+NT++ L+ G + + +L EM++ + D T + V++ H G LE
Sbjct: 573 YNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML-HDGRLE 621
>AT5G01110.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:42114-44303 REVERSE
Length = 729
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 143/326 (43%), Gaps = 20/326 (6%)
Query: 19 NEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTIK 78
N +I + +G E A Y + G + YT I++ A K+ F Q +
Sbjct: 204 NALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQE 263
Query: 79 TGFYRHIFVQTALINMYGTLHCTADACKMFENMPVK----DLVAWNSMLDAYASNGEMED 134
G Y I LI+ Y + +A ++ MP K + +N++++ +G+ E
Sbjct: 264 KGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYER 323
Query: 135 AISLFHMMPLKDLS----SFNILISGYSSCGEVLAARSIFDKM----AIKDIVSWNSILS 186
A +F M LS ++ L+ G+V+ +F M + D+V ++S++S
Sbjct: 324 AKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMS 383
Query: 187 ACTRAGDMEKAFALFQEMP----MKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLP 242
TR+G+++KA F + + + + + ++ G ++G S A++L +EM C
Sbjct: 384 LFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAM 443
Query: 243 DYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIF 302
D +T ++L L K+ L + T L+D + K G+++ A+++F
Sbjct: 444 DVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELF 503
Query: 303 FKAQVK----DIYCWNAIISGLALHG 324
K + K D+ +N ++ G G
Sbjct: 504 QKMKEKRIRLDVVTYNTLLDGFGKVG 529
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/328 (20%), Positives = 142/328 (43%), Gaps = 20/328 (6%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTI 77
+N +I + G E+A M GF YT+ ++ K+ + +
Sbjct: 273 YNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEML 332
Query: 78 KTGFYRHIFVQTALINMYGTLHCTADACKMFENMP----VKDLVAWNSMLDAYASNGEME 133
++G +L+ + K+F +M V DLV ++SM+ + +G ++
Sbjct: 333 RSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLD 392
Query: 134 DAISLFHMMP----LKDLSSFNILISGYSSCGEVLAARSIFDKMAIK----DIVSWNSIL 185
A+ F+ + + D + ILI GY G + A ++ ++M + D+V++N+IL
Sbjct: 393 KALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTIL 452
Query: 186 SACTRAGDMEKAFALFQEMPMK----NTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCL 241
+ + +A LF EM + ++ + ++ G + G A++LF +MK
Sbjct: 453 HGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIR 512
Query: 242 PDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQI 301
D +T ++L +G ++T +I + + +P + L++ G + +A ++
Sbjct: 513 LDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRV 572
Query: 302 FFKAQVKDI----YCWNAIISGLALHGH 325
+ + K+I N++I G G+
Sbjct: 573 WDEMISKNIKPTVMICNSMIKGYCRSGN 600
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/286 (19%), Positives = 124/286 (43%), Gaps = 24/286 (8%)
Query: 12 SLEVRRWNEIIK---KHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRI 68
+++V +N I+ K ++G A++ + M D+YT IL+ K +
Sbjct: 442 AMDVVTYNTILHGLCKRKMLGEADKL---FNEMTERALFPDSYTLTILIDGHCKLGNLQN 498
Query: 69 GFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDL----VAWNSMLD 124
+ + + L++ +G + A +++ +M K++ ++++ +++
Sbjct: 499 AMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVN 558
Query: 125 AYASNGEMEDAISLFHMMPLKDLSSF----NILISGYSSCGEVLAARSIFDKMA----IK 176
A S G + +A ++ M K++ N +I GY G S +KM +
Sbjct: 559 ALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVP 618
Query: 177 DIVSWNSILSACTRAGDMEKAFALFQEMP------MKNTISWNTMLAGCLQRGQFSEAVD 230
D +S+N+++ R +M KAF L ++M + + ++N++L G ++ Q EA
Sbjct: 619 DCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEV 678
Query: 231 LFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLA 276
+ +M PD T T +++ +L +IH + G +
Sbjct: 679 VLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFS 724
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 99/243 (40%), Gaps = 22/243 (9%)
Query: 21 IIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTIKTG 80
+I H +GN + A+ + M+ R D T+ LL GK +
Sbjct: 486 LIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKE 545
Query: 81 FYRHIFVQTALINMYGTLHCTADACKMFENMPVKDL----VAWNSMLDAYASNGEMEDAI 136
+ L+N + A+A ++++ M K++ + NSM+ Y +G D
Sbjct: 546 ILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGE 605
Query: 137 SLFHMMP----LKDLSSFNILISGYSSCGEVLAARSIFDKMA------IKDIVSWNSILS 186
S M + D S+N LI G+ + A + KM + D+ ++NSIL
Sbjct: 606 SFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILH 665
Query: 187 ACTRAGDMEKAFALFQEM------PMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNC 240
R M++A + ++M P ++T + M+ G + + +EA + DEM
Sbjct: 666 GFCRQNQMKEAEVVLRKMIERGVNPDRST--YTCMINGFVSQDNLTEAFRIHDEMLQRGF 723
Query: 241 LPD 243
PD
Sbjct: 724 SPD 726
>AT1G63080.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23388884-23390728 REVERSE
Length = 614
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 128/279 (45%), Gaps = 20/279 (7%)
Query: 80 GFYRHIFVQTALINMYGTLHCTADACKMFENMPVK----DLVAWNSMLDAYASNGEMEDA 135
G +F ++LI+ +DA ++ +M + ++V +NS++DA+A G++ +A
Sbjct: 270 GIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEA 329
Query: 136 ISLFHMMPLKDLS----SFNILISGYSSCGEVLAARSIFDKMAIKD----IVSWNSILSA 187
LF M + + ++N LI+G+ + A+ IF M KD +V++N++++
Sbjct: 330 EKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLING 389
Query: 188 CTRAGDMEKAFALFQEMPMK----NTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPD 243
+A + LF++M + NT+++ T++ G Q A +F +M + P+
Sbjct: 390 FCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPN 449
Query: 244 YLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIF- 302
+T ++L G LE + + Y S + + + + K G +E +F
Sbjct: 450 IMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFC 509
Query: 303 ---FKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMKK 338
K D+ +N +ISG G A LF MK+
Sbjct: 510 SLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKE 548
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 153/332 (46%), Gaps = 23/332 (6%)
Query: 29 GNAEQAVLTYVNMQVH-GFRADNYTFPILLKAAGKNCASRIGFAFHGQTIKTGFYRHIFV 87
GN + V+ V G++ D TF L+ ++ + A + + G +
Sbjct: 148 GNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVT 207
Query: 88 QTALIN---MYGTLHCTADACKMFENMPVK-DLVAWNSMLDAYASNGEMEDAISLFHMMP 143
A+IN G + E ++ D+V +++++D+ ++DA++LF M
Sbjct: 208 YGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMD 267
Query: 144 LK----DLSSFNILISGYSSCGE-VLAARSIFDKMAIK---DIVSWNSILSACTRAGDME 195
K D+ +++ LIS + G A+R + D + K ++V++NS++ A + G +
Sbjct: 268 NKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLI 327
Query: 196 KAFALFQEMPMK----NTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVL 251
+A LF EM + N +++N+++ G + EA +F M + +CLPD +T +++
Sbjct: 328 EAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLI 387
Query: 252 SACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKD-- 309
+ + G+++ GL + T L+ + + + A Q+ FK V D
Sbjct: 388 NGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNA-QMVFKQMVSDGV 446
Query: 310 ---IYCWNAIISGLALHGHGYAALKLFGYMKK 338
I +N ++ GL +G A+ +F Y++K
Sbjct: 447 HPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQK 478
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/332 (19%), Positives = 150/332 (45%), Gaps = 28/332 (8%)
Query: 30 NAEQAVLTYVNMQVHGFRADNYTFPILLKAA---GK-NCASRIGFAFHGQTIKTGFYRHI 85
+ + A+ + M G R D +T+ L+ G+ + ASR+ ++ ++
Sbjct: 255 HVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRL----LSDMLERKINPNV 310
Query: 86 FVQTALINMYGTLHCTADACKMFENMPVK----DLVAWNSMLDAYASNGEMEDAISLFHM 141
+LI+ + +A K+F+ M + ++V +NS+++ + + +++A +F +
Sbjct: 311 VTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTL 370
Query: 142 MP----LKDLSSFNILISGYSSCGEVLAARSIFDKMA----IKDIVSWNSILSACTRAGD 193
M L D+ ++N LI+G+ +V+ +F M+ + + V++ +++ +A D
Sbjct: 371 MVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASD 430
Query: 194 MEKAFALFQEMPMK----NTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATS 249
+ A +F++M N +++NT+L G + G+ +A+ +F+ ++ + PD T
Sbjct: 431 CDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNI 490
Query: 250 VLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQ--- 306
+ G +E G + G+ ++ + K G E+A +F K +
Sbjct: 491 MSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDG 550
Query: 307 -VKDIYCWNAIISGLALHGHGYAALKLFGYMK 337
+ D +N +I G A+ +L M+
Sbjct: 551 PLPDSGTYNTLIRAHLRDGDKAASAELIKEMR 582
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 88/163 (53%), Gaps = 17/163 (10%)
Query: 115 DLVAWNSMLDAYASNGEMEDAISLFH------MMPLKDLSSFNILISGYSSCGEVLAARS 168
+++ +N++LD NG++E A+ +F M P D+ ++NI+ G G+V
Sbjct: 449 NIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEP--DIYTYNIMSEGMCKAGKVEDGWD 506
Query: 169 IFDKMAIK----DIVSWNSILSACTRAGDMEKAFALFQEM----PMKNTISWNTMLAGCL 220
+F +++K D++++N+++S + G E+A+ LF +M P+ ++ ++NT++ L
Sbjct: 507 LFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHL 566
Query: 221 QRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETG 263
+ G + + +L EM++ D T +++ H G L+ G
Sbjct: 567 RDGDKAASAELIKEMRSCRFAGDAST-YGLVTDMLHDGRLDKG 608
>AT3G18970.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:6543699-6545117 REVERSE
Length = 472
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 123/265 (46%), Gaps = 27/265 (10%)
Query: 67 RIGFAFHGQTIKTGF-YRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDA 125
R+G HG K GF Y + T L++ Y A K+F+ MP + V WN+M+
Sbjct: 128 RVGRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGG 187
Query: 126 YAS-----NGEMEDAISLFH--------MMPLKDLSSFNILISGYSSCGEVLAARSI--- 169
Y S N A+ LF + P ++ ++S S G +L S+
Sbjct: 188 YCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTD--TTMVCVLSAISQTG-LLEIGSLVHG 244
Query: 170 -FDKMAIK---DIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAGCLQRGQF 225
+K+ D+ +++ ++ G + AF++F+ M +KN +W +M G G+
Sbjct: 245 YIEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRG 304
Query: 226 SEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVT--T 283
+E +L + M + P+ +T TS+LSA H+G +E GI++ ++ + +P +
Sbjct: 305 NETPNLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIEL-FKSMKTRFGVTPVIEHYG 363
Query: 284 ALMDMYAKCGSIEQALQIFFKAQVK 308
++D+ K G I++A Q +K
Sbjct: 364 CIVDLLGKAGRIQEAYQFILAMPIK 388
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 84/165 (50%), Gaps = 13/165 (7%)
Query: 183 SILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAG-CLQRGQFS----EAVDLFDEMK- 236
++L + GD+ A +F EMP + +++WN M+ G C + + + +A+ LF
Sbjct: 152 TLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRFSC 211
Query: 237 -TTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVT----TALMDMYAK 291
+ P T VLSA + G LE G +H Y L +P V TAL+DMY+K
Sbjct: 212 CGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYI--EKLGFTPEVDVFIGTALVDMYSK 269
Query: 292 CGSIEQALQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYM 336
CG + A +F +VK+++ W ++ +GLAL+G G L M
Sbjct: 270 CGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRM 314
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 92/216 (42%), Gaps = 18/216 (8%)
Query: 10 MPSLEVRRWNEIIK---KHMLVGN--AEQAVLTYVNMQV--HGFRADNYTFPILLKAAGK 62
MP WN +I H GN A +A++ + G R + T +L A +
Sbjct: 173 MPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQ 232
Query: 63 NCASRIGFAFHGQTIKTGFYRHI--FVQTALINMYGTLHCTADACKMFENMPVKDLVAWN 120
IG HG K GF + F+ TAL++MY C +A +FE M VK++ W
Sbjct: 233 TGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWT 292
Query: 121 SMLDAYASNGEMEDAISLFHMMPLKDLS----SFNILISGYSSCGEVLAARSIFDKMAIK 176
SM A NG + +L + M + +F L+S Y G V +F M +
Sbjct: 293 SMATGLALNGRGNETPNLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTR 352
Query: 177 DIVS-----WNSILSACTRAGDMEKAFALFQEMPMK 207
V+ + I+ +AG +++A+ MP+K
Sbjct: 353 FGVTPVIEHYGCIVDLLGKAGRIQEAYQFILAMPIK 388
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE
Length = 634
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/323 (21%), Positives = 141/323 (43%), Gaps = 20/323 (6%)
Query: 31 AEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTIKTGFYRHIFVQTA 90
A +AV M G + + T+ +++ K + + + + +
Sbjct: 206 ASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNT 265
Query: 91 LINMYGTLHCTADACKMFENMPVK----DLVAWNSMLDAYASNGEMEDAISLFHMMPLK- 145
+I+ DA +F+ M K ++V ++S++ S G DA L M K
Sbjct: 266 IIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK 325
Query: 146 ---DLSSFNILISGYSSCGEVLAARSIFDKMAIK----DIVSWNSILSACTRAGDMEKAF 198
+L +FN LI + G+ + A ++D M + DI ++NS+++ ++KA
Sbjct: 326 INPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAK 385
Query: 199 ALFQEMPMKN----TISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSAC 254
+F+ M K+ +++NT++ G + + + +LF EM + D +T T+++
Sbjct: 386 QMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGL 445
Query: 255 AHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFF---KAQVK-DI 310
H G + K+ + G+ + L+D G +E+AL++F K+++K DI
Sbjct: 446 FHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDI 505
Query: 311 YCWNAIISGLALHGHGYAALKLF 333
Y + +I G+ G LF
Sbjct: 506 YIYTTMIEGMCKAGKVDDGWDLF 528
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/327 (22%), Positives = 141/327 (43%), Gaps = 22/327 (6%)
Query: 33 QAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTIKTGFYRHIFVQTALI 92
AV M G+R D TF L+ + + A + ++ G ++ ++
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232
Query: 93 NMYGTLHCTADACKMFENMPVK----DLVAWNSMLDAYASNGEMEDAISLFHMMPLK--- 145
N T A + M D+V +N+++D+ ++DA++LF M K
Sbjct: 233 NGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIR 292
Query: 146 -DLSSFNILISGYSSCGEVLAARSIFDKMAIKDI----VSWNSILSACTRAGDMEKAFAL 200
++ +++ LIS S G A + M K I V++N+++ A + G +A L
Sbjct: 293 PNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKL 352
Query: 201 FQEMPMK----NTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAH 256
+ +M + + ++N+++ G + +A +F+ M + +C PD +T +++
Sbjct: 353 YDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCK 412
Query: 257 LGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKD-----IY 311
+E G ++ + GL T L+ G + A Q FK V D I
Sbjct: 413 SKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNA-QKVFKQMVSDGVPPDIM 471
Query: 312 CWNAIISGLALHGHGYAALKLFGYMKK 338
++ ++ GL +G AL++F YM+K
Sbjct: 472 TYSILLDGLCNNGKLEKALEVFDYMQK 498
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/314 (19%), Positives = 138/314 (43%), Gaps = 24/314 (7%)
Query: 43 VHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTA 102
VHG YT+ IL+ + + A G+ +K G+ I ++L+N Y +
Sbjct: 117 VHGL----YTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172
Query: 103 DACKMFENMP----VKDLVAWNSMLDAYASNGEMEDAISLFHMMPLK----DLSSFNILI 154
DA + + M D + + +++ + + +A++L M + +L ++ +++
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232
Query: 155 SGYSSCGEVLAARSIFDKMAI----KDIVSWNSILSACTRAGDMEKAFALFQEMPMK--- 207
+G G+ A ++ +KM D+V +N+I+ + + ++ A LF+EM K
Sbjct: 233 NGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIR 292
Query: 208 -NTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKI 266
N ++++++++ G++S+A L +M P+ +T +++ A G K+
Sbjct: 293 PNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKL 352
Query: 267 HVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIF----FKAQVKDIYCWNAIISGLAL 322
+ I + +L++ + +++A Q+F K D+ +N +I G
Sbjct: 353 YDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCK 412
Query: 323 HGHGYAALKLFGYM 336
+LF M
Sbjct: 413 SKRVEDGTELFREM 426
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 111/246 (45%), Gaps = 16/246 (6%)
Query: 107 MFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMP----LKDLSSFNILISGYSSCGE 162
M ++ P+ +V +N +L A A + + ISL M + L ++NILI+ + +
Sbjct: 76 MVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQ 135
Query: 163 VLAARSIFDKMAI----KDIVSWNSILSACTRAGDMEKAFALFQEMP----MKNTISWNT 214
+ A ++ KM IV+ +S+L+ + A AL +M +TI++ T
Sbjct: 136 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 195
Query: 215 MLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSG 274
++ G + SEAV L D M C P+ +T V++ G + + + +
Sbjct: 196 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAK 255
Query: 275 LASSPHVTTALMDMYAKCGSIEQALQIFFKAQVK----DIYCWNAIISGLALHGHGYAAL 330
+ + + ++D K ++ AL +F + + K ++ ++++IS L +G A
Sbjct: 256 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 315
Query: 331 KLFGYM 336
+L M
Sbjct: 316 QLLSDM 321
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 84/168 (50%), Gaps = 18/168 (10%)
Query: 103 DACKMFENMP----VKDLVAWNSMLDAYASNGEMEDAISLFHMM-----PLKDLSSFNIL 153
D ++F M V D V + +++ +G+ ++A +F M P D+ +++IL
Sbjct: 418 DGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVP-PDIMTYSIL 476
Query: 154 ISGYSSCGEVLAARSIFD---KMAIK-DIVSWNSILSACTRAGDMEKAFALFQEMPMK-- 207
+ G + G++ A +FD K IK DI + +++ +AG ++ + LF + +K
Sbjct: 477 LDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGV 536
Query: 208 --NTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSA 253
N +++NTM++G + EA L +MK LP+ T +++ A
Sbjct: 537 KPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRA 584
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 109/232 (46%), Gaps = 23/232 (9%)
Query: 49 DNYTFPILLKAAGKNCASRIGFAFHGQTIKTGFYRHIFVQTALINMYGTLH---CTADAC 105
D T+ L+K K+ G + G T LI G H C +A
Sbjct: 399 DVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQ--GLFHDGDCD-NAQ 455
Query: 106 KMFENMPVK----DLVAWNSMLDAYASNGEMEDAISLFHMMPLK----DLSSFNILISGY 157
K+F+ M D++ ++ +LD +NG++E A+ +F M D+ + +I G
Sbjct: 456 KVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGM 515
Query: 158 SSCGEVLAARSIFDKMAIK----DIVSWNSILSACTRAGDMEKAFALFQEM----PMKNT 209
G+V +F +++K ++V++N+++S +++A+AL ++M P+ N+
Sbjct: 516 CKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNS 575
Query: 210 ISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLE 261
++NT++ L+ G + + +L EM++ + D T +++ H G L+
Sbjct: 576 GTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDAST-IGLVANMLHDGRLD 626
>AT2G18940.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:8203873-8206341 REVERSE
Length = 822
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 121/255 (47%), Gaps = 21/255 (8%)
Query: 104 ACKMFENMPVK----DLVAWNSMLDAYASNGEMEDAISLFHMM----PLKDLSSFNILIS 155
A K+ + +P++ D+ A+ ++L AY+ G+ E AI LF M P L ++N+++
Sbjct: 194 AAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILD 253
Query: 156 GYSSCGEV-LAARSIFDKMAIK----DIVSWNSILSACTRAGDMEKAFALFQEMPM---- 206
+ G + D+M K D + +++LSAC R G + +A F E+
Sbjct: 254 VFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYE 313
Query: 207 KNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKI 266
T+++N +L + G ++EA+ + EM+ +C D +T +++A G + +
Sbjct: 314 PGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGV 373
Query: 267 HVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQ----VKDIYCWNAIISGLAL 322
G+ + T ++D Y K G ++AL++F+ + V + +NA++S L
Sbjct: 374 IEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGK 433
Query: 323 HGHGYAALKLFGYMK 337
+K+ MK
Sbjct: 434 KSRSNEMIKMLCDMK 448
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 125/300 (41%), Gaps = 17/300 (5%)
Query: 11 PSLEVRRWNEIIKKHMLVGNAEQAVLTYVN-MQVHGFRADNYTFPILLKAAGKNCASRIG 69
PS + +N I+ +G + + +L ++ M+ G + D +T +L A + R
Sbjct: 241 PSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREA 300
Query: 70 FAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADAC----KMFENMPVKDLVAWNSMLDA 125
F + G+ AL+ ++G +A +M EN D V +N ++ A
Sbjct: 301 KEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAA 360
Query: 126 YASNGEMEDAISLFHMMPLKDLS----SFNILISGYSSCGEVLAARSIFDKMA----IKD 177
Y G ++A + MM K + ++ +I Y G+ A +F M + +
Sbjct: 361 YVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPN 420
Query: 178 IVSWNSILSACTRAGDMEKAFALFQEMPMK----NTISWNTMLAGCLQRGQFSEAVDLFD 233
++N++LS + + + +M N +WNTMLA C +G +F
Sbjct: 421 TCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFR 480
Query: 234 EMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCG 293
EMK+ PD T +++SA GS K++ +G + AL++ A+ G
Sbjct: 481 EMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKG 540
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 107/236 (45%), Gaps = 18/236 (7%)
Query: 40 NMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTIKTG--FYRHIFVQTALINMYG- 96
+M+ GF+ ++ ++L+ K + +G IK G F + ++T L+ +
Sbjct: 551 DMKSKGFKPTETSYSLMLQCYAKG-GNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKC 609
Query: 97 -TLHCTADACKMFENMPVK-DLVAWNSMLDAYASNGEMEDAISLFHMMPLK----DLSSF 150
L + A +F+ K D+V +NSML + N + A + + DL ++
Sbjct: 610 RALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTY 669
Query: 151 NILISGYSSCGEVLAARSIF---DKMAIK-DIVSWNSILSACTRAGDMEKAFALFQEMPM 206
N L+ Y GE A I +K +K D+VS+N+++ R G M++A + EM
Sbjct: 670 NSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTE 729
Query: 207 KNT----ISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLG 258
+ ++NT ++G G F+E D+ + M +C P+ LT V+ G
Sbjct: 730 RGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAG 785
>AT2G41720.2 | Symbols: EMB2654 | EMB2654 (EMBRYO DEFECTIVE 2654) |
chr2:17403861-17406648 REVERSE
Length = 683
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 137/313 (43%), Gaps = 22/313 (7%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTI 77
+N +I+ H +QA + MQ + D T+ L+ A G+ R +
Sbjct: 14 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDML 73
Query: 78 KTGFYRHIFVQTALINMYGTLHCTADAC----KMFENMPVKDLVAWNSMLDAYASNGEME 133
+ LIN G+ +A KM +N DLV N +L AY S +
Sbjct: 74 RAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYS 133
Query: 134 DAISLFHMMP----LKDLSSFNILISGYSSCGEVLAARSIFDKMAIK------DIVSWNS 183
A+S F +M D ++FNI+I S G+ A +F+ M K D+V++ S
Sbjct: 134 KALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTS 193
Query: 184 ILSACTRAGDMEKAFALFQEMPMK----NTISWNTMLAGCLQRGQFSEAVDLFDEMKTTN 239
I+ + G++E A+F+ M + N +S+N ++ G A+ + ++K
Sbjct: 194 IMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNG 253
Query: 240 CLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTT--ALMDMYAKCGSIEQ 297
+PD ++ T +L++ S + G V+ + P+V T AL+D Y G + +
Sbjct: 254 IIPDVVSYTCLLNSYGR--SRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAE 311
Query: 298 ALQIFFKAQVKDI 310
A++IF + + I
Sbjct: 312 AVEIFRQMEQDGI 324
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/313 (19%), Positives = 133/313 (42%), Gaps = 16/313 (5%)
Query: 14 EVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFH 73
+V + I+ + + G E + M G + + ++ L+ A + S +
Sbjct: 187 DVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVL 246
Query: 74 GQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVK----DLVAWNSMLDAYASN 129
G + G + T L+N YG A ++F M + ++V +N+++DAY SN
Sbjct: 247 GDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSN 306
Query: 130 GEMEDAISLFHMMPLK----DLSSFNILISGYSSCGEVLAARSIFDKMAIKDI----VSW 181
G + +A+ +F M ++ S L++ S + + ++ + I ++
Sbjct: 307 GFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAY 366
Query: 182 NSILSACTRAGDMEKAFALFQEMPMK----NTISWNTMLAGCLQRGQFSEAVDLFDEMKT 237
NS + + A ++EKA AL+Q M K +++++ +++G + ++ EA+ EM+
Sbjct: 367 NSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMED 426
Query: 238 TNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQ 297
+ +SVL A + G + I +G T+++ Y +
Sbjct: 427 LSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGK 486
Query: 298 ALQIFFKAQVKDI 310
A ++F + + I
Sbjct: 487 ACELFLEMEANGI 499
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 108/244 (44%), Gaps = 22/244 (9%)
Query: 115 DLVAWNSMLDAYASNGEMEDAISLFHMM------PLKDLSSFNILISGYSSCGEVLAARS 168
D ++++++A+ G+ A++L M P + S++N LI+ S G A
Sbjct: 45 DAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSR--STYNNLINACGSSGNWREALE 102
Query: 169 IFDKMAIK----DIVSWNSILSACTRAGDMEKAFALFQEMP----MKNTISWNTMLAGCL 220
+ KM D+V+ N +LSA KA + F+ M +T ++N ++
Sbjct: 103 VCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLS 162
Query: 221 QRGQFSEAVDLFDEM--KTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASS 278
+ GQ S+A+DLF+ M K C PD +T TS++ + G +E + + GL +
Sbjct: 163 KLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPN 222
Query: 279 PHVTTALMDMYAKCGSIEQALQIFFKAQ----VKDIYCWNAIISGLALHGHGYAALKLFG 334
ALM YA G AL + + + D+ + +++ A ++F
Sbjct: 223 IVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFL 282
Query: 335 YMKK 338
M+K
Sbjct: 283 MMRK 286
>AT3G04760.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:1303884-1305692 REVERSE
Length = 602
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 133/274 (48%), Gaps = 24/274 (8%)
Query: 85 IFVQTALINMYGTLHCTADACKMFENMPVKDL----VAWNSMLDAYASNGEMEDAISLFH 140
+F ALIN + ++ DA ++ + M KD V +N M+ + S G+++ A+ + +
Sbjct: 158 VFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLN 217
Query: 141 MMPLKD-----LSSFNILISGYSSCGEVLAARSIFDKMAIK----DIVSWNSILSACTRA 191
+ L D + ++ ILI G V A + D+M + D+ ++N+I+ +
Sbjct: 218 QL-LSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKE 276
Query: 192 GDMEKAFALFQEMPMK----NTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTA 247
G +++AF + + + +K + IS+N +L L +G++ E L +M + C P+ +T
Sbjct: 277 GMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTY 336
Query: 248 TSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQV 307
+ +++ G +E + + GL + L+ + + G ++ A++ F + +
Sbjct: 337 SILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIE-FLETMI 395
Query: 308 K-----DIYCWNAIISGLALHGHGYAALKLFGYM 336
DI +N +++ L +G AL++FG +
Sbjct: 396 SDGCLPDIVNYNTVLATLCKNGKADQALEIFGKL 429
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/351 (20%), Positives = 149/351 (42%), Gaps = 25/351 (7%)
Query: 3 LLVCNCFMPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGK 62
LL NC P+ V + +I+ ML G ++A+ M G + D +T+ +++ K
Sbjct: 219 LLSDNC-QPT--VITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCK 275
Query: 63 NCASRIGFA----FHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVA 118
F + + + + AL+N KMF ++V
Sbjct: 276 EGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 335
Query: 119 WNSMLDAYASNGEMEDAISLFHMMPLKDLS----SFNILISGYSSCGEVLAARSIFDKM- 173
++ ++ +G++E+A++L +M K L+ S++ LI+ + G + A + M
Sbjct: 336 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMI 395
Query: 174 ---AIKDIVSWNSILSACTRAGDMEKAFALFQEMP----MKNTISWNTMLAGCLQRGQFS 226
+ DIV++N++L+ + G ++A +F ++ N+ S+NTM + G
Sbjct: 396 SDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKI 455
Query: 227 EAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALM 286
A+ + EM + PD +T S++S G ++ ++ V S ++
Sbjct: 456 RALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVL 515
Query: 287 DMYAKCGSIEQALQIFFKAQV-----KDIYCWNAIISGLALHGHGYAALKL 332
+ K IE A+ + ++ V + + +I G+ G+ A++L
Sbjct: 516 LGFCKAHRIEDAINV-LESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMEL 565
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/177 (19%), Positives = 79/177 (44%), Gaps = 8/177 (4%)
Query: 168 SIFDKMAIKDIVSWNSILSACTRAGDMEKAFALFQEMPMKN----TISWNTMLAGCLQRG 223
I +K D+ ++N++++ + ++ A + M K+ T+++N M+ RG
Sbjct: 148 EILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRG 207
Query: 224 QFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTT 283
+ A+ + +++ + NC P +T T ++ A G ++ +K+ + GL
Sbjct: 208 KLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYN 267
Query: 284 ALMDMYAKCGSIEQALQIFFKAQVK----DIYCWNAIISGLALHGHGYAALKLFGYM 336
++ K G +++A ++ ++K D+ +N ++ L G KL M
Sbjct: 268 TIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKM 324
>AT5G59900.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:24123983-24126706 REVERSE
Length = 907
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 129/295 (43%), Gaps = 21/295 (7%)
Query: 33 QAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTIKTGFYRHIFVQTALI 92
+A L + M G R ++ T+ IL+ + +F G+ + TG ++ +LI
Sbjct: 385 EAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLI 444
Query: 93 NMYGTLHCTADACKMFENMPVKDL----VAWNSMLDAYASNGEMEDAISLFHMMPLKDLS 148
N + + A M K L V + S++ Y S G++ A+ L+H M K ++
Sbjct: 445 NGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIA 504
Query: 149 ----SFNILISGYSSCGEVLAARSIFDKMAIKDI----VSWNSILSACTRAGDMEKAFAL 200
+F L+SG G + A +F++MA ++ V++N ++ GDM KAF
Sbjct: 505 PSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEF 564
Query: 201 FQEMPMK----NTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAH 256
+EM K +T S+ ++ G GQ SEA D + NC + + T +L
Sbjct: 565 LKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCR 624
Query: 257 LGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIY 311
G LE + + + G+ L+D GS++ + F +K+++
Sbjct: 625 EGKLEEALSVCQEMVQRGVDLDLVCYGVLID-----GSLKHKDRKLFFGLLKEMH 674
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 124/304 (40%), Gaps = 55/304 (18%)
Query: 75 QTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDL----VAWNSMLDAYASNG 130
+ + G ++FV ALI+ +A +F+ M L V ++ ++D + G
Sbjct: 357 RVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRG 416
Query: 131 EMEDAISLFHMMPLKDLS----SFNILISGYSSCGEVLAARSIFDKMAIKD----IVSWN 182
+++ A+S M L +N LI+G+ G++ AA +M K +V++
Sbjct: 417 KLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYT 476
Query: 183 SILSACTRAGDMEKAFALFQEMPMK----NTISWNTMLAGCLQRGQFSEAVDLFDEMKTT 238
S++ G + KA L+ EM K + ++ T+L+G + G +AV LF+EM
Sbjct: 477 SLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEW 536
Query: 239 NCLPDYLTATSVLSACAHLGSL-----------ETGIKIHVYA--------IYSGLASSP 279
N P+ +T ++ G + E GI Y+ +G AS
Sbjct: 537 NVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEA 596
Query: 280 HV----------------TTALMDMYAKCGSIEQALQIFFKAQVK----DIYCWNAIISG 319
V T L+ + + G +E+AL + + + D+ C+ +I G
Sbjct: 597 KVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDG 656
Query: 320 LALH 323
H
Sbjct: 657 SLKH 660
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 103/231 (44%), Gaps = 20/231 (8%)
Query: 40 NMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTIKTGFYRHIFVQTALIN---MYG 96
M G + D+ + ++ A K + F I G + TA+IN G
Sbjct: 672 EMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAG 731
Query: 97 TLHCTADAC-KMFENMPVKDLVAWNSMLDAYASNGE--MEDAISLFHMMPLKDL----SS 149
++ C KM V + V + LD + GE M+ A+ L H LK L ++
Sbjct: 732 FVNEAEVLCSKMQPVSSVPNQVTYGCFLDIL-TKGEVDMQKAVEL-HNAILKGLLANTAT 789
Query: 150 FNILISGYSSCGEVLAARSIFDKM----AIKDIVSWNSILSACTRAGDMEKAFALFQEMP 205
+N+LI G+ G + A + +M D +++ ++++ R D++KA L+ M
Sbjct: 790 YNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMT 849
Query: 206 MK----NTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLS 252
K + +++NT++ GC G+ +A +L +EM +P+ T+ + S
Sbjct: 850 EKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSRTTTS 900
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/315 (20%), Positives = 124/315 (39%), Gaps = 55/315 (17%)
Query: 77 IKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVK----DLVAWNSMLDAYASNGEM 132
+ G +++ T +I L + A +M +M ++V +N ++D ++
Sbjct: 219 VSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKV 278
Query: 133 EDAISLFHMMPLKDLS----SFNILISGYSSCGEVLAARSIFDKMAI----KDIVSWNSI 184
+A+ + + KDL ++ L+ G E + D+M + +S+
Sbjct: 279 WEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSL 338
Query: 185 LSACTRAGDMEKAFALFQEMP----MKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNC 240
+ + G +E+A L + + N +N ++ + +F EA LFD M
Sbjct: 339 VEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGL 398
Query: 241 LPDYLTATSVL----------SACAHLGSL-ETGIKIHVYA------------------- 270
P+ +T + ++ +A + LG + +TG+K+ VY
Sbjct: 399 RPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEG 458
Query: 271 -----IYSGLASSPHVTTALMDMYAKCGSIEQALQIFF----KAQVKDIYCWNAIISGLA 321
I L + T+LM Y G I +AL+++ K IY + ++SGL
Sbjct: 459 FMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLF 518
Query: 322 LHGHGYAALKLFGYM 336
G A+KLF M
Sbjct: 519 RAGLIRDAVKLFNEM 533
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 95/205 (46%), Gaps = 22/205 (10%)
Query: 117 VAWNSMLDAYASNGEMEDAISLFHMMPLK----DLSSFNILISGYSSCGEVLAARSIF-- 170
+ + +L + G++E+A+S+ M + DL + +LI G + R +F
Sbjct: 613 ICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKD----RKLFFG 668
Query: 171 ------DKMAIKDIVSWNSILSACTRAGDMEKAFALFQ----EMPMKNTISWNTMLAGCL 220
D+ D V + S++ A ++ GD ++AF ++ E + N +++ ++ G
Sbjct: 669 LLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLC 728
Query: 221 QRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLG-SLETGIKIHVYAIYSGLASSP 279
+ G +EA L +M+ + +P+ +T L ++ +++H AI GL ++
Sbjct: 729 KAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELH-NAILKGLLANT 787
Query: 280 HVTTALMDMYAKCGSIEQALQIFFK 304
L+ + + G IE+A ++ +
Sbjct: 788 ATYNMLIRGFCRQGRIEEASELITR 812
>AT1G63130.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23412854-23414746 FORWARD
Length = 630
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 126/257 (49%), Gaps = 20/257 (7%)
Query: 102 ADACKMFENMPVK----DLVAWNSMLDAYASNGEMEDAISLFHMMPLK----DLSSFNIL 153
+DA ++ +M + ++V +++++DA+ G++ +A L+ M + D+ +++ L
Sbjct: 308 SDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 367
Query: 154 ISGYSSCGEVLAARSIFDKMAIKD----IVSWNSILSACTRAGDMEKAFALFQEMPMK-- 207
I+G+ + A+ +F+ M KD +V++N+++ +A +++ LF+EM +
Sbjct: 368 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGL 427
Query: 208 --NTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIK 265
NT+++ T++ G Q + A +F +M + LPD +T + +L + G +ET +
Sbjct: 428 VGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALV 487
Query: 266 IHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIF----FKAQVKDIYCWNAIISGLA 321
+ Y S + + +++ K G +E +F K ++ + ++SG
Sbjct: 488 VFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFC 547
Query: 322 LHGHGYAALKLFGYMKK 338
G A LF MK+
Sbjct: 548 RKGLKEEADALFREMKE 564
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 67/314 (21%), Positives = 132/314 (42%), Gaps = 51/314 (16%)
Query: 41 MQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTIKTGFYRHIFVQTALINMYGTLHC 100
MQ G + YT+ IL+ + + A + +K G+
Sbjct: 107 MQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYE------------------ 148
Query: 101 TADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMP----LKDLSSFNILISG 156
D+V NS+L+ + + DA+SL M D +FN LI G
Sbjct: 149 -------------PDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHG 195
Query: 157 YSSCGEVLAARSIFDKMAIK----DIVSWNSILSACTRAGDMEKAFALFQEMPM----KN 208
A ++ D+M +K D+V++ +++ + GD++ A +L ++M
Sbjct: 196 LFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPG 255
Query: 209 TISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHV 268
+ +NT++ ++A++LF EM P+ +T S++ + G ++
Sbjct: 256 VVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLS 315
Query: 269 YAIYSGLASSPHVTT--ALMDMYAKCGSIEQALQIF---FKAQVK-DIYCWNAIISGLAL 322
I + +P+V T AL+D + K G + +A +++ K + DI+ ++++I+G +
Sbjct: 316 DMIERKI--NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 373
Query: 323 HGHGYAALKLFGYM 336
H A +F M
Sbjct: 374 HDRLDEAKHMFELM 387
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 111/226 (49%), Gaps = 17/226 (7%)
Query: 52 TFPILLKAAGKNCASRIGFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENM 111
T+ L+K K G + + G + T LI+ + +A +F+ M
Sbjct: 398 TYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQM 457
Query: 112 P----VKDLVAWNSMLDAYASNGEMEDAISLFHMMPLK----DLSSFNILISGYSSCGEV 163
+ D++ ++ +LD +NG++E A+ +F + D+ ++NI+I G G+V
Sbjct: 458 VSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKV 517
Query: 164 LAARSIFDKMAIK----DIVSWNSILSACTRAGDMEKAFALFQEM----PMKNTISWNTM 215
+F +++K ++V++ +++S R G E+A ALF+EM P+ ++ ++NT+
Sbjct: 518 EDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTL 577
Query: 216 LAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLE 261
+ L+ G + + +L EM++ + D T +++ H G L+
Sbjct: 578 IRAHLRDGDKAASAELIREMRSCRFVGDAST-IGLVTNMLHDGRLD 622
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 108/255 (42%), Gaps = 55/255 (21%)
Query: 52 TFPILLKAAGKNCASRIGFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACK-MFEN 110
TF L+ A K + + IK IF ++LIN + +H D K MFE
Sbjct: 328 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF-CMHDRLDEAKHMFEL 386
Query: 111 MPVKD----LVAWNSMLDAYASNGEMEDAISLFHMMP----------------------- 143
M KD +V +N+++ + +++ + LF M
Sbjct: 387 MISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARE 446
Query: 144 ----------------LKDLSSFNILISGYSSCGEVLAARSIFD-----KMAIKDIVSWN 182
L D+ +++IL+ G + G+V A +F+ KM DI ++N
Sbjct: 447 CDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKME-PDIYTYN 505
Query: 183 SILSACTRAGDMEKAFALFQEMPMK----NTISWNTMLAGCLQRGQFSEAVDLFDEMKTT 238
++ +AG +E + LF + +K N +++ TM++G ++G EA LF EMK
Sbjct: 506 IMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEE 565
Query: 239 NCLPDYLTATSVLSA 253
LPD T +++ A
Sbjct: 566 GPLPDSGTYNTLIRA 580
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 111/254 (43%), Gaps = 20/254 (7%)
Query: 103 DACKMFENM----PVKDLVAWNSMLDAYASNGEMEDAISLFHMMP----LKDLSSFNILI 154
DA +F +M P +V ++ +L A A + + ISL M +L +++ILI
Sbjct: 64 DAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILI 123
Query: 155 SGYSSCGEVLAARSIFDKMAI----KDIVSWNSILSACTRAGDMEKAFALFQEMP----M 206
+ + ++ A ++ KM DIV+ NS+L+ + A +L +M
Sbjct: 124 NCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQ 183
Query: 207 KNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKI 266
++ ++NT++ G + + SEAV L D M C PD +T V++ G ++ + +
Sbjct: 184 PDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSL 243
Query: 267 HVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVK----DIYCWNAIISGLAL 322
+ + ++D ++ AL +F + K ++ +N++I L
Sbjct: 244 LKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCN 303
Query: 323 HGHGYAALKLFGYM 336
+G A +L M
Sbjct: 304 YGRWSDASRLLSDM 317
>AT1G74900.1 | Symbols: OTP43 | OTP43 (organelle transcript
processing defect 43) | chr1:28133933-28135381 FORWARD
Length = 453
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/321 (19%), Positives = 138/321 (42%), Gaps = 58/321 (18%)
Query: 21 IIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFH-GQTIKT 79
+ +++ G ++AV ++NM HG D +F +L K + R+ A+ + ++
Sbjct: 132 VAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCK--SKRVEKAYELFRALRG 189
Query: 80 GFYRHIFVQTALINMYGTLHCTADACKMFENMPVK----DLVAWNSMLDAYASNGEMEDA 135
F ++N + + T A ++ + M + +L +N+ML + G++ A
Sbjct: 190 RFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHA 249
Query: 136 ISLFHMMPLKD----LSSFNILISGYSSCGEVLAARSIFDKM----AIKDIVSWNSILSA 187
F M +D + ++ ++ G+ GE+ AR++FD+M + + ++N+++
Sbjct: 250 WEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQV 309
Query: 188 CTRAGDMEKAFALFQEMPMK----NTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPD 243
+ ++E A +F+EM + N ++N ++ G G+FS +L M+ C P+
Sbjct: 310 LCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPN 369
Query: 244 YLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFF 303
+ T ++ Y++C +E+AL +F
Sbjct: 370 FQT-----------------------------------YNMMIRYYSECSEVEKALGLFE 394
Query: 304 KAQVKD----IYCWNAIISGL 320
K D + +N +ISG+
Sbjct: 395 KMGSGDCLPNLDTYNILISGM 415
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/234 (18%), Positives = 100/234 (42%), Gaps = 16/234 (6%)
Query: 12 SLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFA 71
S++ +N I+ L+ +A+ M G + T+ +LK + R +
Sbjct: 192 SVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWE 251
Query: 72 FHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENM----PVKDLVAWNSMLDAYA 127
F + K + T +++ +G A +F+ M + + +N+M+
Sbjct: 252 FFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLC 311
Query: 128 SNGEMEDAISLFHMMPLK----DLSSFNILISGYSSCGEVLAARSIFDKMAIK----DIV 179
+E+A+ +F M + +++++N+LI G GE + +M + +
Sbjct: 312 KKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQ 371
Query: 180 SWNSILSACTRAGDMEKAFALFQEMP----MKNTISWNTMLAGCLQRGQFSEAV 229
++N ++ + ++EKA LF++M + N ++N +++G R + + V
Sbjct: 372 TYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSEDMV 425
>AT2G15630.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:6814521-6816404 FORWARD
Length = 627
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 124/258 (48%), Gaps = 16/258 (6%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTI 77
+N +I + E A + ++ G D+ T+ IL+ ++ ++ FA H + +
Sbjct: 365 YNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMM 424
Query: 78 KTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVK----DLVAWNSMLDAYASNGEME 133
G F T+LI + + T +A ++FE + K DLV N+++D + + G M+
Sbjct: 425 TDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMD 484
Query: 134 DAISLFHMMPL----KDLSSFNILISGYSSCGEVLAARSIFDKMAIKDI----VSWNSIL 185
A SL M + D ++N L+ G G+ AR + +M + I +S+N+++
Sbjct: 485 RAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLI 544
Query: 186 SACTRAGDMEKAFALFQEMPM----KNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCL 241
S ++ GD + AF + EM +++N +L G + + A +L EMK+ +
Sbjct: 545 SGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIV 604
Query: 242 PDYLTATSVLSACAHLGS 259
P+ + SV+ A ++L +
Sbjct: 605 PNDSSFCSVIEAMSNLDA 622
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 111/245 (45%), Gaps = 16/245 (6%)
Query: 30 NAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTIKTGFYRHIFVQT 89
N +A M+ G D+ ++ IL++ N + FA+ + +K G +
Sbjct: 307 NEGRASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYN 366
Query: 90 ALIN---MYGTLHCTADACK-MFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMPLK 145
LI+ M + + + E V D V +N +++ Y +G+ + A +L M
Sbjct: 367 TLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTD 426
Query: 146 DLS----SFNILISGYSSCGEVLAARSIFDKMAIK----DIVSWNSILSACTRAGDMEKA 197
+ ++ LI + A +F+K+ K D+V N+++ G+M++A
Sbjct: 427 GIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRA 486
Query: 198 FALFQEMPM----KNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSA 253
F+L +EM M + +++N ++ G G+F EA +L EMK PD+++ +++S
Sbjct: 487 FSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISG 546
Query: 254 CAHLG 258
+ G
Sbjct: 547 YSKKG 551
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/347 (21%), Positives = 140/347 (40%), Gaps = 19/347 (5%)
Query: 9 FMPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRI 68
F P E N I+ + E A + Y +M +++ YTF I++ K +
Sbjct: 186 FYPKTET--CNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKK 243
Query: 69 GFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVK----DLVAWNSMLD 124
F G G I L+ + A + M K D+ +N +L
Sbjct: 244 AKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILS 303
Query: 125 AYASNGEMEDAISLFHMMPL-KDLSSFNILISGYSSCGEVLAARSIFDKMAIKDIV---- 179
+ G + + + L D S+NILI G S+ G++ A + D+M + +V
Sbjct: 304 WMCNEGRASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFY 363
Query: 180 SWNSILSACTRAGDMEKAFALFQEMPMK----NTISWNTMLAGCLQRGQFSEAVDLFDEM 235
++N+++ +E A L +E+ K +++++N ++ G Q G +A L DEM
Sbjct: 364 TYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEM 423
Query: 236 KTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSI 295
T P T TS++ ++ + G+ + LMD + G++
Sbjct: 424 MTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNM 483
Query: 296 EQALQIFFKAQV----KDIYCWNAIISGLALHGHGYAALKLFGYMKK 338
++A + + + D +N ++ GL G A +L G MK+
Sbjct: 484 DRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKR 530
>AT5G64320.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:25723247-25725439 REVERSE
Length = 730
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 122/255 (47%), Gaps = 18/255 (7%)
Query: 102 ADACK-MFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMP-----LKDLSSFNILIS 155
DA K +F +P ++V +N+++ + ++G ++DA ++ M + D+ ++N LI
Sbjct: 338 VDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIY 397
Query: 156 GYSSCGEVLAARSIFDKMAIK----DIVSWNSILSACTRAGDMEKAFALFQEMPMK---- 207
GY G V A + M K ++ S+ ++ + G +++A+ + EM
Sbjct: 398 GYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKP 457
Query: 208 NTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIH 267
NT+ +N +++ + + EAV++F EM C PD T S++S + ++ + +
Sbjct: 458 NTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLL 517
Query: 268 VYAIYSGLASSPHVTTALMDMYAKCGSIEQAL----QIFFKAQVKDIYCWNAIISGLALH 323
I G+ ++ L++ + + G I++A ++ F+ D +N++I GL
Sbjct: 518 RDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRA 577
Query: 324 GHGYAALKLFGYMKK 338
G A LF M +
Sbjct: 578 GEVDKARSLFEKMLR 592
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 132/301 (43%), Gaps = 16/301 (5%)
Query: 14 EVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFH 73
+V +N +I + G A+ +M+ G + + Y++ IL+ K +
Sbjct: 388 DVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVL 447
Query: 74 GQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVK----DLVAWNSMLDAYASN 129
+ G + LI+ + H +A ++F MP K D+ +NS++
Sbjct: 448 NEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEV 507
Query: 130 GEMEDAISLFHMM----PLKDLSSFNILISGYSSCGEVLAARSIFDKMAIK----DIVSW 181
E++ A+ L M + + ++N LI+ + GE+ AR + ++M + D +++
Sbjct: 508 DEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITY 567
Query: 182 NSILSACTRAGDMEKAFALFQEMPMK----NTISWNTMLAGCLQRGQFSEAVDLFDEMKT 237
NS++ RAG+++KA +LF++M + IS N ++ G + G EAV+ EM
Sbjct: 568 NSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVL 627
Query: 238 TNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQ 297
PD +T S+++ G +E G+ + G+ LM K G +
Sbjct: 628 RGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYD 687
Query: 298 A 298
A
Sbjct: 688 A 688
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/353 (22%), Positives = 146/353 (41%), Gaps = 68/353 (19%)
Query: 41 MQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTIKTGFYR----HIFVQTALINMYG 96
M + GF D+ T+ L+ N +IG K FYR I + LI+ +
Sbjct: 313 MLIRGFAPDDITYGYLM-----NGLCKIGRV---DAAKDLFYRIPKPEIVIFNTLIHGFV 364
Query: 97 TLHCTADACKMFENMP-----VKDLVAWNSMLDAYASNGEMEDAISLFHMMPLK----DL 147
T DA + +M V D+ +NS++ Y G + A+ + H M K ++
Sbjct: 365 THGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNV 424
Query: 148 SSFNILISGYSSCGEVLAARSIFDKMAIK----DIVSWNSILSACTRAGDMEKAFALFQE 203
S+ IL+ G+ G++ A ++ ++M+ + V +N ++SA + + +A +F+E
Sbjct: 425 YSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFRE 484
Query: 204 MPMK---------------------------------------NTISWNTMLAGCLQRGQ 224
MP K NT+++NT++ L+RG+
Sbjct: 485 MPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGE 544
Query: 225 FSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTA 284
EA L +EM D +T S++ G ++ + + G A S
Sbjct: 545 IKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNI 604
Query: 285 LMDMYAKCGSIEQAL----QIFFKAQVKDIYCWNAIISGLALHGHGYAALKLF 333
L++ + G +E+A+ ++ + DI +N++I+GL G L +F
Sbjct: 605 LINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMF 657
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 110/239 (46%), Gaps = 20/239 (8%)
Query: 33 QAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTIKTGFYRHIFVQTALI 92
+AV + M G + D YTF L+ + + I G + LI
Sbjct: 477 EAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLI 536
Query: 93 NMYGTLHCTADACKM-----FENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMPLKDL 147
N + +A K+ F+ P+ D + +NS++ GE++ A SLF M L+D
Sbjct: 537 NAFLRRGEIKEARKLVNEMVFQGSPL-DEITYNSLIKGLCRAGEVDKARSLFEKM-LRDG 594
Query: 148 S-----SFNILISGYSSCGEVLAARSIFDKMAIK----DIVSWNSILSACTRAGDMEKAF 198
S NILI+G G V A +M ++ DIV++NS+++ RAG +E
Sbjct: 595 HAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGL 654
Query: 199 ALFQEMPMK----NTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSA 253
+F+++ + +T+++NT+++ + G +A L DE +P++ T + +L +
Sbjct: 655 TMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQS 713
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 83/183 (45%), Gaps = 10/183 (5%)
Query: 150 FNILISGYSSCGEVLAARSIFDKMAIK---DIVSWNSILSACTRAGDMEKAFALFQEMP- 205
IL+SG +C +V AA +D ++ K + ++ ++ A +++ A +L ++M
Sbjct: 189 LEILVSG--NCHKV-AANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTK 245
Query: 206 ---MKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLET 262
+ N++ + T++ + + +EA+ L +EM C+PD T V+ +
Sbjct: 246 HGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINE 305
Query: 263 GIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLAL 322
K+ + G A LM+ K G ++ A +F++ +I +N +I G
Sbjct: 306 AAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVT 365
Query: 323 HGH 325
HG
Sbjct: 366 HGR 368
>AT1G06580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:2014440-2015942 REVERSE
Length = 500
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 115/238 (48%), Gaps = 20/238 (8%)
Query: 105 CKMFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMPL----KDLSSFNILISGYSSC 160
C M E+ P+ +V ++ +L A A + E ISLF + + DL SF LI + C
Sbjct: 68 CDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRC 127
Query: 161 GEVLAARSIFDKMAI----KDIVSWNSILSACTRAGDMEKAFALFQEMP----MKNTISW 212
+ A S KM IV++ S+++ +A +L ++ N + +
Sbjct: 128 ARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIY 187
Query: 213 NTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIY 272
NT++ ++GQ + A+D+ MK PD +T S+++ H G+ G+ + +
Sbjct: 188 NTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTW--GVSARILSDM 245
Query: 273 SGLASSPHVTT--ALMDMYAKCGSI----EQALQIFFKAQVKDIYCWNAIISGLALHG 324
+ SP V T AL+D+Y K G + +Q ++ ++ +I +N++I+GL +HG
Sbjct: 246 MRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHG 303
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/331 (20%), Positives = 149/331 (45%), Gaps = 34/331 (10%)
Query: 30 NAEQAVLT-YVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTIKTGFYRHIFVQ 88
N +AV++ + ++++ G D Y+F L+ + + + G+ +K GF I
Sbjct: 93 NKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTF 152
Query: 89 TALINMYGTLHCTADACKMFENMPVKD----------LVAWNSMLDAYASNGEMEDAISL 138
+L+N G H + +E M + D +V +N+++D+ G++ A+ +
Sbjct: 153 GSLVN--GFCHVN----RFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDV 206
Query: 139 F-HMMPL---KDLSSFNILISGYSSCGE-VLAARSIFDKMAI---KDIVSWNSILSACTR 190
HM + D+ ++N LI+ G ++AR + D M + D++++++++ +
Sbjct: 207 LKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGK 266
Query: 191 AGDMEKAFALFQEMPMK----NTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLT 246
G + +A + EM + N +++N+++ G G EA + + + + P+ +T
Sbjct: 267 EGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVT 326
Query: 247 ATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFK-- 304
++++ ++ G+KI G+ L Y + G A ++ +
Sbjct: 327 YNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMV 386
Query: 305 --AQVKDIYCWNAIISGLALHGH-GYAALKL 332
D+Y +N ++ GL HG G A ++L
Sbjct: 387 SCGVHPDMYTFNILLDGLCDHGKIGKALVRL 417
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE
Length = 590
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/329 (21%), Positives = 134/329 (40%), Gaps = 21/329 (6%)
Query: 31 AEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTIKTGFYRHIFVQTA 90
A +AV M V G + D T+ ++ K + + K + +
Sbjct: 196 ASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNT 255
Query: 91 LINMYGTLHCTADACKMFENMPVK----DLVAWNSMLDAYASNGEMEDAISLFHMMPLK- 145
+I+ DA +F M K D+ +N ++ + G DA L M K
Sbjct: 256 IIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKN 315
Query: 146 ---DLSSFNILISGYSSCGEVLAARSIFDKMA-----IKDIVSWNSILSACTRAGDMEKA 197
DL FN LI + G+++ A ++D+M D+V++N+++ + +E+
Sbjct: 316 INPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEG 375
Query: 198 FALFQEMPMK----NTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSA 253
+F+EM + NT+++ T++ G Q A +F +M + PD +T +L
Sbjct: 376 MEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDG 435
Query: 254 CAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIF----FKAQVKD 309
+ G++ET + + Y + T +++ K G +E +F K +
Sbjct: 436 LCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPN 495
Query: 310 IYCWNAIISGLALHGHGYAALKLFGYMKK 338
+ + ++SG G A LF MK+
Sbjct: 496 VVTYTTMMSGFCRKGLKEEADALFVEMKE 524
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 113/254 (44%), Gaps = 20/254 (7%)
Query: 103 DACKMFENM----PVKDLVAWNSMLDAYASNGEMEDAISLFHMMP----LKDLSSFNILI 154
DA +F +M P +V ++ +L A A + + ISL M +L +++I I
Sbjct: 58 DAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFI 117
Query: 155 SGYSSCGEVLAARSIFDKMAI----KDIVSWNSILSACTRAGDMEKAFALFQEMP----M 206
+ + ++ A +I KM IV+ NS+L+ + +A AL +M
Sbjct: 118 NYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQ 177
Query: 207 KNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKI 266
+T+++ T++ G Q + SEAV L + M C PD +T +V++ G + + +
Sbjct: 178 PDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNL 237
Query: 267 HVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVK----DIYCWNAIISGLAL 322
+ + + ++D K ++ A +F K + K D++ +N +IS L
Sbjct: 238 LNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCN 297
Query: 323 HGHGYAALKLFGYM 336
+G A +L M
Sbjct: 298 YGRWSDASRLLSDM 311
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 74/135 (54%), Gaps = 12/135 (8%)
Query: 115 DLVAWNSMLDAYASNGEMEDAISLFHMMPLKDLS----SFNILISGYSSCGEVLAARSIF 170
D++ +N +LD +NG +E A+ +F M +D+ ++ +I G+V +F
Sbjct: 425 DIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLF 484
Query: 171 DKMAIK----DIVSWNSILSACTRAGDMEKAFALFQEM----PMKNTISWNTMLAGCLQR 222
+++K ++V++ +++S R G E+A ALF EM P+ N+ ++NT++ L+
Sbjct: 485 CSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRD 544
Query: 223 GQFSEAVDLFDEMKT 237
G + + +L EM++
Sbjct: 545 GDEAASAELIKEMRS 559
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 80/153 (52%), Gaps = 12/153 (7%)
Query: 113 VKDLVAWNSMLDAYASNGEMEDAISLFHMMPLK----DLSSFNILISGYSSCGEVLAARS 168
V + V + +++ + + ++A +F M D+ ++NIL+ G + G V A
Sbjct: 388 VGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALV 447
Query: 169 IFDKMAIKD----IVSWNSILSACTRAGDMEKAFALFQEMPMK----NTISWNTMLAGCL 220
+F+ M +D IV++ +++ A +AG +E + LF + +K N +++ TM++G
Sbjct: 448 VFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFC 507
Query: 221 QRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSA 253
++G EA LF EMK LP+ T +++ A
Sbjct: 508 RKGLKEEADALFVEMKEDGPLPNSGTYNTLIRA 540
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD
Length = 952
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 127/298 (42%), Gaps = 45/298 (15%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTF-PILLKAAGKNCASRIGFAFHGQT 76
+N II +GN ++A+ T MQ R TF PI+ HG
Sbjct: 557 YNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPII----------------HGYA 600
Query: 77 IKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSMLDAYASNGEMEDAI 136
K+G R + +M C V + +N +++ +ME A+
Sbjct: 601 -KSGDMRRSL---EVFDMMRRCGC------------VPTVHTFNGLINGLVEKRQMEKAV 644
Query: 137 SLFHMMPLKDLS----SFNILISGYSSCGEVLAARSIFDKMAIK----DIVSWNSILSAC 188
+ M L +S ++ ++ GY+S G+ A F ++ + DI ++ ++L AC
Sbjct: 645 EILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKAC 704
Query: 189 TRAGDMEKAFALFQEMPMKN----TISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDY 244
++G M+ A A+ +EM +N + +N ++ G +RG EA DL +MK PD
Sbjct: 705 CKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDI 764
Query: 245 LTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIF 302
T TS +SAC+ G + + G+ + T L+ +A+ E+AL +
Sbjct: 765 HTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCY 822
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/237 (20%), Positives = 115/237 (48%), Gaps = 16/237 (6%)
Query: 116 LVAWNSMLDAYASNGEMEDAISLFHMMPLK----DLSSFNILISGYSSCGEVLAARSIFD 171
+V + +++ Y G++ A+ + +M + +L +++++I+G+ + A ++F+
Sbjct: 484 VVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFE 543
Query: 172 KMAIK----DIVSWNSILSACTRAGDMEKAFALFQEMP----MKNTISWNTMLAGCLQRG 223
M + D++ +N+I+SA G+M++A +EM T ++ ++ G + G
Sbjct: 544 DMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSG 603
Query: 224 QFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTT 283
++++FD M+ C+P T +++ +E ++I +G++++ H T
Sbjct: 604 DMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYT 663
Query: 284 ALMDMYAKCGSIEQALQIFFKAQVK----DIYCWNAIISGLALHGHGYAALKLFGYM 336
+M YA G +A + F + Q + DI+ + A++ G +AL + M
Sbjct: 664 KIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEM 720
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 110/241 (45%), Gaps = 26/241 (10%)
Query: 89 TALINMYGTLHCTADACKMFENMPVK----DLVAWNSMLDAYASNGEMEDAISLFHMMPL 144
T ++ Y ++ T A + F + + D+ + ++L A +G M+ A+++ M
Sbjct: 663 TKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSA 722
Query: 145 KDLSS----FNILISGYSSCGEVLAARSIFDKMAIK----DIVSWNSILSACTRAGDMEK 196
+++ +NILI G++ G+V A + +M + DI ++ S +SAC++AGDM +
Sbjct: 723 RNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNR 782
Query: 197 AFALFQEMP----MKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPD--------- 243
A +EM N ++ T++ G + +A+ ++EMK PD
Sbjct: 783 ATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLT 842
Query: 244 -YLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIF 302
L+ S+ A + G + ++ + + ++ H + L + A G + + LQ
Sbjct: 843 SLLSRASIAEAYIYSGVMTICKEMVEAGLIVDMGTAVHWSKCLCKIEASGGELTETLQKT 902
Query: 303 F 303
F
Sbjct: 903 F 903
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/268 (20%), Positives = 117/268 (43%), Gaps = 20/268 (7%)
Query: 91 LINMYGTLHCTADACKMFENMPVKDLVA----WNSMLDAYASNGEMEDAISLFHMMPLK- 145
++ YG A + FE M + + + S++ AYA +M++A+S M +
Sbjct: 315 MVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEG 374
Query: 146 ---DLSSFNILISGYSSCGEVLAARSIFDKMA-IKDIVS---WNSILSACTRAGDMEKAF 198
L ++++++ G+S G AA FD+ I ++ + I+ A + +ME+A
Sbjct: 375 IEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAE 434
Query: 199 ALFQEMPMKNTIS----WNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSAC 254
AL +EM + + ++TM+ G + + +F +K P +T +++
Sbjct: 435 ALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLY 494
Query: 255 AHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIF---FKAQVK-DI 310
+G + +++ G+ + + +++ + K A +F K +K D+
Sbjct: 495 TKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDV 554
Query: 311 YCWNAIISGLALHGHGYAALKLFGYMKK 338
+N IIS G+ A++ M+K
Sbjct: 555 ILYNNIISAFCGMGNMDRAIQTVKEMQK 582
>AT1G63330.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23489628-23491519 FORWARD
Length = 558
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/336 (22%), Positives = 143/336 (42%), Gaps = 20/336 (5%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTI 77
+ +I L A +AV M G + + T+ +++ K + F +
Sbjct: 117 FTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKME 176
Query: 78 KTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVK----DLVAWNSMLDAYASNGEME 133
+ + +I+ DA +F+ M K ++V ++S++ S G
Sbjct: 177 AAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWS 236
Query: 134 DAISLFHMMPLK----DLSSFNILISGYSSCGEVLAARSIFDKMAIK----DIVSWNSIL 185
DA L M K +L +FN LI + G+ + A + D M + DI ++NS++
Sbjct: 237 DASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLI 296
Query: 186 SACTRAGDMEKAFALFQEMPMKNTI----SWNTMLAGCLQRGQFSEAVDLFDEMKTTNCL 241
+ ++KA +F+ M K+ ++NT++ G + + + +LF EM +
Sbjct: 297 NGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLV 356
Query: 242 PDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQI 301
D +T T+++ H G + K+ + G+ + L+D G +E+AL++
Sbjct: 357 GDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEV 416
Query: 302 FF---KAQVK-DIYCWNAIISGLALHGHGYAALKLF 333
F K+++K DIY + +I G+ G LF
Sbjct: 417 FDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLF 452
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/327 (22%), Positives = 141/327 (43%), Gaps = 22/327 (6%)
Query: 33 QAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTIKTGFYRHIFVQTALI 92
AV M G+R D TF L+ + + A + ++ G ++ ++
Sbjct: 97 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 156
Query: 93 N---MYGTLHCTADACKMFENMPVK-DLVAWNSMLDAYASNGEMEDAISLFHMMPLK--- 145
N G + + E ++ D+V +N+++D+ ++DA++LF M K
Sbjct: 157 NGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIR 216
Query: 146 -DLSSFNILISGYSSCGEVLAARSIFDKMAIKDI----VSWNSILSACTRAGDMEKAFAL 200
++ +++ LIS S G A + M K I V++N+++ A + G +A L
Sbjct: 217 PNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKL 276
Query: 201 FQEMPMK----NTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAH 256
+M + + ++N+++ G + +A +F+ M + +C PD T +++
Sbjct: 277 HDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCK 336
Query: 257 LGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKD-----IY 311
+E G ++ + GL T L+ G + A Q FK V D I
Sbjct: 337 SKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNA-QKVFKQMVSDGVPPDIM 395
Query: 312 CWNAIISGLALHGHGYAALKLFGYMKK 338
++ ++ GL +G AL++F YM+K
Sbjct: 396 TYSILLDGLCNNGKLEKALEVFDYMQK 422
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/289 (19%), Positives = 129/289 (44%), Gaps = 20/289 (6%)
Query: 68 IGFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMP----VKDLVAWNSML 123
I A G+ +K G+ I ++L+N Y +DA + + M D + + +++
Sbjct: 62 ISLALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLI 121
Query: 124 DAYASNGEMEDAISLFHMMPLK----DLSSFNILISGYSSCGEVLAARSIFDKMAI---- 175
+ + +A++L M + +L ++ ++++G G++ A ++ +KM
Sbjct: 122 HGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIE 181
Query: 176 KDIVSWNSILSACTRAGDMEKAFALFQEMPMK----NTISWNTMLAGCLQRGQFSEAVDL 231
D+V +N+I+ + + ++ A LF+EM K N ++++++++ G++S+A L
Sbjct: 182 ADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQL 241
Query: 232 FDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAK 291
+M P+ +T +++ A G K+H I + +L++ +
Sbjct: 242 LSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCM 301
Query: 292 CGSIEQALQIF----FKAQVKDIYCWNAIISGLALHGHGYAALKLFGYM 336
+++A Q+F K D+ +N +I G +LF M
Sbjct: 302 HDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREM 350
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 103/254 (40%), Gaps = 53/254 (20%)
Query: 52 TFPILLKAAGKNCASRIGFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACK-MFEN 110
TF L+ A K H IK IF +LIN + +H D K MFE
Sbjct: 256 TFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGF-CMHDRLDKAKQMFEF 314
Query: 111 MPVKD----LVAWNSMLDAYASNGEMEDAISLFHMMPLK--------------------- 145
M KD L +N+++ + + +ED LF M +
Sbjct: 315 MVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGD 374
Query: 146 ------------------DLSSFNILISGYSSCGEVLAARSIFD---KMAIK-DIVSWNS 183
D+ +++IL+ G + G++ A +FD K IK DI + +
Sbjct: 375 CDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTT 434
Query: 184 ILSACTRAGDMEKAFALFQEMPMK----NTISWNTMLAGCLQRGQFSEAVDLFDEMKTTN 239
++ +AG ++ + LF + +K N +++NTM++G + EA L +MK
Sbjct: 435 MIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDG 494
Query: 240 CLPDYLTATSVLSA 253
LPD T +++ A
Sbjct: 495 PLPDSGTYNTLIRA 508
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 108/229 (47%), Gaps = 23/229 (10%)
Query: 52 TFPILLKAAGKNCASRIGFAFHGQTIKTGFYRHIFVQTALINMYGTLH---CTADACKMF 108
T+ L+K K+ G + G T LI G H C +A K+F
Sbjct: 326 TYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQ--GLFHDGDCD-NAQKVF 382
Query: 109 ENMPVK----DLVAWNSMLDAYASNGEMEDAISLFHMMPLK----DLSSFNILISGYSSC 160
+ M D++ ++ +LD +NG++E A+ +F M D+ + +I G
Sbjct: 383 KQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKA 442
Query: 161 GEVLAARSIFDKMAIK----DIVSWNSILSACTRAGDMEKAFALFQEM----PMKNTISW 212
G+V +F +++K ++V++N+++S +++A+AL ++M P+ ++ ++
Sbjct: 443 GKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTY 502
Query: 213 NTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLE 261
NT++ L+ G + + +L EM++ + D T +++ H G L+
Sbjct: 503 NTLIRAHLRDGDKAASAELIREMRSCRFVGDAST-IGLVANMLHDGRLD 550
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 104/230 (45%), Gaps = 18/230 (7%)
Query: 125 AYASNGEMEDAISLFHMM----PLKDLSSFNILISGYSSCG--EVLAARSIFDKMAI--- 175
++ + +++DAI LF M PL + FN L+S + +++ + ++ KM
Sbjct: 16 SWGKDLKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGY 75
Query: 176 -KDIVSWNSILSACTRAGDMEKAFALFQEMP----MKNTISWNTMLAGCLQRGQFSEAVD 230
IV+ +S+L+ + A AL +M +TI++ T++ G + SEAV
Sbjct: 76 EPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVA 135
Query: 231 LFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYA 290
L D M C P+ +T V++ G ++ + + + + + ++D
Sbjct: 136 LVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLC 195
Query: 291 KCGSIEQALQIFFKAQVK----DIYCWNAIISGLALHGHGYAALKLFGYM 336
K ++ AL +F + + K ++ ++++IS L +G A +L M
Sbjct: 196 KYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM 245
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD
Length = 816
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 85/354 (24%), Positives = 143/354 (40%), Gaps = 53/354 (14%)
Query: 31 AEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTIKTGFYRHIFVQTA 90
AE A+ Y G + + YT ILL A K G+ + G + +
Sbjct: 335 AEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNT 394
Query: 91 LINMY---GTLHCTADACKMFENMPVK-DLVAWNSMLDAYASNGEMEDAISLFHMMPLKD 146
+I+ Y G L + E +K D +A+N ++ + GEME+A + M LK
Sbjct: 395 MIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKG 454
Query: 147 LS----SFNILISGY------SSCGEVL-------------------------------- 164
+S ++NILI GY C ++L
Sbjct: 455 VSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQ 514
Query: 165 -AARSIFDKMAIKDIVSWNSILSACTRAGDMEKAFALFQEMPMK----NTISWNTMLAGC 219
R + D+ + +N ++ C G +E AF +EM K N +++NT++ G
Sbjct: 515 IVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGL 574
Query: 220 LQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSP 279
G+ SEA DL E+ PD T S++S G+++ I ++ SG+ +
Sbjct: 575 SMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTL 634
Query: 280 HVTTALMDMYAKCGSIEQALQIFFKAQVK-DIYCWNAIISGLALHGHGYAALKL 332
L+ + K G IE ++F + +K D+ +N ++ A+HG A L
Sbjct: 635 KTYHLLISLCTKEG-IELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNL 687
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 75/342 (21%), Positives = 141/342 (41%), Gaps = 22/342 (6%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTI 77
+N ++K G E A M+ GF D +TF IL N + + +
Sbjct: 287 FNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAV 346
Query: 78 KTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVA----WNSMLDAYASNGEME 133
+G + + + L+N A ++ K LV +N+M+D Y G++
Sbjct: 347 DSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLV 406
Query: 134 DAISLFHMMPLK----DLSSFNILISGYSSCGEVLAARSIFDKMAIK----DIVSWNSIL 185
A M + D ++N LI + GE+ A +KM +K + ++N ++
Sbjct: 407 GARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILI 466
Query: 186 SACTRAGDMEKAFALFQEMP----MKNTISWNTMLAGCLQRG-QFSEAVDLFDEMKTTNC 240
R + +K F + +EM M N +S+ T++ CL +G + EA + +M+
Sbjct: 467 GGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLI-NCLCKGSKLLEAQIVKRDMEDRGV 525
Query: 241 LPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQA-- 298
P ++ C G +E + + G+ + L+D + G + +A
Sbjct: 526 SPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAED 585
Query: 299 --LQIFFKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMKK 338
L+I K D++ +N++ISG G+ + L+ MK+
Sbjct: 586 LLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKR 627
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 90/187 (48%), Gaps = 12/187 (6%)
Query: 150 FNILISGYSSCGEVLAARSIFDKMAIK----DIVSWNSILSACTRAGDMEKAFALFQEMP 205
+N+LI G + A +FD+M + ++++N+++ +AG+ EK+F + + M
Sbjct: 217 YNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMK 276
Query: 206 MKNT----ISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLE 261
+ I++NT+L G + G +A ++ EMK +PD T + + + E
Sbjct: 277 ADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAE 336
Query: 262 TGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDI----YCWNAII 317
+ ++ A+ SG+ + + + L++ K G IE+A +I + K + +N +I
Sbjct: 337 AALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMI 396
Query: 318 SGLALHG 324
G G
Sbjct: 397 DGYCRKG 403
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 101/224 (45%), Gaps = 14/224 (6%)
Query: 33 QAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTIKTGFYRHIFVQTALI 92
+A + +M+ G + +L+ F F + +K G ++ LI
Sbjct: 512 EAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLI 571
Query: 93 N---MYGTLHCTADACKMFENMPVK-DLVAWNSMLDAYASNGEMEDAISLFHMMPLK--- 145
+ M G L D +K D+ +NS++ Y G ++ I+L+ M
Sbjct: 572 DGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIK 631
Query: 146 -DLSSFNILISGYSSCGEVLAARSIFDKMAIK-DIVSWNSILSACTRAGDMEKAFALFQE 203
L ++++LIS + G L R +F +M++K D++ +N +L GDMEKAF L ++
Sbjct: 632 PTLKTYHLLISLCTKEGIELTER-LFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQ 690
Query: 204 MPMK----NTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPD 243
M K + ++N+++ G L+ G+ E L DEM P+
Sbjct: 691 MIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPE 734
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/317 (20%), Positives = 122/317 (38%), Gaps = 53/317 (16%)
Query: 38 YVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTIKTGFYRHIFVQTALINMYGT 97
++N+ FR + + ++AA K G + Y +F+ LI+
Sbjct: 167 FLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCK 226
Query: 98 LHCTADACKMFENMPVK----DLVAWNSMLDAYASNGEMEDAISLF------HMMP---- 143
DA ++F+ M + L+ +N+++D Y G E + + H+ P
Sbjct: 227 GKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLIT 286
Query: 144 -----------------------LKDLS------SFNILISGYSSCGEVLAARSIFDKMA 174
+KDL +F+IL GYSS + AA +++ A
Sbjct: 287 FNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYE-TA 345
Query: 175 IKDIVSWNS-----ILSACTRAGDMEKAFALF-QEMP---MKNTISWNTMLAGCLQRGQF 225
+ V N+ +L+A + G +EKA + +EM + N + +NTM+ G ++G
Sbjct: 346 VDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDL 405
Query: 226 SEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTAL 285
A + M+ PD+L ++ LG +E K G++ S L
Sbjct: 406 VGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNIL 465
Query: 286 MDMYAKCGSIEQALQIF 302
+ Y + ++ I
Sbjct: 466 IGGYGRKYEFDKCFDIL 482
>AT1G79080.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:29747102-29748832 REVERSE
Length = 576
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 79/367 (21%), Positives = 161/367 (43%), Gaps = 38/367 (10%)
Query: 1 MPLLVCNCFMPSLEVRRW--NEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLK 58
+ L+V + +P + N++ K+ GN A+ M+ HG+ ++ T+ L++
Sbjct: 129 IELMVSSGIIPDASAYTYLVNQLCKR----GNVGYAMQLVEKMEDHGYPSNTVTYNALVR 184
Query: 59 AAGKNCASRIGFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVK---- 114
+ F + ++ G + F + L+ T +A K+ + + VK
Sbjct: 185 GLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEP 244
Query: 115 DLVAWNSMLDAYASNGEMEDAISLFHMMPLK----DLSSFNILISGYSSCGEVLAARSIF 170
+LV++N +L + G +DA++LF +P K ++ S+NIL+ G A S+
Sbjct: 245 NLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLL 304
Query: 171 DKMAIKD----IVSWNSILSACTRAGDMEKAFALFQEMPMKN------TISWNTMLAGCL 220
+M D +V++N ++++ G E+A + +EM N S+N ++A
Sbjct: 305 AEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLC 364
Query: 221 QRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPH 280
+ G+ V DEM C P+ T ++ S C H ++ + I L++
Sbjct: 365 KEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQ-----EAFYIIQSLSNKQK 419
Query: 281 VTT-----ALMDMYAKCGSIEQALQIFFKAQV----KDIYCWNAIISGLALHGHGYAALK 331
T +++ + G+ A Q+ ++ D + ++A+I GL L G A++
Sbjct: 420 CCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAME 479
Query: 332 LFGYMKK 338
+ M++
Sbjct: 480 VLSIMEE 486
>AT4G31850.1 | Symbols: PGR3 | PGR3 (PROTON GRADIENT REGULATION 3) |
chr4:15403020-15406358 FORWARD
Length = 1112
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 139/330 (42%), Gaps = 55/330 (16%)
Query: 29 GNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTIKTGFYRHIFVQ 88
GN +A T M+ G + +T+ L+ + G G +
Sbjct: 377 GNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTY 436
Query: 89 TALINMYGTLHCTADACKMFENMPVK----DLVAWNSMLDAYASNGEMEDAISLFHMMP- 143
I+ YG + A + FE M K ++VA N+ L + A G +A +F+ +
Sbjct: 437 IVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKD 496
Query: 144 ---LKDLSSFNILISGYSSCGEVLAARSIFDKM----AIKDIVSWNSILSACTRAGDMEK 196
+ D ++N+++ YS GE+ A + +M D++ NS+++ +A +++
Sbjct: 497 IGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDE 556
Query: 197 AFALF---QEMPMKNTI-SWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLS 252
A+ +F +EM +K T+ ++NT+LAG + G+ EA++LF+ M C P+ +T +
Sbjct: 557 AWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNT--- 613
Query: 253 ACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQ----VK 308
L D K + AL++ FK V
Sbjct: 614 --------------------------------LFDCLCKNDEVTLALKMLFKMMDMGCVP 641
Query: 309 DIYCWNAIISGLALHGHGYAALKLFGYMKK 338
D++ +N II GL +G A+ F MKK
Sbjct: 642 DVFTYNTIIFGLVKNGQVKEAMCFFHQMKK 671
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 111/244 (45%), Gaps = 18/244 (7%)
Query: 113 VKDLVAWNSMLDAYASNGEMEDAISLFHMMPLKDLS----SFNILISGYSSCGEVLAARS 168
+ D+ +N +LDAY +G++++ L+ M + + NI+ISG G V A
Sbjct: 817 IPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALD 876
Query: 169 I-FDKMAIKDI----VSWNSILSACTRAGDMEKAFALFQEMP----MKNTISWNTMLAGC 219
+ +D M+ +D ++ ++ +++G + +A LF+ M N +N ++ G
Sbjct: 877 LYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGF 936
Query: 220 LQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSP 279
+ G+ A LF M PD T + ++ +G ++ G+ SGL
Sbjct: 937 GKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDV 996
Query: 280 HVTTALMDMYAKCGSIEQALQIFFKAQVK-----DIYCWNAIISGLALHGHGYAALKLFG 334
+++ K +E+AL +F + + D+Y +N++I L + G A K++
Sbjct: 997 VCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYN 1056
Query: 335 YMKK 338
+++
Sbjct: 1057 EIQR 1060
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/353 (19%), Positives = 141/353 (39%), Gaps = 59/353 (16%)
Query: 41 MQVHGFRADNYTFPILLKAAGKNCASRIGFAFH--GQTIKTGFYRHIFVQTALINMYGTL 98
M+ G + + YTF I ++ G+ A +I A+ + G + T LI+ T
Sbjct: 249 METLGLKPNVYTFTICIRVLGR--AGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTA 306
Query: 99 HCTADACKMFENMPV----KDLVAWNSMLDAYASNGEMEDAISLFHMMP----LKDLSSF 150
A ++FE M D V + ++LD ++ N +++ + M + D+ +F
Sbjct: 307 RKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTF 366
Query: 151 NILISGYSSCGEVLAARSIFDKMAIKDIV----SWNSILSACTR---------------- 190
IL+ G A D M + I+ ++N+++ R
Sbjct: 367 TILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMES 426
Query: 191 -------------------AGDMEKAFALFQEMPMK----NTISWNTMLAGCLQRGQFSE 227
+GD A F++M K N ++ N L + G+ E
Sbjct: 427 LGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDRE 486
Query: 228 AVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMD 287
A +F +K +PD +T ++ + +G ++ IK+ + +G V +L++
Sbjct: 487 AKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLIN 546
Query: 288 MYAKCGSIEQALQIFFKAQ----VKDIYCWNAIISGLALHGHGYAALKLFGYM 336
K +++A ++F + + + +N +++GL +G A++LF M
Sbjct: 547 TLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGM 599
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 95/198 (47%), Gaps = 13/198 (6%)
Query: 118 AWNSMLDAYASNGEMEDAISLFHMMP----LKDLSSFNILISGYSSCGEVLAARSIFDKM 173
+ ++D + +G + +A LF M + + +NILI+G+ GE AA ++F +M
Sbjct: 893 TYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRM 952
Query: 174 AIK----DIVSWNSILSACTRAGDMEKAFALFQEMPMK----NTISWNTMLAGCLQRGQF 225
+ D+ +++ ++ G +++ F+E+ + + +N ++ G + +
Sbjct: 953 VKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRL 1012
Query: 226 SEAVDLFDEMKTTNCL-PDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTA 284
EA+ LF+EMKT+ + PD T S++ G +E KI+ +GL + A
Sbjct: 1013 EEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNA 1072
Query: 285 LMDMYAKCGSIEQALQIF 302
L+ Y+ G E A ++
Sbjct: 1073 LIRGYSLSGKPEHAYAVY 1090
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/333 (19%), Positives = 136/333 (40%), Gaps = 20/333 (6%)
Query: 21 IIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTIKTG 80
I K + G +QA M+ GF + Y++ L+ K+ + + I G
Sbjct: 159 IFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEG 218
Query: 81 FYRHIFVQTALINMYGT---LHCTADACKMFENMPVK-DLVAWNSMLDAYASNGEMEDAI 136
F + ++L+ G + K E + +K ++ + + G++ +A
Sbjct: 219 FRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAY 278
Query: 137 SLFHMMPLK----DLSSFNILISGYSSCGEVLAARSIFDKMAI----KDIVSWNSILSAC 188
+ M + D+ ++ +LI + ++ A+ +F+KM D V++ ++L
Sbjct: 279 EILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRF 338
Query: 189 TRAGDMEKAFALFQEMP----MKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDY 244
+ D++ + EM + + +++ ++ + G F EA D D M+ LP+
Sbjct: 339 SDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNL 398
Query: 245 LTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFK 304
T +++ + L+ +++ G+ + + +D Y K G AL+ F K
Sbjct: 399 HTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEK 458
Query: 305 AQVK----DIYCWNAIISGLALHGHGYAALKLF 333
+ K +I NA + LA G A ++F
Sbjct: 459 MKTKGIAPNIVACNASLYSLAKAGRDREAKQIF 491
>AT3G53700.1 | Symbols: MEE40 | MEE40 (maternal effect embryo arrest
40) | chr3:19900303-19902567 FORWARD
Length = 754
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/345 (21%), Positives = 148/345 (42%), Gaps = 23/345 (6%)
Query: 14 EVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFH 73
+V +N +IK A+L +M +G D TF +++ +
Sbjct: 188 DVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIR 247
Query: 74 GQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKD-----LVAWNSMLDAYAS 128
Q ++ G +++ + DA + M +D +N++++
Sbjct: 248 EQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCK 307
Query: 129 NGEMEDAISLFHMMPLK----DLSSFNILISGYSSCGEVLAARSIFDKMAIKD----IVS 180
G ++ AI + +M + D+ ++N +ISG GEV A + D+M +D V+
Sbjct: 308 AGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVT 367
Query: 181 WNSILSACTRAGDMEKAFALFQEMPMKNTI----SWNTMLAG-CLQRGQFSEAVDLFDEM 235
+N+++S + +E+A L + + K + ++N+++ G CL R A++LF+EM
Sbjct: 368 YNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNH-RVAMELFEEM 426
Query: 236 KTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSI 295
++ C PD T ++ + G L+ + + SG A S L+D + K
Sbjct: 427 RSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKT 486
Query: 296 EQALQIFFKAQV----KDIYCWNAIISGLALHGHGYAALKLFGYM 336
+A +IF + +V ++ +N +I GL A +L M
Sbjct: 487 REAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQM 531
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 104/215 (48%), Gaps = 16/215 (7%)
Query: 104 ACKMFENMPVK----DLVAWNSMLDAYASNGEMEDAISLFHMMPL----KDLSSFNILIS 155
A ++FE M K D +N ++D+ S G++++A+++ M L + + ++N LI
Sbjct: 419 AMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLID 478
Query: 156 GYSSCGEVLAARSIFDKMAI----KDIVSWNSILSACTRAGDMEKAFALFQEMPMK---- 207
G+ + A IFD+M + ++ V++N+++ ++ +E A L +M M+
Sbjct: 479 GFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKP 538
Query: 208 NTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIH 267
+ ++N++L + G +A D+ M + C PD +T +++S G +E K+
Sbjct: 539 DKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLL 598
Query: 268 VYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIF 302
G+ +PH ++ + +A+ +F
Sbjct: 599 RSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLF 633
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 112/241 (46%), Gaps = 16/241 (6%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTI 77
+N +I+ L N A+ + M+ G D +T+ +L+ + Q
Sbjct: 403 FNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQME 462
Query: 78 KTGFYRHIFVQTALINMYGTLHCTADACKMFENMPV----KDLVAWNSMLDAYASNGEME 133
+G R + LI+ + + T +A ++F+ M V ++ V +N+++D + +E
Sbjct: 463 LSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVE 522
Query: 134 DAISLFHMMPLK----DLSSFNILISGYSSCGEVLAARSIFDKMAIK----DIVSWNSIL 185
DA L M ++ D ++N L++ + G++ A I M DIV++ +++
Sbjct: 523 DAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLI 582
Query: 186 SACTRAGDMEKAFALFQEMPMK----NTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCL 241
S +AG +E A L + + MK ++N ++ G ++ + +EA++LF EM N
Sbjct: 583 SGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEA 642
Query: 242 P 242
P
Sbjct: 643 P 643
>AT3G16710.1 | Symbols: | INVOLVED IN: biological_process unknown;
LOCATED IN: cellular_component unknown; EXPRESSED IN: 10
plant structures; EXPRESSED DURING: LP.10 ten leaves
visible, petal differentiation and expansion stage, D
bilateral stage, E expanded cotyledon stage; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT5G41170.1); Has 25882 Blast hits to 6002
proteins in 187 species: Archae - 3; Bacteria - 22;
Metazoa - 744; Fungi - 522; Plants - 23419; Viruses - 0;
Other Eukaryotes - 1172 (source: NCBI BLink). |
chr3:5690020-5691543 FORWARD
Length = 507
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 130/287 (45%), Gaps = 20/287 (6%)
Query: 72 FHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFEN---MPVK-DLVAWNSMLDAYA 127
F G+ +K GF + T+L+N Y + DA +F+ M K ++V + +++
Sbjct: 140 FLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLC 199
Query: 128 SNGEMEDAISLFHMM----PLKDLSSFNILISGYSSCGEVLAA----RSIFDKMAIKDIV 179
N + A+ LF+ M ++ ++N L++G G A R + + +++
Sbjct: 200 KNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVI 259
Query: 180 SWNSILSACTRAGDMEKAFALFQEMPM----KNTISWNTMLAGCLQRGQFSEAVDLFDEM 235
++ +++ A + G + +A L+ M + ++ +++ G G EA +F M
Sbjct: 260 TFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLM 319
Query: 236 KTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSI 295
+ C P+ + T+++ +E G+KI G+ ++ T L+ Y G
Sbjct: 320 ERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRP 379
Query: 296 EQALQIFFKAQVK----DIYCWNAIISGLALHGHGYAALKLFGYMKK 338
+ A ++F + + DI +N ++ GL +G AL +F YM+K
Sbjct: 380 DVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRK 426
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/341 (20%), Positives = 140/341 (41%), Gaps = 30/341 (8%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTI 77
WN I E A+ + + GF+ + T+ L++ KN Q
Sbjct: 166 WNRI----------EDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMG 215
Query: 78 KTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVK----DLVAWNSMLDAYASNGEME 133
G ++ AL+ + DA + +M + +++ + +++DA+ G++
Sbjct: 216 TNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLM 275
Query: 134 DAISLFHMM----PLKDLSSFNILISGYSSCGEVLAARSIFDKM----AIKDIVSWNSIL 185
+A L+++M D+ ++ LI+G G + AR +F M + V + +++
Sbjct: 276 EAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLI 335
Query: 186 SACTRAGDMEKAFALFQEMPMK----NTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCL 241
++ +E +F EM K NTI++ ++ G G+ A ++F++M +
Sbjct: 336 HGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAP 395
Query: 242 PDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQI 301
PD T +L G +E + I Y + + T ++ K G +E A +
Sbjct: 396 PDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDL 455
Query: 302 F----FKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMKK 338
F K ++ + +ISG G + A LF MK+
Sbjct: 456 FCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKE 496
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 88/182 (48%), Gaps = 16/182 (8%)
Query: 78 KTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVA----WNSMLDAYASNGEME 133
+ G Y + + T LI+ + D K+F M K +VA + ++ Y G +
Sbjct: 321 RNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPD 380
Query: 134 DAISLFHMMPLK----DLSSFNILISGYSSCGEVLAARSIFDKMAIKD----IVSWNSIL 185
A +F+ M + D+ ++N+L+ G G+V A IF+ M ++ IV++ I+
Sbjct: 381 VAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIII 440
Query: 186 SACTRAGDMEKAFALFQEMPMK----NTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCL 241
+ G +E AF LF + K N I++ TM++G +RG EA LF +MK L
Sbjct: 441 QGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFL 500
Query: 242 PD 243
P+
Sbjct: 501 PN 502
>AT3G16010.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5434142-5436244 FORWARD
Length = 642
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/313 (21%), Positives = 140/313 (44%), Gaps = 19/313 (6%)
Query: 7 NCFMPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCAS 66
NC P+ ++ + ++ + VG E+A+ + M+ G YT+ L+K GK
Sbjct: 262 NCMQPTEKI--YTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRV 319
Query: 67 RIGFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPV----KDLVAWNSM 122
+ F+ ++ G + L+N+ G + + +F M + +V++N++
Sbjct: 320 DEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTV 379
Query: 123 LDA-YASNGEMEDAISLFHMMPLKDLS----SFNILISGYSSCGEVLAARSIFDKMAIKD 177
+ A + S + + S F M +S +++ILI GY V A + ++M K
Sbjct: 380 IKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKG 439
Query: 178 I----VSWNSILSACTRAGDMEKAFALFQEMPMK----NTISWNTMLAGCLQRGQFSEAV 229
++ S+++A +A E A LF+E+ ++ + M+ + G+ SEAV
Sbjct: 440 FPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAV 499
Query: 230 DLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMY 289
DLF+EMK PD +++S G + + +G + + +++ +
Sbjct: 500 DLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGF 559
Query: 290 AKCGSIEQALQIF 302
A+ G +A+++F
Sbjct: 560 ARTGVPRRAIEMF 572
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 96/233 (41%), Gaps = 16/233 (6%)
Query: 41 MQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTIKTGFYRHIFVQTALINMYGTLHC 100
M+ +T+ IL+ K + + GF +LIN G
Sbjct: 400 MKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKR 459
Query: 101 TADACKMF----ENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMPLK----DLSSFNI 152
A ++F EN + M+ + G++ +A+ LF+ M + D+ ++N
Sbjct: 460 YEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNA 519
Query: 153 LISGYSSCGEVLAARSIFDKMAIK----DIVSWNSILSACTRAGDMEKAFALFQEMP--- 205
L+SG G + A S+ KM DI S N IL+ R G +A +F+ +
Sbjct: 520 LMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSG 579
Query: 206 -MKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHL 257
+ +++NT+L G F EA + EMK D +T +S+L A ++
Sbjct: 580 IKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDAVGNV 632
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 62/130 (47%), Gaps = 4/130 (3%)
Query: 177 DIVSWNSILSACTRAGDMEKAFALFQEMP---MKNTIS-WNTMLAGCLQRGQFSEAVDLF 232
D +++++++S+ + G + A LF EM M+ T + T+L + G+ +A+DLF
Sbjct: 232 DTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLF 291
Query: 233 DEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKC 292
+EMK C P T T ++ G ++ + + GL LM++ K
Sbjct: 292 EEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKV 351
Query: 293 GSIEQALQIF 302
G +E+ +F
Sbjct: 352 GRVEELTNVF 361
>AT2G02150.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:547389-552229 REVERSE
Length = 1141
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/269 (20%), Positives = 123/269 (45%), Gaps = 20/269 (7%)
Query: 89 TALINMYGTLHCTADACKMFENM----PVKDLVAWNSMLDAYASNGEMEDAISLFHMMPL 144
L++ + L T D + F++M + +N M+D G++E A LF M
Sbjct: 99 NGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKF 158
Query: 145 K----DLSSFNILISGYSSCGEVLAARSIFDKMAI----KDIVSWNSILSACTRAGDMEK 196
+ D ++N +I G+ G + F++M D++++N++++ + G +
Sbjct: 159 RGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPI 218
Query: 197 AFALFQEMP----MKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLS 252
++EM N +S++T++ + G +A+ + +M+ +P+ T TS++
Sbjct: 219 GLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLID 278
Query: 253 ACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQ----VK 308
A +G+L ++ + G+ + TAL+D +++A ++F K +
Sbjct: 279 ANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIP 338
Query: 309 DIYCWNAIISGLALHGHGYAALKLFGYMK 337
++ +NA+I G + AL+L +K
Sbjct: 339 NLASYNALIHGFVKAKNMDRALELLNELK 367
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 116/254 (45%), Gaps = 22/254 (8%)
Query: 105 CKMFE------NMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMP----LKDLSSFNILI 154
C +F+ N+ V ++++ G +E+AI F M S N L+
Sbjct: 43 CDVFDVLWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLL 102
Query: 155 SGYSSCGEVLAARSIFDKM----AIKDIVSWNSILSACTRAGDMEKAFALFQEMPMK--- 207
++ G+ + F M A + ++N ++ + GD+E A LF+EM +
Sbjct: 103 HRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLV 162
Query: 208 -NTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKI 266
+T+++N+M+ G + G+ + V F+EMK C PD +T ++++ G L G++
Sbjct: 163 PDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEF 222
Query: 267 HVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQ----VKDIYCWNAIISGLAL 322
+ +GL + + L+D + K G ++QA++ + + V + Y + ++I
Sbjct: 223 YREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCK 282
Query: 323 HGHGYAALKLFGYM 336
G+ A +L M
Sbjct: 283 IGNLSDAFRLGNEM 296
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 65/314 (20%), Positives = 141/314 (44%), Gaps = 21/314 (6%)
Query: 29 GNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTIKTGFYRHIFVQ 88
G +QA+ YV+M+ G + YT+ L+ A K F + ++ G ++
Sbjct: 249 GMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTY 308
Query: 89 TALINMYGTLHCTADACKMFENMP----VKDLVAWNSMLDAYASNGEMEDAISLFHMMPL 144
TALI+ +A ++F M + +L ++N+++ + M+ A+ L + +
Sbjct: 309 TALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKG 368
Query: 145 K----DLSSFNILISGYSSCGEVLAARSIFDKM---AIK-DIVSWNSILSACTRAGDMEK 196
+ DL + I G S ++ AA+ + ++M IK + + + +++ A ++G+ +
Sbjct: 369 RGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTE 428
Query: 197 AFALFQEMPMKN----TISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLP-DYLTATSVL 251
L EM + +++ ++ G + S+AVD F+ + L + T+++
Sbjct: 429 GLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMI 488
Query: 252 SACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFK-AQVK-- 308
+E + + GL T+LMD K G++ +AL + K A++
Sbjct: 489 DGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMK 548
Query: 309 -DIYCWNAIISGLA 321
D+ + +++ GL+
Sbjct: 549 LDLLAYTSLVWGLS 562
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD
Length = 806
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/341 (19%), Positives = 145/341 (42%), Gaps = 16/341 (4%)
Query: 13 LEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAF 72
++V + I+ +G+ + A+ M+ + D + ++ K+
Sbjct: 259 IDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYL 318
Query: 73 HGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVK----DLVAWNSMLDAYAS 128
+ ++ G ++F +I+ + + +DA ++ +M + D++ +N+++ A
Sbjct: 319 FSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVK 378
Query: 129 NGEMEDAISL----FHMMPLKDLSSFNILISGYSSCGEVLAARSIFDKMAIKDIVSWNSI 184
G++ +A L H D ++N +I G+ A+ +FD MA D+V++N+I
Sbjct: 379 EGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTI 438
Query: 185 LSACTRAGDMEKAFALFQEMPMK----NTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNC 240
+ RA +++ L +E+ + NT ++NT++ G + + A DLF EM +
Sbjct: 439 IDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGV 498
Query: 241 LPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQ 300
PD +T +L LE +++ S + ++ K +++A
Sbjct: 499 CPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWD 558
Query: 301 IFFKAQV----KDIYCWNAIISGLALHGHGYAALKLFGYMK 337
+F + D+ +N +ISG A LF MK
Sbjct: 559 LFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMK 599
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 83/386 (21%), Positives = 159/386 (41%), Gaps = 70/386 (18%)
Query: 19 NEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTIK 78
N++I + + + A+ Y M++ + Y+F IL+K + G+ K
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTK 169
Query: 79 TGFYRHIFVQTALIN-------------MYGTLHCTA--DACKMFENM------PVKDLV 117
GF + L++ ++G + T +A +F+ M PV ++
Sbjct: 170 LGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPV--VI 227
Query: 118 AWNSMLDAYASNGEMEDAISLFHMMPLK----DLSSFNILISGYSSCGEVLAARSIFDKM 173
+N++++ G + +A +L + M K D+ ++ +++G G+ +A ++ KM
Sbjct: 228 TFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKM 287
Query: 174 A---IK-DIVSWNSILSACTRAGDMEKAFALFQEMPMK----NTISWNTMLAGCLQRGQF 225
IK D+V +++I+ + G A LF EM K N ++N M+ G G++
Sbjct: 288 EETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRW 347
Query: 226 SEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKI---------------HVYA 270
S+A L +M PD LT +++SA G L K+ +
Sbjct: 348 SDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSM 407
Query: 271 IYS--------------GLASSPHVTT--ALMDMYAKCGSIEQALQIF----FKAQVKDI 310
IY L +SP V T ++D+Y + +++ +Q+ + V +
Sbjct: 408 IYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANT 467
Query: 311 YCWNAIISGLALHGHGYAALKLFGYM 336
+N +I G + AA LF M
Sbjct: 468 TTYNTLIHGFCEVDNLNAAQDLFQEM 493
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 112/270 (41%), Gaps = 57/270 (21%)
Query: 49 DNYTFPILLKAAGKNCASRIGFAFHGQTI-KTGFYRHIFVQTALIN--MYGTLHCTA--D 103
D TF L+ A+ K G F + + +R IF T N +YG D
Sbjct: 365 DVLTFNALISASVKE-----GKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDD 419
Query: 104 ACKMFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMPLKDL----SSFNILISGYSS 159
A MF+ M D+V +N+++D Y +++ + L + + L +++N LI G+
Sbjct: 420 AKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCE 479
Query: 160 CGEVLAARSIFDKM---------------------------AIK------------DIVS 180
+ AA+ +F +M A++ D V+
Sbjct: 480 VDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVA 539
Query: 181 WNSILSACTRAGDMEKAFALFQEMPM----KNTISWNTMLAGCLQRGQFSEAVDLFDEMK 236
+N I+ + +++A+ LF +P+ + ++N M++G + S+A LF +MK
Sbjct: 540 YNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMK 599
Query: 237 TTNCLPDYLTATSVLSACAHLGSLETGIKI 266
PD T +++ C G ++ I++
Sbjct: 600 DNGHEPDNSTYNTLIRGCLKAGEIDKSIEL 629
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 98/242 (40%), Gaps = 28/242 (11%)
Query: 107 MFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMPLK----DLSSFNILISGYSSCGE 162
M + P V N ++ + + AISL+ M ++ ++ SFNILI + C +
Sbjct: 97 MVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHK 156
Query: 163 VLAARSIFDKMAI----KDIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAG 218
+ + S F K+ D+V++N++L + +A ALF G
Sbjct: 157 LSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALF----------------G 200
Query: 219 CLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASS 278
+ F EAV LFD+M P +T ++++ G + + + GL
Sbjct: 201 YMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHID 260
Query: 279 PHVTTALMDMYAKCGSIEQALQIFFKAQV----KDIYCWNAIISGLALHGHGYAALKLFG 334
+++ K G + AL + K + D+ ++AII L GH A LF
Sbjct: 261 VVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFS 320
Query: 335 YM 336
M
Sbjct: 321 EM 322
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 71/144 (49%), Gaps = 12/144 (8%)
Query: 115 DLVAWNSMLDAYASNGEMEDAISLFHMMPLK----DLSSFNILISGYSSCGEVLAARSIF 170
D + N +L + N ++E+A+ LF ++ + D ++NI+I G +V A +F
Sbjct: 501 DTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLF 560
Query: 171 DKMAI----KDIVSWNSILSACTRAGDMEKAFALFQEMP----MKNTISWNTMLAGCLQR 222
+ I D+ ++N ++S + A LF +M + ++NT++ GCL+
Sbjct: 561 CSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKA 620
Query: 223 GQFSEAVDLFDEMKTTNCLPDYLT 246
G+ ++++L EM++ D T
Sbjct: 621 GEIDKSIELISEMRSNGFSGDAFT 644
>AT3G22470.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:7966066-7967925 REVERSE
Length = 619
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/341 (19%), Positives = 150/341 (43%), Gaps = 20/341 (5%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTI 77
++ ++ L G +AV M R D T L+ + +
Sbjct: 143 FSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMV 202
Query: 78 KTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDL----VAWNSMLDAYASNGEME 133
+ GF ++N +A A +F M +++ V ++ ++D+ +G +
Sbjct: 203 EYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFD 262
Query: 134 DAISLFHMMPLK----DLSSFNILISGYSSCGE----VLAARSIFDKMAIKDIVSWNSIL 185
DA+SLF+ M +K D+ +++ LI G + G+ R + + I D+V++++++
Sbjct: 263 DALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALI 322
Query: 186 SACTRAGDMEKAFALFQEMPMK----NTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCL 241
+ G + +A L+ EM + +TI++N+++ G + EA +FD M + C
Sbjct: 323 DVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCE 382
Query: 242 PDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQI 301
PD +T + ++++ ++ G+++ GL + L+ + + G + A ++
Sbjct: 383 PDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKEL 442
Query: 302 F----FKAQVKDIYCWNAIISGLALHGHGYAALKLFGYMKK 338
F + + + ++ GL +G AL++F M+K
Sbjct: 443 FQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQK 483
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/278 (20%), Positives = 124/278 (44%), Gaps = 16/278 (5%)
Query: 41 MQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTIKTGFYRHIFVQTALINMYGTLHC 100
M+++G D YT I++ + F+ G+ K G+ + L+N +
Sbjct: 96 MELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGR 155
Query: 101 TADAC----KMFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMP----LKDLSSFNI 152
++A +M E DLV +++++ G + +A+ L M D ++
Sbjct: 156 VSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGP 215
Query: 153 LISGYSSCGEVLAARSIFDKMAIKDI----VSWNSILSACTRAGDMEKAFALFQEMPMK- 207
+++ G A +F KM ++I V ++ ++ + + G + A +LF EM MK
Sbjct: 216 VLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKG 275
Query: 208 ---NTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGI 264
+ +++++++ G G++ + + EM N +PD +T ++++ G L
Sbjct: 276 IKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAK 335
Query: 265 KIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIF 302
+++ I G+A +L+D + K + +A Q+F
Sbjct: 336 ELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMF 373
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 113/262 (43%), Gaps = 20/262 (7%)
Query: 14 EVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGK-NCASRIGFAF 72
+V ++ +I + G +A Y M G D T+ L+ K NC F
Sbjct: 314 DVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMF 373
Query: 73 HGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLV----AWNSMLDAYAS 128
+ G I + LIN Y D ++F + K L+ +N+++ +
Sbjct: 374 D-LMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQ 432
Query: 129 NGEMEDAISLFHMMPLKDLS----SFNILISGYSSCGEVLAARSIFDKMAIKD----IVS 180
+G++ A LF M + + ++ IL+ G GE+ A IF+KM I
Sbjct: 433 SGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGI 492
Query: 181 WNSILSACTRAGDMEKAFALFQEMPMK----NTISWNTMLAGCLQRGQFSEAVDLFDEMK 236
+N I+ A ++ A++LF + K + +++N M+ G ++G SEA LF +MK
Sbjct: 493 YNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMK 552
Query: 237 TTNCLPDYLTATSVLSACAHLG 258
C PD T ++ AHLG
Sbjct: 553 EDGCTPDDFTYNILIR--AHLG 572
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 96/206 (46%), Gaps = 18/206 (8%)
Query: 72 FHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVK----DLVAWNSMLDAYA 127
+ + I G +LI+ + +C +A +MF+ M K D+V ++ ++++Y
Sbjct: 337 LYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYC 396
Query: 128 SNGEMEDAISLFHMMPLKDLS----SFNILISGYSSCGEVLAARSIFDKMAIK----DIV 179
++D + LF + K L ++N L+ G+ G++ AA+ +F +M + +V
Sbjct: 397 KAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVV 456
Query: 180 SWNSILSACTRAGDMEKAFALFQEMPMKNTIS-----WNTMLAGCLQRGQFSEAVDLFDE 234
++ +L G++ KA +F++M K+ ++ +N ++ G + +A LF
Sbjct: 457 TYGILLDGLCDNGELNKALEIFEKM-QKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCS 515
Query: 235 MKTTNCLPDYLTATSVLSACAHLGSL 260
+ PD +T ++ GSL
Sbjct: 516 LSDKGVKPDVVTYNVMIGGLCKKGSL 541
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD
Length = 666
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/341 (19%), Positives = 145/341 (42%), Gaps = 16/341 (4%)
Query: 13 LEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAF 72
++V + I+ +G+ + A+ M+ + D + ++ K+
Sbjct: 259 IDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYL 318
Query: 73 HGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVK----DLVAWNSMLDAYAS 128
+ ++ G ++F +I+ + + +DA ++ +M + D++ +N+++ A
Sbjct: 319 FSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVK 378
Query: 129 NGEMEDAISL----FHMMPLKDLSSFNILISGYSSCGEVLAARSIFDKMAIKDIVSWNSI 184
G++ +A L H D ++N +I G+ A+ +FD MA D+V++N+I
Sbjct: 379 EGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTI 438
Query: 185 LSACTRAGDMEKAFALFQEMPMK----NTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNC 240
+ RA +++ L +E+ + NT ++NT++ G + + A DLF EM +
Sbjct: 439 IDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGV 498
Query: 241 LPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQ 300
PD +T +L LE +++ S + ++ K +++A
Sbjct: 499 CPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWD 558
Query: 301 IFFKAQV----KDIYCWNAIISGLALHGHGYAALKLFGYMK 337
+F + D+ +N +ISG A LF MK
Sbjct: 559 LFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMK 599
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 83/386 (21%), Positives = 159/386 (41%), Gaps = 70/386 (18%)
Query: 19 NEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTIK 78
N++I + + + A+ Y M++ + Y+F IL+K + G+ K
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTK 169
Query: 79 TGFYRHIFVQTALIN-------------MYGTLHCTA--DACKMFENM------PVKDLV 117
GF + L++ ++G + T +A +F+ M PV ++
Sbjct: 170 LGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPV--VI 227
Query: 118 AWNSMLDAYASNGEMEDAISLFHMMPLK----DLSSFNILISGYSSCGEVLAARSIFDKM 173
+N++++ G + +A +L + M K D+ ++ +++G G+ +A ++ KM
Sbjct: 228 TFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKM 287
Query: 174 A---IK-DIVSWNSILSACTRAGDMEKAFALFQEMPMK----NTISWNTMLAGCLQRGQF 225
IK D+V +++I+ + G A LF EM K N ++N M+ G G++
Sbjct: 288 EETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRW 347
Query: 226 SEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKI---------------HVYA 270
S+A L +M PD LT +++SA G L K+ +
Sbjct: 348 SDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSM 407
Query: 271 IYS--------------GLASSPHVTT--ALMDMYAKCGSIEQALQIF----FKAQVKDI 310
IY L +SP V T ++D+Y + +++ +Q+ + V +
Sbjct: 408 IYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANT 467
Query: 311 YCWNAIISGLALHGHGYAALKLFGYM 336
+N +I G + AA LF M
Sbjct: 468 TTYNTLIHGFCEVDNLNAAQDLFQEM 493
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 112/270 (41%), Gaps = 57/270 (21%)
Query: 49 DNYTFPILLKAAGKNCASRIGFAFHGQTI-KTGFYRHIFVQTALIN--MYGTLHCTA--D 103
D TF L+ A+ K G F + + +R IF T N +YG D
Sbjct: 365 DVLTFNALISASVKE-----GKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDD 419
Query: 104 ACKMFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMPLKDL----SSFNILISGYSS 159
A MF+ M D+V +N+++D Y +++ + L + + L +++N LI G+
Sbjct: 420 AKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCE 479
Query: 160 CGEVLAARSIFDKM---------------------------AIK------------DIVS 180
+ AA+ +F +M A++ D V+
Sbjct: 480 VDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVA 539
Query: 181 WNSILSACTRAGDMEKAFALFQEMPM----KNTISWNTMLAGCLQRGQFSEAVDLFDEMK 236
+N I+ + +++A+ LF +P+ + ++N M++G + S+A LF +MK
Sbjct: 540 YNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMK 599
Query: 237 TTNCLPDYLTATSVLSACAHLGSLETGIKI 266
PD T +++ C G ++ I++
Sbjct: 600 DNGHEPDNSTYNTLIRGCLKAGEIDKSIEL 629
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 98/242 (40%), Gaps = 28/242 (11%)
Query: 107 MFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMPLK----DLSSFNILISGYSSCGE 162
M + P V N ++ + + AISL+ M ++ ++ SFNILI + C +
Sbjct: 97 MVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHK 156
Query: 163 VLAARSIFDKMAI----KDIVSWNSILSACTRAGDMEKAFALFQEMPMKNTISWNTMLAG 218
+ + S F K+ D+V++N++L + +A ALF G
Sbjct: 157 LSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALF----------------G 200
Query: 219 CLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASS 278
+ F EAV LFD+M P +T ++++ G + + + GL
Sbjct: 201 YMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHID 260
Query: 279 PHVTTALMDMYAKCGSIEQALQIFFKAQ----VKDIYCWNAIISGLALHGHGYAALKLFG 334
+++ K G + AL + K + D+ ++AII L GH A LF
Sbjct: 261 VVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFS 320
Query: 335 YM 336
M
Sbjct: 321 EM 322
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 72/148 (48%), Gaps = 12/148 (8%)
Query: 115 DLVAWNSMLDAYASNGEMEDAISLFHMMPLK----DLSSFNILISGYSSCGEVLAARSIF 170
D + N +L + N ++E+A+ LF ++ + D ++NI+I G +V A +F
Sbjct: 501 DTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLF 560
Query: 171 DKMAI----KDIVSWNSILSACTRAGDMEKAFALFQEMP----MKNTISWNTMLAGCLQR 222
+ I D+ ++N ++S + A LF +M + ++NT++ GCL+
Sbjct: 561 CSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKA 620
Query: 223 GQFSEAVDLFDEMKTTNCLPDYLTATSV 250
G+ ++++L EM++ D T V
Sbjct: 621 GEIDKSIELISEMRSNGFSGDAFTIKMV 648
>AT3G54980.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:20370293-20372848 FORWARD
Length = 851
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/334 (19%), Positives = 140/334 (41%), Gaps = 40/334 (11%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTI 77
+N ++ H N + A + + N+ G + +NYT+ IL+ +N +
Sbjct: 481 YNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMT 540
Query: 78 KTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLV-----AWNSMLDAYASNGEM 132
+ + V +IN + T+ A ++ NM + + ++NS++D + GEM
Sbjct: 541 SSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEM 600
Query: 133 EDAISLFHMMPLKDLSSFNILISGYSSCGEVLAARSIFDKMAIKDIVSWNSILSACTRAG 192
+ A++ + M CG ++ +++++ S+++ +
Sbjct: 601 DSAVAAYEEM-----------------CGNGISP----------NVITYTSLMNGLCKNN 633
Query: 193 DMEKAFALFQEMPMK----NTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTAT 248
M++A + EM K + ++ ++ G +R A LF E+ P
Sbjct: 634 RMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYN 693
Query: 249 SVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQ-- 306
S++S +LG++ + ++ + GL T L+D K G++ A +++ + Q
Sbjct: 694 SLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAV 753
Query: 307 --VKDIYCWNAIISGLALHGHGYAALKLFGYMKK 338
V D + I++GL+ G +K+F MKK
Sbjct: 754 GLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKK 787
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 105/213 (49%), Gaps = 16/213 (7%)
Query: 79 TGFYRHIFVQTALINMYGTLHCTADACKMFENMPVK----DLVAWNSMLDAYASNGEMED 134
G ++ T+L+N + A +M + M K D+ A+ +++D + ME
Sbjct: 613 NGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMES 672
Query: 135 AISLFHMMPLKDLSS----FNILISGYSSCGEVLAARSIFDKMAIK----DIVSWNSILS 186
A +LF + + L+ +N LISG+ + G ++AA ++ KM D+ ++ +++
Sbjct: 673 ASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLID 732
Query: 187 ACTRAGDMEKAFALFQEMP----MKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLP 242
+ G++ A L+ EM + + I + ++ G ++GQF + V +F+EMK N P
Sbjct: 733 GLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTP 792
Query: 243 DYLTATSVLSACAHLGSLETGIKIHVYAIYSGL 275
+ L +V++ G+L+ ++H + G+
Sbjct: 793 NVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGI 825
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 107/261 (40%), Gaps = 20/261 (7%)
Query: 18 WNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTI 77
+N II G + AV Y M +G + T+ L+ KN +
Sbjct: 587 YNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMK 646
Query: 78 KTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVA----WNSMLDAYASNGEME 133
G I ALI+ + A +F + + L +NS++ + + G M
Sbjct: 647 NKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMV 706
Query: 134 DAISLFHMMPLKD-----LSSFNILISGYSSCGEVLAARSIFDKMA----IKDIVSWNSI 184
A+ L+ M LKD L ++ LI G G ++ A ++ +M + D + + I
Sbjct: 707 AALDLYKKM-LKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVI 765
Query: 185 LSACTRAGDMEKAFALFQEMPMKNTIS----WNTMLAGCLQRGQFSEAVDLFDEMKTTNC 240
++ ++ G K +F+EM N +N ++AG + G EA L DEM
Sbjct: 766 VNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGI 825
Query: 241 LPDYLTATSVLSACAHLGSLE 261
LPD T ++S +G+L+
Sbjct: 826 LPDGATFDILVS--GQVGNLQ 844
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/312 (20%), Positives = 129/312 (41%), Gaps = 30/312 (9%)
Query: 49 DNYTFPILLKAAGKNCASRIGFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTAD----A 104
+ YT IL N I + + G ++ T+LI T HC + A
Sbjct: 305 ETYTSVILASVKQGNMDDAI--RLKDEMLSDGISMNVVAATSLI----TGHCKNNDLVSA 358
Query: 105 CKMFENM----PVKDLVAWNSMLDAYASNGEMEDAISLFHMMPLKDL--SSFNI--LISG 156
+F+ M P + V ++ +++ + NGEME A+ + M + L S F++ +I G
Sbjct: 359 LVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQG 418
Query: 157 YSSCGEVLAARSIFD---KMAIKDIVSWNSILSACTRAGDMEKAFALFQEMPMK----NT 209
+ + A +FD + + ++ N+ILS + G ++A L +M + N
Sbjct: 419 WLKGQKHEEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNV 478
Query: 210 ISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVY 269
+S+N ++ G ++ A +F + P+ T + ++ C + +++ +
Sbjct: 479 VSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNH 538
Query: 270 AIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIYC-----WNAIISGLALHG 324
S + + V +++ K G +A ++ + C +N+II G G
Sbjct: 539 MTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEG 598
Query: 325 HGYAALKLFGYM 336
+A+ + M
Sbjct: 599 EMDSAVAAYEEM 610
>AT1G12300.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:4184163-4186076 REVERSE
Length = 637
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/321 (22%), Positives = 142/321 (44%), Gaps = 30/321 (9%)
Query: 41 MQVHGFRADNYTFPILLKAAGKNCASR-----IGFAFHGQTIKTGFYRHIFVQTALINMY 95
M++ G + YT I++ NC R + F+ G+ IK G+ + + LIN
Sbjct: 114 MELKGIAHNLYTLSIMI-----NCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGL 168
Query: 96 GTLHCTADACKMFENMP----VKDLVAWNSMLDAYASNGEMEDAISLFHMMP----LKDL 147
++A ++ + M DL+ N++++ +G+ +A+ L M +
Sbjct: 169 CLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNA 228
Query: 148 SSFNILISGYSSCGEVLAARSIFDKMAIKDI----VSWNSILSACTRAGDMEKAFALFQE 203
++ +++ G+ A + KM ++I V ++ I+ + G ++ AF LF E
Sbjct: 229 VTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNE 288
Query: 204 MPMK----NTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGS 259
M MK N I++N ++ G G++ + L +M P+ +T + ++ + G
Sbjct: 289 MEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGK 348
Query: 260 LETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQ----IFFKAQVKDIYCWNA 315
L ++H I+ G+A T+L+D + K +++A Q + K +I +N
Sbjct: 349 LREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNI 408
Query: 316 IISGLALHGHGYAALKLFGYM 336
+I+G L+LF M
Sbjct: 409 LINGYCKANRIDDGLELFRKM 429
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 87/185 (47%), Gaps = 18/185 (9%)
Query: 91 LINMYGTLHCTADACKMFENMPVK----DLVAWNSMLDAYASNGEMEDAISLFHMMPLK- 145
LIN Y + D ++F M ++ D V +N+++ + G++ A LF M +
Sbjct: 409 LINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRK 468
Query: 146 ---DLSSFNILISGYSSCGEVLAARSIFDKMAIK----DIVSWNSILSACTRAGDMEKAF 198
++ ++ IL+ G GE A IF+K+ DI +N I+ A ++ A+
Sbjct: 469 VPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAW 528
Query: 199 ALFQEMPMKNTI----SWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSAC 254
LF +P+K ++N M+ G ++G SEA LF +M+ PD T ++
Sbjct: 529 DLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIR-- 586
Query: 255 AHLGS 259
AHLG
Sbjct: 587 AHLGD 591
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/318 (19%), Positives = 131/318 (41%), Gaps = 20/318 (6%)
Query: 41 MQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTIKTGFYRHIFVQTALINMYGTLHC 100
M+ + D + I++ K+ + F + G +I LI +
Sbjct: 254 MEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGR 313
Query: 101 TADACKMFENMPVK----DLVAWNSMLDAYASNGEMEDAISL----FHMMPLKDLSSFNI 152
D K+ +M + ++V ++ ++D++ G++ +A L H D ++
Sbjct: 314 WDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTS 373
Query: 153 LISGYSSCGEVLAARSIFDKMAIK----DIVSWNSILSACTRAGDMEKAFALFQEMPMK- 207
LI G+ + A + D M K +I ++N +++ +A ++ LF++M ++
Sbjct: 374 LIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRG 433
Query: 208 ---NTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGI 264
+T+++NT++ G + G+ + A +LF EM + P+ +T +L G E +
Sbjct: 434 VVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKAL 493
Query: 265 KIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIF----FKAQVKDIYCWNAIISGL 320
+I S + + ++ ++ A +F K + +N +I GL
Sbjct: 494 EIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGL 553
Query: 321 ALHGHGYAALKLFGYMKK 338
G A LF M++
Sbjct: 554 CKKGPLSEAELLFRKMEE 571
>AT1G52640.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:19608857-19610428 REVERSE
Length = 523
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 114/253 (45%), Gaps = 27/253 (10%)
Query: 72 FHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMP----VKDLVAWNSMLDAYA 127
F G+ G + L+ + + + A K+F+ M V DL+A+N++LDA
Sbjct: 195 FFGKAKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALC 254
Query: 128 SNGEMEDAISLFHMMP---LK-DLSSFNILISGYSSCGEVLAARSIFDKMAIKDIV---- 179
+G+++ +F M LK D SF I I Y G+V +A + D+M D+V
Sbjct: 255 KSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVY 314
Query: 180 SWNSILSACTRAGDMEKAFALFQEMPMK----NTISWNTMLAGCLQRGQFSEAVDLFDEM 235
++N I+ + ++ A+ L EM K +T ++N+++A + + A L M
Sbjct: 315 TFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRM 374
Query: 236 KTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASS---PHV---TTALMDMY 289
T CLPD T VL +G + + I+ G++ P V T + +
Sbjct: 375 DRTKCLPDRHTYNMVLKLLIRIGRFDRATE-----IWEGMSERKFYPTVATYTVMIHGLV 429
Query: 290 AKCGSIEQALQIF 302
K G +E+A + F
Sbjct: 430 RKKGKLEEACRYF 442
>AT1G12620.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:4294883-4296748 REVERSE
Length = 621
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/319 (20%), Positives = 137/319 (42%), Gaps = 20/319 (6%)
Query: 40 NMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTIKTGFYRHIFVQTALINMYGTLH 99
M+ + D + I++ K+ + F + GF I + T LI +
Sbjct: 237 KMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAG 296
Query: 100 CTADACKMFENMPVK----DLVAWNSMLDAYASNGEMEDAISLFHMMPLKDLS----SFN 151
D K+ +M + D+VA+++++D + G++ +A L M + +S ++
Sbjct: 297 RWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYT 356
Query: 152 ILISGYSSCGEVLAARSIFDKMAIK----DIVSWNSILSACTRAGDMEKAFALFQEMPMK 207
LI G+ ++ A + D M K +I ++N +++ +A ++ LF++M ++
Sbjct: 357 SLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLR 416
Query: 208 ----NTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETG 263
+T+++NT++ G + G+ A +LF EM + PD ++ +L G E
Sbjct: 417 GVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKA 476
Query: 264 IKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIF----FKAQVKDIYCWNAIISG 319
++I S + + ++ ++ A +F K D+ +N +I G
Sbjct: 477 LEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGG 536
Query: 320 LALHGHGYAALKLFGYMKK 338
L G A LF M++
Sbjct: 537 LCKKGSLSEADLLFRKMEE 555
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/340 (19%), Positives = 144/340 (42%), Gaps = 37/340 (10%)
Query: 12 SLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFA 71
L+ +++ II G+ + A + M++ GF+AD + L++ GF
Sbjct: 244 KLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIR----------GFC 293
Query: 72 FHGQ----------TIKTGFYRHIFVQTALINMY---GTLHCTADACK-MFENMPVKDLV 117
+ G+ IK + +ALI+ + G L + K M + D V
Sbjct: 294 YAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTV 353
Query: 118 AWNSMLDAYASNGEMEDAISLFHMMPLK----DLSSFNILISGYSSCGEVLAARSIFDKM 173
+ S++D + +++ A + +M K ++ +FNILI+GY + +F KM
Sbjct: 354 TYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKM 413
Query: 174 AIK----DIVSWNSILSACTRAGDMEKAFALFQEMPMK----NTISWNTMLAGCLQRGQF 225
+++ D V++N+++ G +E A LFQEM + + +S+ +L G G+
Sbjct: 414 SLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEP 473
Query: 226 SEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTAL 285
+A+++F++++ + D ++ + ++ + G+ +
Sbjct: 474 EKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIM 533
Query: 286 MDMYAKCGSIEQALQIFFKAQVKDIYCWNAIISGLALHGH 325
+ K GS+ +A + F+ +D + N + + H
Sbjct: 534 IGGLCKKGSLSEA-DLLFRKMEEDGHSPNGCTYNILIRAH 572
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/337 (20%), Positives = 144/337 (42%), Gaps = 49/337 (14%)
Query: 19 NEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTIK 78
N ++ L G AVL M GF+ + T+ +LK K
Sbjct: 181 NALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKV----------------MCK 224
Query: 79 TGFYRHIFVQTALINMYGTLHCTADACKMFENMPVK-DLVAWNSMLDAYASNGEMEDAIS 137
+G QTAL + + E +K D V ++ ++D +G +++A +
Sbjct: 225 SG-------QTAL---------AMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFN 268
Query: 138 LFHMMPLK----DLSSFNILISGYSSCGE----VLAARSIFDKMAIKDIVSWNSILSACT 189
LF+ M +K D+ + LI G+ G R + + D+V++++++
Sbjct: 269 LFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFV 328
Query: 190 RAGDMEKAFALFQEMPMK----NTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYL 245
+ G + +A L +EM + +T+++ +++ G + Q +A + D M + C P+
Sbjct: 329 KEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIR 388
Query: 246 TATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIF--- 302
T +++ ++ G+++ G+ + L+ + + G +E A ++F
Sbjct: 389 TFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEM 448
Query: 303 FKAQVK-DIYCWNAIISGLALHGHGYAALKLFGYMKK 338
+V+ DI + ++ GL +G AL++F ++K
Sbjct: 449 VSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEK 485
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/324 (21%), Positives = 135/324 (41%), Gaps = 34/324 (10%)
Query: 40 NMQVHGFRADNYTFPILLKAAGKNCASR-----IGFAFHGQTIKTGFYRHIFVQTALINM 94
M++ G + YT I++ NC R + F+ G+ IK G+ + LIN
Sbjct: 97 QMELKGIAHNLYTLSIMI-----NCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLING 151
Query: 95 YGTLHCTADACKMFENM------PVKDLVAWNSMLDAYASNGEMEDAISLFHMMPLKDLS 148
++A ++ + M P L+ N++++ NG++ DA+ L M
Sbjct: 152 LCLEGRVSEALELVDRMVEMGHKPT--LITLNALVNGLCLNGKVSDAVLLIDRMVETGFQ 209
Query: 149 ----SFNILISGYSSCGEVLAARSIFDKMAIK----DIVSWNSILSACTRAGDMEKAFAL 200
++ ++ G+ A + KM + D V ++ I+ + G ++ AF L
Sbjct: 210 PNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNL 269
Query: 201 FQEMPMK----NTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAH 256
F EM +K + I + T++ G G++ + L +M PD + ++++
Sbjct: 270 FNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVK 329
Query: 257 LGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIF----FKAQVKDIYC 312
G L ++H I G++ T+L+D + K +++A + K +I
Sbjct: 330 EGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRT 389
Query: 313 WNAIISGLALHGHGYAALKLFGYM 336
+N +I+G L+LF M
Sbjct: 390 FNILINGYCKANLIDDGLELFRKM 413
>AT1G07740.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:2399117-2400496 REVERSE
Length = 459
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 120/254 (47%), Gaps = 24/254 (9%)
Query: 28 VGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHGQTIKTGFYRHIFV 87
+ + E+A+ + Q GFR D ++ L+ K SR F Q ++ YR++
Sbjct: 59 IEDPEEALSLFHQYQEMGFRHDYPSYSSLIYKLAK---SR-NFDAVDQILRLVRYRNVRC 114
Query: 88 QTAL----INMYGTLHCTADACKMFENMP----VKDLVAWNSMLDAYASNGEMEDAISLF 139
+ +L I YG A +F + V+ + + N++++ NGE+E A S F
Sbjct: 115 RESLFMGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFF 174
Query: 140 ---HMMPLKDLS-SFNILISGYSSCGEVLAARSIFDKM----AIKDIVSWNSILSACTRA 191
M L+ S SFNILI G+ + AA +FD+M +V++NS++ R
Sbjct: 175 DGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRN 234
Query: 192 GDMEKAFALFQEMPMK----NTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTA 247
DM KA +L ++M K N +++ ++ G +G+++EA L +M+ C P +
Sbjct: 235 DDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNY 294
Query: 248 TSVLSACAHLGSLE 261
++S G ++
Sbjct: 295 GILMSDLGKRGRID 308
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 110/249 (44%), Gaps = 34/249 (13%)
Query: 115 DLVAWNSMLDAYASNGEMEDAISLFHMMPLKDL----SSFNILISGYSSCGEVLAARSIF 170
D +++S++ A + + + ++ +++ S F LI Y G V A +F
Sbjct: 80 DYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGLIQHYGKAGSVDKAIDVF 139
Query: 171 DKMA----IKDIVSWNSILSACTRAGDMEKAFALF---QEMPMK-NTISWNTMLAGCLQR 222
K+ ++ I S N++++ G++EKA + F ++M ++ N++S+N ++ G L +
Sbjct: 140 HKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGFLDK 199
Query: 223 GQFSEAVDLFDEMKTTNCLPDYLTATSVLS-ACAH--LGS----LETGIKIHVYAIYSGL 275
+ A +FDEM P +T S++ C + +G LE IK +
Sbjct: 200 CDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRI------- 252
Query: 276 ASSPHVTTALMDMYAKC--GSIEQALQIFFKAQVK----DIYCWNAIISGLALHGHGYAA 329
P+ T + M C G +A ++ F + + + + ++S L G A
Sbjct: 253 --RPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEA 310
Query: 330 LKLFGYMKK 338
L G MKK
Sbjct: 311 KLLLGEMKK 319
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/243 (19%), Positives = 102/243 (41%), Gaps = 20/243 (8%)
Query: 104 ACKMFENMPVKDL----VAWNSMLDAYASNGEMEDAISLFHMMPLKDLS----SFNILIS 155
ACK+F+ M ++ V +NS++ N +M A SL M K + +F +L+
Sbjct: 205 ACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMK 264
Query: 156 GYSSCGEVLAARSIFDKMAIKD----IVSWNSILSACTRAGDMEKAFALFQEMPMK---- 207
G GE A+ + M + +V++ ++S + G +++A L EM +
Sbjct: 265 GLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKP 324
Query: 208 NTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIH 267
+ + +N ++ + EA + EM+ C P+ T ++ + ++G+ +
Sbjct: 325 DVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVL 384
Query: 268 VYAIYSGLASSPHVTTALMDMYAKCGSIEQALQIFFKAQVKDIY----CWNAIISGLALH 323
+ S +P ++ K G+++ A + K++ W ++S L +
Sbjct: 385 NAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVLEVMGKKNLSFGSGAWQNLLSDLCIK 444
Query: 324 GHG 326
G
Sbjct: 445 DGG 447
>AT3G06920.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:2181717-2184449 FORWARD
Length = 871
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 126/269 (46%), Gaps = 20/269 (7%)
Query: 90 ALINMYGTLHCTADACKMFENMPVKDL----VAWNSMLDAYASNGEMEDAISLFHMMPLK 145
+LI+ G + DA K++E M D + + S++ + ++G ED ++ M +
Sbjct: 452 SLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQ 511
Query: 146 DLSSFNILISGYSSC----GEVLAARSIFDKMA----IKDIVSWNSILSACTRAGDMEKA 197
+ S L++ Y C GE R++F+++ + D S++ ++ +AG +
Sbjct: 512 NCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANET 571
Query: 198 FALFQEMPMK----NTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSA 253
+ LF M + +T ++N ++ G + G+ ++A L +EMKT P +T SV+
Sbjct: 572 YELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDG 631
Query: 254 CAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQAL----QIFFKAQVKD 309
A + L+ + A + + + ++L+D + K G I++A ++ K +
Sbjct: 632 LAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPN 691
Query: 310 IYCWNAIISGLALHGHGYAALKLFGYMKK 338
+Y WN+++ L AL F MK+
Sbjct: 692 LYTWNSLLDALVKAEEINEALVCFQSMKE 720
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/303 (21%), Positives = 132/303 (43%), Gaps = 15/303 (4%)
Query: 15 VRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRIGFAFHG 74
V + +I+ G + A+ M+ AD + + + + GK + + F
Sbjct: 203 VHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFH 262
Query: 75 QTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLV----AWNSMLDAYASNG 130
+ G T++I + + +A +MFE++ V A+N+M+ Y S G
Sbjct: 263 EIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAG 322
Query: 131 EMEDAISLFHMMPLK----DLSSFNILISGYSSCGEVLAARSIFDKM---AIKDIVSWNS 183
+ ++A SL K + ++N +++ G+V A +F++M A ++ ++N
Sbjct: 323 KFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNI 382
Query: 184 ILSACTRAGDMEKAFALFQEMP----MKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTN 239
++ RAG ++ AF L M N + N M+ + + EA +F+EM
Sbjct: 383 LIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKV 442
Query: 240 CLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKCGSIEQAL 299
C PD +T S++ +G ++ K++ + S ++ V T+L+ + G E
Sbjct: 443 CTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGH 502
Query: 300 QIF 302
+I+
Sbjct: 503 KIY 505
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 111/248 (44%), Gaps = 16/248 (6%)
Query: 107 MFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMMPLKDLS----SFNILISGYSSCGE 162
M E V D A+N ++D + G++ A L M K ++ +I G +
Sbjct: 578 MKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDR 637
Query: 163 VLAARSIFDKMAIK----DIVSWNSILSACTRAGDMEKAFALFQEMPMK----NTISWNT 214
+ A +F++ K ++V ++S++ + G +++A+ + +E+ K N +WN+
Sbjct: 638 LDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNS 697
Query: 215 MLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSG 274
+L ++ + +EA+ F MK C P+ +T +++ + G
Sbjct: 698 LLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQG 757
Query: 275 LASSPHVTTALMDMYAKCGSIEQALQIF--FKAQ--VKDIYCWNAIISGLALHGHGYAAL 330
+ S T ++ AK G+I +A +F FKA V D C+NA+I GL+ A
Sbjct: 758 MKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAF 817
Query: 331 KLFGYMKK 338
LF ++
Sbjct: 818 SLFEETRR 825
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 124/306 (40%), Gaps = 18/306 (5%)
Query: 9 FMPSLEVRRWNEIIKKHMLVGNAEQAVLTYVNMQVHGFRADNYTFPILLKAAGKNCASRI 68
F+P + R ++ +I + G A + + +M+ G D + I++ K
Sbjct: 548 FVP--DARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNK 605
Query: 69 GFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVK----DLVAWNSMLD 124
+ + GF + ++I+ + +A +FE K ++V ++S++D
Sbjct: 606 AYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLID 665
Query: 125 AYASNGEMEDAISLFHMMPLKDLS----SFNILISGYSSCGEVLAARSIFDKMA----IK 176
+ G +++A + + K L+ ++N L+ E+ A F M
Sbjct: 666 GFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTP 725
Query: 177 DIVSWNSILSACTRAGDMEKAFALFQEMPMK----NTISWNTMLAGCLQRGQFSEAVDLF 232
+ V++ +++ + KAF +QEM + +TIS+ TM++G + G +EA LF
Sbjct: 726 NQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALF 785
Query: 233 DEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIYSGLASSPHVTTALMDMYAKC 292
D K +PD +++ ++ + GL L+D K
Sbjct: 786 DRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKN 845
Query: 293 GSIEQA 298
+EQA
Sbjct: 846 DCLEQA 851
>AT1G51965.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:19312078-19314145 REVERSE
Length = 650
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 130/269 (48%), Gaps = 33/269 (12%)
Query: 20 EIIKKHMLVGNAEQAVLTYVNM----QVHGFRADNYTFPIL------------LKAAGKN 63
EI K++M G V T + + H D ++FP+ L AGK
Sbjct: 364 EISKRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKT 423
Query: 64 C-ASRIGFAFHGQTIKTGFYRHIFVQTALINMYGTLHCTADACKMFENMPVKDLVAWNSM 122
A + H + + T + V +AL + H KM ++ P D+ +N +
Sbjct: 424 IEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNIL 483
Query: 123 LDAYASNGEMEDAISLFHMMPLKD----LSSFNILISGYSSCGEVLAARSIFDKMAIK-- 176
+ ++ GE+++AI++F + D + S+N LI+ G+V A F +M K
Sbjct: 484 IASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGL 543
Query: 177 --DIVSWNSILSACTRAGDMEKAFALFQEMPMK----NTISWNTMLAGCLQR-GQFSEAV 229
D+V++++++ + +E A++LF+EM +K N +++N +L CL++ G+ +EAV
Sbjct: 544 NPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILL-DCLEKNGRTAEAV 602
Query: 230 DLFDEMKTTNCLPDYLTATSV--LSACAH 256
DL+ +MK PD +T T + L + +H
Sbjct: 603 DLYSKMKQQGLTPDSITYTVLERLQSVSH 631
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/326 (21%), Positives = 141/326 (43%), Gaps = 54/326 (16%)
Query: 31 AEQAVLTYVNMQVHGFRADNYTFPILLK---AAGKNCASRIGFAFHGQTIKTGFYRHIFV 87
++A+ + M G R + YT+ +LL A G+ + + G Y +
Sbjct: 321 VDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQGIYSY--- 377
Query: 88 QTALINMYGTLHCTADACKMFENM---PVK-DLVAWNSMLDAYASNGEMEDAISLFHMMP 143
L+ L ++A ++F +M PVK + ++ SML++ G+ +AI +
Sbjct: 378 ---LVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLS--- 431
Query: 144 LKDLSSFNILISGYSSCGEVLAARSIFDKMAIKDIVSWNSILSACTRAGDMEKAFALFQE 203
I +K + D + +N++ SA + + LF++
Sbjct: 432 ------------------------KIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEK 467
Query: 204 M----PMKNTISWNTMLAGCLQRGQFSEAVDLFDEMKTTNCLPDYLTATSVLSACAHLGS 259
M P + ++N ++A + G+ EA+++F+E++ ++C PD ++ S+++ G
Sbjct: 468 MKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGD 527
Query: 260 LETGIKIHV-YAIYSGLASSPHVTT--ALMDMYAKCGSIEQALQIFFKAQVK----DIYC 312
++ HV + +P V T LM+ + K +E A +F + VK +I
Sbjct: 528 VDEA---HVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVT 584
Query: 313 WNAIISGLALHGHGYAALKLFGYMKK 338
+N ++ L +G A+ L+ MK+
Sbjct: 585 YNILLDCLEKNGRTAEAVDLYSKMKQ 610
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 92/193 (47%), Gaps = 14/193 (7%)
Query: 106 KMFENMPVKDLVAWNSMLDAYASNGEMEDAISLFHMM----PLKDLSSFNILISGYSSCG 161
K+ E V D + +N++ A ++ LF M P D+ ++NILI+ + G
Sbjct: 432 KIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVG 491
Query: 162 EVLAARSIFDKMAIKD----IVSWNSILSACTRAGDMEKAFALFQEMPMK----NTISWN 213
EV A +IF+++ D I+S+NS+++ + GD+++A F+EM K + ++++
Sbjct: 492 EVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYS 551
Query: 214 TMLAGCLQRGQFSE-AVDLFDEMKTTNCLPDYLTATSVLSACAHLGSLETGIKIHVYAIY 272
T++ C + + E A LF+EM C P+ +T +L G + ++
Sbjct: 552 TLME-CFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQ 610
Query: 273 SGLASSPHVTTAL 285
GL T L
Sbjct: 611 QGLTPDSITYTVL 623