Jatropha Genome Database

JcCA0312361.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0312361.10 + phase: 0 
         (145 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G26550.1 | Symbols:  | peptidyl-prolyl cis-trans isomerase PP...   214   2e-56
AT2G18040.1 | Symbols: PIN1AT | PIN1AT (PEPTIDYLPROLYL CIS/TRANS...    59   1e-09
AT5G19370.1 | Symbols:  | rhodanese-like domain-containing prote...    50   5e-07

>AT1G26550.1 | Symbols:  | peptidyl-prolyl cis-trans isomerase
           PPIC-type family protein | chr1:9171800-9172716 FORWARD
          Length = 142

 Score =  214 bits (544), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 97/106 (91%), Positives = 104/106 (98%)

Query: 40  LGTCTYVKARHILCEKQGKINEAYQKLQDGWLNNGDKVPPAEFAKLAAEYSECPSGKKGG 99
           LGTCTYVKARH+LCEKQGKINEAY+KLQDGWL+NGDKVPPAEFAK+AAEYSECPSGKKGG
Sbjct: 37  LGTCTYVKARHVLCEKQGKINEAYKKLQDGWLSNGDKVPPAEFAKIAAEYSECPSGKKGG 96

Query: 100 DLGWFPRGKMAGPFQEVAFNTPIGATSAPFKSTHGYHVILCEGRKN 145
           DLGWFPRGKMAGPFQ+VAFNTP+G TSAPFKSTHGYH+IL EGRKN
Sbjct: 97  DLGWFPRGKMAGPFQDVAFNTPVGVTSAPFKSTHGYHIILSEGRKN 142


>AT2G18040.1 | Symbols: PIN1AT | PIN1AT (PEPTIDYLPROLYL CIS/TRANS
           ISOMERASE, NIMA-INTERACTING 1); peptidyl-prolyl
           cis-trans isomerase | chr2:7842346-7843537 FORWARD
          Length = 119

 Score = 58.9 bits (141), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/115 (32%), Positives = 53/115 (46%), Gaps = 16/115 (13%)

Query: 40  LGTCTYVKARHILCEKQGKINEAYQKLQDGWLN---------------NGDKVP-PAEFA 83
           + +   VKA HIL + QG   +A  K  +G +                  D V   A F 
Sbjct: 1   MASRDQVKASHILIKHQGSRRKASWKDPEGKIILTTTREAAVEQLKSIREDIVSGKANFE 60

Query: 84  KLAAEYSECPSGKKGGDLGWFPRGKMAGPFQEVAFNTPIGATSAPFKSTHGYHVI 138
           ++A   S+C S K+GGDLG F RG+M  PF+E  +   +G  S    +  G H+I
Sbjct: 61  EVATRVSDCSSAKRGGDLGSFGRGQMQKPFEEATYALKVGDISDIVDTDSGVHII 115


>AT5G19370.1 | Symbols:  | rhodanese-like domain-containing protein
           / PPIC-type PPIASE domain-containing protein |
           chr5:6524247-6526629 REVERSE
          Length = 299

 Score = 50.1 bits (118), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 9/93 (9%)

Query: 46  VKARHILCEKQGKINEAYQKLQDGWLNNGDKVPPAEFAKLAAEYSECPSGKKGGDLGWFP 105
           +  +H+L +      E + +LQ  +L+        E + LAAEYS CPS K GG LGW  
Sbjct: 96  ILVQHLLVKNNDV--ELFAELQKKFLDG------EEMSDLAAEYSICPSKKDGGILGWVK 147

Query: 106 RGKMAGPFQEVAFNTPIGATSAPFKSTHGYHVI 138
            G+M   F+E AF   +       ++  G H++
Sbjct: 148 LGQMVPEFEEAAFKAELNQV-VRCRTQFGLHLL 179