Jatropha Genome Database

JcCA0311651.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0311651.10 + phase: 0 
         (485 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G12200.1 | Symbols:  | dihydropyrimidinase / DHPase / dihydro...   771   0.0  
AT4G04955.1 | Symbols: ATALN | ATALN (Arabidopsis allantoinase);...    75   1e-13

>AT5G12200.1 | Symbols:  | dihydropyrimidinase / DHPase /
           dihydropyrimidine amidohydrolase / hydantoinase (PYD2) |
           chr5:3941700-3944727 REVERSE
          Length = 531

 Score =  771 bits (1990), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 365/451 (80%), Positives = 403/451 (89%), Gaps = 9/451 (1%)

Query: 28  NQFCEVRSGYDEAGCGIPXXXXXXXXXXXXXTVVNAHQQEVADVFVEDGIIVVVKPNIKV 87
            QFC          CG+              TVVNAH QE+ADV+VE+GIIV V+PNIKV
Sbjct: 26  TQFCSAGRENGVGSCGV----SSTRILIKGGTVVNAHHQELADVYVENGIIVAVQPNIKV 81

Query: 88  GDDVYVIDASGKFVMPGGIDPHTHLAMEFMSTETIDDFFSGQAAALAGGTTMHIDFVIPL 147
           GD+V V+DA+GKFVMPGGIDPHTHLAMEFM TETIDDFFSGQAAALAGGTTMHIDFVIP+
Sbjct: 82  GDEVTVLDATGKFVMPGGIDPHTHLAMEFMGTETIDDFFSGQAAALAGGTTMHIDFVIPV 141

Query: 148 NGSLVAGFEAYKKKAKKSCMDYGFHMAVTKWDEVVSREMEIMVKENGINSFKFFMAYKGS 207
           NG+LVAGFEAY+ K+++SCMDYGFHMA+TKWDE VSR+ME++VKE GINSFKFF+AYKGS
Sbjct: 142 NGNLVAGFEAYENKSRESCMDYGFHMAITKWDEGVSRDMEMLVKEKGINSFKFFLAYKGS 201

Query: 208 LMINDDLLLEGLKQCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPVLVV 267
           LM+ DDLLLEGLK+CKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPVL  
Sbjct: 202 LMVTDDLLLEGLKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPVL-- 259

Query: 268 LQLEGEATARAIRLASFINTPLYVVHVMSIDAMEEIARARKSGQRVIGEPVVSGLVLDDS 327
              EGEATARAIRLA FINTPLYVVHVMS+DAM+EIA+ARKSGQ+VIGEPVVSGL+LDD 
Sbjct: 260 ---EGEATARAIRLARFINTPLYVVHVMSVDAMDEIAKARKSGQKVIGEPVVSGLILDDH 316

Query: 328 KLWDPDFTTASKYVMSPPIRPSGHDKALQAALSTGVLQLVGTDHCVFNSTQKAFGIDDFR 387
            LWDPDFT ASKYVMSPPIRP GH KALQ ALSTG+LQLVGTDHC FNSTQKA G+DDFR
Sbjct: 317 WLWDPDFTIASKYVMSPPIRPVGHGKALQDALSTGILQLVGTDHCTFNSTQKALGLDDFR 376

Query: 388 KIPNGVNGIEERMHLLWDTMVESGQISVTDFVRVTSTECARIFNIYPRKGAILAGSDADI 447
           +IPNGVNG+EERMHL+WDTMVESGQ+S TD+VR+TSTECARIFNIYPRKGAILAGSDADI
Sbjct: 377 RIPNGVNGLEERMHLIWDTMVESGQLSATDYVRITSTECARIFNIYPRKGAILAGSDADI 436

Query: 448 IILNPNSSFEISARSHHSRTDTNVYEGRRGK 478
           IILNPNSS+EIS++SHHSR+DTNVYEGRRGK
Sbjct: 437 IILNPNSSYEISSKSHHSRSDTNVYEGRRGK 467


>AT4G04955.1 | Symbols: ATALN | ATALN (Arabidopsis allantoinase);
           allantoinase/ hydrolase | chr4:2522301-2525259 REVERSE
          Length = 506

 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 110/439 (25%), Positives = 180/439 (41%), Gaps = 52/439 (11%)

Query: 71  VFVEDGIIVVVKPNIKVGDD----VYVIDASGKFVMPGGIDPHTHLAMEFMSTETIDDFF 126
           V V+ GIIV V   +         V VID     +MPG ID H HL  +       + F 
Sbjct: 63  VEVKGGIIVSVVKEVDWHKSQRSRVKVIDYGEAVLMPGLIDVHVHL--DDPGRSEWEGFP 120

Query: 127 SGQAAALAGGTTMHIDFVIPLNG--------SLVAGFEAYKKKAKKSCMDYGFHMAVTKW 178
           SG  AA AGG T  +D  +PLN         +L    EA K +     +D GF   +   
Sbjct: 121 SGTKAAAAGGITTLVD--MPLNSFPSTVSPETLKLKIEAAKNRIH---VDVGFWGGLVPD 175

Query: 179 DEVVSREMEIMVKENGINSFKFFMAYKG---SLMINDDLLLEGLKQCKSLGALAMVHAEN 235
           + + S  +E ++ + G+   K FM   G     M N   + EGL          +VHAE 
Sbjct: 176 NALNSSALESLL-DAGVLGLKSFMCPSGINDFPMTNITHIKEGLSVLAKYKRPLLVHAE- 233

Query: 236 GDAVFEGQKRMIELGITGPEGHALSRPPVLVVLQLEGEATARAIRLASFINTP------- 288
                   +R +E+   G E    S    L       E  A    L+   NT        
Sbjct: 234 -------IERDLEIE-DGSENDPRSYLTYLKTRPTSWEEGAIRNLLSVTENTRIGGSAEG 285

Query: 289 --LYVVHVM-SIDAMEEIARARKSGQRVIGEPVVSGLVLDDSKLWDPDFTTASKYVMSPP 345
             L++VH+  +  +++ I  A+  G  V  E     L     ++ + D    +++  SPP
Sbjct: 286 AHLHIVHLSDASSSLDLIKEAKGKGDSVTVETCPHYLAFSAEEIPEGD----TRFKCSPP 341

Query: 346 IRPSGHDKALQAALSTGVLQLVGTDHCVFNSTQKAFGIDDFRKIPNGVNGIEERMHLLWD 405
           IR + + + L  AL  G + ++ +DH       K     +F K   G++ ++  + + W 
Sbjct: 342 IRDAANREKLWEALMEGDIDMLSSDHSPTKPELKLMSDGNFLKAWGGISSLQFVLPITWS 401

Query: 406 TMVESGQISVTDFVRVTSTECARIFNIYPRKGAILAGSDADIIILNPNSSFEISARS--H 463
              + G +++       S   +++  ++  KGA+  G  AD+++  P + F++      H
Sbjct: 402 YGKKYG-VTLEQVTSWWSDRPSKLAGLH-SKGAVTVGKHADLVVWEPEAEFDVDEDHPIH 459

Query: 464 HSRTDTNVYEGRR--GKVI 480
                 + Y GRR  GKV+
Sbjct: 460 FKHPSISAYLGRRLSGKVV 478