Jatropha Genome Database
- JcCA0311331.20
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0311331.20 - phase: 0
(181 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G36800.2 | Symbols: RCE1 | RCE1 (RUB1 CONJUGATING ENZYME 1); ... 309 6e-85
AT4G36800.1 | Symbols: RCE1 | RCE1 (RUB1 CONJUGATING ENZYME 1); ... 309 6e-85
AT2G18600.1 | Symbols: | RUB1-conjugating enzyme, putative | ch... 300 4e-82
AT1G78870.2 | Symbols: UBC35, UBC13A | UBC35 (UBIQUITIN-CONJUGAT... 93 1e-19
AT3G08690.1 | Symbols: UBC11, ATUBC11 | UBC11 (UBIQUITIN-CONJUGA... 92 1e-19
AT1G16890.2 | Symbols: UBC36, UBC13B | ubiquitin-conjugating enz... 92 2e-19
AT5G53300.2 | Symbols: UBC10 | UBC10 (ubiquitin-conjugating enzy... 92 2e-19
AT5G53300.1 | Symbols: UBC10 | UBC10 (ubiquitin-conjugating enzy... 92 2e-19
AT5G41700.4 | Symbols: UBC8, ATUBC8 | UBC8 (UBIQUITIN CONJUGATIN... 91 4e-19
AT4G27960.1 | Symbols: UBC9 | UBC9 (UBIQUITIN CONJUGATING ENZYME... 90 7e-19
AT5G41700.1 | Symbols: UBC8, ATUBC8 | UBC8 (UBIQUITIN CONJUGATIN... 90 8e-19
AT5G41700.2 | Symbols: UBC8, ATUBC8 | UBC8 (UBIQUITIN CONJUGATIN... 90 8e-19
AT5G56150.2 | Symbols: UBC30 | UBC30 (ubiquitin-conjugating enzy... 90 8e-19
AT5G56150.1 | Symbols: UBC30 | UBC30 (ubiquitin-conjugating enzy... 90 8e-19
AT1G64230.2 | Symbols: UBC28 | ubiquitin-conjugating enzyme, put... 89 1e-18
AT1G64230.1 | Symbols: UBC28 | ubiquitin-conjugating enzyme, put... 89 1e-18
AT2G16740.1 | Symbols: UBC29 | UBC29 (ubiquitin-conjugating enzy... 89 1e-18
AT4G27960.2 | Symbols: UBC9 | UBC9 (UBIQUITIN CONJUGATING ENZYME... 89 1e-18
AT1G16890.1 | Symbols: UBC36, UBC13B | ubiquitin-conjugating enz... 89 2e-18
AT1G64230.3 | Symbols: UBC28 | ubiquitin-conjugating enzyme, put... 88 2e-18
AT1G78870.1 | Symbols: UBC35, UBC13A | UBC35 (UBIQUITIN-CONJUGAT... 88 2e-18
AT1G64230.4 | Symbols: UBC28 | ubiquitin-conjugating enzyme, put... 87 6e-18
AT2G02760.1 | Symbols: ATUBC2, UBC2 | ATUBC2 (UBIQUITING-CONJUGA... 86 2e-17
AT1G63800.1 | Symbols: UBC5 | UBC5 (ubiquitin-conjugating enzyme... 85 3e-17
AT5G41340.1 | Symbols: UBC4, ATUBC4 | UBC4 (UBIQUITIN CONJUGATIN... 84 4e-17
AT1G14400.2 | Symbols: UBC1, ATUBC1 | UBC1 (UBIQUITIN CARRIER PR... 84 4e-17
AT1G14400.1 | Symbols: UBC1, ATUBC1 | UBC1 (UBIQUITIN CARRIER PR... 84 4e-17
AT3G08700.1 | Symbols: UBC12 | UBC12 (ubiquitin-conjugating enzy... 84 5e-17
AT5G25760.2 | Symbols: PEX4 | PEX4 (PEROXIN4); protein binding /... 83 1e-16
AT5G25760.1 | Symbols: PEX4, UBC21 | PEX4 (PEROXIN4); protein bi... 83 1e-16
AT3G24515.1 | Symbols: UBC37 | UBC37 (ubiquitin-conjugating enzy... 80 7e-16
AT5G50870.1 | Symbols: UBC27 | UBC27 (ubiquitin-conjugating enzy... 79 1e-15
AT2G46030.1 | Symbols: UBC6 | UBC6 (ubiquitin-conjugating enzyme... 79 2e-15
AT1G78870.3 | Symbols: UBC35, UBC13A | UBC35 (UBIQUITIN-CONJUGAT... 78 3e-15
AT1G36340.1 | Symbols: UBC31 | UBC31 (ubiquitin-conjugating enzy... 76 9e-15
AT5G62540.1 | Symbols: UBC3 | UBC3 (ubiquitin-conjugating enzyme... 76 1e-14
AT3G20060.1 | Symbols: UBC19 | UBC19 (ubiquitin-conjugating enzy... 74 4e-14
AT3G13550.1 | Symbols: FUS9, EMB144, COP10, CIN4 | FUS9 (FUSCA 9... 74 6e-14
AT5G53300.3 | Symbols: | UBC10 (ubiquitin-conjugating enzyme 10... 74 6e-14
AT3G20060.2 | Symbols: UBC19 | UBC19 (ubiquitin-conjugating enzy... 74 7e-14
AT3G13550.2 | Symbols: FUS9, EMB144, COP10, CIN4 | FUS9 (FUSCA 9... 72 1e-13
AT1G50490.1 | Symbols: UBC20 | UBC20 (ubiquitin-conjugating enzy... 72 2e-13
AT5G41700.3 | Symbols: UBC8, ATUBC8 | UBC8 (UBIQUITIN CONJUGATIN... 71 4e-13
AT5G05080.2 | Symbols: UBC22 | UBC22 (ubiquitin-conjugating enzy... 69 2e-12
AT5G05080.1 | Symbols: UBC22 | UBC22 (ubiquitin-conjugating enzy... 69 2e-12
AT3G57870.1 | Symbols: AHUS5, EMB1637, SCE1, SCE1A, ATSCE1 | SCE... 69 2e-12
AT3G55380.1 | Symbols: UBC14 | UBC14 (ubiquitin-conjugating enzy... 67 4e-12
AT5G59300.1 | Symbols: UBC7, ATUBC7 | UBC7 (UBIQUITIN CARRIER PR... 66 1e-11
AT3G46460.1 | Symbols: UBC13 | UBC13 (ubiquitin-conjugating enzy... 65 2e-11
AT1G45050.1 | Symbols: ATUBC2-1, UBC15 | ATUBC2-1; ubiquitin-pro... 56 1e-08
AT4G36410.1 | Symbols: UBC17 | UBC17 (UBIQUITIN-CONJUGATING ENZY... 53 1e-07
AT5G42990.1 | Symbols: UBC18 | UBC18 (ubiquitin-conjugating enzy... 51 5e-07
AT1G75440.1 | Symbols: UBC16 | UBC16 (ubiquitin-conjugating enzy... 50 7e-07
AT2G32790.1 | Symbols: | ubiquitin-conjugating enzyme, putative... 47 7e-06
>AT4G36800.2 | Symbols: RCE1 | RCE1 (RUB1 CONJUGATING ENZYME 1);
NEDD8 ligase/ small conjugating protein ligase |
chr4:17341237-17342148 REVERSE
Length = 184
Score = 309 bits (792), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 144/184 (78%), Positives = 164/184 (89%), Gaps = 3/184 (1%)
Query: 1 MIRLFKVKEKQKEISDN---GKAPVKKQSAGELRLHKDISELNLPKSCTISFTNGKDDLM 57
MI LFKVKEKQ+E + N G A VKKQSAGELRLHKDISELNLP SC+ISF NGKDDLM
Sbjct: 1 MIGLFKVKEKQREQAQNATRGGASVKKQSAGELRLHKDISELNLPSSCSISFPNGKDDLM 60
Query: 58 NFVVTVKPDEGYYKNGNFQFSFQVPDVYPHEAPKVKCQTKVYHPNIDLEGNVCLNILRED 117
NF V++KPD+GYY NG F F+FQV VYPHEAPKVKC+TKVYHPNIDLEGNVCLNILRED
Sbjct: 61 NFEVSIKPDDGYYHNGTFVFTFQVSPVYPHEAPKVKCKTKVYHPNIDLEGNVCLNILRED 120
Query: 118 WKPVLNINTIIYGLFHLFTQPNREDPLNSDAAAMLRDNPRLFESNVKKAMAGGFIGKTYF 177
WKPVLNINT+IYGLFHLFT+PN EDPLN DAAA+LRDNP+LFE+NV++AM GG++G+T+F
Sbjct: 121 WKPVLNINTVIYGLFHLFTEPNSEDPLNHDAAAVLRDNPKLFETNVRRAMTGGYVGQTFF 180
Query: 178 ARCL 181
RC+
Sbjct: 181 PRCI 184
>AT4G36800.1 | Symbols: RCE1 | RCE1 (RUB1 CONJUGATING ENZYME 1);
NEDD8 ligase/ small conjugating protein ligase |
chr4:17341237-17342148 REVERSE
Length = 184
Score = 309 bits (792), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 144/184 (78%), Positives = 164/184 (89%), Gaps = 3/184 (1%)
Query: 1 MIRLFKVKEKQKEISDN---GKAPVKKQSAGELRLHKDISELNLPKSCTISFTNGKDDLM 57
MI LFKVKEKQ+E + N G A VKKQSAGELRLHKDISELNLP SC+ISF NGKDDLM
Sbjct: 1 MIGLFKVKEKQREQAQNATRGGASVKKQSAGELRLHKDISELNLPSSCSISFPNGKDDLM 60
Query: 58 NFVVTVKPDEGYYKNGNFQFSFQVPDVYPHEAPKVKCQTKVYHPNIDLEGNVCLNILRED 117
NF V++KPD+GYY NG F F+FQV VYPHEAPKVKC+TKVYHPNIDLEGNVCLNILRED
Sbjct: 61 NFEVSIKPDDGYYHNGTFVFTFQVSPVYPHEAPKVKCKTKVYHPNIDLEGNVCLNILRED 120
Query: 118 WKPVLNINTIIYGLFHLFTQPNREDPLNSDAAAMLRDNPRLFESNVKKAMAGGFIGKTYF 177
WKPVLNINT+IYGLFHLFT+PN EDPLN DAAA+LRDNP+LFE+NV++AM GG++G+T+F
Sbjct: 121 WKPVLNINTVIYGLFHLFTEPNSEDPLNHDAAAVLRDNPKLFETNVRRAMTGGYVGQTFF 180
Query: 178 ARCL 181
RC+
Sbjct: 181 PRCI 184
>AT2G18600.1 | Symbols: | RUB1-conjugating enzyme, putative |
chr2:8073337-8074565 REVERSE
Length = 185
Score = 300 bits (767), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 143/185 (77%), Positives = 162/185 (87%), Gaps = 4/185 (2%)
Query: 1 MIRLFKVKEKQKEISDN----GKAPVKKQSAGELRLHKDISELNLPKSCTISFTNGKDDL 56
MI LFKVKEKQ+E S + G + VKKQSAGELRLHKDISELNLPKSC ISF NGK+DL
Sbjct: 1 MIGLFKVKEKQREESQSNNGRGASTVKKQSAGELRLHKDISELNLPKSCKISFPNGKNDL 60
Query: 57 MNFVVTVKPDEGYYKNGNFQFSFQVPDVYPHEAPKVKCQTKVYHPNIDLEGNVCLNILRE 116
MNF VT+KPDEGYY +GNF FSFQV ++YPHEAPKVKC+TKVYHPNIDLEGNVCLNILRE
Sbjct: 61 MNFEVTIKPDEGYYLSGNFVFSFQVSNMYPHEAPKVKCKTKVYHPNIDLEGNVCLNILRE 120
Query: 117 DWKPVLNINTIIYGLFHLFTQPNREDPLNSDAAAMLRDNPRLFESNVKKAMAGGFIGKTY 176
DWKPVLNINT+IYGLFHLFT+PN EDPLN +AAA+LRDNP+ FE NV++AM GG +G+T
Sbjct: 121 DWKPVLNINTVIYGLFHLFTEPNYEDPLNHEAAAVLRDNPKTFEYNVRRAMMGGQVGQTS 180
Query: 177 FARCL 181
F RC+
Sbjct: 181 FPRCM 185
>AT1G78870.2 | Symbols: UBC35, UBC13A | UBC35 (UBIQUITIN-CONJUGATING
ENZYME 35); protein binding / ubiquitin-protein ligase |
chr1:29650589-29652203 FORWARD
Length = 153
Score = 92.8 bits (229), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 73/126 (57%), Gaps = 1/126 (0%)
Query: 31 RLHKDISELNLPKSCTISFTNGKDDLMNF-VVTVKPDEGYYKNGNFQFSFQVPDVYPHEA 89
R+ K+ L + IS + +D++ F V+ + P + Y+ G F+ +P+ YP A
Sbjct: 9 RIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAA 68
Query: 90 PKVKCQTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNREDPLNSDAA 149
PKV+ TK+YHPNID G +CL+IL++ W P L I T++ + L + PN +DPL+ + A
Sbjct: 69 PKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIA 128
Query: 150 AMLRDN 155
+ N
Sbjct: 129 KHWKSN 134
>AT3G08690.1 | Symbols: UBC11, ATUBC11 | UBC11
(UBIQUITIN-CONJUGATING ENZYME 11); ubiquitin-protein
ligase | chr3:2641487-2642489 FORWARD
Length = 148
Score = 92.4 bits (228), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 73/135 (54%), Gaps = 1/135 (0%)
Query: 31 RLHKDISELNLPKSCTISFTNGKDDLMNFVVTVK-PDEGYYKNGNFQFSFQVPDVYPHEA 89
R+ K++ +L S +D+ ++ T+ P E Y G F S P YP +
Sbjct: 5 RILKELKDLQKDPPSNCSAGPVAEDMFHWQATIMGPPESPYAGGVFLVSIHFPPDYPFKP 64
Query: 90 PKVKCQTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNREDPLNSDAA 149
PKV +TKVYHPNI+ G++CL+IL+E W P L I+ ++ + L T PN +DPL + A
Sbjct: 65 PKVSFKTKVYHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIA 124
Query: 150 AMLRDNPRLFESNVK 164
M + + +ES +
Sbjct: 125 HMYKTDRSKYESTAR 139
>AT1G16890.2 | Symbols: UBC36, UBC13B | ubiquitin-conjugating
enzyme, putative | chr1:5776550-5778327 REVERSE
Length = 153
Score = 91.7 bits (226), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 73/126 (57%), Gaps = 1/126 (0%)
Query: 31 RLHKDISELNLPKSCTISFTNGKDDLMNF-VVTVKPDEGYYKNGNFQFSFQVPDVYPHEA 89
R+ K+ L + IS + ++++ F V+ + P + Y+ G F+ +P+ YP A
Sbjct: 9 RIIKETQRLLSEPAPGISASPSEENMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAA 68
Query: 90 PKVKCQTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNREDPLNSDAA 149
PKV+ TK+YHPNID G +CL+IL++ W P L I T++ + L + PN +DPL+ + A
Sbjct: 69 PKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIA 128
Query: 150 AMLRDN 155
+ N
Sbjct: 129 KHWKSN 134
>AT5G53300.2 | Symbols: UBC10 | UBC10 (ubiquitin-conjugating enzyme
10); ubiquitin-protein ligase | chr5:21632802-21633989
REVERSE
Length = 148
Score = 91.7 bits (226), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 77/137 (56%), Gaps = 5/137 (3%)
Query: 31 RLHKDISEL--NLPKSCTISFTNGKDDLMNFVVTVK-PDEGYYKNGNFQFSFQVPDVYPH 87
R+ K++ +L + P SC+ +D+ ++ T+ P E Y G F + P YP
Sbjct: 5 RILKELKDLQKDPPTSCSAGPV--AEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDYPF 62
Query: 88 EAPKVKCQTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNREDPLNSD 147
+ PKV +TKV+HPNI+ G++CL+IL+E W P L I+ ++ + L T PN +DPL +
Sbjct: 63 KPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPE 122
Query: 148 AAAMLRDNPRLFESNVK 164
A M + + +ES +
Sbjct: 123 IAHMYKTDKNKYESTAR 139
>AT5G53300.1 | Symbols: UBC10 | UBC10 (ubiquitin-conjugating enzyme
10); ubiquitin-protein ligase | chr5:21632802-21633989
REVERSE
Length = 148
Score = 91.7 bits (226), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 77/137 (56%), Gaps = 5/137 (3%)
Query: 31 RLHKDISEL--NLPKSCTISFTNGKDDLMNFVVTVK-PDEGYYKNGNFQFSFQVPDVYPH 87
R+ K++ +L + P SC+ +D+ ++ T+ P E Y G F + P YP
Sbjct: 5 RILKELKDLQKDPPTSCSAGPV--AEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDYPF 62
Query: 88 EAPKVKCQTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNREDPLNSD 147
+ PKV +TKV+HPNI+ G++CL+IL+E W P L I+ ++ + L T PN +DPL +
Sbjct: 63 KPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPE 122
Query: 148 AAAMLRDNPRLFESNVK 164
A M + + +ES +
Sbjct: 123 IAHMYKTDKNKYESTAR 139
>AT5G41700.4 | Symbols: UBC8, ATUBC8 | UBC8 (UBIQUITIN CONJUGATING
ENZYME 8); protein binding / ubiquitin-protein ligase |
chr5:16676072-16677223 FORWARD
Length = 149
Score = 90.9 bits (224), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 73/136 (53%), Gaps = 2/136 (1%)
Query: 31 RLHKDISEL--NLPKSCTISFTNGKDDLMNFVVTVKPDEGYYKNGNFQFSFQVPDVYPHE 88
R+ K++ +L + P SC + +D + P E Y G F + P YP +
Sbjct: 5 RILKELKDLQKDPPTSCIFAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDYPFK 64
Query: 89 APKVKCQTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNREDPLNSDA 148
PKV +TKV+HPNI+ G++CL+IL+E W P L I+ ++ + L T PN +DPL +
Sbjct: 65 PPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEI 124
Query: 149 AAMLRDNPRLFESNVK 164
A M + + +E+ +
Sbjct: 125 AHMYKTDRAKYEATAR 140
>AT4G27960.1 | Symbols: UBC9 | UBC9 (UBIQUITIN CONJUGATING ENZYME
9); ubiquitin-protein ligase | chr4:13916065-13917203
REVERSE
Length = 148
Score = 90.1 bits (222), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 77/137 (56%), Gaps = 5/137 (3%)
Query: 31 RLHKDISEL--NLPKSCTISFTNGKDDLMNFVVTVK-PDEGYYKNGNFQFSFQVPDVYPH 87
R+ K++ +L + P SC+ +D+ ++ T+ P + Y G F + P YP
Sbjct: 5 RILKELKDLQKDPPTSCSAGPV--AEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPF 62
Query: 88 EAPKVKCQTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNREDPLNSD 147
+ PKV +TKV+HPNI+ G++CL+IL+E W P L I+ ++ + L T PN +DPL +
Sbjct: 63 KPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPE 122
Query: 148 AAAMLRDNPRLFESNVK 164
A M + + +ES +
Sbjct: 123 IAHMYKTDKNKYESTAR 139
>AT5G41700.1 | Symbols: UBC8, ATUBC8 | UBC8 (UBIQUITIN CONJUGATING
ENZYME 8); protein binding / ubiquitin-protein ligase |
chr5:16676072-16677223 FORWARD
Length = 148
Score = 89.7 bits (221), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 77/137 (56%), Gaps = 5/137 (3%)
Query: 31 RLHKDISEL--NLPKSCTISFTNGKDDLMNFVVTVK-PDEGYYKNGNFQFSFQVPDVYPH 87
R+ K++ +L + P SC+ +D+ ++ T+ P E Y G F + P YP
Sbjct: 5 RILKELKDLQKDPPTSCSAGPV--AEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDYPF 62
Query: 88 EAPKVKCQTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNREDPLNSD 147
+ PKV +TKV+HPNI+ G++CL+IL+E W P L I+ ++ + L T PN +DPL +
Sbjct: 63 KPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPE 122
Query: 148 AAAMLRDNPRLFESNVK 164
A M + + +E+ +
Sbjct: 123 IAHMYKTDRAKYEATAR 139
>AT5G41700.2 | Symbols: UBC8, ATUBC8 | UBC8 (UBIQUITIN CONJUGATING
ENZYME 8); protein binding / ubiquitin-protein ligase |
chr5:16676072-16677223 FORWARD
Length = 148
Score = 89.7 bits (221), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 77/137 (56%), Gaps = 5/137 (3%)
Query: 31 RLHKDISEL--NLPKSCTISFTNGKDDLMNFVVTVK-PDEGYYKNGNFQFSFQVPDVYPH 87
R+ K++ +L + P SC+ +D+ ++ T+ P E Y G F + P YP
Sbjct: 5 RILKELKDLQKDPPTSCSAGPV--AEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDYPF 62
Query: 88 EAPKVKCQTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNREDPLNSD 147
+ PKV +TKV+HPNI+ G++CL+IL+E W P L I+ ++ + L T PN +DPL +
Sbjct: 63 KPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPE 122
Query: 148 AAAMLRDNPRLFESNVK 164
A M + + +E+ +
Sbjct: 123 IAHMYKTDRAKYEATAR 139
>AT5G56150.2 | Symbols: UBC30 | UBC30 (ubiquitin-conjugating enzyme
30); ubiquitin-protein ligase | chr5:22729756-22730964
FORWARD
Length = 148
Score = 89.7 bits (221), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 78/137 (56%), Gaps = 5/137 (3%)
Query: 31 RLHKDISEL--NLPKSCTISFTNGKDDLMNFVVTVK-PDEGYYKNGNFQFSFQVPDVYPH 87
R++K++ +L + P SC+ T DD+ + T+ P + + G F + P YP
Sbjct: 5 RINKELRDLQRDPPVSCSAGPTG--DDMFQWQATIMGPADSPFAGGVFLVTIHFPPDYPF 62
Query: 88 EAPKVKCQTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNREDPLNSD 147
+ PKV +TKVYHPNI+ G++CL+IL+E W P L ++ ++ + L T PN +DPL +
Sbjct: 63 KPPKVAFRTKVYHPNINSNGSICLDILKEQWSPALTVSKVLLSICSLLTDPNPDDPLVPE 122
Query: 148 AAAMLRDNPRLFESNVK 164
A + + + +ES +
Sbjct: 123 IAHIYKTDRVKYESTAQ 139
>AT5G56150.1 | Symbols: UBC30 | UBC30 (ubiquitin-conjugating enzyme
30); ubiquitin-protein ligase | chr5:22729756-22730964
FORWARD
Length = 148
Score = 89.7 bits (221), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 78/137 (56%), Gaps = 5/137 (3%)
Query: 31 RLHKDISEL--NLPKSCTISFTNGKDDLMNFVVTVK-PDEGYYKNGNFQFSFQVPDVYPH 87
R++K++ +L + P SC+ T DD+ + T+ P + + G F + P YP
Sbjct: 5 RINKELRDLQRDPPVSCSAGPTG--DDMFQWQATIMGPADSPFAGGVFLVTIHFPPDYPF 62
Query: 88 EAPKVKCQTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNREDPLNSD 147
+ PKV +TKVYHPNI+ G++CL+IL+E W P L ++ ++ + L T PN +DPL +
Sbjct: 63 KPPKVAFRTKVYHPNINSNGSICLDILKEQWSPALTVSKVLLSICSLLTDPNPDDPLVPE 122
Query: 148 AAAMLRDNPRLFESNVK 164
A + + + +ES +
Sbjct: 123 IAHIYKTDRVKYESTAQ 139
>AT1G64230.2 | Symbols: UBC28 | ubiquitin-conjugating enzyme,
putative | chr1:23833792-23835220 FORWARD
Length = 148
Score = 89.4 bits (220), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 77/137 (56%), Gaps = 5/137 (3%)
Query: 31 RLHKDISEL--NLPKSCTISFTNGKDDLMNFVVTVK-PDEGYYKNGNFQFSFQVPDVYPH 87
R+ K++ +L + P SC+ +D+ ++ T+ P + Y G F + P YP
Sbjct: 5 RILKELKDLQKDPPTSCSAGPV--AEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPF 62
Query: 88 EAPKVKCQTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNREDPLNSD 147
+ PKV +TKV+HPN++ G++CL+IL+E W P L I+ ++ + L T PN +DPL +
Sbjct: 63 KPPKVAFRTKVFHPNVNSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPE 122
Query: 148 AAAMLRDNPRLFESNVK 164
A M + + +ES +
Sbjct: 123 IAHMYKTDRAKYESTAR 139
>AT1G64230.1 | Symbols: UBC28 | ubiquitin-conjugating enzyme,
putative | chr1:23833792-23835220 FORWARD
Length = 148
Score = 89.4 bits (220), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 77/137 (56%), Gaps = 5/137 (3%)
Query: 31 RLHKDISEL--NLPKSCTISFTNGKDDLMNFVVTVK-PDEGYYKNGNFQFSFQVPDVYPH 87
R+ K++ +L + P SC+ +D+ ++ T+ P + Y G F + P YP
Sbjct: 5 RILKELKDLQKDPPTSCSAGPV--AEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPF 62
Query: 88 EAPKVKCQTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNREDPLNSD 147
+ PKV +TKV+HPN++ G++CL+IL+E W P L I+ ++ + L T PN +DPL +
Sbjct: 63 KPPKVAFRTKVFHPNVNSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPE 122
Query: 148 AAAMLRDNPRLFESNVK 164
A M + + +ES +
Sbjct: 123 IAHMYKTDRAKYESTAR 139
>AT2G16740.1 | Symbols: UBC29 | UBC29 (ubiquitin-conjugating enzyme
29); ubiquitin-protein ligase | chr2:7267880-7268737
FORWARD
Length = 148
Score = 89.4 bits (220), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 82/147 (55%), Gaps = 10/147 (6%)
Query: 31 RLHKDISEL--NLPKSCTISFTNGKDDLMNFVVTVK-PDEGYYKNGNFQFSFQVPDVYPH 87
R+ K++ EL + P SC+ T +D+ ++ T+ P+E Y G F + P YP
Sbjct: 5 RILKELKELQRDPPVSCSAGPTG--EDMFHWQATIMGPNESPYSGGVFLVNIHFPPDYPF 62
Query: 88 EAPKVKCQTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNREDPLNSD 147
+ PKV +TKV+HPNI+ GN+CL+IL++ W P L I+ ++ + L T PN +DPL +
Sbjct: 63 KPPKVVFRTKVFHPNINSNGNICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPE 122
Query: 148 AAAMLRDNPRLFESNVKKAMAGGFIGK 174
A + + + +E AMA + K
Sbjct: 123 IAHIYKTDKTKYE-----AMARSWTQK 144
>AT4G27960.2 | Symbols: UBC9 | UBC9 (UBIQUITIN CONJUGATING ENZYME
9); ubiquitin-protein ligase | chr4:13916065-13917293
REVERSE
Length = 178
Score = 89.0 bits (219), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 77/137 (56%), Gaps = 5/137 (3%)
Query: 31 RLHKDISEL--NLPKSCTISFTNGKDDLMNFVVTVK-PDEGYYKNGNFQFSFQVPDVYPH 87
R+ K++ +L + P SC+ +D+ ++ T+ P + Y G F + P YP
Sbjct: 35 RILKELKDLQKDPPTSCSAGPV--AEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPF 92
Query: 88 EAPKVKCQTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNREDPLNSD 147
+ PKV +TKV+HPNI+ G++CL+IL+E W P L I+ ++ + L T PN +DPL +
Sbjct: 93 KPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPE 152
Query: 148 AAAMLRDNPRLFESNVK 164
A M + + +ES +
Sbjct: 153 IAHMYKTDKNKYESTAR 169
>AT1G16890.1 | Symbols: UBC36, UBC13B | ubiquitin-conjugating
enzyme, putative | chr1:5776550-5777903 REVERSE
Length = 120
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 59/96 (61%)
Query: 60 VVTVKPDEGYYKNGNFQFSFQVPDVYPHEAPKVKCQTKVYHPNIDLEGNVCLNILREDWK 119
V+ + P + Y+ G F+ +P+ YP APKV+ TK+YHPNID G +CL+IL++ W
Sbjct: 6 VMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWS 65
Query: 120 PVLNINTIIYGLFHLFTQPNREDPLNSDAAAMLRDN 155
P L I T++ + L + PN +DPL+ + A + N
Sbjct: 66 PALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKSN 101
>AT1G64230.3 | Symbols: UBC28 | ubiquitin-conjugating enzyme,
putative | chr1:23833792-23835220 FORWARD
Length = 157
Score = 88.2 bits (217), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 78/144 (54%), Gaps = 10/144 (6%)
Query: 31 RLHKDISEL--NLPKSCTISFTNG-------KDDLMNFVVTVK-PDEGYYKNGNFQFSFQ 80
R+ K++ +L + P SC+ + +D+ ++ T+ P + Y G F +
Sbjct: 5 RILKELKDLQKDPPTSCSAEVSGHCYGTCPVAEDMFHWQATIMGPSDSPYSGGVFLVTIH 64
Query: 81 VPDVYPHEAPKVKCQTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNR 140
P YP + PKV +TKV+HPN++ G++CL+IL+E W P L I+ ++ + L T PN
Sbjct: 65 FPPDYPFKPPKVAFRTKVFHPNVNSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNP 124
Query: 141 EDPLNSDAAAMLRDNPRLFESNVK 164
+DPL + A M + + +ES +
Sbjct: 125 DDPLVPEIAHMYKTDRAKYESTAR 148
>AT1G78870.1 | Symbols: UBC35, UBC13A | UBC35 (UBIQUITIN-CONJUGATING
ENZYME 35); protein binding / ubiquitin-protein ligase |
chr1:29650589-29652203 FORWARD
Length = 154
Score = 88.2 bits (217), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 73/127 (57%), Gaps = 2/127 (1%)
Query: 31 RLHKDISELNLPKSCTISFTNGKDDLMNF-VVTVKPDEGYYKN-GNFQFSFQVPDVYPHE 88
R+ K+ L + IS + +D++ F V+ + P + Y+ G F+ +P+ YP
Sbjct: 9 RIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGRGVFKLELFLPEEYPMA 68
Query: 89 APKVKCQTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNREDPLNSDA 148
APKV+ TK+YHPNID G +CL+IL++ W P L I T++ + L + PN +DPL+ +
Sbjct: 69 APKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENI 128
Query: 149 AAMLRDN 155
A + N
Sbjct: 129 AKHWKSN 135
>AT1G64230.4 | Symbols: UBC28 | ubiquitin-conjugating enzyme,
putative | chr1:23833792-23835220 FORWARD
Length = 190
Score = 87.0 bits (214), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 65/112 (58%), Gaps = 1/112 (0%)
Query: 54 DDLMNFVVTVK-PDEGYYKNGNFQFSFQVPDVYPHEAPKVKCQTKVYHPNIDLEGNVCLN 112
+D+ ++ T+ P + Y G F + P YP + PKV +TKV+HPN++ G++CL+
Sbjct: 70 EDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNVNSNGSICLD 129
Query: 113 ILREDWKPVLNINTIIYGLFHLFTQPNREDPLNSDAAAMLRDNPRLFESNVK 164
IL+E W P L I+ ++ + L T PN +DPL + A M + + +ES +
Sbjct: 130 ILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYESTAR 181
>AT2G02760.1 | Symbols: ATUBC2, UBC2 | ATUBC2
(UBIQUITING-CONJUGATING ENZYME 2); ubiquitin-protein
ligase | chr2:774271-775149 FORWARD
Length = 152
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 75/144 (52%), Gaps = 1/144 (0%)
Query: 31 RLHKDISELNLPKSCTISFTNGKDDLMNF-VVTVKPDEGYYKNGNFQFSFQVPDVYPHEA 89
RL +D L IS +++M + V PD+ + G F+ S Q + YP++
Sbjct: 8 RLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKP 67
Query: 90 PKVKCQTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNREDPLNSDAA 149
P V+ ++++HPNI +G++CL+IL+ W P+ ++ I+ + L PN P NS+AA
Sbjct: 68 PTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAA 127
Query: 150 AMLRDNPRLFESNVKKAMAGGFIG 173
M ++ R + V++ + +
Sbjct: 128 RMFSESKREYNRRVREVVEQSWTA 151
>AT1G63800.1 | Symbols: UBC5 | UBC5 (ubiquitin-conjugating enzyme
5); ubiquitin-protein ligase | chr1:23667888-23669003
REVERSE
Length = 185
Score = 84.7 bits (208), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 67/110 (60%), Gaps = 4/110 (3%)
Query: 59 FVVTVKPDEGYYKNGNFQFSFQVPDVYPHEAPKVKCQTKVYHPNID-LEGNVCLNILRED 117
FV P + Y+ G ++ ++PD YP+++P V TK+YHPN+D + G+VCL+++ +
Sbjct: 33 FVEFSGPKDSIYEGGVWKIRVELPDAYPYKSPSVGFITKIYHPNVDEMSGSVCLDVINQT 92
Query: 118 WKPVLN-INTIIYGLFHLFTQPNREDPLNSDAAA-MLRDNPRLFESNVKK 165
W P+ + +N L L PN DPLN +AAA M+RD P +E VK+
Sbjct: 93 WSPMFDLVNVFETFLPQLLLYPNPSDPLNGEAAALMMRDRP-TYEQRVKE 141
>AT5G41340.1 | Symbols: UBC4, ATUBC4 | UBC4 (UBIQUITIN CONJUGATING
ENZYME 4); ubiquitin-protein ligase |
chr5:16538296-16539956 REVERSE
Length = 187
Score = 84.3 bits (207), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 69/116 (59%), Gaps = 5/116 (4%)
Query: 54 DDLMNFVVTVK-PDEGYYKNGNFQFSFQVPDVYPHEAPKVKCQTKVYHPNID-LEGNVCL 111
D + F V P + Y+ G ++ ++PD YP+++P V TK+YHPN+D L G+VCL
Sbjct: 27 DGMQEFYVEFNGPKDSLYQGGVWKIRVELPDAYPYKSPSVGFITKIYHPNVDELSGSVCL 86
Query: 112 NILREDWKPVLN-INTIIYGLFHLFTQPNREDPLNSDAAA-MLRDNPRLFESNVKK 165
+++ + W P+ + +N L L PN DPLN +AAA M+RD P +E VK+
Sbjct: 87 DVINQTWSPMFDLVNVFETFLPQLLLYPNPSDPLNGEAAALMMRDRP-AYEQRVKE 141
>AT1G14400.2 | Symbols: UBC1, ATUBC1 | UBC1 (UBIQUITIN CARRIER
PROTEIN 1); ubiquitin-protein ligase |
chr1:4927294-4928136 REVERSE
Length = 152
Score = 84.3 bits (207), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 74/144 (51%), Gaps = 1/144 (0%)
Query: 31 RLHKDISELNLPKSCTISFTNGKDDLMNF-VVTVKPDEGYYKNGNFQFSFQVPDVYPHEA 89
RL +D L IS +++M + V PD+ + G F+ S Q + YP++
Sbjct: 8 RLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKP 67
Query: 90 PKVKCQTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNREDPLNSDAA 149
P V+ ++++HPNI +G++CL+IL+ W P+ ++ I+ + L PN P NS+AA
Sbjct: 68 PTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAA 127
Query: 150 AMLRDNPRLFESNVKKAMAGGFIG 173
M ++ R + V+ + +
Sbjct: 128 RMYSESKREYNRRVRDVVEQSWTA 151
>AT1G14400.1 | Symbols: UBC1, ATUBC1 | UBC1 (UBIQUITIN CARRIER
PROTEIN 1); ubiquitin-protein ligase |
chr1:4927294-4928136 REVERSE
Length = 152
Score = 84.3 bits (207), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 74/144 (51%), Gaps = 1/144 (0%)
Query: 31 RLHKDISELNLPKSCTISFTNGKDDLMNF-VVTVKPDEGYYKNGNFQFSFQVPDVYPHEA 89
RL +D L IS +++M + V PD+ + G F+ S Q + YP++
Sbjct: 8 RLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKP 67
Query: 90 PKVKCQTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNREDPLNSDAA 149
P V+ ++++HPNI +G++CL+IL+ W P+ ++ I+ + L PN P NS+AA
Sbjct: 68 PTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAA 127
Query: 150 AMLRDNPRLFESNVKKAMAGGFIG 173
M ++ R + V+ + +
Sbjct: 128 RMYSESKREYNRRVRDVVEQSWTA 151
>AT3G08700.1 | Symbols: UBC12 | UBC12 (ubiquitin-conjugating enzyme
12); small conjugating protein ligase/ ubiquitin-protein
ligase | chr3:2643482-2644545 FORWARD
Length = 149
Score = 84.0 bits (206), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 76/138 (55%), Gaps = 4/138 (2%)
Query: 31 RLHKDISEL--NLPKSCTISFTNGKDDLMNFVVTVK-PDEGYYKNGNFQFSFQVPDVYPH 87
R+ +++ ++ + P +C+ ++D+ ++ T+ P + Y G F S YP
Sbjct: 5 RISRELRDMQRHPPANCSAGPV-AEEDIFHWQATIMGPHDSPYSGGVFTVSIDFSSDYPF 63
Query: 88 EAPKVKCQTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNREDPLNSD 147
+ PKV +TKVYHPNID +G++CL+IL+E W P + ++ + L T PN DPL +
Sbjct: 64 KPPKVNFKTKVYHPNIDSKGSICLDILKEQWSPAPTTSKVLLSICSLLTDPNPNDPLVPE 123
Query: 148 AAAMLRDNPRLFESNVKK 165
A + + + +ES +K
Sbjct: 124 IAHLYKVDKSKYESTAQK 141
>AT5G25760.2 | Symbols: PEX4 | PEX4 (PEROXIN4); protein binding /
ubiquitin-protein ligase | chr5:8967983-8969173 FORWARD
Length = 157
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 67/133 (50%), Gaps = 4/133 (3%)
Query: 27 AGELRLHKDISELNLPKSCT--ISFTNGKDDLMNFVVTVK-PDEGYYKNGNFQFSFQVPD 83
A RL K+ E+ K I ++ + +K P E Y+ G FQ +F VP+
Sbjct: 3 ASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPE 62
Query: 84 VYPHEAPKVKCQTKVYHPNIDLE-GNVCLNILREDWKPVLNINTIIYGLFHLFTQPNRED 142
YP + P+V+ TK++HPN+ + G +CL+IL+ W P + ++ + L P +
Sbjct: 63 PYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDS 122
Query: 143 PLNSDAAAMLRDN 155
PLN D+ +LR
Sbjct: 123 PLNCDSGNLLRSG 135
>AT5G25760.1 | Symbols: PEX4, UBC21 | PEX4 (PEROXIN4); protein
binding / ubiquitin-protein ligase |
chr5:8967983-8969173 FORWARD
Length = 157
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 67/133 (50%), Gaps = 4/133 (3%)
Query: 27 AGELRLHKDISELNLPKSCT--ISFTNGKDDLMNFVVTVK-PDEGYYKNGNFQFSFQVPD 83
A RL K+ E+ K I ++ + +K P E Y+ G FQ +F VP+
Sbjct: 3 ASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPE 62
Query: 84 VYPHEAPKVKCQTKVYHPNIDLE-GNVCLNILREDWKPVLNINTIIYGLFHLFTQPNRED 142
YP + P+V+ TK++HPN+ + G +CL+IL+ W P + ++ + L P +
Sbjct: 63 PYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDS 122
Query: 143 PLNSDAAAMLRDN 155
PLN D+ +LR
Sbjct: 123 PLNCDSGNLLRSG 135
>AT3G24515.1 | Symbols: UBC37 | UBC37 (ubiquitin-conjugating enzyme
37); small conjugating protein ligase/ ubiquitin-protein
ligase | chr3:8934569-8936207 REVERSE
Length = 409
Score = 80.1 bits (196), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 63/121 (52%), Gaps = 8/121 (6%)
Query: 48 SFTNGKDDLMNFVVT----VKPDEGYYKNGNFQFSFQVPDVYPHEAPKVKCQTKVYHPNI 103
S NG D F P++ Y NG F Q+P+ YP + P V T +YHPNI
Sbjct: 33 SAANGSGDFSTFSTIDAQIEGPEDTVYANGIFNLKIQIPERYPFQPPIVSFATPIYHPNI 92
Query: 104 DLEGNVCLNIL----REDWKPVLNINTIIYGLFHLFTQPNREDPLNSDAAAMLRDNPRLF 159
D G +CL+IL + W+P LNI+T++ + L ++PN +D L + + + N + F
Sbjct: 93 DNSGRICLDILNLPPKGAWQPSLNISTVLTSMRLLLSEPNPDDGLMCEVSREYKYNRQTF 152
Query: 160 E 160
+
Sbjct: 153 D 153
>AT5G50870.1 | Symbols: UBC27 | UBC27 (ubiquitin-conjugating enzyme
27); ubiquitin-protein ligase | chr5:20699626-20700998
REVERSE
Length = 192
Score = 79.3 bits (194), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 70/137 (51%), Gaps = 3/137 (2%)
Query: 31 RLHKDISELNLPK-SCTISFTNGKDDLMNFVVTVKPDEGY-YKNGNFQFSFQVPDVYPHE 88
R+ K++ + + S I D+L T+ G Y+ G FQ +PD YP E
Sbjct: 6 RIQKELQDCERNQDSSGIRVCPKSDNLTRLTGTIPGPIGTPYEGGTFQIDITMPDGYPFE 65
Query: 89 APKVKCQTKVYHPNIDLE-GNVCLNILREDWKPVLNINTIIYGLFHLFTQPNREDPLNSD 147
PK++ TKV+HPNI + G +CL+IL++ W P L + T + + L + P +DP ++
Sbjct: 66 PPKMQFSTKVWHPNISSQSGAICLDILKDQWSPALTLKTALVSIQALLSAPEPKDPQDAV 125
Query: 148 AAAMLRDNPRLFESNVK 164
A N ++F S +
Sbjct: 126 VAEQYMKNYQVFVSTAR 142
>AT2G46030.1 | Symbols: UBC6 | UBC6 (ubiquitin-conjugating enzyme
6); ubiquitin-protein ligase | chr2:18932243-18933421
REVERSE
Length = 183
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 65/115 (56%), Gaps = 3/115 (2%)
Query: 54 DDLMNFVVTVK-PDEGYYKNGNFQFSFQVPDVYPHEAPKVKCQTKVYHPNID-LEGNVCL 111
DDL F VT P + Y+ G ++ ++P+ YP+++P V K+YHPN+D G VCL
Sbjct: 27 DDLQMFYVTFHGPTDSLYQGGVWKIKVELPEAYPYKSPSVGFVNKIYHPNVDESSGAVCL 86
Query: 112 NILREDWKPVLN-INTIIYGLFHLFTQPNREDPLNSDAAAMLRDNPRLFESNVKK 165
+++ + W P+ + IN L L PN DP N +AA++L + +E VK+
Sbjct: 87 DVINQTWSPMFDLINVFESFLPQLLLYPNPSDPFNGEAASLLMRDRAAYELKVKE 141
>AT1G78870.3 | Symbols: UBC35, UBC13A | UBC35 (UBIQUITIN-CONJUGATING
ENZYME 35); protein binding / ubiquitin-protein ligase |
chr1:29650589-29651858 FORWARD
Length = 112
Score = 77.8 bits (190), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 59/99 (59%), Gaps = 1/99 (1%)
Query: 31 RLHKDISELNLPKSCTISFTNGKDDLMNF-VVTVKPDEGYYKNGNFQFSFQVPDVYPHEA 89
R+ K+ L + IS + +D++ F V+ + P + Y+ G F+ +P+ YP A
Sbjct: 9 RIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAA 68
Query: 90 PKVKCQTKVYHPNIDLEGNVCLNILREDWKPVLNINTII 128
PKV+ TK+YHPNID G +CL+IL++ W P L I T++
Sbjct: 69 PKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVL 107
>AT1G36340.1 | Symbols: UBC31 | UBC31 (ubiquitin-conjugating enzyme
31); small conjugating protein ligase/ ubiquitin-protein
ligase | chr1:13683791-13684924 REVERSE
Length = 154
Score = 76.3 bits (186), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 68/129 (52%), Gaps = 1/129 (0%)
Query: 41 LPKSCTISFTNGKDDLMNFVVTVK-PDEGYYKNGNFQFSFQVPDVYPHEAPKVKCQTKVY 99
+ K S +++ + ++ PD Y+ G F S + P YP + PK +T +Y
Sbjct: 21 ISKESLFSIGQNSNNIYEWTAVIRGPDGTPYEGGMFNLSIKFPTDYPFKPPKFTFKTPIY 80
Query: 100 HPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNREDPLNSDAAAMLRDNPRLF 159
HPNI+ EG++C+NIL++ W P L + ++ + L +PN +DPL + + ++N F
Sbjct: 81 HPNINDEGSICMNILKDKWTPALMVEKVLLSILLLLEKPNPDDPLVPEIGQLFKNNRFQF 140
Query: 160 ESNVKKAMA 168
+ ++ A
Sbjct: 141 DQRAREFTA 149
>AT5G62540.1 | Symbols: UBC3 | UBC3 (ubiquitin-conjugating enzyme
3); ubiquitin-protein ligase | chr5:25104679-25105465
FORWARD
Length = 150
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 75/143 (52%), Gaps = 1/143 (0%)
Query: 31 RLHKDISELNLPKSCTISFTNGKDDLMNF-VVTVKPDEGYYKNGNFQFSFQVPDVYPHEA 89
RL D L IS +++M++ + P++ + G F+ + + YP++
Sbjct: 8 RLMWDFKRLQKDPPVGISGAPQDNNIMHWNALIFGPEDTPWDGGTFKLTLHFTEDYPNKP 67
Query: 90 PKVKCQTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNREDPLNSDAA 149
P V+ ++++HPNI +G++CL+IL+ W P+ ++ ++ + L PN + P N++AA
Sbjct: 68 PIVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAVLTSIQSLLCDPNPDSPANAEAA 127
Query: 150 AMLRDNPRLFESNVKKAMAGGFI 172
+ +N R + V + + ++
Sbjct: 128 RLFSENKREYNRKVIEIVEQSYV 150
>AT3G20060.1 | Symbols: UBC19 | UBC19 (ubiquitin-conjugating
enzyme19); ubiquitin-protein ligase |
chr3:7002927-7004283 REVERSE
Length = 181
Score = 74.3 bits (181), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 68/125 (54%), Gaps = 1/125 (0%)
Query: 31 RLHKDISELNLPKSCTISFTNGKDDLMNFVVTVK-PDEGYYKNGNFQFSFQVPDVYPHEA 89
RL ++ L + IS +D++ + T+ + ++ ++ S + YP ++
Sbjct: 40 RLQSELMGLMMGADPGISAFPEEDNIFCWKGTITGSKDTVFEGTEYRLSLTFSNDYPFKS 99
Query: 90 PKVKCQTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNREDPLNSDAA 149
PKVK +T +HPN+DL GN+CL+IL++ W ++ TI+ + L +PN PLN+ AA
Sbjct: 100 PKVKFETCCFHPNVDLYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNNQAA 159
Query: 150 AMLRD 154
+ +
Sbjct: 160 QLWSN 164
>AT3G13550.1 | Symbols: FUS9, EMB144, COP10, CIN4 | FUS9 (FUSCA 9);
protein binding / ubiquitin-protein ligase |
chr3:4423569-4424797 REVERSE
Length = 182
Score = 73.6 bits (179), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 63/119 (52%), Gaps = 1/119 (0%)
Query: 26 SAGELRLHKDISELNLPKSCTISFTNGKDDLMNFVVTV-KPDEGYYKNGNFQFSFQVPDV 84
SA R+ ++++ELN+ S D+L +++ T+ P Y+ G F P
Sbjct: 35 SASGKRIQREMAELNIDPPPDCSAGPKGDNLYHWIATIIGPSGTPYEGGIFFLDIIFPSD 94
Query: 85 YPHEAPKVKCQTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNREDP 143
YP + PK+ +T++YH N+D G++ +NILR+ W P L I ++ + +F +P P
Sbjct: 95 YPFKPPKLVFKTRIYHCNVDTAGDLSVNILRDSWSPALTITKVLQAIRSIFLKPEPYSP 153
>AT5G53300.3 | Symbols: | UBC10 (ubiquitin-conjugating enzyme 10);
ubiquitin-protein ligase | chr5:21633187-21633989
REVERSE
Length = 109
Score = 73.6 bits (179), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 61/105 (58%), Gaps = 5/105 (4%)
Query: 31 RLHKDISEL--NLPKSCTISFTNGKDDLMNFVVTVK-PDEGYYKNGNFQFSFQVPDVYPH 87
R+ K++ +L + P SC+ +D+ ++ T+ P E Y G F + P YP
Sbjct: 5 RILKELKDLQKDPPTSCSAG--PVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDYPF 62
Query: 88 EAPKVKCQTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLF 132
+ PKV +TKV+HPNI+ G++CL+IL+E W P L I+ + + LF
Sbjct: 63 KPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVRFLLF 107
>AT3G20060.2 | Symbols: UBC19 | UBC19 (ubiquitin-conjugating
enzyme19); ubiquitin-protein ligase |
chr3:7002927-7003727 REVERSE
Length = 136
Score = 73.6 bits (179), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 52/85 (61%)
Query: 70 YKNGNFQFSFQVPDVYPHEAPKVKCQTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIY 129
++ ++ S + YP ++PKVK +T +HPN+DL GN+CL+IL++ W ++ TI+
Sbjct: 35 FEGTEYRLSLTFSNDYPFKSPKVKFETCCFHPNVDLYGNICLDILQDKWSSAYDVRTILL 94
Query: 130 GLFHLFTQPNREDPLNSDAAAMLRD 154
+ L +PN PLN+ AA + +
Sbjct: 95 SIQSLLGEPNISSPLNNQAAQLWSN 119
>AT3G13550.2 | Symbols: FUS9, EMB144, COP10, CIN4 | FUS9 (FUSCA 9);
protein binding / ubiquitin-protein ligase |
chr3:4423828-4424797 REVERSE
Length = 170
Score = 72.4 bits (176), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 62/114 (54%), Gaps = 1/114 (0%)
Query: 26 SAGELRLHKDISELNLPKSCTISFTNGKDDLMNFVVTV-KPDEGYYKNGNFQFSFQVPDV 84
SA R+ ++++ELN+ S D+L +++ T+ P Y+ G F P
Sbjct: 35 SASGKRIQREMAELNIDPPPDCSAGPKGDNLYHWIATIIGPSGTPYEGGIFFLDIIFPSD 94
Query: 85 YPHEAPKVKCQTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQP 138
YP + PK+ +T++YH N+D G++ +NILR+ W P L I ++ + +F +P
Sbjct: 95 YPFKPPKLVFKTRIYHCNVDTAGDLSVNILRDSWSPALTITKVLQAIRSIFLKP 148
>AT1G50490.1 | Symbols: UBC20 | UBC20 (ubiquitin-conjugating enzyme
20); ubiquitin-protein ligase | chr1:18705005-18706303
REVERSE
Length = 180
Score = 71.6 bits (174), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 51/85 (60%)
Query: 70 YKNGNFQFSFQVPDVYPHEAPKVKCQTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIY 129
++ ++ S + YP + PKVK +T +HPN+D+ GN+CL+IL++ W ++ TI+
Sbjct: 79 FEGTEYRLSLSFSNDYPFKPPKVKFETCCFHPNVDVYGNICLDILQDKWSSAYDVRTILL 138
Query: 130 GLFHLFTQPNREDPLNSDAAAMLRD 154
+ L +PN PLN+ AA + +
Sbjct: 139 SIQSLLGEPNISSPLNTQAAQLWSN 163
>AT5G41700.3 | Symbols: UBC8, ATUBC8 | UBC8 (UBIQUITIN CONJUGATING
ENZYME 8); protein binding / ubiquitin-protein ligase |
chr5:16676072-16677021 FORWARD
Length = 145
Score = 70.9 bits (172), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 61/104 (58%), Gaps = 7/104 (6%)
Query: 31 RLHKDISEL--NLPKSCTISFTNGKDDLMNFVVTVK-PDEGYYKNGNFQFSFQVPDVYPH 87
R+ K++ +L + P SC S +D+ ++ T+ P E Y G F + P YP
Sbjct: 5 RILKELKDLQKDPPTSC--SAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDYPF 62
Query: 88 EAPKVKCQTKVYHPNIDLEGNVCLNILREDWKPVLNIN--TIIY 129
+ PKV +TKV+HPNI+ G++CL+IL+E W P L I+ T+I+
Sbjct: 63 KPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVTLIF 106
>AT5G05080.2 | Symbols: UBC22 | UBC22 (ubiquitin-conjugating enzyme
22); ubiquitin-protein ligase | chr5:1498727-1499972
REVERSE
Length = 251
Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 47/86 (54%)
Query: 70 YKNGNFQFSFQVPDVYPHEAPKVKCQTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIY 129
Y+NG F+ + +PH PK TK++HPN+ G +C+N L++DW P L + ++
Sbjct: 54 YENGLFRMKLALSHDFPHSPPKGYFMTKIFHPNVASNGEICVNTLKKDWNPSLGLRHVLS 113
Query: 130 GLFHLFTQPNREDPLNSDAAAMLRDN 155
+ L +P E LN A ML +N
Sbjct: 114 VVRCLLIEPFPESALNEQAGKMLLEN 139
>AT5G05080.1 | Symbols: UBC22 | UBC22 (ubiquitin-conjugating enzyme
22); ubiquitin-protein ligase | chr5:1498727-1499972
REVERSE
Length = 251
Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 47/86 (54%)
Query: 70 YKNGNFQFSFQVPDVYPHEAPKVKCQTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIY 129
Y+NG F+ + +PH PK TK++HPN+ G +C+N L++DW P L + ++
Sbjct: 54 YENGLFRMKLALSHDFPHSPPKGYFMTKIFHPNVASNGEICVNTLKKDWNPSLGLRHVLS 113
Query: 130 GLFHLFTQPNREDPLNSDAAAMLRDN 155
+ L +P E LN A ML +N
Sbjct: 114 VVRCLLIEPFPESALNEQAGKMLLEN 139
>AT3G57870.1 | Symbols: AHUS5, EMB1637, SCE1, SCE1A, ATSCE1 | SCE1
(SUMO CONJUGATION ENZYME 1); SUMO ligase |
chr3:21428831-21430110 REVERSE
Length = 160
Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 65/145 (44%), Gaps = 6/145 (4%)
Query: 26 SAGELRLHKDISELNLPKSCTISFTNGKDDLMNFVV---TVKPDEGY-YKNGNFQFSFQV 81
+ G L + N P G+D +N +V T+ G ++ G F +
Sbjct: 6 ARGRLAEERKSWRKNHPHGFVAKPETGQDGTVNLMVWHCTIPGKAGTDWEGGFFPLTMHF 65
Query: 82 PDVYPHEAPKVKCQTKVYHPNIDLEGNVCLNILRED--WKPVLNINTIIYGLFHLFTQPN 139
+ YP + PK K +HPN+ G VCL+IL ED W+P + + I+ G+ L PN
Sbjct: 66 SEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDYGWRPAITVKQILVGIQDLLDTPN 125
Query: 140 REDPLNSDAAAMLRDNPRLFESNVK 164
DP +D + +P ++ VK
Sbjct: 126 PADPAQTDGYHLFCQDPVEYKKRVK 150
>AT3G55380.1 | Symbols: UBC14 | UBC14 (ubiquitin-conjugating enzyme
14); ubiquitin-protein ligase | chr3:20531520-20532895
FORWARD
Length = 167
Score = 67.4 bits (163), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 56/121 (46%), Gaps = 13/121 (10%)
Query: 60 VVTVKPDEGYYKNGNFQFSFQVPDVYPHEAPKVKCQTKVYHPNIDLEGNVCLNILR---- 115
V + P + Y+ G F P+ YP P V ++++HPN+ +G VC++IL
Sbjct: 40 VSIMGPPDTLYEGGFFNAIMSFPENYPVSPPTVTFTSEMWHPNVYSDGKVCISILHPPGD 99
Query: 116 ---------EDWKPVLNINTIIYGLFHLFTQPNREDPLNSDAAAMLRDNPRLFESNVKKA 166
E W PV + +I+ + + + PN E P N +AA RDN F V +
Sbjct: 100 DPHGYELASERWTPVHTVESIVLSIISMLSGPNDESPANVEAAKEWRDNRAEFRKKVSRC 159
Query: 167 M 167
+
Sbjct: 160 V 160
>AT5G59300.1 | Symbols: UBC7, ATUBC7 | UBC7 (UBIQUITIN CARRIER
PROTEIN 7); protein binding / ubiquitin-protein ligase |
chr5:23919868-23921291 REVERSE
Length = 198
Score = 65.9 bits (159), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 56/121 (46%), Gaps = 13/121 (10%)
Query: 60 VVTVKPDEGYYKNGNFQFSFQVPDVYPHEAPKVKCQTKVYHPNIDLEGNVCLNILR---- 115
V + P + Y+ G F P YP+ P V+ + ++HPN+ +G VC++IL
Sbjct: 71 VTIIGPPDTLYEGGFFNAIMTFPQNYPNSPPTVRFTSDMWHPNVYSDGRVCISILHPPGD 130
Query: 116 ---------EDWKPVLNINTIIYGLFHLFTQPNREDPLNSDAAAMLRDNPRLFESNVKKA 166
E W PV + +I+ + + + PN E P N +AA RD F+ V +
Sbjct: 131 DPSGYELASERWTPVHTVESIMLSIISMLSGPNDESPANVEAAKEWRDKRDEFKKKVSRC 190
Query: 167 M 167
+
Sbjct: 191 V 191
>AT3G46460.1 | Symbols: UBC13 | UBC13 (ubiquitin-conjugating enzyme
13); ubiquitin-protein ligase | chr3:17096120-17097315
REVERSE
Length = 166
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 56/121 (46%), Gaps = 13/121 (10%)
Query: 60 VVTVKPDEGYYKNGNFQFSFQVPDVYPHEAPKVKCQTKVYHPNIDLEGNVCLNILR---- 115
V + P + Y+ G F P YP+ P V+ + ++HPN+ +G VC++IL
Sbjct: 39 VTIIGPPDTLYEGGFFYAIMSFPQNYPNSPPTVRFTSDIWHPNVYPDGRVCISILHPPGD 98
Query: 116 ---------EDWKPVLNINTIIYGLFHLFTQPNREDPLNSDAAAMLRDNPRLFESNVKKA 166
E W PV + +I+ + + + PN E P N +AA R+ F+ V +
Sbjct: 99 DPSGYELASERWTPVHTVESIMLSIISMLSGPNDESPANVEAAKEWREKRDEFKKKVSRC 158
Query: 167 M 167
+
Sbjct: 159 V 159
>AT1G45050.1 | Symbols: ATUBC2-1, UBC15 | ATUBC2-1;
ubiquitin-protein ligase | chr1:17031337-17032967
FORWARD
Length = 161
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 7/101 (6%)
Query: 31 RLHKDISE--LNLPKSCTISFTNGKDDLMNFVVTVKPDEG-YYKNGNFQFSFQVPDVYPH 87
RL K++SE LN P T D+L + + V G Y N +Q + P+ YP
Sbjct: 19 RLQKELSEWQLNPPTGFRHKVT---DNLQKWTIDVTGAPGTLYANETYQLQVEFPEHYPM 75
Query: 88 EAPKVKCQTKV-YHPNIDLEGNVCLNILREDWKPVLNINTI 127
EAP+V + HP+I G++CL+IL + W P + +N++
Sbjct: 76 EAPQVVFVSPAPSHPHIYSNGHICLDILYDSWSPAMTVNSV 116
>AT4G36410.1 | Symbols: UBC17 | UBC17 (UBIQUITIN-CONJUGATING ENZYME
17); small conjugating protein ligase/ ubiquitin-protein
ligase | chr4:17201969-17202890 FORWARD
Length = 161
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 54 DDLMNFVVTVKPDEG-YYKNGNFQFSFQVPDVYPHEAPKVKCQTKV-YHPNIDLEGNVCL 111
D+L +++ V G Y N +Q + P+ YP EAP+V Q HP+I G++CL
Sbjct: 41 DNLQRWIIEVHGVPGTLYANETYQLQVEFPEHYPMEAPQVIFQHPAPLHPHIYSNGHICL 100
Query: 112 NILREDWKPVLNINTI 127
++L + W P + +++I
Sbjct: 101 DVLYDSWSPAMRLSSI 116
>AT5G42990.1 | Symbols: UBC18 | UBC18 (ubiquitin-conjugating enzyme
18); small conjugating protein ligase/ ubiquitin-protein
ligase | chr5:17244206-17245904 REVERSE
Length = 161
Score = 50.8 bits (120), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 51/101 (50%), Gaps = 7/101 (6%)
Query: 31 RLHKDISE--LNLPKSCTISFTNGKDDLMNFVVTVKPDEG-YYKNGNFQFSFQVPDVYPH 87
RL K++SE +N P T D+L +V+ V G Y N + + P YP
Sbjct: 19 RLQKELSEWQVNPPTGFKHRVT---DNLQKWVIEVTGAPGTLYANETYNLQVEFPQHYPM 75
Query: 88 EAPKVK-CQTKVYHPNIDLEGNVCLNILREDWKPVLNINTI 127
EAP+V HP+I G++CL+IL + W P + ++++
Sbjct: 76 EAPQVIFVPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSV 116
>AT1G75440.1 | Symbols: UBC16 | UBC16 (ubiquitin-conjugating enzyme
16); small conjugating protein ligase/ ubiquitin-protein
ligase | chr1:28313623-28314960 FORWARD
Length = 161
Score = 50.1 bits (118), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 51/101 (50%), Gaps = 7/101 (6%)
Query: 31 RLHKDISE--LNLPKSCTISFTNGKDDLMNFVVTVKPDEG-YYKNGNFQFSFQVPDVYPH 87
RL K++ E +N P T D+L +++ V G Y N +Q P+ YP
Sbjct: 19 RLQKELVEWQMNPPTGFKHKVT---DNLQRWIIEVIGAPGTLYANDTYQLQVDFPEHYPM 75
Query: 88 EAPKVK-CQTKVYHPNIDLEGNVCLNILREDWKPVLNINTI 127
E+P+V HP+I G++CL+IL + W P + +++I
Sbjct: 76 ESPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSI 116
>AT2G32790.1 | Symbols: | ubiquitin-conjugating enzyme, putative |
chr2:13905649-13906271 REVERSE
Length = 177
Score = 47.0 bits (110), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 77/158 (48%), Gaps = 2/158 (1%)
Query: 5 FKVKEKQKEISDNGKAPVKKQSAGELRLHKDISELN-LPKSCTISFTNGKDDLMNFVVTV 63
FKV++ + +P + E RL K+ E + + K S+ +++ + TV
Sbjct: 7 FKVRKFFTSRNSGKVSPDTVSKSAENRLWKEFQEKDDVLKIHVRSWLPSPENIFRWEATV 66
Query: 64 KPDEGY-YKNGNFQFSFQVPDVYPHEAPKVKCQTKVYHPNIDLEGNVCLNILREDWKPVL 122
G Y+ G F S +P YP+E PK+ +TK++HPNI G + ++IL W L
Sbjct: 67 NGPVGCPYEKGVFTVSVHIPPKYPYEPPKITFKTKIFHPNISEIGEIFVDILGSRWSSAL 126
Query: 123 NINTIIYGLFHLFTQPNREDPLNSDAAAMLRDNPRLFE 160
IN ++ + + + P +++ AA + + + + +E
Sbjct: 127 TINLVLLSICSILSNPVEPLLVSNHAARLYQKDRKAYE 164