Jatropha Genome Database

JcCA0311161.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0311161.20 + phase: 1 /pseudo/partial
         (114 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G16785.1 | Symbols: PLDP1, PLDZ1, PLDZETA1, PLD ZETA 1 | PLDP...   119   4e-28
AT3G05630.1 | Symbols: PLDP2, PDLZ2, PLDZETA2 | PLDP2; phospholi...   110   2e-25

>AT3G16785.1 | Symbols: PLDP1, PLDZ1, PLDZETA1, PLD ZETA 1 | PLDP1
           (PHOSPHOLIPASE D P1); phospholipase D |
           chr3:5711329-5718696 FORWARD
          Length = 1096

 Score =  119 bits (298), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 57/71 (80%), Positives = 62/71 (87%)

Query: 26  IFDELPKATIVSVSKPDTGDISLILLSYTIELQFKQFHWRLVKKASQVLNLHFALKKRAM 85
           IF+ELPKA IVSVS+PD GDIS +LLSYTIE Q+KQF W+LVKKASQV  LHFALKKRA 
Sbjct: 45  IFEELPKAVIVSVSRPDAGDISPVLLSYTIECQYKQFKWQLVKKASQVFYLHFALKKRAF 104

Query: 86  IEEFHEKQEQV 96
           IEE HEKQEQV
Sbjct: 105 IEEIHEKQEQV 115


>AT3G05630.1 | Symbols: PLDP2, PDLZ2, PLDZETA2 | PLDP2;
           phospholipase D | chr3:1635321-1640105 FORWARD
          Length = 1046

 Score =  110 bits (275), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 57/88 (64%), Positives = 68/88 (77%), Gaps = 1/88 (1%)

Query: 26  IFDELPKATIVSVSKPDTGDISLILLSYTIELQFKQFHWRLVKKASQVLNLHFALKKRAM 85
           IFDELPKA IVSVS+PDT D S +LLSYT+ELQ+KQF W L KKASQVL LHFALKKR +
Sbjct: 40  IFDELPKAAIVSVSRPDTTDFSPLLLSYTLELQYKQFKWTLQKKASQVLYLHFALKKRLI 99

Query: 86  IEEFHEKQEQVCP-ISTIKFFKFEGIFI 112
           IEE H+KQEQV   + ++  F  +G  +
Sbjct: 100 IEELHDKQEQVREWLHSLGIFDMQGSVV 127