Jatropha Genome Database
- JcCA0310901.20
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0310901.20 + phase: 2 /pseudo/partial
(192 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G64230.2 | Symbols: UBC28 | ubiquitin-conjugating enzyme, put... 302 7e-83
AT1G64230.1 | Symbols: UBC28 | ubiquitin-conjugating enzyme, put... 302 7e-83
AT5G41700.1 | Symbols: UBC8, ATUBC8 | UBC8 (UBIQUITIN CONJUGATIN... 301 1e-82
AT5G41700.2 | Symbols: UBC8, ATUBC8 | UBC8 (UBIQUITIN CONJUGATIN... 301 1e-82
AT4G27960.1 | Symbols: UBC9 | UBC9 (UBIQUITIN CONJUGATING ENZYME... 298 1e-81
AT4G27960.2 | Symbols: UBC9 | UBC9 (UBIQUITIN CONJUGATING ENZYME... 298 1e-81
AT5G53300.2 | Symbols: UBC10 | UBC10 (ubiquitin-conjugating enzy... 298 2e-81
AT5G53300.1 | Symbols: UBC10 | UBC10 (ubiquitin-conjugating enzy... 298 2e-81
AT3G08690.1 | Symbols: UBC11, ATUBC11 | UBC11 (UBIQUITIN-CONJUGA... 295 1e-80
AT5G41700.4 | Symbols: UBC8, ATUBC8 | UBC8 (UBIQUITIN CONJUGATIN... 294 2e-80
AT1G64230.3 | Symbols: UBC28 | ubiquitin-conjugating enzyme, put... 291 2e-79
AT5G56150.2 | Symbols: UBC30 | UBC30 (ubiquitin-conjugating enzy... 281 2e-76
AT5G56150.1 | Symbols: UBC30 | UBC30 (ubiquitin-conjugating enzy... 281 2e-76
AT1G64230.4 | Symbols: UBC28 | ubiquitin-conjugating enzyme, put... 280 3e-76
AT2G16740.1 | Symbols: UBC29 | UBC29 (ubiquitin-conjugating enzy... 276 4e-75
AT3G08700.1 | Symbols: UBC12 | UBC12 (ubiquitin-conjugating enzy... 249 7e-67
AT5G41700.3 | Symbols: UBC8, ATUBC8 | UBC8 (UBIQUITIN CONJUGATIN... 213 8e-56
AT5G53300.3 | Symbols: | UBC10 (ubiquitin-conjugating enzyme 10... 208 2e-54
AT3G13550.1 | Symbols: FUS9, EMB144, COP10, CIN4 | FUS9 (FUSCA 9... 166 8e-42
AT1G16890.2 | Symbols: UBC36, UBC13B | ubiquitin-conjugating enz... 154 4e-38
AT1G78870.2 | Symbols: UBC35, UBC13A | UBC35 (UBIQUITIN-CONJUGAT... 151 3e-37
AT5G62540.1 | Symbols: UBC3 | UBC3 (ubiquitin-conjugating enzyme... 147 5e-36
AT1G78870.1 | Symbols: UBC35, UBC13A | UBC35 (UBIQUITIN-CONJUGAT... 146 6e-36
AT1G14400.2 | Symbols: UBC1, ATUBC1 | UBC1 (UBIQUITIN CARRIER PR... 144 3e-35
AT1G14400.1 | Symbols: UBC1, ATUBC1 | UBC1 (UBIQUITIN CARRIER PR... 144 3e-35
AT1G36340.1 | Symbols: UBC31 | UBC31 (ubiquitin-conjugating enzy... 144 4e-35
AT2G02760.1 | Symbols: ATUBC2, UBC2 | ATUBC2 (UBIQUITING-CONJUGA... 144 5e-35
AT3G13550.2 | Symbols: FUS9, EMB144, COP10, CIN4 | FUS9 (FUSCA 9... 137 3e-33
AT1G16890.1 | Symbols: UBC36, UBC13B | ubiquitin-conjugating enz... 134 3e-32
AT5G50870.1 | Symbols: UBC27 | UBC27 (ubiquitin-conjugating enzy... 130 5e-31
AT3G24515.1 | Symbols: UBC37 | UBC37 (ubiquitin-conjugating enzy... 124 3e-29
AT2G32790.1 | Symbols: | ubiquitin-conjugating enzyme, putative... 121 3e-28
AT5G25760.2 | Symbols: PEX4 | PEX4 (PEROXIN4); protein binding /... 111 3e-25
AT5G25760.1 | Symbols: PEX4, UBC21 | PEX4 (PEROXIN4); protein bi... 111 3e-25
AT1G78870.3 | Symbols: UBC35, UBC13A | UBC35 (UBIQUITIN-CONJUGAT... 110 5e-25
AT3G20060.1 | Symbols: UBC19 | UBC19 (ubiquitin-conjugating enzy... 107 6e-24
AT1G50490.1 | Symbols: UBC20 | UBC20 (ubiquitin-conjugating enzy... 105 1e-23
AT3G55380.1 | Symbols: UBC14 | UBC14 (ubiquitin-conjugating enzy... 104 4e-23
AT2G46030.1 | Symbols: UBC6 | UBC6 (ubiquitin-conjugating enzyme... 103 8e-23
AT3G20060.2 | Symbols: UBC19 | UBC19 (ubiquitin-conjugating enzy... 102 1e-22
AT3G57870.1 | Symbols: AHUS5, EMB1637, SCE1, SCE1A, ATSCE1 | SCE... 100 5e-22
AT5G05080.2 | Symbols: UBC22 | UBC22 (ubiquitin-conjugating enzy... 100 6e-22
AT5G05080.1 | Symbols: UBC22 | UBC22 (ubiquitin-conjugating enzy... 100 6e-22
AT5G41340.1 | Symbols: UBC4, ATUBC4 | UBC4 (UBIQUITIN CONJUGATIN... 98 3e-21
AT1G63800.1 | Symbols: UBC5 | UBC5 (ubiquitin-conjugating enzyme... 98 3e-21
AT3G46460.1 | Symbols: UBC13 | UBC13 (ubiquitin-conjugating enzy... 98 4e-21
AT4G36800.2 | Symbols: RCE1 | RCE1 (RUB1 CONJUGATING ENZYME 1); ... 97 9e-21
AT4G36800.1 | Symbols: RCE1 | RCE1 (RUB1 CONJUGATING ENZYME 1); ... 97 9e-21
AT5G59300.1 | Symbols: UBC7, ATUBC7 | UBC7 (UBIQUITIN CARRIER PR... 94 4e-20
AT2G18600.1 | Symbols: | RUB1-conjugating enzyme, putative | ch... 91 3e-19
AT3G17000.1 | Symbols: UBC32 | UBC32 (ubiquitin-conjugating enzy... 84 8e-17
AT1G75440.1 | Symbols: UBC16 | UBC16 (ubiquitin-conjugating enzy... 79 2e-15
AT1G45050.1 | Symbols: ATUBC2-1, UBC15 | ATUBC2-1; ubiquitin-pro... 77 5e-15
AT5G42990.1 | Symbols: UBC18 | UBC18 (ubiquitin-conjugating enzy... 77 7e-15
AT4G36410.1 | Symbols: UBC17 | UBC17 (UBIQUITIN-CONJUGATING ENZY... 75 4e-14
AT5G50430.2 | Symbols: UBC33 | UBC33 (ubiquitin-conjugating enzy... 73 9e-14
AT5G50430.1 | Symbols: UBC33 | UBC33 (ubiquitin-conjugating enzy... 73 9e-14
AT1G17280.2 | Symbols: UBC34 | UBC34 (ubiquitin-conjugating enzy... 73 1e-13
AT1G17280.1 | Symbols: UBC34 | UBC34 (ubiquitin-conjugating enzy... 73 1e-13
AT3G15355.1 | Symbols: UBC25, PFU1 | UBC25 (UBIQUITIN-CONJUGATIN... 61 4e-10
AT1G53020.1 | Symbols: UBC26, PFU3 | UBC26 (UBIQUITIN-CONJUGATIN... 59 2e-09
AT2G33770.1 | Symbols: UBC24, ATUBC24, PHO2 | PHO2 (PHOSPHATE 2)... 58 4e-09
AT2G16920.1 | Symbols: UBC23, PFU2 | UBC23 (UBIQUITIN-CONJUGATIN... 57 7e-09
AT5G50430.3 | Symbols: UBC33 | UBC33 (ubiquitin-conjugating enzy... 57 9e-09
>AT1G64230.2 | Symbols: UBC28 | ubiquitin-conjugating enzyme,
putative | chr1:23833792-23835220 FORWARD
Length = 148
Score = 302 bits (774), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 144/148 (97%), Positives = 147/148 (99%)
Query: 8 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYTGGVFLVTIHFPPDY 67
MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP DSPY+GGVFLVTIHFPPDY
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60
Query: 68 PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 127
PFKPPKVAFRTKVFHPN+NSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61 PFKPPKVAFRTKVFHPNVNSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
Query: 128 PEIAHMYKTDRAKYEATARSWTQKYAMG 155
PEIAHMYKTDRAKYE+TARSWTQKYAMG
Sbjct: 121 PEIAHMYKTDRAKYESTARSWTQKYAMG 148
>AT1G64230.1 | Symbols: UBC28 | ubiquitin-conjugating enzyme,
putative | chr1:23833792-23835220 FORWARD
Length = 148
Score = 302 bits (774), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 144/148 (97%), Positives = 147/148 (99%)
Query: 8 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYTGGVFLVTIHFPPDY 67
MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP DSPY+GGVFLVTIHFPPDY
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60
Query: 68 PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 127
PFKPPKVAFRTKVFHPN+NSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61 PFKPPKVAFRTKVFHPNVNSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
Query: 128 PEIAHMYKTDRAKYEATARSWTQKYAMG 155
PEIAHMYKTDRAKYE+TARSWTQKYAMG
Sbjct: 121 PEIAHMYKTDRAKYESTARSWTQKYAMG 148
>AT5G41700.1 | Symbols: UBC8, ATUBC8 | UBC8 (UBIQUITIN CONJUGATING
ENZYME 8); protein binding / ubiquitin-protein ligase |
chr5:16676072-16677223 FORWARD
Length = 148
Score = 301 bits (772), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 144/148 (97%), Positives = 147/148 (99%)
Query: 8 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYTGGVFLVTIHFPPDY 67
MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP +SPY+GGVFLVTIHFPPDY
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDY 60
Query: 68 PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 127
PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61 PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
Query: 128 PEIAHMYKTDRAKYEATARSWTQKYAMG 155
PEIAHMYKTDRAKYEATAR+WTQKYAMG
Sbjct: 121 PEIAHMYKTDRAKYEATARNWTQKYAMG 148
>AT5G41700.2 | Symbols: UBC8, ATUBC8 | UBC8 (UBIQUITIN CONJUGATING
ENZYME 8); protein binding / ubiquitin-protein ligase |
chr5:16676072-16677223 FORWARD
Length = 148
Score = 301 bits (772), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 144/148 (97%), Positives = 147/148 (99%)
Query: 8 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYTGGVFLVTIHFPPDY 67
MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP +SPY+GGVFLVTIHFPPDY
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDY 60
Query: 68 PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 127
PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61 PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
Query: 128 PEIAHMYKTDRAKYEATARSWTQKYAMG 155
PEIAHMYKTDRAKYEATAR+WTQKYAMG
Sbjct: 121 PEIAHMYKTDRAKYEATARNWTQKYAMG 148
>AT4G27960.1 | Symbols: UBC9 | UBC9 (UBIQUITIN CONJUGATING ENZYME
9); ubiquitin-protein ligase | chr4:13916065-13917203
REVERSE
Length = 148
Score = 298 bits (764), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 142/148 (95%), Positives = 146/148 (98%)
Query: 8 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYTGGVFLVTIHFPPDY 67
MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP DSPY+GGVFLVTIHFPPDY
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60
Query: 68 PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 127
PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61 PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
Query: 128 PEIAHMYKTDRAKYEATARSWTQKYAMG 155
PEIAHMYKTD+ KYE+TAR+WTQKYAMG
Sbjct: 121 PEIAHMYKTDKNKYESTARTWTQKYAMG 148
>AT4G27960.2 | Symbols: UBC9 | UBC9 (UBIQUITIN CONJUGATING ENZYME
9); ubiquitin-protein ligase | chr4:13916065-13917293
REVERSE
Length = 178
Score = 298 bits (763), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 144/153 (94%), Positives = 148/153 (96%), Gaps = 1/153 (0%)
Query: 4 RG-FSMASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYTGGVFLVTIH 62
RG MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP DSPY+GGVFLVTIH
Sbjct: 26 RGILEMASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIH 85
Query: 63 FPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNP 122
FPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNP
Sbjct: 86 FPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNP 145
Query: 123 DDPLVPEIAHMYKTDRAKYEATARSWTQKYAMG 155
DDPLVPEIAHMYKTD+ KYE+TAR+WTQKYAMG
Sbjct: 146 DDPLVPEIAHMYKTDKNKYESTARTWTQKYAMG 178
>AT5G53300.2 | Symbols: UBC10 | UBC10 (ubiquitin-conjugating enzyme
10); ubiquitin-protein ligase | chr5:21632802-21633989
REVERSE
Length = 148
Score = 298 bits (762), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 142/148 (95%), Positives = 145/148 (97%)
Query: 8 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYTGGVFLVTIHFPPDY 67
MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP +SPY GGVFLVTIHFPPDY
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDY 60
Query: 68 PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 127
PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61 PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
Query: 128 PEIAHMYKTDRAKYEATARSWTQKYAMG 155
PEIAHMYKTD+ KYE+TARSWTQKYAMG
Sbjct: 121 PEIAHMYKTDKNKYESTARSWTQKYAMG 148
>AT5G53300.1 | Symbols: UBC10 | UBC10 (ubiquitin-conjugating enzyme
10); ubiquitin-protein ligase | chr5:21632802-21633989
REVERSE
Length = 148
Score = 298 bits (762), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 142/148 (95%), Positives = 145/148 (97%)
Query: 8 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYTGGVFLVTIHFPPDY 67
MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP +SPY GGVFLVTIHFPPDY
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDY 60
Query: 68 PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 127
PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61 PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
Query: 128 PEIAHMYKTDRAKYEATARSWTQKYAMG 155
PEIAHMYKTD+ KYE+TARSWTQKYAMG
Sbjct: 121 PEIAHMYKTDKNKYESTARSWTQKYAMG 148
>AT3G08690.1 | Symbols: UBC11, ATUBC11 | UBC11
(UBIQUITIN-CONJUGATING ENZYME 11); ubiquitin-protein
ligase | chr3:2641487-2642489 FORWARD
Length = 148
Score = 295 bits (755), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 138/148 (93%), Positives = 147/148 (99%)
Query: 8 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYTGGVFLVTIHFPPDY 67
MASKRILKELKDLQKDPP++CSAGPVAEDMFHWQATIMGPP+SPY GGVFLV+IHFPPDY
Sbjct: 1 MASKRILKELKDLQKDPPSNCSAGPVAEDMFHWQATIMGPPESPYAGGVFLVSIHFPPDY 60
Query: 68 PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 127
PFKPPKV+F+TKV+HPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61 PFKPPKVSFKTKVYHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
Query: 128 PEIAHMYKTDRAKYEATARSWTQKYAMG 155
PEIAHMYKTDR+KYE+TARSWTQKYAMG
Sbjct: 121 PEIAHMYKTDRSKYESTARSWTQKYAMG 148
>AT5G41700.4 | Symbols: UBC8, ATUBC8 | UBC8 (UBIQUITIN CONJUGATING
ENZYME 8); protein binding / ubiquitin-protein ligase |
chr5:16676072-16677223 FORWARD
Length = 149
Score = 294 bits (753), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 143/149 (95%), Positives = 146/149 (97%), Gaps = 1/149 (0%)
Query: 8 MASKRILKELKDLQKDPPTSC-SAGPVAEDMFHWQATIMGPPDSPYTGGVFLVTIHFPPD 66
MASKRILKELKDLQKDPPTSC AGPVAEDMFHWQATIMGP +SPY+GGVFLVTIHFPPD
Sbjct: 1 MASKRILKELKDLQKDPPTSCIFAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPD 60
Query: 67 YPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPL 126
YPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPL
Sbjct: 61 YPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPL 120
Query: 127 VPEIAHMYKTDRAKYEATARSWTQKYAMG 155
VPEIAHMYKTDRAKYEATAR+WTQKYAMG
Sbjct: 121 VPEIAHMYKTDRAKYEATARNWTQKYAMG 149
>AT1G64230.3 | Symbols: UBC28 | ubiquitin-conjugating enzyme,
putative | chr1:23833792-23835220 FORWARD
Length = 157
Score = 291 bits (744), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 143/157 (91%), Positives = 146/157 (92%), Gaps = 9/157 (5%)
Query: 8 MASKRILKELKDLQKDPPTSCSAG---------PVAEDMFHWQATIMGPPDSPYTGGVFL 58
MASKRILKELKDLQKDPPTSCSA PVAEDMFHWQATIMGP DSPY+GGVFL
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAEVSGHCYGTCPVAEDMFHWQATIMGPSDSPYSGGVFL 60
Query: 59 VTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLT 118
VTIHFPPDYPFKPPKVAFRTKVFHPN+NSNGSICLDILKEQWSPALTISKVLLSICSLLT
Sbjct: 61 VTIHFPPDYPFKPPKVAFRTKVFHPNVNSNGSICLDILKEQWSPALTISKVLLSICSLLT 120
Query: 119 DPNPDDPLVPEIAHMYKTDRAKYEATARSWTQKYAMG 155
DPNPDDPLVPEIAHMYKTDRAKYE+TARSWTQKYAMG
Sbjct: 121 DPNPDDPLVPEIAHMYKTDRAKYESTARSWTQKYAMG 157
>AT5G56150.2 | Symbols: UBC30 | UBC30 (ubiquitin-conjugating enzyme
30); ubiquitin-protein ligase | chr5:22729756-22730964
FORWARD
Length = 148
Score = 281 bits (719), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 131/148 (88%), Positives = 140/148 (94%)
Query: 8 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYTGGVFLVTIHFPPDY 67
MASKRI KEL+DLQ+DPP SCSAGP +DMF WQATIMGP DSP+ GGVFLVTIHFPPDY
Sbjct: 1 MASKRINKELRDLQRDPPVSCSAGPTGDDMFQWQATIMGPADSPFAGGVFLVTIHFPPDY 60
Query: 68 PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 127
PFKPPKVAFRTKV+HPNINSNGSICLDILKEQWSPALT+SKVLLSICSLLTDPNPDDPLV
Sbjct: 61 PFKPPKVAFRTKVYHPNINSNGSICLDILKEQWSPALTVSKVLLSICSLLTDPNPDDPLV 120
Query: 128 PEIAHMYKTDRAKYEATARSWTQKYAMG 155
PEIAH+YKTDR KYE+TA+SWTQKYAMG
Sbjct: 121 PEIAHIYKTDRVKYESTAQSWTQKYAMG 148
>AT5G56150.1 | Symbols: UBC30 | UBC30 (ubiquitin-conjugating enzyme
30); ubiquitin-protein ligase | chr5:22729756-22730964
FORWARD
Length = 148
Score = 281 bits (719), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 131/148 (88%), Positives = 140/148 (94%)
Query: 8 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYTGGVFLVTIHFPPDY 67
MASKRI KEL+DLQ+DPP SCSAGP +DMF WQATIMGP DSP+ GGVFLVTIHFPPDY
Sbjct: 1 MASKRINKELRDLQRDPPVSCSAGPTGDDMFQWQATIMGPADSPFAGGVFLVTIHFPPDY 60
Query: 68 PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 127
PFKPPKVAFRTKV+HPNINSNGSICLDILKEQWSPALT+SKVLLSICSLLTDPNPDDPLV
Sbjct: 61 PFKPPKVAFRTKVYHPNINSNGSICLDILKEQWSPALTVSKVLLSICSLLTDPNPDDPLV 120
Query: 128 PEIAHMYKTDRAKYEATARSWTQKYAMG 155
PEIAH+YKTDR KYE+TA+SWTQKYAMG
Sbjct: 121 PEIAHIYKTDRVKYESTAQSWTQKYAMG 148
>AT1G64230.4 | Symbols: UBC28 | ubiquitin-conjugating enzyme,
putative | chr1:23833792-23835220 FORWARD
Length = 190
Score = 280 bits (717), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 143/190 (75%), Positives = 146/190 (76%), Gaps = 42/190 (22%)
Query: 8 MASKRILKELKDLQKDPPTSCSA------------------------------------- 30
MASKRILKELKDLQKDPPTSCSA
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAVDNASKLLVLIELEDCCRRFSNCSCILLLEKSQDIAM 60
Query: 31 -----GPVAEDMFHWQATIMGPPDSPYTGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNI 85
PVAEDMFHWQATIMGP DSPY+GGVFLVTIHFPPDYPFKPPKVAFRTKVFHPN+
Sbjct: 61 AHVLLCPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNV 120
Query: 86 NSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYEATA 145
NSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYE+TA
Sbjct: 121 NSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYESTA 180
Query: 146 RSWTQKYAMG 155
RSWTQKYAMG
Sbjct: 181 RSWTQKYAMG 190
>AT2G16740.1 | Symbols: UBC29 | UBC29 (ubiquitin-conjugating enzyme
29); ubiquitin-protein ligase | chr2:7267880-7268737
FORWARD
Length = 148
Score = 276 bits (707), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 128/147 (87%), Positives = 139/147 (94%)
Query: 8 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYTGGVFLVTIHFPPDY 67
MA++RILKELK+LQ+DPP SCSAGP EDMFHWQATIMGP +SPY+GGVFLV IHFPPDY
Sbjct: 1 MATRRILKELKELQRDPPVSCSAGPTGEDMFHWQATIMGPNESPYSGGVFLVNIHFPPDY 60
Query: 68 PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 127
PFKPPKV FRTKVFHPNINSNG+ICLDILK+QWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61 PFKPPKVVFRTKVFHPNINSNGNICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLV 120
Query: 128 PEIAHMYKTDRAKYEATARSWTQKYAM 154
PEIAH+YKTD+ KYEA ARSWTQKYA+
Sbjct: 121 PEIAHIYKTDKTKYEAMARSWTQKYAL 147
>AT3G08700.1 | Symbols: UBC12 | UBC12 (ubiquitin-conjugating enzyme
12); small conjugating protein ligase/ ubiquitin-protein
ligase | chr3:2643482-2644545 FORWARD
Length = 149
Score = 249 bits (636), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 117/149 (78%), Positives = 134/149 (89%), Gaps = 1/149 (0%)
Query: 8 MASKRILKELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPPDSPYTGGVFLVTIHFPPD 66
MASKRI +EL+D+Q+ PP +CSAGPVAE D+FHWQATIMGP DSPY+GGVF V+I F D
Sbjct: 1 MASKRISRELRDMQRHPPANCSAGPVAEEDIFHWQATIMGPHDSPYSGGVFTVSIDFSSD 60
Query: 67 YPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPL 126
YPFKPPKV F+TKV+HPNI+S GSICLDILKEQWSPA T SKVLLSICSLLTDPNP+DPL
Sbjct: 61 YPFKPPKVNFKTKVYHPNIDSKGSICLDILKEQWSPAPTTSKVLLSICSLLTDPNPNDPL 120
Query: 127 VPEIAHMYKTDRAKYEATARSWTQKYAMG 155
VPEIAH+YK D++KYE+TA+ WTQKYAMG
Sbjct: 121 VPEIAHLYKVDKSKYESTAQKWTQKYAMG 149
>AT5G41700.3 | Symbols: UBC8, ATUBC8 | UBC8 (UBIQUITIN CONJUGATING
ENZYME 8); protein binding / ubiquitin-protein ligase |
chr5:16676072-16677021 FORWARD
Length = 145
Score = 213 bits (541), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 100/104 (96%), Positives = 102/104 (98%)
Query: 8 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYTGGVFLVTIHFPPDY 67
MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP +SPY+GGVFLVTIHFPPDY
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDY 60
Query: 68 PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLL 111
PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKV L
Sbjct: 61 PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVTL 104
>AT5G53300.3 | Symbols: | UBC10 (ubiquitin-conjugating enzyme 10);
ubiquitin-protein ligase | chr5:21633187-21633989
REVERSE
Length = 109
Score = 208 bits (529), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 102/109 (93%), Positives = 103/109 (94%), Gaps = 2/109 (1%)
Query: 8 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYTGGVFLVTIHFPPDY 67
MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP +SPY GGVFLVTIHFPPDY
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDY 60
Query: 68 PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKV--LLSIC 114
PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKV LL C
Sbjct: 61 PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVRFLLFFC 109
>AT3G13550.1 | Symbols: FUS9, EMB144, COP10, CIN4 | FUS9 (FUSCA 9);
protein binding / ubiquitin-protein ligase |
chr3:4423569-4424797 REVERSE
Length = 182
Score = 166 bits (420), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 71/147 (48%), Positives = 106/147 (72%)
Query: 7 SMASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYTGGVFLVTIHFPPD 66
S + KRI +E+ +L DPP CSAGP ++++HW ATI+GP +PY GG+F + I FP D
Sbjct: 35 SASGKRIQREMAELNIDPPPDCSAGPKGDNLYHWIATIIGPSGTPYEGGIFFLDIIFPSD 94
Query: 67 YPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPL 126
YPFKPPK+ F+T+++H N+++ G + ++IL++ WSPALTI+KVL +I S+ P P P
Sbjct: 95 YPFKPPKLVFKTRIYHCNVDTAGDLSVNILRDSWSPALTITKVLQAIRSIFLKPEPYSPA 154
Query: 127 VPEIAHMYKTDRAKYEATARSWTQKYA 153
+P IA +Y TDR K++ A+ WT ++A
Sbjct: 155 LPVIARLYLTDREKHDEVAKEWTLRFA 181
>AT1G16890.2 | Symbols: UBC36, UBC13B | ubiquitin-conjugating
enzyme, putative | chr1:5776550-5778327 REVERSE
Length = 153
Score = 154 bits (388), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 73/145 (50%), Positives = 97/145 (66%)
Query: 11 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYTGGVFLVTIHFPPDYPFK 70
+RI+KE + L +P SA P E+M ++ I+GP SPY GGVF + + P +YP
Sbjct: 8 RRIIKETQRLLSEPAPGISASPSEENMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMA 67
Query: 71 PPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEI 130
PKV F TK++HPNI+ G ICLDILK++WSPAL I VLLSI +LL+ PNPDDPL I
Sbjct: 68 APKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENI 127
Query: 131 AHMYKTDRAKYEATARSWTQKYAMG 155
A +K++ A+ TA+ WT+ YA G
Sbjct: 128 AKHWKSNEAEAVETAKEWTRLYASG 152
>AT1G78870.2 | Symbols: UBC35, UBC13A | UBC35 (UBIQUITIN-CONJUGATING
ENZYME 35); protein binding / ubiquitin-protein ligase |
chr1:29650589-29652203 FORWARD
Length = 153
Score = 151 bits (381), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 72/145 (49%), Positives = 97/145 (66%)
Query: 11 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYTGGVFLVTIHFPPDYPFK 70
+RI+KE + L +P SA P ++M ++ I+GP SPY GGVF + + P +YP
Sbjct: 8 RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMA 67
Query: 71 PPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEI 130
PKV F TK++HPNI+ G ICLDILK++WSPAL I VLLSI +LL+ PNPDDPL I
Sbjct: 68 APKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENI 127
Query: 131 AHMYKTDRAKYEATARSWTQKYAMG 155
A +K++ A+ TA+ WT+ YA G
Sbjct: 128 AKHWKSNEAEAVDTAKEWTRLYASG 152
>AT5G62540.1 | Symbols: UBC3 | UBC3 (ubiquitin-conjugating enzyme
3); ubiquitin-protein ligase | chr5:25104679-25105465
FORWARD
Length = 150
Score = 147 bits (370), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 67/133 (50%), Positives = 89/133 (66%)
Query: 9 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYTGGVFLVTIHFPPDYP 68
A KR++ + K LQKDPP S P ++ HW A I GP D+P+ GG F +T+HF DYP
Sbjct: 5 AKKRLMWDFKRLQKDPPVGISGAPQDNNIMHWNALIFGPEDTPWDGGTFKLTLHFTEDYP 64
Query: 69 FKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 128
KPP V F +++FHPNI ++GSICLDIL+ QWSP ++ VL SI SLL DPNPD P
Sbjct: 65 NKPPIVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAVLTSIQSLLCDPNPDSPANA 124
Query: 129 EIAHMYKTDRAKY 141
E A ++ ++ +Y
Sbjct: 125 EAARLFSENKREY 137
>AT1G78870.1 | Symbols: UBC35, UBC13A | UBC35 (UBIQUITIN-CONJUGATING
ENZYME 35); protein binding / ubiquitin-protein ligase |
chr1:29650589-29652203 FORWARD
Length = 154
Score = 146 bits (369), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 72/146 (49%), Positives = 97/146 (66%), Gaps = 1/146 (0%)
Query: 11 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYTG-GVFLVTIHFPPDYPF 69
+RI+KE + L +P SA P ++M ++ I+GP SPY G GVF + + P +YP
Sbjct: 8 RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGRGVFKLELFLPEEYPM 67
Query: 70 KPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPE 129
PKV F TK++HPNI+ G ICLDILK++WSPAL I VLLSI +LL+ PNPDDPL
Sbjct: 68 AAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSEN 127
Query: 130 IAHMYKTDRAKYEATARSWTQKYAMG 155
IA +K++ A+ TA+ WT+ YA G
Sbjct: 128 IAKHWKSNEAEAVDTAKEWTRLYASG 153
>AT1G14400.2 | Symbols: UBC1, ATUBC1 | UBC1 (UBIQUITIN CARRIER
PROTEIN 1); ubiquitin-protein ligase |
chr1:4927294-4928136 REVERSE
Length = 152
Score = 144 bits (364), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 67/146 (45%), Positives = 91/146 (62%), Gaps = 5/146 (3%)
Query: 9 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYTGGVFLVTIHFPPDYP 68
A KR++++ K LQ+DPP S P ++ W A I GP D+P+ GG F +++ F DYP
Sbjct: 5 ARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYP 64
Query: 69 FKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 128
KPP V F +++FHPNI ++GSICLDIL+ QWSP ++ +L SI SLL DPNP+ P
Sbjct: 65 NKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANS 124
Query: 129 EIAHMYKTDRAKYEATAR-----SWT 149
E A MY + +Y R SWT
Sbjct: 125 EAARMYSESKREYNRRVRDVVEQSWT 150
>AT1G14400.1 | Symbols: UBC1, ATUBC1 | UBC1 (UBIQUITIN CARRIER
PROTEIN 1); ubiquitin-protein ligase |
chr1:4927294-4928136 REVERSE
Length = 152
Score = 144 bits (364), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 67/146 (45%), Positives = 91/146 (62%), Gaps = 5/146 (3%)
Query: 9 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYTGGVFLVTIHFPPDYP 68
A KR++++ K LQ+DPP S P ++ W A I GP D+P+ GG F +++ F DYP
Sbjct: 5 ARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYP 64
Query: 69 FKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 128
KPP V F +++FHPNI ++GSICLDIL+ QWSP ++ +L SI SLL DPNP+ P
Sbjct: 65 NKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANS 124
Query: 129 EIAHMYKTDRAKYEATAR-----SWT 149
E A MY + +Y R SWT
Sbjct: 125 EAARMYSESKREYNRRVRDVVEQSWT 150
>AT1G36340.1 | Symbols: UBC31 | UBC31 (ubiquitin-conjugating enzyme
31); small conjugating protein ligase/ ubiquitin-protein
ligase | chr1:13683791-13684924 REVERSE
Length = 154
Score = 144 bits (362), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 70/145 (48%), Positives = 101/145 (69%), Gaps = 1/145 (0%)
Query: 9 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYTGGVFLVTIHFPPDYP 68
A++RI E + + + S G + +++ W A I GP +PY GG+F ++I FP DYP
Sbjct: 9 AAQRIAMEYRAMISKE-SLFSIGQNSNNIYEWTAVIRGPDGTPYEGGMFNLSIKFPTDYP 67
Query: 69 FKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 128
FKPPK F+T ++HPNIN GSIC++ILK++W+PAL + KVLLSI LL PNPDDPLVP
Sbjct: 68 FKPPKFTFKTPIYHPNINDEGSICMNILKDKWTPALMVEKVLLSILLLLEKPNPDDPLVP 127
Query: 129 EIAHMYKTDRAKYEATARSWTQKYA 153
EI ++K +R +++ AR +T ++A
Sbjct: 128 EIGQLFKNNRFQFDQRAREFTARHA 152
>AT2G02760.1 | Symbols: ATUBC2, UBC2 | ATUBC2
(UBIQUITING-CONJUGATING ENZYME 2); ubiquitin-protein
ligase | chr2:774271-775149 FORWARD
Length = 152
Score = 144 bits (362), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 66/146 (45%), Positives = 92/146 (63%), Gaps = 5/146 (3%)
Query: 9 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYTGGVFLVTIHFPPDYP 68
A KR++++ K LQ+DPP S P ++ W A I GP D+P+ GG F +++ F DYP
Sbjct: 5 ARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYP 64
Query: 69 FKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 128
KPP V F +++FHPNI ++GSICLDIL+ QWSP ++ +L SI SLL DPNP+ P
Sbjct: 65 NKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANS 124
Query: 129 EIAHMYKTDRAKY-----EATARSWT 149
E A M+ + +Y E +SWT
Sbjct: 125 EAARMFSESKREYNRRVREVVEQSWT 150
>AT3G13550.2 | Symbols: FUS9, EMB144, COP10, CIN4 | FUS9 (FUSCA 9);
protein binding / ubiquitin-protein ligase |
chr3:4423828-4424797 REVERSE
Length = 170
Score = 137 bits (346), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 58/116 (50%), Positives = 86/116 (74%)
Query: 7 SMASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYTGGVFLVTIHFPPD 66
S + KRI +E+ +L DPP CSAGP ++++HW ATI+GP +PY GG+F + I FP D
Sbjct: 35 SASGKRIQREMAELNIDPPPDCSAGPKGDNLYHWIATIIGPSGTPYEGGIFFLDIIFPSD 94
Query: 67 YPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNP 122
YPFKPPK+ F+T+++H N+++ G + ++IL++ WSPALTI+KVL +I S+ P P
Sbjct: 95 YPFKPPKLVFKTRIYHCNVDTAGDLSVNILRDSWSPALTITKVLQAIRSIFLKPEP 150
>AT1G16890.1 | Symbols: UBC36, UBC13B | ubiquitin-conjugating
enzyme, putative | chr1:5776550-5777903 REVERSE
Length = 120
Score = 134 bits (337), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 63/119 (52%), Positives = 82/119 (68%)
Query: 37 MFHWQATIMGPPDSPYTGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL 96
M ++ I+GP SPY GGVF + + P +YP PKV F TK++HPNI+ G ICLDIL
Sbjct: 1 MRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDIL 60
Query: 97 KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYEATARSWTQKYAMG 155
K++WSPAL I VLLSI +LL+ PNPDDPL IA +K++ A+ TA+ WT+ YA G
Sbjct: 61 KDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAVETAKEWTRLYASG 119
>AT5G50870.1 | Symbols: UBC27 | UBC27 (ubiquitin-conjugating enzyme
27); ubiquitin-protein ligase | chr5:20699626-20700998
REVERSE
Length = 192
Score = 130 bits (327), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 66/144 (45%), Positives = 94/144 (65%), Gaps = 2/144 (1%)
Query: 12 RILKELKDLQKDPPTS-CSAGPVAEDMFHWQATIMGPPDSPYTGGVFLVTIHFPPDYPFK 70
RI KEL+D +++ +S P ++++ TI GP +PY GG F + I P YPF+
Sbjct: 6 RIQKELQDCERNQDSSGIRVCPKSDNLTRLTGTIPGPIGTPYEGGTFQIDITMPDGYPFE 65
Query: 71 PPKVAFRTKVFHPNINS-NGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPE 129
PPK+ F TKV+HPNI+S +G+ICLDILK+QWSPALT+ L+SI +LL+ P P DP
Sbjct: 66 PPKMQFSTKVWHPNISSQSGAICLDILKDQWSPALTLKTALVSIQALLSAPEPKDPQDAV 125
Query: 130 IAHMYKTDRAKYEATARSWTQKYA 153
+A Y + + +TAR WT+ +A
Sbjct: 126 VAEQYMKNYQVFVSTARYWTETFA 149
>AT3G24515.1 | Symbols: UBC37 | UBC37 (ubiquitin-conjugating enzyme
37); small conjugating protein ligase/ ubiquitin-protein
ligase | chr3:8934569-8936207 REVERSE
Length = 409
Score = 124 bits (312), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 68/155 (43%), Positives = 92/155 (59%), Gaps = 13/155 (8%)
Query: 12 RILKELKDLQKDPPTSCS------AGPVAEDMFHWQ---ATIMGPPDSPYTGGVFLVTIH 62
R+ KELK L DPP S A + D + A I GP D+ Y G+F + I
Sbjct: 10 RMQKELKLLLSDPPHGASFPHLSSAANGSGDFSTFSTIDAQIEGPEDTVYANGIFNLKIQ 69
Query: 63 FPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL----KEQWSPALTISKVLLSICSLLT 118
P YPF+PP V+F T ++HPNI+++G ICLDIL K W P+L IS VL S+ LL+
Sbjct: 70 IPERYPFQPPIVSFATPIYHPNIDNSGRICLDILNLPPKGAWQPSLNISTVLTSMRLLLS 129
Query: 119 DPNPDDPLVPEIAHMYKTDRAKYEATARSWTQKYA 153
+PNPDD L+ E++ YK +R ++ AR T+KYA
Sbjct: 130 EPNPDDGLMCEVSREYKYNRQTFDYKAREMTEKYA 164
>AT2G32790.1 | Symbols: | ubiquitin-conjugating enzyme, putative |
chr2:13905649-13906271 REVERSE
Length = 177
Score = 121 bits (304), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 74/152 (48%), Positives = 98/152 (64%), Gaps = 9/152 (5%)
Query: 9 ASKRILKELKDLQKDPPTSC---SAGPVAEDMFHWQATIMGPPDSPYTGGVFLVTIHFPP 65
A R+ KE ++ KD S P E++F W+AT+ GP PY GVF V++H PP
Sbjct: 30 AENRLWKEFQE--KDDVLKIHVRSWLPSPENIFRWEATVNGPVGCPYEKGVFTVSVHIPP 87
Query: 66 DYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDP 125
YP++PPK+ F+TK+FHPNI+ G I +DIL +WS ALTI+ VLLSICS+L+ NP +P
Sbjct: 88 KYPYEPPKITFKTKIFHPNISEIGEIFVDILGSRWSSALTINLVLLSICSILS--NPVEP 145
Query: 126 LV--PEIAHMYKTDRAKYEATARSWTQKYAMG 155
L+ A +Y+ DR YE AR WT KYA G
Sbjct: 146 LLVSNHAARLYQKDRKAYEKVAREWTLKYAKG 177
>AT5G25760.2 | Symbols: PEX4 | PEX4 (PEROXIN4); protein binding /
ubiquitin-protein ligase | chr5:8967983-8969173 FORWARD
Length = 157
Score = 111 bits (277), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/147 (38%), Positives = 87/147 (59%), Gaps = 4/147 (2%)
Query: 12 RILKELKDLQKDPPTSCSAGPVAED--MFHWQATIMGPPDSPYTGGVFLVTIHFPPDYPF 69
R+ KE K++Q++ + +D +F W A I GP ++PY GGVF + P YP
Sbjct: 7 RLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPEPYPL 66
Query: 70 KPPKVAFRTKVFHPNIN-SNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 128
+PP+V F TK+FHPN++ G ICLDILK WSPA T+ V +I +L+ P PD PL
Sbjct: 67 QPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNC 126
Query: 129 EIAHMYKT-DRAKYEATARSWTQKYAM 154
+ ++ ++ D + + A+ +T+ AM
Sbjct: 127 DSGNLLRSGDVRGFNSMAQMYTRLAAM 153
>AT5G25760.1 | Symbols: PEX4, UBC21 | PEX4 (PEROXIN4); protein
binding / ubiquitin-protein ligase |
chr5:8967983-8969173 FORWARD
Length = 157
Score = 111 bits (277), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/147 (38%), Positives = 87/147 (59%), Gaps = 4/147 (2%)
Query: 12 RILKELKDLQKDPPTSCSAGPVAED--MFHWQATIMGPPDSPYTGGVFLVTIHFPPDYPF 69
R+ KE K++Q++ + +D +F W A I GP ++PY GGVF + P YP
Sbjct: 7 RLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPEPYPL 66
Query: 70 KPPKVAFRTKVFHPNIN-SNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 128
+PP+V F TK+FHPN++ G ICLDILK WSPA T+ V +I +L+ P PD PL
Sbjct: 67 QPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNC 126
Query: 129 EIAHMYKT-DRAKYEATARSWTQKYAM 154
+ ++ ++ D + + A+ +T+ AM
Sbjct: 127 DSGNLLRSGDVRGFNSMAQMYTRLAAM 153
>AT1G78870.3 | Symbols: UBC35, UBC13A | UBC35 (UBIQUITIN-CONJUGATING
ENZYME 35); protein binding / ubiquitin-protein ligase |
chr1:29650589-29651858 FORWARD
Length = 112
Score = 110 bits (275), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 51/105 (48%), Positives = 68/105 (64%)
Query: 11 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYTGGVFLVTIHFPPDYPFK 70
+RI+KE + L +P SA P ++M ++ I+GP SPY GGVF + + P +YP
Sbjct: 8 RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMA 67
Query: 71 PPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICS 115
PKV F TK++HPNI+ G ICLDILK++WSPAL I VLL S
Sbjct: 68 APKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLRYMS 112
>AT3G20060.1 | Symbols: UBC19 | UBC19 (ubiquitin-conjugating
enzyme19); ubiquitin-protein ligase |
chr3:7002927-7004283 REVERSE
Length = 181
Score = 107 bits (266), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 75/128 (58%)
Query: 11 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYTGGVFLVTIHFPPDYPFK 70
KR+ EL L SA P +++F W+ TI G D+ + G + +++ F DYPFK
Sbjct: 39 KRLQSELMGLMMGADPGISAFPEEDNIFCWKGTITGSKDTVFEGTEYRLSLTFSNDYPFK 98
Query: 71 PPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEI 130
PKV F T FHPN++ G+ICLDIL+++WS A + +LLSI SLL +PN PL +
Sbjct: 99 SPKVKFETCCFHPNVDLYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNNQA 158
Query: 131 AHMYKTDR 138
A ++
Sbjct: 159 AQLWSNQE 166
>AT1G50490.1 | Symbols: UBC20 | UBC20 (ubiquitin-conjugating enzyme
20); ubiquitin-protein ligase | chr1:18705005-18706303
REVERSE
Length = 180
Score = 105 bits (263), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 76/128 (59%)
Query: 11 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYTGGVFLVTIHFPPDYPFK 70
KR+ EL L SA P +++F W+ TI G D+ + G + +++ F DYPFK
Sbjct: 38 KRLQSELMGLMMGGGPGISAFPEEDNIFCWKGTITGSKDTVFEGTEYRLSLSFSNDYPFK 97
Query: 71 PPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEI 130
PPKV F T FHPN++ G+ICLDIL+++WS A + +LLSI SLL +PN PL +
Sbjct: 98 PPKVKFETCCFHPNVDVYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQA 157
Query: 131 AHMYKTDR 138
A ++
Sbjct: 158 AQLWSNQE 165
>AT3G55380.1 | Symbols: UBC14 | UBC14 (ubiquitin-conjugating enzyme
14); ubiquitin-protein ligase | chr3:20531520-20532895
FORWARD
Length = 167
Score = 104 bits (259), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 78/134 (58%), Gaps = 14/134 (10%)
Query: 22 KDPPTSCSAGPVAE-DMFHWQATIMGPPDSPYTGGVFLVTIHFPPDYPFKPPKVAFRTKV 80
K P SAG V E ++F W +IMGPPD+ Y GG F + FP +YP PP V F +++
Sbjct: 19 KKPVDGFSAGLVDEKNVFQWSVSIMGPPDTLYEGGFFNAIMSFPENYPVSPPTVTFTSEM 78
Query: 81 FHPNINSNGSICLDIL-------------KEQWSPALTISKVLLSICSLLTDPNPDDPLV 127
+HPN+ S+G +C+ IL E+W+P T+ ++LSI S+L+ PN + P
Sbjct: 79 WHPNVYSDGKVCISILHPPGDDPHGYELASERWTPVHTVESIVLSIISMLSGPNDESPAN 138
Query: 128 PEIAHMYKTDRAKY 141
E A ++ +RA++
Sbjct: 139 VEAAKEWRDNRAEF 152
>AT2G46030.1 | Symbols: UBC6 | UBC6 (ubiquitin-conjugating enzyme
6); ubiquitin-protein ligase | chr2:18932243-18933421
REVERSE
Length = 183
Score = 103 bits (256), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 81/148 (54%), Gaps = 3/148 (2%)
Query: 8 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYTGGVFLVTIHFPPDY 67
MAS +E+ D+ K + V +D+ + T GP DS Y GGV+ + + P Y
Sbjct: 1 MASPSKRREM-DMMKLMMSDYKVDTVNDDLQMFYVTFHGPTDSLYQGGVWKIKVELPEAY 59
Query: 68 PFKPPKVAFRTKVFHPNIN-SNGSICLDILKEQWSPALTISKVLLSIC-SLLTDPNPDDP 125
P+K P V F K++HPN++ S+G++CLD++ + WSP + V S LL PNP DP
Sbjct: 60 PYKSPSVGFVNKIYHPNVDESSGAVCLDVINQTWSPMFDLINVFESFLPQLLLYPNPSDP 119
Query: 126 LVPEIAHMYKTDRAKYEATARSWTQKYA 153
E A + DRA YE + + +KYA
Sbjct: 120 FNGEAASLLMRDRAAYELKVKEYCEKYA 147
>AT3G20060.2 | Symbols: UBC19 | UBC19 (ubiquitin-conjugating
enzyme19); ubiquitin-protein ligase |
chr3:7002927-7003727 REVERSE
Length = 136
Score = 102 bits (254), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 69/110 (62%)
Query: 29 SAGPVAEDMFHWQATIMGPPDSPYTGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSN 88
SA P +++F W+ TI G D+ + G + +++ F DYPFK PKV F T FHPN++
Sbjct: 12 SAFPEEDNIFCWKGTITGSKDTVFEGTEYRLSLTFSNDYPFKSPKVKFETCCFHPNVDLY 71
Query: 89 GSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDR 138
G+ICLDIL+++WS A + +LLSI SLL +PN PL + A ++
Sbjct: 72 GNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNNQAAQLWSNQE 121
>AT3G57870.1 | Symbols: AHUS5, EMB1637, SCE1, SCE1A, ATSCE1 | SCE1
(SUMO CONJUGATION ENZYME 1); SUMO ligase |
chr3:21428831-21430110 REVERSE
Length = 160
Score = 100 bits (250), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 82/153 (53%), Gaps = 7/153 (4%)
Query: 7 SMASKRILKELKDLQKDPPTSCSAGPVAE-----DMFHWQATIMGPPDSPYTGGVFLVTI 61
+A R+ +E K +K+ P A P ++ W TI G + + GG F +T+
Sbjct: 4 GIARGRLAEERKSWRKNHPHGFVAKPETGQDGTVNLMVWHCTIPGKAGTDWEGGFFPLTM 63
Query: 62 HFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ--WSPALTISKVLLSICSLLTD 119
HF DYP KPPK F FHPN+ +G++CL IL E W PA+T+ ++L+ I LL
Sbjct: 64 HFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDYGWRPAITVKQILVGIQDLLDT 123
Query: 120 PNPDDPLVPEIAHMYKTDRAKYEATARSWTQKY 152
PNP DP + H++ D +Y+ + +++Y
Sbjct: 124 PNPADPAQTDGYHLFCQDPVEYKKRVKLQSKQY 156
>AT5G05080.2 | Symbols: UBC22 | UBC22 (ubiquitin-conjugating enzyme
22); ubiquitin-protein ligase | chr5:1498727-1499972
REVERSE
Length = 251
Score = 100 bits (249), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 77/143 (53%)
Query: 11 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYTGGVFLVTIHFPPDYPFK 70
K++ KELK L + PP ED A I GP +PY G+F + + D+P
Sbjct: 13 KQLAKELKSLDESPPDGIKVVVNDEDFSQICADIEGPVGTPYENGLFRMKLALSHDFPHS 72
Query: 71 PPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEI 130
PPK F TK+FHPN+ SNG IC++ LK+ W+P+L + VL + LL +P P+ L +
Sbjct: 73 PPKGYFMTKIFHPNVASNGEICVNTLKKDWNPSLGLRHVLSVVRCLLIEPFPESALNEQA 132
Query: 131 AHMYKTDRAKYEATARSWTQKYA 153
M + +Y AR +T +A
Sbjct: 133 GKMLLENYDEYARHARLYTGIHA 155
>AT5G05080.1 | Symbols: UBC22 | UBC22 (ubiquitin-conjugating enzyme
22); ubiquitin-protein ligase | chr5:1498727-1499972
REVERSE
Length = 251
Score = 100 bits (249), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 77/143 (53%)
Query: 11 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYTGGVFLVTIHFPPDYPFK 70
K++ KELK L + PP ED A I GP +PY G+F + + D+P
Sbjct: 13 KQLAKELKSLDESPPDGIKVVVNDEDFSQICADIEGPVGTPYENGLFRMKLALSHDFPHS 72
Query: 71 PPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEI 130
PPK F TK+FHPN+ SNG IC++ LK+ W+P+L + VL + LL +P P+ L +
Sbjct: 73 PPKGYFMTKIFHPNVASNGEICVNTLKKDWNPSLGLRHVLSVVRCLLIEPFPESALNEQA 132
Query: 131 AHMYKTDRAKYEATARSWTQKYA 153
M + +Y AR +T +A
Sbjct: 133 GKMLLENYDEYARHARLYTGIHA 155
>AT5G41340.1 | Symbols: UBC4, ATUBC4 | UBC4 (UBIQUITIN CONJUGATING
ENZYME 4); ubiquitin-protein ligase |
chr5:16538296-16539956 REVERSE
Length = 187
Score = 98.2 bits (243), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 69/123 (56%), Gaps = 2/123 (1%)
Query: 33 VAEDMFHWQATIMGPPDSPYTGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS-NGSI 91
+ + M + GP DS Y GGV+ + + P YP+K P V F TK++HPN++ +GS+
Sbjct: 25 INDGMQEFYVEFNGPKDSLYQGGVWKIRVELPDAYPYKSPSVGFITKIYHPNVDELSGSV 84
Query: 92 CLDILKEQWSPALTISKVLLSIC-SLLTDPNPDDPLVPEIAHMYKTDRAKYEATARSWTQ 150
CLD++ + WSP + V + LL PNP DPL E A + DR YE + + +
Sbjct: 85 CLDVINQTWSPMFDLVNVFETFLPQLLLYPNPSDPLNGEAAALMMRDRPAYEQRVKEYCE 144
Query: 151 KYA 153
KYA
Sbjct: 145 KYA 147
>AT1G63800.1 | Symbols: UBC5 | UBC5 (ubiquitin-conjugating enzyme
5); ubiquitin-protein ligase | chr1:23667888-23669003
REVERSE
Length = 185
Score = 97.8 bits (242), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 69/123 (56%), Gaps = 2/123 (1%)
Query: 33 VAEDMFHWQATIMGPPDSPYTGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS-NGSI 91
+ + M + GP DS Y GGV+ + + P YP+K P V F TK++HPN++ +GS+
Sbjct: 25 INDGMQEFFVEFSGPKDSIYEGGVWKIRVELPDAYPYKSPSVGFITKIYHPNVDEMSGSV 84
Query: 92 CLDILKEQWSPALTISKVLLSIC-SLLTDPNPDDPLVPEIAHMYKTDRAKYEATARSWTQ 150
CLD++ + WSP + V + LL PNP DPL E A + DR YE + + +
Sbjct: 85 CLDVINQTWSPMFDLVNVFETFLPQLLLYPNPSDPLNGEAAALMMRDRPTYEQRVKEYCE 144
Query: 151 KYA 153
KYA
Sbjct: 145 KYA 147
>AT3G46460.1 | Symbols: UBC13 | UBC13 (ubiquitin-conjugating enzyme
13); ubiquitin-protein ligase | chr3:17096120-17097315
REVERSE
Length = 166
Score = 97.8 bits (242), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 77/144 (53%), Gaps = 14/144 (9%)
Query: 22 KDPPTSCSAGPVAE-DMFHWQATIMGPPDSPYTGGVFLVTIHFPPDYPFKPPKVAFRTKV 80
K P SAG V E ++F W TI+GPPD+ Y GG F + FP +YP PP V F + +
Sbjct: 18 KHPVDGFSAGLVDEKNIFEWSVTIIGPPDTLYEGGFFYAIMSFPQNYPNSPPTVRFTSDI 77
Query: 81 FHPNINSNGSICLDIL-------------KEQWSPALTISKVLLSICSLLTDPNPDDPLV 127
+HPN+ +G +C+ IL E+W+P T+ ++LSI S+L+ PN + P
Sbjct: 78 WHPNVYPDGRVCISILHPPGDDPSGYELASERWTPVHTVESIMLSIISMLSGPNDESPAN 137
Query: 128 PEIAHMYKTDRAKYEATARSWTQK 151
E A ++ R +++ +K
Sbjct: 138 VEAAKEWREKRDEFKKKVSRCVRK 161
>AT4G36800.2 | Symbols: RCE1 | RCE1 (RUB1 CONJUGATING ENZYME 1);
NEDD8 ligase/ small conjugating protein ligase |
chr4:17341237-17342148 REVERSE
Length = 184
Score = 96.7 bits (239), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 83/150 (55%), Gaps = 9/150 (6%)
Query: 4 RGFSMASKRILKELKDLQKDP-----PTSCSAG--PVAEDMFHWQATIMGPPDSPYTGGV 56
RG + K+ EL+ L KD P+SCS +D+ +++ +I P D Y G
Sbjct: 20 RGGASVKKQSAGELR-LHKDISELNLPSSCSISFPNGKDDLMNFEVSIK-PDDGYYHNGT 77
Query: 57 FLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSL 116
F+ T P YP + PKV +TKV+HPNI+ G++CL+IL+E W P L I+ V+ + L
Sbjct: 78 FVFTFQVSPVYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIYGLFHL 137
Query: 117 LTDPNPDDPLVPEIAHMYKTDRAKYEATAR 146
T+PN +DPL + A + + + +E R
Sbjct: 138 FTEPNSEDPLNHDAAAVLRDNPKLFETNVR 167
>AT4G36800.1 | Symbols: RCE1 | RCE1 (RUB1 CONJUGATING ENZYME 1);
NEDD8 ligase/ small conjugating protein ligase |
chr4:17341237-17342148 REVERSE
Length = 184
Score = 96.7 bits (239), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 83/150 (55%), Gaps = 9/150 (6%)
Query: 4 RGFSMASKRILKELKDLQKDP-----PTSCSAG--PVAEDMFHWQATIMGPPDSPYTGGV 56
RG + K+ EL+ L KD P+SCS +D+ +++ +I P D Y G
Sbjct: 20 RGGASVKKQSAGELR-LHKDISELNLPSSCSISFPNGKDDLMNFEVSIK-PDDGYYHNGT 77
Query: 57 FLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSL 116
F+ T P YP + PKV +TKV+HPNI+ G++CL+IL+E W P L I+ V+ + L
Sbjct: 78 FVFTFQVSPVYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIYGLFHL 137
Query: 117 LTDPNPDDPLVPEIAHMYKTDRAKYEATAR 146
T+PN +DPL + A + + + +E R
Sbjct: 138 FTEPNSEDPLNHDAAAVLRDNPKLFETNVR 167
>AT5G59300.1 | Symbols: UBC7, ATUBC7 | UBC7 (UBIQUITIN CARRIER
PROTEIN 7); protein binding / ubiquitin-protein ligase |
chr5:23919868-23921291 REVERSE
Length = 198
Score = 94.4 bits (233), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 69/120 (57%), Gaps = 13/120 (10%)
Query: 36 DMFHWQATIMGPPDSPYTGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDI 95
++F W TI+GPPD+ Y GG F + FP +YP PP V F + ++HPN+ S+G +C+ I
Sbjct: 65 NIFEWSVTIIGPPDTLYEGGFFNAIMTFPQNYPNSPPTVRFTSDMWHPNVYSDGRVCISI 124
Query: 96 L-------------KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYE 142
L E+W+P T+ ++LSI S+L+ PN + P E A ++ R +++
Sbjct: 125 LHPPGDDPSGYELASERWTPVHTVESIMLSIISMLSGPNDESPANVEAAKEWRDKRDEFK 184
>AT2G18600.1 | Symbols: | RUB1-conjugating enzyme, putative |
chr2:8073337-8074565 REVERSE
Length = 185
Score = 91.3 bits (225), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/152 (34%), Positives = 80/152 (52%), Gaps = 9/152 (5%)
Query: 2 DPRGFSMASKRILKELKDLQKDP-----PTSCSAG--PVAEDMFHWQATIMGPPDSPYTG 54
+ RG S K+ EL+ L KD P SC D+ +++ TI P + Y
Sbjct: 19 NGRGASTVKKQSAGELR-LHKDISELNLPKSCKISFPNGKNDLMNFEVTIK-PDEGYYLS 76
Query: 55 GVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSIC 114
G F+ + YP + PKV +TKV+HPNI+ G++CL+IL+E W P L I+ V+ +
Sbjct: 77 GNFVFSFQVSNMYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIYGLF 136
Query: 115 SLLTDPNPDDPLVPEIAHMYKTDRAKYEATAR 146
L T+PN +DPL E A + + + +E R
Sbjct: 137 HLFTEPNYEDPLNHEAAAVLRDNPKTFEYNVR 168
>AT3G17000.1 | Symbols: UBC32 | UBC32 (ubiquitin-conjugating enzyme
32); ubiquitin-protein ligase | chr3:5797296-5799467
FORWARD
Length = 309
Score = 83.6 bits (205), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 66/119 (55%), Gaps = 10/119 (8%)
Query: 9 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYTGGVFLVTIHFPPDYP 68
A KRIL+E+K++Q +P + P+ E++F WQ I GP D+ + GG++ I P DYP
Sbjct: 12 AVKRILQEVKEMQANPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPADYP 71
Query: 69 FKPPKVAFRTKVFHPN--INSNGSICLDILK---EQWSPALTISKVLLSICSLL-TDPN 121
FKPP T PN +N ICL I E W P+ ++ L+++ + + T PN
Sbjct: 72 FKPPSFMLLT----PNGRFETNTKICLSISNYHPEHWQPSWSVRTALVALIAFMPTSPN 126
>AT1G75440.1 | Symbols: UBC16 | UBC16 (ubiquitin-conjugating enzyme
16); small conjugating protein ligase/ ubiquitin-protein
ligase | chr1:28313623-28314960 FORWARD
Length = 161
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 60/103 (58%), Gaps = 2/103 (1%)
Query: 8 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYTGGVFLVTIHFPPDY 67
+A+ R+ KEL + Q +PPT V +++ W ++G P + Y + + + FP Y
Sbjct: 15 IATNRLQKELVEWQMNPPTGFKHK-VTDNLQRWIIEVIGAPGTLYANDTYQLQVDFPEHY 73
Query: 68 PFKPPKVAFRTKV-FHPNINSNGSICLDILKEQWSPALTISKV 109
P + P+V F HP+I SNG ICLDIL + WSPA+T+S +
Sbjct: 74 PMESPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSI 116
>AT1G45050.1 | Symbols: ATUBC2-1, UBC15 | ATUBC2-1;
ubiquitin-protein ligase | chr1:17031337-17032967
FORWARD
Length = 161
Score = 77.4 bits (189), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 59/103 (57%), Gaps = 2/103 (1%)
Query: 8 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYTGGVFLVTIHFPPDY 67
+A R+ KEL + Q +PPT V +++ W + G P + Y + + + FP Y
Sbjct: 15 IACNRLQKELSEWQLNPPTGFRHK-VTDNLQKWTIDVTGAPGTLYANETYQLQVEFPEHY 73
Query: 68 PFKPPKVAFRTKV-FHPNINSNGSICLDILKEQWSPALTISKV 109
P + P+V F + HP+I SNG ICLDIL + WSPA+T++ V
Sbjct: 74 PMEAPQVVFVSPAPSHPHIYSNGHICLDILYDSWSPAMTVNSV 116
>AT5G42990.1 | Symbols: UBC18 | UBC18 (ubiquitin-conjugating enzyme
18); small conjugating protein ligase/ ubiquitin-protein
ligase | chr5:17244206-17245904 REVERSE
Length = 161
Score = 77.0 bits (188), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 58/103 (56%), Gaps = 2/103 (1%)
Query: 8 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYTGGVFLVTIHFPPDY 67
+A R+ KEL + Q +PPT V +++ W + G P + Y + + + FP Y
Sbjct: 15 IACNRLQKELSEWQVNPPTGFKHR-VTDNLQKWVIEVTGAPGTLYANETYNLQVEFPQHY 73
Query: 68 PFKPPKVAFRTKV-FHPNINSNGSICLDILKEQWSPALTISKV 109
P + P+V F HP+I SNG ICLDIL + WSPA+T+S V
Sbjct: 74 PMEAPQVIFVPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSV 116
>AT4G36410.1 | Symbols: UBC17 | UBC17 (UBIQUITIN-CONJUGATING ENZYME
17); small conjugating protein ligase/ ubiquitin-protein
ligase | chr4:17201969-17202890 FORWARD
Length = 161
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 59/103 (57%), Gaps = 2/103 (1%)
Query: 8 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYTGGVFLVTIHFPPDY 67
+A+ R+ KE + Q +PP+ V++++ W + G P + Y + + + FP Y
Sbjct: 15 IATNRLQKEFMEWQTNPPSGFKHR-VSDNLQRWIIEVHGVPGTLYANETYQLQVEFPEHY 73
Query: 68 PFKPPKVAFRTKV-FHPNINSNGSICLDILKEQWSPALTISKV 109
P + P+V F+ HP+I SNG ICLD+L + WSPA+ +S +
Sbjct: 74 PMEAPQVIFQHPAPLHPHIYSNGHICLDVLYDSWSPAMRLSSI 116
>AT5G50430.2 | Symbols: UBC33 | UBC33 (ubiquitin-conjugating enzyme
33); ubiquitin-protein ligase | chr5:20534366-20536307
REVERSE
Length = 243
Score = 73.2 bits (178), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 59/117 (50%), Gaps = 9/117 (7%)
Query: 11 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYTGGVFLVTIHFPPDYPFK 70
KR+ KE + L K+P + A P D+ W + G +P+ GG + I FPP+YP+K
Sbjct: 8 KRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSEGTPFAGGFYYGKIKFPPEYPYK 67
Query: 71 PPKVAFRTKVFHPN--INSNGSICL---DILKEQWSPALTISKVLLSICSLLTDPNP 122
PP + T PN + ICL D E W+P ++S +L + S + D +P
Sbjct: 68 PPGITMTT----PNGRFVTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDNSP 120
>AT5G50430.1 | Symbols: UBC33 | UBC33 (ubiquitin-conjugating enzyme
33); ubiquitin-protein ligase | chr5:20534366-20536307
REVERSE
Length = 243
Score = 73.2 bits (178), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 59/117 (50%), Gaps = 9/117 (7%)
Query: 11 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYTGGVFLVTIHFPPDYPFK 70
KR+ KE + L K+P + A P D+ W + G +P+ GG + I FPP+YP+K
Sbjct: 8 KRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSEGTPFAGGFYYGKIKFPPEYPYK 67
Query: 71 PPKVAFRTKVFHPN--INSNGSICL---DILKEQWSPALTISKVLLSICSLLTDPNP 122
PP + T PN + ICL D E W+P ++S +L + S + D +P
Sbjct: 68 PPGITMTT----PNGRFVTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDNSP 120
>AT1G17280.2 | Symbols: UBC34 | UBC34 (ubiquitin-conjugating enzyme
34); ubiquitin-protein ligase | chr1:5917146-5919162
REVERSE
Length = 237
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 59/117 (50%), Gaps = 9/117 (7%)
Query: 11 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYTGGVFLVTIHFPPDYPFK 70
KR+ KE + L K+P + A P D+ W + G +P+ GG + I FPP+YP+K
Sbjct: 8 KRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSEGTPFAGGFYYGKIKFPPEYPYK 67
Query: 71 PPKVAFRTKVFHPN--INSNGSICL---DILKEQWSPALTISKVLLSICSLLTDPNP 122
PP + T PN + ICL D E W+P ++S +L + S + D +P
Sbjct: 68 PPGITMTT----PNGRFMTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDTSP 120
>AT1G17280.1 | Symbols: UBC34 | UBC34 (ubiquitin-conjugating enzyme
34); ubiquitin-protein ligase | chr1:5917146-5919162
REVERSE
Length = 237
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 59/117 (50%), Gaps = 9/117 (7%)
Query: 11 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYTGGVFLVTIHFPPDYPFK 70
KR+ KE + L K+P + A P D+ W + G +P+ GG + I FPP+YP+K
Sbjct: 8 KRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSEGTPFAGGFYYGKIKFPPEYPYK 67
Query: 71 PPKVAFRTKVFHPN--INSNGSICL---DILKEQWSPALTISKVLLSICSLLTDPNP 122
PP + T PN + ICL D E W+P ++S +L + S + D +P
Sbjct: 68 PPGITMTT----PNGRFMTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDTSP 120
>AT3G15355.1 | Symbols: UBC25, PFU1 | UBC25 (UBIQUITIN-CONJUGATING
ENZYME 25); small conjugating protein ligase |
chr3:5183858-5186669 FORWARD
Length = 609
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 73/152 (48%), Gaps = 13/152 (8%)
Query: 10 SKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYTGGVFLVTIHFPPDYPF 69
+KRI E + L+KD P M +A I+G +PY G+F I FP YP
Sbjct: 334 AKRIQDEWRILEKDLPEMIFVRAYESRMDLLRAVIIGAQGTPYHDGLFFFDIFFPDTYPS 393
Query: 70 KPPKVAFRTKVF--HPNINSNGSICLDIL-------KEQWSPAL-TISKVLLSICSLLTD 119
PP V + + +PN+ + G +CL +L +E+W P T+ +VL+SI L+ +
Sbjct: 394 TPPIVHYHSGGLRINPNLYNCGKVCLSLLGTWSGNQREKWIPNTSTMLQVLVSIQGLILN 453
Query: 120 PNPDDPLVPEIAHMYKTDRAKYEATARSWTQK 151
P E + A E+T++++++
Sbjct: 454 ---QKPYFNEPGYERSAGSAHGESTSKAYSEN 482
>AT1G53020.1 | Symbols: UBC26, PFU3 | UBC26 (UBIQUITIN-CONJUGATING
ENZYME 26); ubiquitin-protein ligase |
chr1:19751372-19759474 REVERSE
Length = 1163
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 74/150 (49%), Gaps = 13/150 (8%)
Query: 11 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYTGGVFLVTIHFPPDYPFK 70
K++ + K L+ D P + S M +A I+G +PY G+F I FP YP
Sbjct: 274 KKVQADWKILENDLPEAISVRACESRMDLLRAVIIGAEGTPYHDGLFFFDIQFPDTYPSV 333
Query: 71 PPKVAFRTK--VFHPNINSNGSICLDIL-------KEQWSP-ALTISKVLLSICSLLTDP 120
PP V + + +PN+ + G +CL +L +E+W P T+ ++L+SI +L+ +
Sbjct: 334 PPNVHYHSGGLRINPNLYNCGKVCLSLLGTWAGSAREKWLPNESTMLQLLVSIQALILN- 392
Query: 121 NPDDPLVPEIAHMYKTDRAKYEATARSWTQ 150
+ P E ++ A E+ ++ +++
Sbjct: 393 --EKPYFNEPGYVQSAGTASGESKSKVYSE 420
Score = 57.0 bits (136), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 61/122 (50%), Gaps = 10/122 (8%)
Query: 11 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYTGGVFLVTIHFPPDYPFK 70
K I KE K L K+ P + + +A I+G +PY G+F I FP YP
Sbjct: 608 KDIQKEWKILDKNLPETIFVRACESRIDLLRAVIIGAEGTPYHDGLFFFDIQFPDTYPSV 667
Query: 71 PPKVAFRTK--VFHPNINSNGSICLDIL-------KEQWSP-ALTISKVLLSICSLLTDP 120
PPKV + + +PN+ G +CL ++ +E+W P T+ ++L+SI +L+ +
Sbjct: 668 PPKVHYHSGGLRINPNLYKCGKVCLSLISTWTGKKREKWLPKESTMLQLLVSIQALILNE 727
Query: 121 NP 122
P
Sbjct: 728 KP 729
>AT2G33770.1 | Symbols: UBC24, ATUBC24, PHO2 | PHO2 (PHOSPHATE 2);
ubiquitin-protein ligase | chr2:14277785-14281482
REVERSE
Length = 907
Score = 57.8 bits (138), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 3/97 (3%)
Query: 11 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYTGGVFLVTIHFPPDYPFK 70
K++ +E +L+ + P + E M +A ++G P +PY G+F I PP YP +
Sbjct: 665 KKVQQEWSNLEANLPNTIYVRVCEERMDLLRAALVGAPGTPYHDGLFFFDIMLPPQYPHE 724
Query: 71 PPKVAFRTK--VFHPNINSNGSICLDILKEQWSPALT 105
PP V + + +PN+ +G +CL +L WS + T
Sbjct: 725 PPMVHYHSGGMRLNPNLYESGRVCLSLLN-TWSGSGT 760
>AT2G16920.1 | Symbols: UBC23, PFU2 | UBC23 (UBIQUITIN-CONJUGATING
ENZYME 23); small conjugating protein ligase/
ubiquitin-protein ligase | chr2:7334559-7338827 REVERSE
Length = 1102
Score = 57.0 bits (136), Expect = 7e-09, Method: Composition-based stats.
Identities = 35/122 (28%), Positives = 58/122 (47%), Gaps = 10/122 (8%)
Query: 11 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYTGGVFLVTIHFPPDYPFK 70
K++ ++ K LQ + P + M +A I+G +PY G+F H P DYP
Sbjct: 853 KKVDQDWKILQNNLPDGIFVRAYEDRMDLLRAVIVGAFGTPYQDGLFFFDFHLPSDYPSV 912
Query: 71 PPKVAFRTK--VFHPNINSNGSICLDIL-------KEQWSP-ALTISKVLLSICSLLTDP 120
PP + + +PN+ G +CL +L E W P + +I +VL+S+ L+ +
Sbjct: 913 PPSAYYHSGGWRLNPNLYEEGKVCLSLLNTWTGRGNEVWDPKSSSILQVLVSLQGLVLNS 972
Query: 121 NP 122
P
Sbjct: 973 KP 974
>AT5G50430.3 | Symbols: UBC33 | UBC33 (ubiquitin-conjugating enzyme
33); ubiquitin-protein ligase | chr5:20534366-20536307
REVERSE
Length = 230
Score = 56.6 bits (135), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 54/117 (46%), Gaps = 22/117 (18%)
Query: 11 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYTGGVFLVTIHFPPDYPFK 70
KR+ KE + L K+P + A P D+ W+ G + I FPP+YP+K
Sbjct: 8 KRLQKEYRALCKEPVSHVVARPSPNDILEWR-------------GFYYGKIKFPPEYPYK 54
Query: 71 PPKVAFRTKVFHPN--INSNGSICL---DILKEQWSPALTISKVLLSICSLLTDPNP 122
PP + T PN + ICL D E W+P ++S +L + S + D +P
Sbjct: 55 PPGITMTT----PNGRFVTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDNSP 107