Jatropha Genome Database
- JcCA0310371.20
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0310371.20 + phase: 0 /partial
(520 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G11380.1 | Symbols: DXPS3 | DXPS3 (1-deoxy-D-xylulose 5-phosp... 709 0.0
AT5G11380.2 | Symbols: DXPS3 | DXPS3 (1-deoxy-D-xylulose 5-phosp... 708 0.0
AT4G15560.1 | Symbols: CLA1, DEF, CLA, DXS, DXPS2 | CLA1 (CLOROP... 588 e-168
AT3G21500.1 | Symbols: DXPS1 | 1-deoxy-D-xylulose-5-phosphate sy... 518 e-147
AT3G21500.2 | Symbols: DXPS1 | 1-deoxy-D-xylulose-5-phosphate sy... 514 e-146
>AT5G11380.1 | Symbols: DXPS3 | DXPS3 (1-deoxy-D-xylulose
5-phosphate synthase 3); 1-deoxy-D-xylulose-5-phosphate
synthase | chr5:3630172-3633250 FORWARD
Length = 700
Score = 709 bits (1831), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/518 (67%), Positives = 403/518 (77%), Gaps = 19/518 (3%)
Query: 4 SRICSVPDLDDIFWEKVPTPILDVVENPIHXXXXXXXXXXXXADEIRAELTSIM-SSTQK 62
+R+CS+P+ D EK TPILD +E P+ ADEIR EL S++ TQK
Sbjct: 57 ARVCSLPNTDGYCDEKFETPILDSIETPLQLKNLSVKELKLLADEIRTELHSVLWKKTQK 116
Query: 63 SLKASLAVVELTVAIHYIFHAPVDKILWDVGEQTYAHKILTGRRSLMHTLRQKNGLSGFT 122
S+ S A +ELT+A+HY+F APVD ILWD EQTYAHK+LT R S + + RQ +G+SG T
Sbjct: 117 SMNPSFAAIELTLALHYVFRAPVDNILWDAVEQTYAHKVLTRRWSAIPS-RQNSGISGVT 175
Query: 123 SRSESEYDPFGAGHGCNSISAGLGMAVARDIKGKRERVVTVISNGTTMAGQVYEAMSNAG 182
SR ESEYD FG GHGCNSISAGLG+AVARD+KGKR+RVV VI N T AGQ YEAMSNAG
Sbjct: 176 SRLESEYDSFGTGHGCNSISAGLGLAVARDMKGKRDRVVAVIDNVTITAGQAYEAMSNAG 235
Query: 183 YLDSNMIVILNDSRHSLHPKIEEGPKTSITAXXXXXXXXXXXXXFRRFREVAKGVTKRIG 242
YLDSNMIVILNDSRHSLHP +EEG K SI+A FR+FRE+AK +TKRIG
Sbjct: 236 YLDSNMIVILNDSRHSLHPNMEEGSKASISALSSIMSKIQSSKVFRKFRELAKAMTKRIG 295
Query: 243 MGMHELAAKVDEYARGMIGPPGSTLFEELGLYYIGPVDGHSIEDLVCVLQEVASLDSMGP 302
GM+E AAKVDEYARGM+GP GSTLFEELGLYYIGPVDGH+IEDLVCVL+EV+SLDSMGP
Sbjct: 296 KGMYEWAAKVDEYARGMVGPTGSTLFEELGLYYIGPVDGHNIEDLVCVLREVSSLDSMGP 355
Query: 303 VLVHVITEENRGLEDKERSESLENLQEGSCKSDSSLYSIHTRTYSDCFVEALFMEAEKDK 362
VLVHVITE NR +E+++N+ RTYSDCFVEAL MEAEKD+
Sbjct: 356 VLVHVITEGNRD------AETVKNIMVKD-----------RRTYSDCFVEALVMEAEKDR 398
Query: 363 DIVIVHAGMEMETAFQRIQERFPDRFFDVGMAEQHAVTFSAGLSCGGLKPFCIIPSAFLQ 422
DIV+VHAGMEM+ + QERFPDRFF+VGMAEQHAVTFSAGLS GGLKPFCIIPSAFLQ
Sbjct: 399 DIVVVHAGMEMDPSLLTFQERFPDRFFNVGMAEQHAVTFSAGLSSGGLKPFCIIPSAFLQ 458
Query: 423 RAYDQVIHDVDQQKIPVRFVIPSAGLVGSDGPMQCGAFDITFMSCLPNMIVMAPSDEDEL 482
RAYDQV+HDVD+Q+ VRFVI SAGLVGSDGP+QCGAFDI FMS LPNMI MAP+DEDEL
Sbjct: 459 RAYDQVVHDVDRQRKAVRFVITSAGLVGSDGPVQCGAFDIAFMSSLPNMIAMAPADEDEL 518
Query: 483 VDMVATAACIDDRPVCFRYPRGAIIGTDHYTRSGIPIE 520
V+MVATAA + DRPVCFR+PRG+I+ ++ +G+PIE
Sbjct: 519 VNMVATAAYVTDRPVCFRFPRGSIVNMNYLVPTGLPIE 556
>AT5G11380.2 | Symbols: DXPS3 | DXPS3 (1-deoxy-D-xylulose
5-phosphate synthase 3); 1-deoxy-D-xylulose-5-phosphate
synthase | chr5:3630172-3632762 FORWARD
Length = 565
Score = 708 bits (1828), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/517 (67%), Positives = 402/517 (77%), Gaps = 19/517 (3%)
Query: 4 SRICSVPDLDDIFWEKVPTPILDVVENPIHXXXXXXXXXXXXADEIRAELTSIM-SSTQK 62
+R+CS+P+ D EK TPILD +E P+ ADEIR EL S++ TQK
Sbjct: 57 ARVCSLPNTDGYCDEKFETPILDSIETPLQLKNLSVKELKLLADEIRTELHSVLWKKTQK 116
Query: 63 SLKASLAVVELTVAIHYIFHAPVDKILWDVGEQTYAHKILTGRRSLMHTLRQKNGLSGFT 122
S+ S A +ELT+A+HY+F APVD ILWD EQTYAHK+LT R S + + RQ +G+SG T
Sbjct: 117 SMNPSFAAIELTLALHYVFRAPVDNILWDAVEQTYAHKVLTRRWSAIPS-RQNSGISGVT 175
Query: 123 SRSESEYDPFGAGHGCNSISAGLGMAVARDIKGKRERVVTVISNGTTMAGQVYEAMSNAG 182
SR ESEYD FG GHGCNSISAGLG+AVARD+KGKR+RVV VI N T AGQ YEAMSNAG
Sbjct: 176 SRLESEYDSFGTGHGCNSISAGLGLAVARDMKGKRDRVVAVIDNVTITAGQAYEAMSNAG 235
Query: 183 YLDSNMIVILNDSRHSLHPKIEEGPKTSITAXXXXXXXXXXXXXFRRFREVAKGVTKRIG 242
YLDSNMIVILNDSRHSLHP +EEG K SI+A FR+FRE+AK +TKRIG
Sbjct: 236 YLDSNMIVILNDSRHSLHPNMEEGSKASISALSSIMSKIQSSKVFRKFRELAKAMTKRIG 295
Query: 243 MGMHELAAKVDEYARGMIGPPGSTLFEELGLYYIGPVDGHSIEDLVCVLQEVASLDSMGP 302
GM+E AAKVDEYARGM+GP GSTLFEELGLYYIGPVDGH+IEDLVCVL+EV+SLDSMGP
Sbjct: 296 KGMYEWAAKVDEYARGMVGPTGSTLFEELGLYYIGPVDGHNIEDLVCVLREVSSLDSMGP 355
Query: 303 VLVHVITEENRGLEDKERSESLENLQEGSCKSDSSLYSIHTRTYSDCFVEALFMEAEKDK 362
VLVHVITE NR +E+++N+ RTYSDCFVEAL MEAEKD+
Sbjct: 356 VLVHVITEGNRD------AETVKNIMVKD-----------RRTYSDCFVEALVMEAEKDR 398
Query: 363 DIVIVHAGMEMETAFQRIQERFPDRFFDVGMAEQHAVTFSAGLSCGGLKPFCIIPSAFLQ 422
DIV+VHAGMEM+ + QERFPDRFF+VGMAEQHAVTFSAGLS GGLKPFCIIPSAFLQ
Sbjct: 399 DIVVVHAGMEMDPSLLTFQERFPDRFFNVGMAEQHAVTFSAGLSSGGLKPFCIIPSAFLQ 458
Query: 423 RAYDQVIHDVDQQKIPVRFVIPSAGLVGSDGPMQCGAFDITFMSCLPNMIVMAPSDEDEL 482
RAYDQV+HDVD+Q+ VRFVI SAGLVGSDGP+QCGAFDI FMS LPNMI MAP+DEDEL
Sbjct: 459 RAYDQVVHDVDRQRKAVRFVITSAGLVGSDGPVQCGAFDIAFMSSLPNMIAMAPADEDEL 518
Query: 483 VDMVATAACIDDRPVCFRYPRGAIIGTDHYTRSGIPI 519
V+MVATAA + DRPVCFR+PRG+I+ ++ +G+PI
Sbjct: 519 VNMVATAAYVTDRPVCFRFPRGSIVNMNYLVPTGLPI 555
>AT4G15560.1 | Symbols: CLA1, DEF, CLA, DXS, DXPS2 | CLA1
(CLOROPLASTOS ALTERADOS 1);
1-deoxy-D-xylulose-5-phosphate synthase |
chr4:8884218-8887254 FORWARD
Length = 717
Score = 588 bits (1515), Expect = e-168, Method: Compositional matrix adjust.
Identities = 297/525 (56%), Positives = 364/525 (69%), Gaps = 11/525 (2%)
Query: 4 SRIC-SVPDLDDIFWEKVPTPILDVVENPIHXXXXXXXXXXXXADEIRAELTSIMSSTQK 62
+++C S+ + + + + PTP+LD + PIH +DE+R+++ +S T
Sbjct: 55 AKVCASLAEKGEYYSNRPPTPLLDTINYPIHMKNLSVKELKQLSDELRSDVIFNVSKTGG 114
Query: 63 SLKASLAVVELTVAIHYIFHAPVDKILWDVGEQTYAHKILTGRRSLMHTLRQKNGLSGFT 122
L +SL VVELTVA+HYIF+ P DKILWDVG Q+Y HKILTGRR M T+RQ NGLSGFT
Sbjct: 115 HLGSSLGVVELTVALHYIFNTPQDKILWDVGHQSYPHKILTGRRGKMPTMRQTNGLSGFT 174
Query: 123 SRSESEYDPFGAGHGCNSISAGLGMAVARDIKGKRERVVTVISNGTTMAGQVYEAMSNAG 182
R ESE+D FG GH +ISAGLGMAV RD+KGK VV VI +G AGQ YEAM+NAG
Sbjct: 175 KRGESEHDCFGTGHSSTTISAGLGMAVGRDLKGKNNNVVAVIGDGAMTAGQAYEAMNNAG 234
Query: 183 YLDSNMIVILNDSRH-SLHPKIEEGPKTSITAXXXXXXXXXXXXXFRRFREVAKGVTKRI 241
YLDS+MIVILND++ SL +GP + A R REVAKG+TK+I
Sbjct: 235 YLDSDMIVILNDNKQVSLPTATLDGPSPPVGALSSALSRLQSNPALRELREVAKGMTKQI 294
Query: 242 GMGMHELAAKVDEYARGMIGPPGSTLFEELGLYYIGPVDGHSIEDLVCVLQEVASLDSMG 301
G MH+LAAKVDEYARGMI GS+LFEELGLYYIGPVDGH+I+DLV +L+EV S + G
Sbjct: 295 GGPMHQLAAKVDEYARGMISGTGSSLFEELGLYYIGPVDGHNIDDLVAILKEVKSTRTTG 354
Query: 302 PVLVHVITEENRGLEDKERSESLENLQEGSCKSDSSL-----YSIHTRTYSDCFVEALFM 356
PVL+HV+TE+ RG ER++ + G K D + + T++Y+ F EAL
Sbjct: 355 PVLIHVVTEKGRGYPYAERAD---DKYHGVVKFDPATGRQFKTTNKTQSYTTYFAEALVA 411
Query: 357 EAEKDKDIVIVHAGMEMETAFQRIQERFPDRFFDVGMAEQHAVTFSAGLSCGGLKPFCII 416
EAE DKD+V +HA M T Q RFP R FDVG+AEQHAVTF+AGL+C GLKPFC I
Sbjct: 412 EAEVDKDVVAIHAAMGGGTGLNLFQRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAI 471
Query: 417 PSAFLQRAYDQVIHDVDQQKIPVRFVIPSAGLVGSDGPMQCGAFDITFMSCLPNMIVMAP 476
S+F+QRAYDQV+HDVD QK+PVRF + AGLVG+DGP CGAFD+TFM+CLPNMIVMAP
Sbjct: 472 YSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMACLPNMIVMAP 531
Query: 477 SDEDELVDMVATAACIDDRPVCFRYPRGAIIGTD-HYTRSGIPIE 520
SDE +L +MVATA IDDRP CFRYPRG IG G+PIE
Sbjct: 532 SDEADLFNMVATAVAIDDRPSCFRYPRGNGIGVALPPGNKGVPIE 576
>AT3G21500.1 | Symbols: DXPS1 | 1-deoxy-D-xylulose-5-phosphate
synthase | chr3:7573907-7576594 REVERSE
Length = 640
Score = 518 bits (1334), Expect = e-147, Method: Compositional matrix adjust.
Identities = 260/506 (51%), Positives = 333/506 (65%), Gaps = 34/506 (6%)
Query: 5 RICSVPDLDDIFWEKVPTPILDVVENPIHXXXXXXXXXXXXADEIRAELTSIMSSTQKSL 64
R + + + + + PTP+LD + +P+H +DE+R+++ +S T L
Sbjct: 47 RATTFSEKGEYYSNRPPTPLLDTINHPMHMKNLSIKELKVLSDELRSDVIFNVSKTGGHL 106
Query: 65 KASLAVVELTVAIHYIFHAPVDKILWDVGEQTYAHKILTGRRSLMHTLRQKNGLSGFTSR 124
++L VVELTVA+HYIF+ P DKILWDVG Q+Y HKILTGRR M T+RQ NGLSG+T R
Sbjct: 107 GSNLGVVELTVALHYIFNTPHDKILWDVGHQSYPHKILTGRRGKMKTIRQTNGLSGYTKR 166
Query: 125 SESEYDPFGAGHGCNSISAGLGMAVARDIKGKRERVVTVISNGTTMAGQVYEAMSNAGYL 184
ESE+D FG GH ++SAGLGMAV RD+KG VV+VI +G AGQ YEAM+NAGYL
Sbjct: 167 RESEHDSFGTGHSSTTLSAGLGMAVGRDLKGMNNSVVSVIGDGAMTAGQAYEAMNNAGYL 226
Query: 185 DSNMIVILNDSRHSLHPKIE-EGPKTSITAXXXXXXXXXXXXXFRRFREVAKGVTKRIGM 243
SNMIVILND++ P +GP + A +
Sbjct: 227 HSNMIVILNDNKQVSLPTANLDGPTQPVGA---------------------------LSC 259
Query: 244 GMHELAAKVDEYARGMIGPPGSTLFEELGLYYIGPVDGHSIEDLVCVLQEVASLDSMGPV 303
+ L + GMI STLFEELG +Y+GPVDGH+I+DLV +L+ + S ++GPV
Sbjct: 260 ALSRLQSNC-----GMIRETSSTLFEELGFHYVGPVDGHNIDDLVSILETLKSTKTIGPV 314
Query: 304 LVHVITEENRGLEDKERSESLENLQEGSCKSDSSLYSI-HTRTYSDCFVEALFMEAEKDK 362
L+HV+TE+ RG ER++ ++ + ++ +I T++Y+ CFVEAL EAE DK
Sbjct: 315 LIHVVTEKGRGYPYAERADDKYHVLKFDPETGKQFKNISKTQSYTSCFVEALIAEAEADK 374
Query: 363 DIVIVHAGMEMETAFQRIQERFPDRFFDVGMAEQHAVTFSAGLSCGGLKPFCIIPSAFLQ 422
DIV +HA M T + RFP R FDVG+AEQHAVTF+AGL+C GLKPFC I S+F+Q
Sbjct: 375 DIVAIHAAMGGGTMLNLFESRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCTIYSSFMQ 434
Query: 423 RAYDQVIHDVDQQKIPVRFVIPSAGLVGSDGPMQCGAFDITFMSCLPNMIVMAPSDEDEL 482
RAYDQV+HDVD QK+PVRF I AGL+G+DGP CGAFD+TFM+CLPNMIVMAPSDE EL
Sbjct: 435 RAYDQVVHDVDLQKLPVRFAIDRAGLMGADGPTHCGAFDVTFMACLPNMIVMAPSDEAEL 494
Query: 483 VDMVATAACIDDRPVCFRYPRGAIIG 508
+MVATAA IDDRP CFRY RG IG
Sbjct: 495 FNMVATAAAIDDRPSCFRYHRGNGIG 520
>AT3G21500.2 | Symbols: DXPS1 | 1-deoxy-D-xylulose-5-phosphate
synthase | chr3:7573907-7576594 REVERSE
Length = 641
Score = 514 bits (1324), Expect = e-146, Method: Compositional matrix adjust.
Identities = 260/507 (51%), Positives = 332/507 (65%), Gaps = 35/507 (6%)
Query: 5 RICSVPDLDDIFWEKVPTPILDVVENPIHXXXXXXXXXXXXADEIRAELTSIMSSTQKSL 64
R + + + + + PTP+LD + +P+H +DE+R+++ +S T L
Sbjct: 47 RATTFSEKGEYYSNRPPTPLLDTINHPMHMKNLSIKELKVLSDELRSDVIFNVSKTGGHL 106
Query: 65 KASLAVVELTVAIHYIFHAPVDKILWDVGEQTYAHKILTGRRSLMHTLRQKNGLSGFTSR 124
++L VVELTVA+HYIF+ P DKILWDVG Q+Y HKILTGRR M T+RQ NGLSG+T R
Sbjct: 107 GSNLGVVELTVALHYIFNTPHDKILWDVGHQSYPHKILTGRRGKMKTIRQTNGLSGYTKR 166
Query: 125 SESEYDPFGAGHGCNSISAGLGMAVARDIKGKRERVVTVISNGTTMAGQVYEAMSNAGYL 184
ESE+D FG GH ++SAGLGMAV RD+KG VV+VI +G AGQ YEAM+NAGYL
Sbjct: 167 RESEHDSFGTGHSSTTLSAGLGMAVGRDLKGMNNSVVSVIGDGAMTAGQAYEAMNNAGYL 226
Query: 185 DSNMIVILNDSRHSLHPKIE-EGPKTSITAXXXXXXXXXXXXXFRRFREVAKGVTKRIGM 243
SNMIVILND++ P +GP + A +
Sbjct: 227 HSNMIVILNDNKQVSLPTANLDGPTQPVGA---------------------------LSC 259
Query: 244 GMHELAAKVDEYARGMIGPPGSTLFEELGLYYIGPVDGHSIEDLVCVLQEVASLDSMGPV 303
+ L + GMI STLFEELG +Y+GPVDGH+I+DLV +L+ + S ++GPV
Sbjct: 260 ALSRLQSNC-----GMIRETSSTLFEELGFHYVGPVDGHNIDDLVSILETLKSTKTIGPV 314
Query: 304 LVHVITEENRGLEDKERSE-SLENLQEGSCKSDSSLYSI-HTRTYSDCFVEALFMEAEKD 361
L+HV+TE+ RG ER++ + + ++ +I T++Y+ CFVEAL EAE D
Sbjct: 315 LIHVVTEKGRGYPYAERADDKYHGVLKFDPETGKQFKNISKTQSYTSCFVEALIAEAEAD 374
Query: 362 KDIVIVHAGMEMETAFQRIQERFPDRFFDVGMAEQHAVTFSAGLSCGGLKPFCIIPSAFL 421
KDIV +HA M T + RFP R FDVG+AEQHAVTF+AGL+C GLKPFC I S+F+
Sbjct: 375 KDIVAIHAAMGGGTMLNLFESRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCTIYSSFM 434
Query: 422 QRAYDQVIHDVDQQKIPVRFVIPSAGLVGSDGPMQCGAFDITFMSCLPNMIVMAPSDEDE 481
QRAYDQV+HDVD QK+PVRF I AGL+G+DGP CGAFD+TFM+CLPNMIVMAPSDE E
Sbjct: 435 QRAYDQVVHDVDLQKLPVRFAIDRAGLMGADGPTHCGAFDVTFMACLPNMIVMAPSDEAE 494
Query: 482 LVDMVATAACIDDRPVCFRYPRGAIIG 508
L +MVATAA IDDRP CFRY RG IG
Sbjct: 495 LFNMVATAAAIDDRPSCFRYHRGNGIG 521