Jatropha Genome Database

JcCA0309221.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0309221.10 + phase: 0 /pseudo
         (181 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G16710.2 | Symbols:  | glycosyltransferase family protein 28 ...   211   3e-55
AT4G16710.1 | Symbols:  | glycosyltransferase family protein 28 ...   211   3e-55

>AT4G16710.2 | Symbols:  | glycosyltransferase family protein 28 |
           chr4:9398818-9399618 FORWARD
          Length = 176

 Score =  211 bits (536), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 108/176 (61%), Positives = 129/176 (73%), Gaps = 9/176 (5%)

Query: 9   DQKKRIVFVTVGTNTIRCSCESGGYKGS*TKNCLEE----GILISLFKMGRGSYTPTKSE 64
           +  KR+VFVTVGT +          K   ++N  +E    G    L +MGRG + PTK +
Sbjct: 6   ENAKRVVFVTVGTTSFDALV-----KAVVSQNVKDELQKRGFTHLLIQMGRGIFFPTKCD 60

Query: 65  GEDGSVAVDYFTFSSSIADHLRSASLVISHAGSGSIFETLRLHKPLIVVVNEDLMDNHQT 124
           G DGS+ VDYFTFSSSIAD++RSASLVISHAGSGSIFETL+L KPLIVVVNEDLMDNHQ 
Sbjct: 61  GADGSLVVDYFTFSSSIADYIRSASLVISHAGSGSIFETLKLGKPLIVVVNEDLMDNHQC 120

Query: 125 ELAEELAERKHLYCARPQTIHHTIADMDLESLLPYPAGDATPVAKLINRFLGFPDD 180
           ELAE L ERKHLY  RP ++H T+  M+L SL+ Y  GD TPVA++I+RFLGFPDD
Sbjct: 121 ELAEALEERKHLYYTRPHSLHQTLTKMELGSLVQYTPGDGTPVARIIDRFLGFPDD 176


>AT4G16710.1 | Symbols:  | glycosyltransferase family protein 28 |
           chr4:9398818-9399618 FORWARD
          Length = 176

 Score =  211 bits (536), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 108/176 (61%), Positives = 129/176 (73%), Gaps = 9/176 (5%)

Query: 9   DQKKRIVFVTVGTNTIRCSCESGGYKGS*TKNCLEE----GILISLFKMGRGSYTPTKSE 64
           +  KR+VFVTVGT +          K   ++N  +E    G    L +MGRG + PTK +
Sbjct: 6   ENAKRVVFVTVGTTSFDALV-----KAVVSQNVKDELQKRGFTHLLIQMGRGIFFPTKCD 60

Query: 65  GEDGSVAVDYFTFSSSIADHLRSASLVISHAGSGSIFETLRLHKPLIVVVNEDLMDNHQT 124
           G DGS+ VDYFTFSSSIAD++RSASLVISHAGSGSIFETL+L KPLIVVVNEDLMDNHQ 
Sbjct: 61  GADGSLVVDYFTFSSSIADYIRSASLVISHAGSGSIFETLKLGKPLIVVVNEDLMDNHQC 120

Query: 125 ELAEELAERKHLYCARPQTIHHTIADMDLESLLPYPAGDATPVAKLINRFLGFPDD 180
           ELAE L ERKHLY  RP ++H T+  M+L SL+ Y  GD TPVA++I+RFLGFPDD
Sbjct: 121 ELAEALEERKHLYYTRPHSLHQTLTKMELGSLVQYTPGDGTPVARIIDRFLGFPDD 176