Jatropha Genome Database

JcCA0309051.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0309051.10 + phase: 0 
         (225 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G26830.1 | Symbols: emb1187 | emb1187 (embryo defective 1187)...   299   8e-82
AT1G74320.1 | Symbols:  | choline kinase, putative | chr1:279411...    97   1e-20
AT1G71697.1 | Symbols: ATCK1, CK | ATCK1 (CHOLINE KINASE 1); cho...    87   8e-18
AT4G09760.3 | Symbols:  | choline kinase, putative | chr4:614959...    86   2e-17
AT4G09760.1 | Symbols:  | choline kinase, putative | chr4:614895...    86   3e-17
AT4G09760.2 | Symbols:  | choline kinase, putative | chr4:614895...    86   3e-17

>AT2G26830.1 | Symbols: emb1187 | emb1187 (embryo defective 1187);
           kinase/ phosphotransferase, alcohol group as acceptor |
           chr2:11443599-11446958 FORWARD
          Length = 374

 Score =  299 bits (766), Expect = 8e-82,   Method: Compositional matrix adjust.
 Identities = 140/195 (71%), Positives = 171/195 (87%)

Query: 26  ILSSNLTVDCSLSLPQMAPRVVELCKDLFKKWSKLDDSLFSVERVSGGITNLLLKVTVKE 85
           I  S+  VD SL LP M PR++ELCKDLFK W +LDDSLFSVERVSGGITNLLLKV+VKE
Sbjct: 23  IPYSSFVVDTSLPLPLMIPRIIELCKDLFKNWGELDDSLFSVERVSGGITNLLLKVSVKE 82

Query: 86  EDGNEVSVTVRIYGPNTDYVIHRERELQAIKYLSAAGFGAKLLGTYGNGMVQSFINARTL 145
           +   EVSVTVR+YGPNT+YVI+RERE+ AIKYLSAAGFGAKLLG +GNGMVQSFINARTL
Sbjct: 83  DTNKEVSVTVRLYGPNTEYVINREREILAIKYLSAAGFGAKLLGGFGNGMVQSFINARTL 142

Query: 146 TPADMRKPKLAAEIARQLHEFHKVEIPGSKEPQLWNEIFKFYENASILQFDDIEKQRIYE 205
            P+DMR+PK+AA+IAR+L +FHKV+IPGSKEPQLW +I KFYE AS L F++ +KQ+++E
Sbjct: 143 EPSDMREPKIAAQIARELGKFHKVDIPGSKEPQLWVDILKFYEKASTLTFEEPDKQKLFE 202

Query: 206 TISFKEVYNEIVEIK 220
           TISF+E++ EI+E++
Sbjct: 203 TISFEELHKEIIELR 217


>AT1G74320.1 | Symbols:  | choline kinase, putative |
           chr1:27941192-27942903 FORWARD
          Length = 350

 Score = 96.7 bits (239), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 50/143 (34%), Positives = 83/143 (58%), Gaps = 3/143 (2%)

Query: 44  PR-VVELCKDLFKKWSKLDDS-LFSVERVSGGITNLLLKVT-VKEEDGNEVSVTVRIYGP 100
           PR V E  + +  +W  + DS    V  + G +TN + ++     E G    V VRIYG 
Sbjct: 18  PREVKEALQAIASEWEDVIDSKALQVIPLKGAMTNEVFQIKWPTREKGPSRKVLVRIYGE 77

Query: 101 NTDYVIHRERELQAIKYLSAAGFGAKLLGTYGNGMVQSFINARTLTPADMRKPKLAAEIA 160
             +    RE E++  +++S  G G  LLG +GNG ++ F++ARTL+  D+R P+++  IA
Sbjct: 78  GVEIFFDREDEIRTFEFMSKHGHGPLLLGRFGNGRIEEFLHARTLSACDLRDPEISGRIA 137

Query: 161 RQLHEFHKVEIPGSKEPQLWNEI 183
            ++ EFH +E+PG+K+  LW+ +
Sbjct: 138 TRMKEFHGLEMPGAKKALLWDRL 160


>AT1G71697.1 | Symbols: ATCK1, CK | ATCK1 (CHOLINE KINASE 1);
           choline kinase | chr1:26971537-26973177 FORWARD
          Length = 346

 Score = 87.0 bits (214), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 54/162 (33%), Positives = 88/162 (54%), Gaps = 7/162 (4%)

Query: 36  SLSLPQMAPRVVELCKDLFKKWSKLDDSLFSVERV--SGGITNLLLKVTVKEEDGNEVS- 92
           S S P+   RV++    L   W  + + L  +E V   G +TN + ++     +G +V  
Sbjct: 12  SCSSPEDLKRVLQT---LGSSWGDVVEDLERLEVVPLKGAMTNEVYQINWPTLNGEDVHR 68

Query: 93  -VTVRIYGPNTDYVIHRERELQAIKYLSAAGFGAKLLGTYGNGMVQSFINARTLTPADMR 151
            V VRIYG   D   +R  E++  + +S  G+G KLLG + +G ++ FI+ARTL+  D+R
Sbjct: 69  KVLVRIYGDGVDLFFNRGDEIKTFECMSHHGYGPKLLGRFSDGRLEEFIHARTLSADDLR 128

Query: 152 KPKLAAEIARQLHEFHKVEIPGSKEPQLWNEIFKFYENASIL 193
             + +  IA +L EFHK+++PG K   LW  +  + + A  L
Sbjct: 129 VAETSDFIAAKLREFHKLDMPGPKNVLLWERLRTWLKEAKNL 170


>AT4G09760.3 | Symbols:  | choline kinase, putative |
           chr4:6149592-6151150 REVERSE
          Length = 255

 Score = 85.9 bits (211), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 93/177 (52%), Gaps = 14/177 (7%)

Query: 39  LPQMAP-RVVELCKDLFKKWSKLDDSLFSVE--RVSGGITNLLLKVT--VKEEDGNEVSV 93
           +P  +P  + ++ + L  KW  + +   S+E   + G +TN +  V+   KE +     +
Sbjct: 9   IPSSSPDELRKILQALSTKWGDVVEDFESLEVKPMKGAMTNEVFMVSWPRKETNLRCRKL 68

Query: 94  TVRIYGPNTDYVIHRERELQAIKYLSAAGFGAKLLGTYGNGMVQSFINARTLTPADMRKP 153
            VR+YG   +   +R+ E++  +Y++  G G  LLG +  G V+ FI+ARTL+  D+R P
Sbjct: 69  LVRVYGEGVELFFNRDDEIRTFEYVARHGHGPTLLGRFAGGRVEEFIHARTLSATDLRDP 128

Query: 154 KLAAEIARQLHEFHKVEIPGSKEPQLWNEIFKFY---------ENASILQFDDIEKQ 201
            ++A +A +L  FH + IPG +   +W+ +  +          E+++    DDIE +
Sbjct: 129 NISALVASKLRRFHSIHIPGDRIMLIWDRMRTWVGQAKNLCSNEHSTEFGLDDIEDE 185


>AT4G09760.1 | Symbols:  | choline kinase, putative |
           chr4:6148955-6151150 REVERSE
          Length = 346

 Score = 85.5 bits (210), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 49/177 (27%), Positives = 93/177 (52%), Gaps = 14/177 (7%)

Query: 39  LPQMAP-RVVELCKDLFKKWSKLDDSLFSVE--RVSGGITNLLLKVTVKEEDGNEVS--V 93
           +P  +P  + ++ + L  KW  + +   S+E   + G +TN +  V+   ++ N     +
Sbjct: 9   IPSSSPDELRKILQALSTKWGDVVEDFESLEVKPMKGAMTNEVFMVSWPRKETNLRCRKL 68

Query: 94  TVRIYGPNTDYVIHRERELQAIKYLSAAGFGAKLLGTYGNGMVQSFINARTLTPADMRKP 153
            VR+YG   +   +R+ E++  +Y++  G G  LLG +  G V+ FI+ARTL+  D+R P
Sbjct: 69  LVRVYGEGVELFFNRDDEIRTFEYVARHGHGPTLLGRFAGGRVEEFIHARTLSATDLRDP 128

Query: 154 KLAAEIARQLHEFHKVEIPGSKEPQLWNEIFKFY---------ENASILQFDDIEKQ 201
            ++A +A +L  FH + IPG +   +W+ +  +          E+++    DDIE +
Sbjct: 129 NISALVASKLRRFHSIHIPGDRIMLIWDRMRTWVGQAKNLCSNEHSTEFGLDDIEDE 185


>AT4G09760.2 | Symbols:  | choline kinase, putative |
           chr4:6148955-6151150 REVERSE
          Length = 346

 Score = 85.5 bits (210), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 49/177 (27%), Positives = 93/177 (52%), Gaps = 14/177 (7%)

Query: 39  LPQMAP-RVVELCKDLFKKWSKLDDSLFSVE--RVSGGITNLLLKVTVKEEDGNEVS--V 93
           +P  +P  + ++ + L  KW  + +   S+E   + G +TN +  V+   ++ N     +
Sbjct: 9   IPSSSPDELRKILQALSTKWGDVVEDFESLEVKPMKGAMTNEVFMVSWPRKETNLRCRKL 68

Query: 94  TVRIYGPNTDYVIHRERELQAIKYLSAAGFGAKLLGTYGNGMVQSFINARTLTPADMRKP 153
            VR+YG   +   +R+ E++  +Y++  G G  LLG +  G V+ FI+ARTL+  D+R P
Sbjct: 69  LVRVYGEGVELFFNRDDEIRTFEYVARHGHGPTLLGRFAGGRVEEFIHARTLSATDLRDP 128

Query: 154 KLAAEIARQLHEFHKVEIPGSKEPQLWNEIFKFY---------ENASILQFDDIEKQ 201
            ++A +A +L  FH + IPG +   +W+ +  +          E+++    DDIE +
Sbjct: 129 NISALVASKLRRFHSIHIPGDRIMLIWDRMRTWVGQAKNLCSNEHSTEFGLDDIEDE 185