Jatropha Genome Database

JcCA0308971.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0308971.10 + phase: 2 /partial
         (377 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G23190.1 | Symbols:  | phosphoglucomutase, cytoplasmic, putat...   680   0.0  
AT1G70730.1 | Symbols:  | phosphoglucomutase, cytoplasmic, putat...   666   0.0  
AT1G70730.3 | Symbols:  | phosphoglucomutase, cytoplasmic, putat...   665   0.0  
AT1G70730.2 | Symbols:  | phosphoglucomutase, cytoplasmic, putat...   665   0.0  
AT5G51820.1 | Symbols: PGM, ATPGMP, PGM1, STF1 | PGM (PHOSPHOGLU...   454   e-128

>AT1G23190.1 | Symbols:  | phosphoglucomutase, cytoplasmic, putative
           / glucose phosphomutase, putative | chr1:8219946-8224186
           FORWARD
          Length = 583

 Score =  680 bits (1754), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 328/378 (86%), Positives = 346/378 (91%), Gaps = 1/378 (0%)

Query: 1   SIFDFESIRKLLSSPKFTFCYDALHGVAGAYAKRIFVEELGAQGSSLLNCVPKEDFGGGH 60
           SIFDFE+IRKLLSSPKFTFCYDALHGVAGAYA RIFVEELGAQ S+LLNC PKEDFGGGH
Sbjct: 206 SIFDFEAIRKLLSSPKFTFCYDALHGVAGAYAHRIFVEELGAQESALLNCTPKEDFGGGH 265

Query: 61  PDPNLTYAKELVARMGLGKSNSEVEPPEFGAAADGDADRNMILGKRFFVTPSDSXXXXXX 120
           PDPNLTYAKELVARMGLGKS++  EPPEFGAAADGDADRNMILGKRFFVTPSDS      
Sbjct: 266 PDPNLTYAKELVARMGLGKSDTGGEPPEFGAAADGDADRNMILGKRFFVTPSDSVAIIAA 325

Query: 121 XXXXXXPYFSAGLKGVARSMPTSAALDVVAKHLNLKFFEVPTGWKFFGNLMDAGLCSVCG 180
                 PYFS+GLKGVARSMPTSAALDVVAK LNLKFFEVPTGWKFFGNLMDAG+CSVCG
Sbjct: 326 NAIGAIPYFSSGLKGVARSMPTSAALDVVAKSLNLKFFEVPTGWKFFGNLMDAGMCSVCG 385

Query: 181 EESFGTGSDHIREKDGIWAVLAWLSILAHKNKENLNG-GKLVTVEDIVRNHWAFYGRHYY 239
           EESFGTGSDHIREKDGIWAVLAW+SILAHKNK N++G  KLV+VEDIVR HWA YGRHYY
Sbjct: 386 EESFGTGSDHIREKDGIWAVLAWMSILAHKNKGNIDGNAKLVSVEDIVRQHWATYGRHYY 445

Query: 240 TRYDYENVDASAAKELMAHLVNLQSSLGEVNKIVKGVRSDVSNVVHADEFEYKDPVDGSI 299
           TRYDYENVDA  AKELM HLV LQSS+ EVNKIVKG+RSDV++V  ADEFEYKDPVDGSI
Sbjct: 446 TRYDYENVDAGKAKELMEHLVKLQSSIPEVNKIVKGIRSDVASVASADEFEYKDPVDGSI 505

Query: 300 SSHQGIRYLFEDGSRLVFRLSGTGSEGATIRLYIEQYEKDPSKTGRDSQEALAPLVDVAL 359
           S HQGIRYLFEDGSRLVFRLSGTGSEGATIRLYIEQYEKD SKTGR+SQEAL+PLVD+AL
Sbjct: 506 SKHQGIRYLFEDGSRLVFRLSGTGSEGATIRLYIEQYEKDASKTGRESQEALSPLVDLAL 565

Query: 360 KLSKMQEFTGRSAPTVIT 377
           KLSKM+EFTGRSAPTVIT
Sbjct: 566 KLSKMEEFTGRSAPTVIT 583


>AT1G70730.1 | Symbols:  | phosphoglucomutase, cytoplasmic, putative
           / glucose phosphomutase, putative |
           chr1:26669020-26672726 REVERSE
          Length = 585

 Score =  666 bits (1718), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 325/379 (85%), Positives = 341/379 (89%), Gaps = 2/379 (0%)

Query: 1   SIFDFESIRKLLSSPKFTFCYDALHGVAGAYAKRIFVEELGAQGSSLLNCVPKEDFGGGH 60
           SIFDFESI+KLLS PKFTFCYDALHGVAGAYA RIFVEELGA  SSLLNCVPKEDFGGGH
Sbjct: 207 SIFDFESIKKLLSYPKFTFCYDALHGVAGAYAHRIFVEELGAPESSLLNCVPKEDFGGGH 266

Query: 61  PDPNLTYAKELVARMGLGKSN-SEVEPPEFGAAADGDADRNMILGKRFFVTPSDSXXXXX 119
           PDPNLTYAKELVARMGL K++ +  EPPEFGAAADGDADRNMILGKRFFVTPSDS     
Sbjct: 267 PDPNLTYAKELVARMGLSKTDDAGGEPPEFGAAADGDADRNMILGKRFFVTPSDSVAIIA 326

Query: 120 XXXXXXXPYFSAGLKGVARSMPTSAALDVVAKHLNLKFFEVPTGWKFFGNLMDAGLCSVC 179
                  PYFS+GLKGVARSMPTSAALDVVAK+L LKFFEVPTGWKFFGNLMDAG+CSVC
Sbjct: 327 ANAVGAIPYFSSGLKGVARSMPTSAALDVVAKNLGLKFFEVPTGWKFFGNLMDAGMCSVC 386

Query: 180 GEESFGTGSDHIREKDGIWAVLAWLSILAHKNKENLNG-GKLVTVEDIVRNHWAFYGRHY 238
           GEESFGTGSDHIREKDGIWAVLAWLSILAHKNKE L+G  KLVTVEDIVR HWA YGRHY
Sbjct: 387 GEESFGTGSDHIREKDGIWAVLAWLSILAHKNKETLDGNAKLVTVEDIVRQHWATYGRHY 446

Query: 239 YTRYDYENVDASAAKELMAHLVNLQSSLGEVNKIVKGVRSDVSNVVHADEFEYKDPVDGS 298
           YTRYDYENVDA+AAKELM  LV LQSSL EVNKI+KG+  +V+NV  ADEFEYKDPVDGS
Sbjct: 447 YTRYDYENVDATAAKELMGLLVKLQSSLPEVNKIIKGIHPEVANVASADEFEYKDPVDGS 506

Query: 299 ISSHQGIRYLFEDGSRLVFRLSGTGSEGATIRLYIEQYEKDPSKTGRDSQEALAPLVDVA 358
           +S HQGIRYLFEDGSRLVFRLSGTGSEGATIRLYIEQYEKD SK GRDSQ+AL PLVDVA
Sbjct: 507 VSKHQGIRYLFEDGSRLVFRLSGTGSEGATIRLYIEQYEKDASKIGRDSQDALGPLVDVA 566

Query: 359 LKLSKMQEFTGRSAPTVIT 377
           LKLSKMQEFTGRS+PTVIT
Sbjct: 567 LKLSKMQEFTGRSSPTVIT 585


>AT1G70730.3 | Symbols:  | phosphoglucomutase, cytoplasmic, putative
           / glucose phosphomutase, putative |
           chr1:26669020-26673166 REVERSE
          Length = 662

 Score =  665 bits (1716), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 325/379 (85%), Positives = 341/379 (89%), Gaps = 2/379 (0%)

Query: 1   SIFDFESIRKLLSSPKFTFCYDALHGVAGAYAKRIFVEELGAQGSSLLNCVPKEDFGGGH 60
           SIFDFESI+KLLS PKFTFCYDALHGVAGAYA RIFVEELGA  SSLLNCVPKEDFGGGH
Sbjct: 284 SIFDFESIKKLLSYPKFTFCYDALHGVAGAYAHRIFVEELGAPESSLLNCVPKEDFGGGH 343

Query: 61  PDPNLTYAKELVARMGLGKSN-SEVEPPEFGAAADGDADRNMILGKRFFVTPSDSXXXXX 119
           PDPNLTYAKELVARMGL K++ +  EPPEFGAAADGDADRNMILGKRFFVTPSDS     
Sbjct: 344 PDPNLTYAKELVARMGLSKTDDAGGEPPEFGAAADGDADRNMILGKRFFVTPSDSVAIIA 403

Query: 120 XXXXXXXPYFSAGLKGVARSMPTSAALDVVAKHLNLKFFEVPTGWKFFGNLMDAGLCSVC 179
                  PYFS+GLKGVARSMPTSAALDVVAK+L LKFFEVPTGWKFFGNLMDAG+CSVC
Sbjct: 404 ANAVGAIPYFSSGLKGVARSMPTSAALDVVAKNLGLKFFEVPTGWKFFGNLMDAGMCSVC 463

Query: 180 GEESFGTGSDHIREKDGIWAVLAWLSILAHKNKENLNG-GKLVTVEDIVRNHWAFYGRHY 238
           GEESFGTGSDHIREKDGIWAVLAWLSILAHKNKE L+G  KLVTVEDIVR HWA YGRHY
Sbjct: 464 GEESFGTGSDHIREKDGIWAVLAWLSILAHKNKETLDGNAKLVTVEDIVRQHWATYGRHY 523

Query: 239 YTRYDYENVDASAAKELMAHLVNLQSSLGEVNKIVKGVRSDVSNVVHADEFEYKDPVDGS 298
           YTRYDYENVDA+AAKELM  LV LQSSL EVNKI+KG+  +V+NV  ADEFEYKDPVDGS
Sbjct: 524 YTRYDYENVDATAAKELMGLLVKLQSSLPEVNKIIKGIHPEVANVASADEFEYKDPVDGS 583

Query: 299 ISSHQGIRYLFEDGSRLVFRLSGTGSEGATIRLYIEQYEKDPSKTGRDSQEALAPLVDVA 358
           +S HQGIRYLFEDGSRLVFRLSGTGSEGATIRLYIEQYEKD SK GRDSQ+AL PLVDVA
Sbjct: 584 VSKHQGIRYLFEDGSRLVFRLSGTGSEGATIRLYIEQYEKDASKIGRDSQDALGPLVDVA 643

Query: 359 LKLSKMQEFTGRSAPTVIT 377
           LKLSKMQEFTGRS+PTVIT
Sbjct: 644 LKLSKMQEFTGRSSPTVIT 662


>AT1G70730.2 | Symbols:  | phosphoglucomutase, cytoplasmic, putative
           / glucose phosphomutase, putative |
           chr1:26669020-26673166 REVERSE
          Length = 605

 Score =  665 bits (1716), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 325/379 (85%), Positives = 341/379 (89%), Gaps = 2/379 (0%)

Query: 1   SIFDFESIRKLLSSPKFTFCYDALHGVAGAYAKRIFVEELGAQGSSLLNCVPKEDFGGGH 60
           SIFDFESI+KLLS PKFTFCYDALHGVAGAYA RIFVEELGA  SSLLNCVPKEDFGGGH
Sbjct: 227 SIFDFESIKKLLSYPKFTFCYDALHGVAGAYAHRIFVEELGAPESSLLNCVPKEDFGGGH 286

Query: 61  PDPNLTYAKELVARMGLGKSN-SEVEPPEFGAAADGDADRNMILGKRFFVTPSDSXXXXX 119
           PDPNLTYAKELVARMGL K++ +  EPPEFGAAADGDADRNMILGKRFFVTPSDS     
Sbjct: 287 PDPNLTYAKELVARMGLSKTDDAGGEPPEFGAAADGDADRNMILGKRFFVTPSDSVAIIA 346

Query: 120 XXXXXXXPYFSAGLKGVARSMPTSAALDVVAKHLNLKFFEVPTGWKFFGNLMDAGLCSVC 179
                  PYFS+GLKGVARSMPTSAALDVVAK+L LKFFEVPTGWKFFGNLMDAG+CSVC
Sbjct: 347 ANAVGAIPYFSSGLKGVARSMPTSAALDVVAKNLGLKFFEVPTGWKFFGNLMDAGMCSVC 406

Query: 180 GEESFGTGSDHIREKDGIWAVLAWLSILAHKNKENLNG-GKLVTVEDIVRNHWAFYGRHY 238
           GEESFGTGSDHIREKDGIWAVLAWLSILAHKNKE L+G  KLVTVEDIVR HWA YGRHY
Sbjct: 407 GEESFGTGSDHIREKDGIWAVLAWLSILAHKNKETLDGNAKLVTVEDIVRQHWATYGRHY 466

Query: 239 YTRYDYENVDASAAKELMAHLVNLQSSLGEVNKIVKGVRSDVSNVVHADEFEYKDPVDGS 298
           YTRYDYENVDA+AAKELM  LV LQSSL EVNKI+KG+  +V+NV  ADEFEYKDPVDGS
Sbjct: 467 YTRYDYENVDATAAKELMGLLVKLQSSLPEVNKIIKGIHPEVANVASADEFEYKDPVDGS 526

Query: 299 ISSHQGIRYLFEDGSRLVFRLSGTGSEGATIRLYIEQYEKDPSKTGRDSQEALAPLVDVA 358
           +S HQGIRYLFEDGSRLVFRLSGTGSEGATIRLYIEQYEKD SK GRDSQ+AL PLVDVA
Sbjct: 527 VSKHQGIRYLFEDGSRLVFRLSGTGSEGATIRLYIEQYEKDASKIGRDSQDALGPLVDVA 586

Query: 359 LKLSKMQEFTGRSAPTVIT 377
           LKLSKMQEFTGRS+PTVIT
Sbjct: 587 LKLSKMQEFTGRSSPTVIT 605


>AT5G51820.1 | Symbols: PGM, ATPGMP, PGM1, STF1 | PGM
           (PHOSPHOGLUCOMUTASE); phosphoglucomutase |
           chr5:21063531-21067933 REVERSE
          Length = 623

 Score =  454 bits (1168), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 225/380 (59%), Positives = 281/380 (73%), Gaps = 20/380 (5%)

Query: 2   IFDFESIRKLLSSPKFTFCYDALHGVAGAYAKRIFVEELGAQGSSLLNCVPKEDFGGGHP 61
           +FDF+ IR LLS   F F +DA+H V GAYAK IFV+ LGA+  S+ N VP EDFG GHP
Sbjct: 260 VFDFDLIRGLLSRSDFGFMFDAMHAVTGAYAKPIFVDNLGAKPDSISNGVPLEDFGHGHP 319

Query: 62  DPNLTYAKELVARMGLGKSNSEVEPPEFGAAADGDADRNMILGKRFFVTPSDSXXXXXXX 121
           DPNLTYAK+LV  M   + N     P+FGAA+DGD DRNM+LG +FFVTPSDS       
Sbjct: 320 DPNLTYAKDLVDVMY--RDNG----PDFGAASDGDGDRNMVLGNKFFVTPSDSVAIIAAN 373

Query: 122 XXXXXPYFSAGLKGVARSMPTSAALDVVAKHLNLKFFEVPTGWKFFGNLMDAGLCSVCGE 181
                PYF AG KG+ARSMPTS ALD VA+ L L FFEVPTGWKFFGNLMDAG  S+CGE
Sbjct: 374 AQEAIPYFRAGPKGLARSMPTSGALDRVAEKLKLPFFEVPTGWKFFGNLMDAGKLSICGE 433

Query: 182 ESFGTGSDHIREKDGIWAVLAWLSILAHKNKENLNGGKLVTVEDIVRNHWAFYGRHYYTR 241
           ESFGTGSDHIREKDGIWAVLAWLSILAH+NK+   G KLV+V D+V+ +WA YGR++++R
Sbjct: 434 ESFGTGSDHIREKDGIWAVLAWLSILAHRNKDTKPGDKLVSVADVVKEYWATYGRNFFSR 493

Query: 242 YDYENVDASAAKELMAHLVNL--QSSLGEV--NKIVKGVRSDVSNVVHADEFEYKDPVDG 297
           YDYE  ++  A +++ +L  +  +S  G+V  N +++           AD+F Y DPVDG
Sbjct: 494 YDYEECESEGANKMIEYLREILSKSKAGDVYGNYVLQ----------FADDFSYTDPVDG 543

Query: 298 SISSHQGIRYLFEDGSRLVFRLSGTGSEGATIRLYIEQYEKDPSKTGRDSQEALAPLVDV 357
           S++S QG+R++F DGSR++FRLSGTGS GAT+R+YIEQ+E D SK   D+Q AL PL+D+
Sbjct: 544 SVASKQGVRFVFTDGSRIIFRLSGTGSAGATVRIYIEQFEPDVSKHDVDAQIALKPLIDL 603

Query: 358 ALKLSKMQEFTGRSAPTVIT 377
           AL +SK+++FTGR  PTVIT
Sbjct: 604 ALSVSKLKDFTGREKPTVIT 623