Jatropha Genome Database

JcCA0308861.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0308861.20 - phase: 0 
         (133 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G62980.1 | Symbols:  | dihydroneopterin aldolase, putative | ...   165   9e-42
AT3G11750.1 | Symbols:  | dihydroneopterin aldolase, putative | ...   163   2e-41
AT3G21730.2 | Symbols:  | dihydroneopterin aldolase family prote...   142   6e-35
AT3G21730.1 | Symbols:  | dihydroneopterin aldolase family prote...   142   7e-35

>AT5G62980.1 | Symbols:  | dihydroneopterin aldolase, putative |
           chr5:25276384-25277083 FORWARD
          Length = 131

 Score =  165 bits (417), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 79/131 (60%), Positives = 101/131 (77%), Gaps = 1/131 (0%)

Query: 1   MENDEIMGGDKLILRGLKFHGFHGVKPEERTLGQKFLIDVDAWMDLREAGKTDRLSDTIS 60
           ME D  M GDKLILRGLKF+GFHG  PEE+TLGQ F++D+DAWM L++AG +D L+D++S
Sbjct: 1   MEKDMAMMGDKLILRGLKFYGFHGAIPEEKTLGQMFMLDIDAWMCLKKAGLSDNLADSVS 60

Query: 61  YTEIYRIVKEVVEGAPHNLLESVAHKIASTTLTKYPQISAVRVKVGKPHVA-VHGPLDYL 119
           Y +IY + KEVVEG+  NLLE VA  IAS TL   P+I+AVRVK+ KP+VA +   +DYL
Sbjct: 61  YVDIYNVAKEVVEGSSRNLLERVAGLIASKTLEISPRITAVRVKLWKPNVALIQSTIDYL 120

Query: 120 GVEILRRRSID 130
           GVEI R R+ +
Sbjct: 121 GVEIFRDRATE 131


>AT3G11750.1 | Symbols:  | dihydroneopterin aldolase, putative |
           chr3:3715071-3715904 REVERSE
          Length = 146

 Score =  163 bits (413), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 77/129 (59%), Positives = 102/129 (79%), Gaps = 1/129 (0%)

Query: 1   MENDEIMGGDKLILRGLKFHGFHGVKPEERTLGQKFLIDVDAWMDLREAGKTDRLSDTIS 60
           +E  E   GDKLIL+GLKF+GFHG   EERTLGQ FL+D+DAW+ L++AG++D L DTIS
Sbjct: 13  LERRESNLGDKLILKGLKFYGFHGAIAEERTLGQMFLVDIDAWVSLKKAGESDNLEDTIS 72

Query: 61  YTEIYRIVKEVVEGAPHNLLESVAHKIASTTLTKYPQISAVRVKVGKPHVA-VHGPLDYL 119
           Y +I+ + KE+VEG+P NLLE+VA  IAS TL K+ QI+AVRVK+ KP+VA +   +DYL
Sbjct: 73  YVDIFSLAKEIVEGSPRNLLETVAELIASKTLEKFHQINAVRVKLSKPNVALIKSTIDYL 132

Query: 120 GVEILRRRS 128
           GV+I R+R+
Sbjct: 133 GVDIFRQRN 141


>AT3G21730.2 | Symbols:  | dihydroneopterin aldolase family protein
           | chr3:7659761-7661179 REVERSE
          Length = 156

 Score =  142 bits (358), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 64/128 (50%), Positives = 97/128 (75%), Gaps = 1/128 (0%)

Query: 2   ENDEIMGGDKLILRGLKFHGFHGVKPEERTLGQKFLIDVDAWMDLREAGKTDRLSDTISY 61
           E+ E +  DKLILRGLKF+GFHGV PEER LG  F++D++ W+ L++A ++D L+DT+S+
Sbjct: 28  ESLESLPEDKLILRGLKFYGFHGVLPEERELGGLFIVDINLWLSLKKAIESDNLADTVSF 87

Query: 62  TEIYRIVKEVVEGAPHNLLESVAHKIASTTLTKYPQISAVRVKVGKPHVA-VHGPLDYLG 120
            + +R+VK++VEG P NL E+VA  IAS  L  +P+I+ +RVK GKP+ + V+  +D+LG
Sbjct: 88  ADTFRLVKKIVEGPPRNLYETVADDIASEMLETFPKINVIRVKFGKPNPSLVNSTVDFLG 147

Query: 121 VEILRRRS 128
            E+ R+R+
Sbjct: 148 AELFRKRN 155


>AT3G21730.1 | Symbols:  | dihydroneopterin aldolase family protein
           | chr3:7659761-7661179 REVERSE
          Length = 160

 Score =  142 bits (357), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 64/128 (50%), Positives = 97/128 (75%), Gaps = 1/128 (0%)

Query: 2   ENDEIMGGDKLILRGLKFHGFHGVKPEERTLGQKFLIDVDAWMDLREAGKTDRLSDTISY 61
           E+ E +  DKLILRGLKF+GFHGV PEER LG  F++D++ W+ L++A ++D L+DT+S+
Sbjct: 32  ESLESLPEDKLILRGLKFYGFHGVLPEERELGGLFIVDINLWLSLKKAIESDNLADTVSF 91

Query: 62  TEIYRIVKEVVEGAPHNLLESVAHKIASTTLTKYPQISAVRVKVGKPHVA-VHGPLDYLG 120
            + +R+VK++VEG P NL E+VA  IAS  L  +P+I+ +RVK GKP+ + V+  +D+LG
Sbjct: 92  ADTFRLVKKIVEGPPRNLYETVADDIASEMLETFPKINVIRVKFGKPNPSLVNSTVDFLG 151

Query: 121 VEILRRRS 128
            E+ R+R+
Sbjct: 152 AELFRKRN 159