Jatropha Genome Database

JcCA0308831.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0308831.10 - phase: 0 
         (151 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G20670.1 | Symbols:  | unknown protein | chr5:6993332-6993793...   148   1e-36
AT1G72510.2 | Symbols:  | unknown protein | chr1:27303906-273044...   137   2e-33
AT1G72510.1 | Symbols:  | unknown protein | chr1:27303906-273044...   137   2e-33
AT2G09970.1 | Symbols:  | unknown protein | chr2:3780172-3780672...   123   4e-29
AT3G22540.1 | Symbols:  | unknown protein | chr3:7984233-7984565...    90   6e-19
AT4G14819.1 | Symbols:  | unknown protein | chr4:8507365-8507679...    87   4e-18
AT1G54095.1 | Symbols:  | unknown protein | chr1:20193271-201937...    81   2e-16
AT5G25840.1 | Symbols:  | unknown protein | chr5:9010909-9011430...    75   1e-14
AT1G79770.1 | Symbols:  | unknown protein | chr1:30014371-300148...    74   4e-14
AT2G25780.1 | Symbols:  | unknown protein | chr2:10995169-109959...    68   2e-12

>AT5G20670.1 | Symbols:  | unknown protein | chr5:6993332-6993793
           REVERSE
          Length = 153

 Score =  148 bits (373), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 85/154 (55%), Positives = 109/154 (70%), Gaps = 6/154 (3%)

Query: 1   MAISAAETQSNPTTKPNTQL-EVESVKCYSCGFTEECTPAYISRVRERFNGRWLCGLCVE 59
           M+ S++ + ++  TKP++ L  VESV C +CGF EECTPAYI+RV+ER  G WLCGLC E
Sbjct: 1   MSSSSSSSATDTNTKPSSSLPAVESVTCDTCGFAEECTPAYINRVKERHKGHWLCGLCAE 60

Query: 60  AVKDEVLRSDRLISTEEALNRHINFCNKFKSSIPLHQTEHPIFVMSRILRRSLD-SPR-- 116
           AVKDEV+RS   IS EEAL RH  FC++F+S  P  + E PI V+ RILRRSLD SPR  
Sbjct: 61  AVKDEVVRSSTRISVEEALRRHTTFCHRFRSWSP-DEEEDPISVIGRILRRSLDGSPRRT 119

Query: 117 ALRSNSSSVLPDVDVEKIKGSALVRSESCFSALS 150
             R++SS  LP +D  + + S L+RS SCF +LS
Sbjct: 120 NTRTSSSGALPGIDGVESRRS-LLRSGSCFPSLS 152


>AT1G72510.2 | Symbols:  | unknown protein | chr1:27303906-27304403
           FORWARD
          Length = 165

 Score =  137 bits (346), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 73/133 (54%), Positives = 92/133 (69%), Gaps = 3/133 (2%)

Query: 21  EVESVKCYSCGFTEECTPAYISRVRERFNGRWLCGLCVEAVKDEVLRSDRLISTEEALNR 80
           E +SV C  CG TEECT +YI  VRER+ G+W+CGLC EAVK EV+R+ RL++TEEA+ R
Sbjct: 33  EPDSVTCDCCGLTEECTQSYIEMVRERYMGKWICGLCSEAVKYEVMRTKRLLTTEEAMAR 92

Query: 81  HINFCNKFK-SSIPLHQTEHPIFVMSRILRRSLDSPRALRS--NSSSVLPDVDVEKIKGS 137
           H+N CNKFK SS P + T H I  M +ILR+SLDSPR LRS  NS S            +
Sbjct: 93  HMNMCNKFKSSSPPPNPTGHLISAMRQILRKSLDSPRMLRSMPNSPSKDDQDHHHDCVSN 152

Query: 138 ALVRSESCFSALS 150
            L RS+SCF++L+
Sbjct: 153 VLSRSDSCFASLT 165


>AT1G72510.1 | Symbols:  | unknown protein | chr1:27303906-27304403
           FORWARD
          Length = 165

 Score =  137 bits (346), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 73/133 (54%), Positives = 92/133 (69%), Gaps = 3/133 (2%)

Query: 21  EVESVKCYSCGFTEECTPAYISRVRERFNGRWLCGLCVEAVKDEVLRSDRLISTEEALNR 80
           E +SV C  CG TEECT +YI  VRER+ G+W+CGLC EAVK EV+R+ RL++TEEA+ R
Sbjct: 33  EPDSVTCDCCGLTEECTQSYIEMVRERYMGKWICGLCSEAVKYEVMRTKRLLTTEEAMAR 92

Query: 81  HINFCNKFK-SSIPLHQTEHPIFVMSRILRRSLDSPRALRS--NSSSVLPDVDVEKIKGS 137
           H+N CNKFK SS P + T H I  M +ILR+SLDSPR LRS  NS S            +
Sbjct: 93  HMNMCNKFKSSSPPPNPTGHLISAMRQILRKSLDSPRMLRSMPNSPSKDDQDHHHDCVSN 152

Query: 138 ALVRSESCFSALS 150
            L RS+SCF++L+
Sbjct: 153 VLSRSDSCFASLT 165


>AT2G09970.1 | Symbols:  | unknown protein | chr2:3780172-3780672
           REVERSE
          Length = 166

 Score =  123 bits (309), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 70/145 (48%), Positives = 96/145 (66%), Gaps = 7/145 (4%)

Query: 13  TTKPNTQL---EVESVKCYSCGFTEECTPAYISRVRERFNGRWLCGLCVEAVKDEVLRSD 69
           +T P TQ+   E++SV C  CG T+ECT +Y   +RER+ G+W+ G C EAVK +V+R+ 
Sbjct: 22  STVPVTQISSDELDSVTCDCCGLTDECTESYTEMIRERYIGKWISGFCSEAVKYKVMRTK 81

Query: 70  RLIST-EEALNRHINFCNKFKSSI-PLHQTEHPIFVMSRILRRSLDSPRALRS--NSSSV 125
           R ++T EEA+ RH+N CNKFKSS  P + T H I  M +ILR+SLDSPR LRS  NS S 
Sbjct: 82  RFLTTEEEAMARHMNKCNKFKSSSPPSNLTRHLISAMRQILRKSLDSPRMLRSMPNSPSK 141

Query: 126 LPDVDVEKIKGSALVRSESCFSALS 150
               +      + L RS+SCF++L+
Sbjct: 142 DDQDNHHDCVSNVLSRSDSCFASLT 166


>AT3G22540.1 | Symbols:  | unknown protein | chr3:7984233-7984565
           REVERSE
          Length = 110

 Score = 89.7 bits (221), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 42/91 (46%), Positives = 59/91 (64%), Gaps = 4/91 (4%)

Query: 20  LEVESVKCYSCGFTEECTPAYISRVRERFNGRWLCGLCVEAVKDEVLRSDRLISTEEALN 79
           +E+ESV+C  CG  E+CT  YIS V+  F+ +WLCGLC EAV+DEV R  ++ + +EA+ 
Sbjct: 1   MEIESVRCECCGLMEDCTQDYISEVKSNFDNKWLCGLCSEAVRDEVSRR-KMTTVDEAVK 59

Query: 80  RHINFCNKFKSSIPLHQTEHPIFVMSRILRR 110
            H++FC KFK   P     H    M ++LRR
Sbjct: 60  AHVSFCGKFKKDNP---AVHVADGMRQMLRR 87


>AT4G14819.1 | Symbols:  | unknown protein | chr4:8507365-8507679
          FORWARD
          Length = 104

 Score = 87.0 bits (214), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 38/72 (52%), Positives = 51/72 (70%), Gaps = 2/72 (2%)

Query: 20 LEVESVKCYSCGFTEECTPAYISRVRERFNGRWLCGLCVEAVKDEVLRSDRLISTEEALN 79
          +E+ESV C  CG  E+CT  YIS+V+  F G+WLCGLC EAV DE  RS + +  EEA+N
Sbjct: 1  MEIESVTCECCGLMEDCTQHYISKVKANFAGKWLCGLCSEAVSDEFSRSSKTV--EEAVN 58

Query: 80 RHINFCNKFKSS 91
           H++FC KF ++
Sbjct: 59 AHMSFCGKFNAN 70


>AT1G54095.1 | Symbols:  | unknown protein | chr1:20193271-20193723
           FORWARD
          Length = 150

 Score = 81.3 bits (199), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 56/143 (39%), Positives = 81/143 (56%), Gaps = 12/143 (8%)

Query: 14  TKPNTQLEVESVKCYSCGFTEECTPAYISRVRERFNGRWLCGLCVEAVKDEVLR---SDR 70
           +KP+   EV   +C  CG  EE T  YI  VR  + G+++CGLC EAVK E+ R     R
Sbjct: 11  SKPS---EVGFARCECCGMKEEYTAGYIESVRCLYAGKFICGLCSEAVKYEIFRCGKKQR 67

Query: 71  LISTEEALNRHINFCNKFKSSIPLHQTEHPIFVMSRILRRS--LDSPRALRSNSSSVLPD 128
            I  +EAL  H+ FC++F +S P   T   IF +  I +R   L+ P  L S ++S+ P 
Sbjct: 68  RIGVDEALAIHMKFCSEFVAS-P-SPTVDFIFAIGEIFKRRLILNLPSVLTS-AASLPPA 124

Query: 129 VDVEKIKGSALV-RSESCFSALS 150
           VD  ++ G+A++  + SC  ALS
Sbjct: 125 VDGGEVCGTAVIGGAGSCLPALS 147


>AT5G25840.1 | Symbols:  | unknown protein | chr5:9010909-9011430
           REVERSE
          Length = 173

 Score = 75.5 bits (184), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 51/154 (33%), Positives = 81/154 (52%), Gaps = 24/154 (15%)

Query: 9   QSNPTTKPNTQL------EVESVKCYSCGFTEECTPAYISRVRERFNGRWLCGLCVEAVK 62
           + +PT    T L      EVE  KC  CG +EECTP YI RVR +F+G+ +CGLC +AV+
Sbjct: 24  EPSPTATATTLLSLSAISEVEDAKCECCGMSEECTPEYIHRVRSKFSGKLICGLCEKAVE 83

Query: 63  DEVLR---SDRLIST--EEALNRHINFCNKFKSSIPLHQTEHPIFVMSRILRRSLDSPRA 117
            E+ +   S+ L+    EEA+  H++ C++F     L ++ +P+   +  ++        
Sbjct: 84  GEMEKMNNSEVLMEKRREEAVKVHMSACSRFNR---LGRS-YPVLYQAEAVK------EM 133

Query: 118 LRSNSSSVLPDVDVEKIKGSALVRSESCFSALSR 151
           L+  S  ++     EK     L RS SC  AL++
Sbjct: 134 LKKRSKKMVGATKPEK---GGLARSSSCMPALAK 164


>AT1G79770.1 | Symbols:  | unknown protein | chr1:30014371-30014874
           FORWARD
          Length = 167

 Score = 73.6 bits (179), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 53/139 (38%), Positives = 69/139 (49%), Gaps = 25/139 (17%)

Query: 17  NTQLEVESVKCYSCGFTEECTPAYISRVRERFNGRWLCGLCVEAVKDEVLRSDRLISTEE 76
            T +EVE  KC  CG  EECT  YI RVRE+F G+W+CGLC EAVK+E          E 
Sbjct: 47  GTIVEVEKAKCECCGMREECTMEYIERVREKFFGKWICGLCSEAVKEERD-KREEEGLEG 105

Query: 77  ALNRHINFC---NKFKSSIP-LHQTEHPIFVMSRILRRSLDSPRALRSNSSSVLPDVDVE 132
           AL  H++ C   NK     P L Q +     M  +LRRS        +   S++P     
Sbjct: 106 ALKEHMSACLRFNKLGREYPALFQAD----AMRDMLRRS--------TRGQSIIPK---- 149

Query: 133 KIKGSALVRSESCFSALSR 151
                A+ R+ SC  A++R
Sbjct: 150 ----PAISRTSSCIPAITR 164


>AT2G25780.1 | Symbols:  | unknown protein | chr2:10995169-10995923
           FORWARD
          Length = 153

 Score = 68.2 bits (165), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 16/123 (13%)

Query: 25  VKCYSCGFTEECTPAYISRVRERFNGRWLCGLCVEAVKDEVLRSDRLIST--EEALNRHI 82
           VKC  CG  EECT  YI++VR  ++G W+CGLC E V  E LR D  I+   +EA + H 
Sbjct: 39  VKCDCCGIEEECTMQYIAKVRNLYSGNWVCGLCGEVVT-ERLRKDPPIAAGIQEAFDWHK 97

Query: 83  NFCNKFKSSIPLHQTEHPIFVMSRILRRSLDSPRALRSNSSSVLPDVDVEKIKGSALVRS 142
             C+ F S+  +    +P    +R +R       A RS+ + ++ D  +    GS + R+
Sbjct: 98  GICDAFNSTTRV----NPKLDFTRSMREI-----AKRSSQNRMMSDFSI----GSKIART 144

Query: 143 ESC 145
            SC
Sbjct: 145 ISC 147