Jatropha Genome Database
- JcCA0308681.30
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0308681.30 + phase: 2 /partial
(340 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G49970.1 | Symbols: ATPPOX, PDX3 | ATPPOX (A. THALIANA PYRIDO... 503 e-143
AT5G49970.2 | Symbols: ATPPOX | ATPPOX (A. THALIANA PYRIDOXIN (P... 474 e-134
>AT5G49970.1 | Symbols: ATPPOX, PDX3 | ATPPOX (A. THALIANA PYRIDOXIN
(PYRODOXAMINE) 5'-PHOSPHATE OXIDASE);
pyridoxamine-phosphate oxidase | chr5:20329213-20332900
FORWARD
Length = 530
Score = 503 bits (1294), Expect = e-143, Method: Compositional matrix adjust.
Identities = 236/299 (78%), Positives = 262/299 (87%)
Query: 42 ISYLRQREAAEIDEMLMGPLGFSVDQLMELAGLSVATSIEEVYKPSEYNRVLAICGPGNN 101
+SYL QREAAEIDE LMGPLGFS+DQLMELAGLSVA SI EVYKP EY+RVLAICGPGNN
Sbjct: 73 LSYLTQREAAEIDETLMGPLGFSIDQLMELAGLSVAASIAEVYKPEEYSRVLAICGPGNN 132
Query: 102 GGDGLVAARHLHHFGYKPVICYPKRTAKQLYTGLVTQLESLSVPFLAVEDLPLDLSKDFD 161
GGDGLVAARHLHHFGYKP ICYPKRTAK LYTGLVTQL+SLSVPF++VEDLP DLSKDFD
Sbjct: 133 GGDGLVAARHLHHFGYKPFICYPKRTAKPLYTGLVTQLDSLSVPFVSVEDLPDDLSKDFD 192
Query: 162 ILVDAMFGFSFHGAPRPPFDDLIQKLVYLHKCNEVHEKRSVVVSIDIPSGWHVEEGDVGG 221
++VDAMFGFSFHGAPRPPFDDLI++LV L + +K V+VS+DIPSGWHVEEGD
Sbjct: 193 VIVDAMFGFSFHGAPRPPFDDLIRRLVSLQNYEQTLQKHPVIVSVDIPSGWHVEEGDHED 252
Query: 222 EGIKPDMLVSLTAPKLCAKKFSGPHHFLGGRFIPPIIVEKFKLHLPPYPGTSMCVRIGKP 281
GIKPDMLVSLTAPKLCAK+F GPHHFLGGRF+PP + EK+KL LP YPGTSMCVRIGKP
Sbjct: 253 GGIKPDMLVSLTAPKLCAKRFRGPHHFLGGRFVPPSVAEKYKLELPSYPGTSMCVRIGKP 312
Query: 282 PQIDMSALRENYISPEFLEEQVEANPIDQFRKWFDDAVVAGLKEPNAMCLSTVGKDGKP 340
P++D+SA+R NY+SPE LEEQVE +P QFRKWFD+AV AGL+E NAM LST KD KP
Sbjct: 313 PKVDISAMRVNYVSPELLEEQVETDPTVQFRKWFDEAVAAGLRETNAMALSTANKDKKP 371
>AT5G49970.2 | Symbols: ATPPOX | ATPPOX (A. THALIANA PYRIDOXIN
(PYRODOXAMINE) 5'-PHOSPHATE OXIDASE);
pyridoxamine-phosphate oxidase | chr5:20329213-20332473
FORWARD
Length = 466
Score = 474 bits (1219), Expect = e-134, Method: Compositional matrix adjust.
Identities = 225/299 (75%), Positives = 251/299 (83%), Gaps = 11/299 (3%)
Query: 42 ISYLRQREAAEIDEMLMGPLGFSVDQLMELAGLSVATSIEEVYKPSEYNRVLAICGPGNN 101
+SYL QREAAEIDE LMGPLGFS+DQLMELAGLSVA SI EVYKP EY+RVLAICGPGNN
Sbjct: 73 LSYLTQREAAEIDETLMGPLGFSIDQLMELAGLSVAASIAEVYKPEEYSRVLAICGPGNN 132
Query: 102 GGDGLVAARHLHHFGYKPVICYPKRTAKQLYTGLVTQLESLSVPFLAVEDLPLDLSKDFD 161
GGDGLVAARHLHHFGYKP ICYPKRTAK LYTGLVTQL+SLSVPF++VEDLP DLSKDFD
Sbjct: 133 GGDGLVAARHLHHFGYKPFICYPKRTAKPLYTGLVTQLDSLSVPFVSVEDLPDDLSKDFD 192
Query: 162 ILVDAMFGFSFHGAPRPPFDDLIQKLVYLHKCNEVHEKRSVVVSIDIPSGWHVEEGDVGG 221
++VDAMFGFSFHGAPRPPFDDLI++LV L + +K V+VS+DIPSGWHVEEGD
Sbjct: 193 VIVDAMFGFSFHGAPRPPFDDLIRRLVSLQNYEQTLQKHPVIVSVDIPSGWHVEEGDHED 252
Query: 222 EGIKPDMLVSLTAPKLCAKKFSGPHHFLGGRFIPPIIVEKFKLHLPPYPGTSMCVRIGKP 281
GIKPDML +F GPHHFLGGRF+PP + EK+KL LP YPGTSMCVRIGKP
Sbjct: 253 GGIKPDML-----------RFRGPHHFLGGRFVPPSVAEKYKLELPSYPGTSMCVRIGKP 301
Query: 282 PQIDMSALRENYISPEFLEEQVEANPIDQFRKWFDDAVVAGLKEPNAMCLSTVGKDGKP 340
P++D+SA+R NY+SPE LEEQVE +P QFRKWFD+AV AGL+E NAM LST KD KP
Sbjct: 302 PKVDISAMRVNYVSPELLEEQVETDPTVQFRKWFDEAVAAGLRETNAMALSTANKDKKP 360