Jatropha Genome Database

JcCA0307631.30
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0307631.30 - phase: 0 
         (604 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G37510.1 | Symbols: EMB1467 | EMB1467 (embryo defective 1467)...  1040   0.0  
AT5G37510.2 | Symbols: EMB1467 | EMB1467 (embryo defective 1467)...  1039   0.0  

>AT5G37510.1 | Symbols: EMB1467 | EMB1467 (embryo defective 1467);
           NADH dehydrogenase (ubiquinone)/ NADH dehydrogenase/
           electron carrier/ iron-sulfur cluster binding /
           oxidoreductase/ oxidoreductase, acting on NADH or NADPH
           | chr5:14897490-14900352 FORWARD
          Length = 745

 Score = 1040 bits (2689), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 486/604 (80%), Positives = 546/604 (90%)

Query: 1   MKIKTDTPVAKKAREGVMEFLLMNHPLDCPICDQGGECDLQDQSMAFGSDRGRFTEMKRS 60
           MKIKTDTP+AKKAREGVMEFLLMNHPLDCPICDQGGECDLQDQSMAFGSDRGRFTEMKRS
Sbjct: 142 MKIKTDTPIAKKAREGVMEFLLMNHPLDCPICDQGGECDLQDQSMAFGSDRGRFTEMKRS 201

Query: 61  VVDKNLGPLVKTVMTRCIQCTRCVRFATEIAGVQDLGMLGRGSGEEIGTYVEKLMTSELS 120
           VVDKNLGPLVKTVMTRCIQCTRCVRFA+E+AGVQDLG+LGRGSGEEIGTYVEKLMTSELS
Sbjct: 202 VVDKNLGPLVKTVMTRCIQCTRCVRFASEVAGVQDLGILGRGSGEEIGTYVEKLMTSELS 261

Query: 121 GNVIDICPVGALTSKPFAFKARNWELKGTESIDVSDAVGSNIRIDSRGPEVMRIIPRLNE 180
           GNVIDICPVGALTSKPFAFKARNWELK TE+IDVSDAVGSNIR+DSRGPEVMRIIPRLNE
Sbjct: 262 GNVIDICPVGALTSKPFAFKARNWELKATETIDVSDAVGSNIRVDSRGPEVMRIIPRLNE 321

Query: 181 DINEEWISDKTRFCYDGLKRQRLNDPMIRGTDGRFKAVSWRDALAVVAEVIHQVKPEEIV 240
           DINEEWISDKTRFCYDGLKRQRL+DPMIR +DGRFKAVSWRDALAVV ++IHQVKP+EIV
Sbjct: 322 DINEEWISDKTRFCYDGLKRQRLSDPMIRDSDGRFKAVSWRDALAVVGDIIHQVKPDEIV 381

Query: 241 GVAGKLSDAESMMALKDFLNKMGSNNVWCEGNGPNPNADLRSGYIMNSSISGLEKADVFL 300
           GVAG+LSDAESMM LKDF+N+MGS+NVWCEG     +ADLR  Y+MN+SISGLE AD+FL
Sbjct: 382 GVAGQLSDAESMMVLKDFVNRMGSDNVWCEGTAAGVDADLRYSYLMNTSISGLENADLFL 441

Query: 301 LVGTQPRVEAAMVNARIRKTVRATNAKVGYIGPPSDFNYDCEHLGTGPQTLLEIAEGRHP 360
           L+GTQPRVEAAMVNARI KTVRA+NAKVGY+GPP++FNYDC+HLGTGP TL EIAEGRHP
Sbjct: 442 LIGTQPRVEAAMVNARICKTVRASNAKVGYVGPPAEFNYDCKHLGTGPDTLKEIAEGRHP 501

Query: 361 FYSKILNAKNPAIIVGAGIFERSDKDAIFSTVDAIAKKANVVRPDWNGFNVXXXXXXXXX 420
           F + + NAKNPAIIVGAG+F R+DK+AI S+V++IA+  NVVRPDWNG N          
Sbjct: 502 FCTALKNAKNPAIIVGAGLFNRTDKNAILSSVESIAQANNVVRPDWNGLNFLLQYAAQAA 561

Query: 421 XXXXXXVPESSQSIESAKFVYLMGADDVNLDKLPNDAFLVYQGHHGDRGVYRANVILPAA 480
                 + +S++++ESAKFVYLMGADDVN+DK+P DAF+VYQGHHGD+ VYRANVILPA+
Sbjct: 562 ALDLGLIQQSAKALESAKFVYLMGADDVNVDKIPKDAFVVYQGHHGDKAVYRANVILPAS 621

Query: 481 AFTEKEGTYANTEGCAQQTLPAVPTVGDARDDWKIIRALSEVAGARLPYDSIGAIRSRIR 540
           AFTEKEGTY NTEG  QQT+PAVPTVGDARDDWKI+RALSEV+G +LPY+SI  +RSRI+
Sbjct: 622 AFTEKEGTYENTEGFTQQTVPAVPTVGDARDDWKIVRALSEVSGVKLPYNSIEGVRSRIK 681

Query: 541 NVAPNLLSLDEREPATFWASLKPECTQKISSTPFNASVENFYMTDAITRASKIMAQCSAL 600
           +VAPNL+  DEREPA F  SLKPEC + +S+TPF   VENFYMT++ITRASKIMAQCSA+
Sbjct: 682 SVAPNLVHTDEREPAAFGPSLKPECKEAMSTTPFQTVVENFYMTNSITRASKIMAQCSAV 741

Query: 601 LLKK 604
           LLKK
Sbjct: 742 LLKK 745


>AT5G37510.2 | Symbols: EMB1467 | EMB1467 (embryo defective 1467);
           NADH dehydrogenase (ubiquinone)/ NADH dehydrogenase/
           electron carrier/ iron-sulfur cluster binding /
           oxidoreductase/ oxidoreductase, acting on NADH or NADPH
           | chr5:14897490-14900447 FORWARD
          Length = 748

 Score = 1039 bits (2687), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 486/604 (80%), Positives = 546/604 (90%)

Query: 1   MKIKTDTPVAKKAREGVMEFLLMNHPLDCPICDQGGECDLQDQSMAFGSDRGRFTEMKRS 60
           MKIKTDTP+AKKAREGVMEFLLMNHPLDCPICDQGGECDLQDQSMAFGSDRGRFTEMKRS
Sbjct: 142 MKIKTDTPIAKKAREGVMEFLLMNHPLDCPICDQGGECDLQDQSMAFGSDRGRFTEMKRS 201

Query: 61  VVDKNLGPLVKTVMTRCIQCTRCVRFATEIAGVQDLGMLGRGSGEEIGTYVEKLMTSELS 120
           VVDKNLGPLVKTVMTRCIQCTRCVRFA+E+AGVQDLG+LGRGSGEEIGTYVEKLMTSELS
Sbjct: 202 VVDKNLGPLVKTVMTRCIQCTRCVRFASEVAGVQDLGILGRGSGEEIGTYVEKLMTSELS 261

Query: 121 GNVIDICPVGALTSKPFAFKARNWELKGTESIDVSDAVGSNIRIDSRGPEVMRIIPRLNE 180
           GNVIDICPVGALTSKPFAFKARNWELK TE+IDVSDAVGSNIR+DSRGPEVMRIIPRLNE
Sbjct: 262 GNVIDICPVGALTSKPFAFKARNWELKATETIDVSDAVGSNIRVDSRGPEVMRIIPRLNE 321

Query: 181 DINEEWISDKTRFCYDGLKRQRLNDPMIRGTDGRFKAVSWRDALAVVAEVIHQVKPEEIV 240
           DINEEWISDKTRFCYDGLKRQRL+DPMIR +DGRFKAVSWRDALAVV ++IHQVKP+EIV
Sbjct: 322 DINEEWISDKTRFCYDGLKRQRLSDPMIRDSDGRFKAVSWRDALAVVGDIIHQVKPDEIV 381

Query: 241 GVAGKLSDAESMMALKDFLNKMGSNNVWCEGNGPNPNADLRSGYIMNSSISGLEKADVFL 300
           GVAG+LSDAESMM LKDF+N+MGS+NVWCEG     +ADLR  Y+MN+SISGLE AD+FL
Sbjct: 382 GVAGQLSDAESMMVLKDFVNRMGSDNVWCEGTAAGVDADLRYSYLMNTSISGLENADLFL 441

Query: 301 LVGTQPRVEAAMVNARIRKTVRATNAKVGYIGPPSDFNYDCEHLGTGPQTLLEIAEGRHP 360
           L+GTQPRVEAAMVNARI KTVRA+NAKVGY+GPP++FNYDC+HLGTGP TL EIAEGRHP
Sbjct: 442 LIGTQPRVEAAMVNARICKTVRASNAKVGYVGPPAEFNYDCKHLGTGPDTLKEIAEGRHP 501

Query: 361 FYSKILNAKNPAIIVGAGIFERSDKDAIFSTVDAIAKKANVVRPDWNGFNVXXXXXXXXX 420
           F + + NAKNPAIIVGAG+F R+DK+AI S+V++IA+  NVVRPDWNG N          
Sbjct: 502 FCTALKNAKNPAIIVGAGLFNRTDKNAILSSVESIAQANNVVRPDWNGLNFLLQYAAQAA 561

Query: 421 XXXXXXVPESSQSIESAKFVYLMGADDVNLDKLPNDAFLVYQGHHGDRGVYRANVILPAA 480
                 + +S++++ESAKFVYLMGADDVN+DK+P DAF+VYQGHHGD+ VYRANVILPA+
Sbjct: 562 ALDLGLIQQSAKALESAKFVYLMGADDVNVDKIPKDAFVVYQGHHGDKAVYRANVILPAS 621

Query: 481 AFTEKEGTYANTEGCAQQTLPAVPTVGDARDDWKIIRALSEVAGARLPYDSIGAIRSRIR 540
           AFTEKEGTY NTEG  QQT+PAVPTVGDARDDWKI+RALSEV+G +LPY+SI  +RSRI+
Sbjct: 622 AFTEKEGTYENTEGFTQQTVPAVPTVGDARDDWKIVRALSEVSGVKLPYNSIEGVRSRIK 681

Query: 541 NVAPNLLSLDEREPATFWASLKPECTQKISSTPFNASVENFYMTDAITRASKIMAQCSAL 600
           +VAPNL+  DEREPA F  SLKPEC + +S+TPF   VENFYMT++ITRASKIMAQCSA+
Sbjct: 682 SVAPNLVHTDEREPAAFGPSLKPECKEAMSTTPFQTVVENFYMTNSITRASKIMAQCSAV 741

Query: 601 LLKK 604
           LLKK
Sbjct: 742 LLKK 745