Jatropha Genome Database
- JcCA0307481.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0307481.10 + phase: 0
(345 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G18150.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 104 9e-23
AT2G04230.1 | Symbols: | F-box family protein | chr2:1447025-14... 86 3e-17
AT3G58860.1 | Symbols: | F-box family protein | chr3:21763742-2... 86 5e-17
AT5G02930.1 | Symbols: | F-box family protein | chr5:682577-684... 85 7e-17
AT1G13570.1 | Symbols: | F-box family protein | chr1:4642528-46... 83 2e-16
AT5G02700.1 | Symbols: | F-box family protein | chr5:609381-611... 80 2e-15
AT3G28410.1 | Symbols: | F-box family protein | chr3:10640152-1... 79 4e-15
AT5G02920.1 | Symbols: | ubiquitin-protein ligase | chr5:680541... 78 7e-15
AT3G59200.1 | Symbols: | F-box family protein | chr3:21887484-2... 77 1e-14
AT5G02910.1 | Symbols: | F-box family protein | chr5:677120-678... 77 2e-14
AT5G56420.2 | Symbols: | F-box family protein | chr5:22850863-2... 74 1e-13
AT5G56420.1 | Symbols: | F-box family protein | chr5:22850863-2... 74 1e-13
AT1G55660.1 | Symbols: | F-box family protein | chr1:20800694-2... 74 2e-13
AT3G26922.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 74 2e-13
AT5G38570.1 | Symbols: | F-box family protein | chr5:15449279-1... 74 2e-13
AT4G14096.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 73 3e-13
AT5G38390.1 | Symbols: | F-box family protein | chr5:15366432-1... 72 4e-13
AT3G03360.1 | Symbols: | F-box family protein | chr3:795218-796... 71 8e-13
AT3G44810.1 | Symbols: | F-box family protein | chr3:16358496-1... 71 1e-12
AT3G59160.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 71 1e-12
AT2G42720.1 | Symbols: | F-box family protein | chr2:17785653-1... 70 2e-12
AT4G14103.1 | Symbols: | F-box family protein | chr4:8126948-81... 70 2e-12
AT3G59190.1 | Symbols: | F-box family protein | chr3:21884740-2... 70 2e-12
AT5G41840.1 | Symbols: | F-box family protein | chr5:16754436-1... 70 3e-12
AT3G59230.1 | Symbols: | F-box family protein | chr3:21896052-2... 68 9e-12
AT3G49030.1 | Symbols: | F-box family protein | chr3:18173138-1... 68 1e-11
AT3G59240.1 | Symbols: | F-box family protein | chr3:21898682-2... 67 1e-11
AT4G15060.1 | Symbols: | F-box protein-related | chr4:8599035-8... 67 2e-11
AT3G58880.1 | Symbols: | F-box family protein | chr3:21768485-2... 66 4e-11
AT1G61330.1 | Symbols: | F-box family protein | chr1:22622975-2... 65 5e-11
AT1G58310.1 | Symbols: | F-box family protein | chr1:21631947-2... 65 5e-11
AT3G59000.1 | Symbols: | F-box family protein | chr3:21799757-2... 65 6e-11
AT5G38396.1 | Symbols: | F-box family protein | chr5:15373094-1... 65 6e-11
AT3G52680.2 | Symbols: | F-box family protein | chr3:19527075-1... 65 6e-11
AT3G52680.1 | Symbols: | F-box family protein | chr3:19527075-1... 65 6e-11
AT3G59170.1 | Symbols: | F-box family protein | chr3:21878167-2... 65 8e-11
AT4G00315.1 | Symbols: | F-box family protein | chr4:137404-138... 65 9e-11
AT5G03100.1 | Symbols: | F-box family protein | chr5:726832-727... 65 9e-11
AT4G13960.1 | Symbols: | F-box family protein | chr4:8060681-80... 64 2e-10
AT3G51530.1 | Symbols: | F-box family protein | chr3:19112873-1... 63 2e-10
AT1G55030.1 | Symbols: | F-box family protein | chr1:20530417-2... 63 3e-10
AT1G78760.1 | Symbols: | F-box family protein | chr1:29615174-2... 63 3e-10
AT3G59000.2 | Symbols: | F-box family protein | chr3:21799757-2... 63 3e-10
AT3G58920.1 | Symbols: | F-box family protein | chr3:21776293-2... 63 3e-10
AT5G25860.1 | Symbols: | F-box family protein | chr5:9016908-90... 63 3e-10
AT1G66300.1 | Symbols: | F-box family protein | chr1:24716497-2... 63 3e-10
AT4G00320.1 | Symbols: | F-box family protein | chr4:139939-141... 62 6e-10
AT1G66310.1 | Symbols: | F-box family protein | chr1:24722971-2... 61 9e-10
AT2G26030.3 | Symbols: | F-box family protein | chr2:11091505-1... 61 1e-09
AT2G26030.1 | Symbols: | F-box family protein | chr2:11091505-1... 61 1e-09
AT1G66320.1 | Symbols: | F-box family protein | chr1:24727041-2... 61 1e-09
AT5G56370.2 | Symbols: | F-box family protein | chr5:22836200-2... 60 2e-09
AT5G56370.1 | Symbols: | F-box family protein | chr5:22836200-2... 60 2e-09
AT5G56690.1 | Symbols: | F-box family protein | chr5:22939723-2... 60 2e-09
AT2G42730.1 | Symbols: | F-box family protein | chr2:17787454-1... 60 2e-09
AT4G26340.1 | Symbols: | F-box family protein | chr4:13324130-1... 60 2e-09
AT1G52650.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 60 2e-09
AT4G03220.1 | Symbols: | F-box family protein | chr4:1417472-14... 60 2e-09
AT1G56610.1 | Symbols: | syntaxin-related family protein | chr1... 59 6e-09
AT1G56610.2 | Symbols: | syntaxin-related family protein | chr1... 59 7e-09
AT5G35995.2 | Symbols: | F-box family protein | chr5:14136707-1... 58 7e-09
AT5G35995.1 | Symbols: | F-box family protein | chr5:14136707-1... 58 7e-09
AT5G44950.1 | Symbols: | F-box family protein | chr5:18151665-1... 58 7e-09
AT5G38590.2 | Symbols: | F-box family protein | chr5:15452066-1... 58 1e-08
AT3G56780.1 | Symbols: | F-box family protein | chr3:21031613-2... 57 1e-08
AT5G60610.1 | Symbols: | F-box family protein | chr5:24364049-2... 57 1e-08
AT1G49610.1 | Symbols: | F-box family protein | chr1:18361679-1... 57 1e-08
AT3G44060.1 | Symbols: | F-box family protein | chr3:15824938-1... 57 1e-08
AT5G38590.1 | Symbols: | F-box family protein | chr5:15452586-1... 57 2e-08
AT3G42770.1 | Symbols: | F-box family protein | chr3:14867122-1... 56 3e-08
AT5G56440.1 | Symbols: | F-box family protein | chr5:22855742-2... 56 3e-08
AT1G06630.2 | Symbols: | FUNCTIONS IN: molecular_function unkno... 55 5e-08
AT5G22670.1 | Symbols: | F-box family protein | chr5:7538192-75... 55 5e-08
AT1G06630.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 55 5e-08
AT3G03040.1 | Symbols: | F-box family protein | chr3:684685-686... 55 6e-08
AT1G16930.1 | Symbols: | F-box family protein | chr1:5789987-57... 55 7e-08
AT5G56400.1 | Symbols: | F-box family protein | chr5:22846069-2... 55 7e-08
AT1G06630.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 55 7e-08
AT4G10400.2 | Symbols: | F-box family protein | chr4:6446335-64... 55 7e-08
AT4G10400.1 | Symbols: | F-box family protein | chr4:6446335-64... 55 7e-08
AT3G58900.2 | Symbols: | F-box family protein | chr3:21773030-2... 55 8e-08
AT3G58900.1 | Symbols: | F-box family protein | chr3:21773030-2... 55 8e-08
AT3G58900.3 | Symbols: | F-box family protein | chr3:21773030-2... 55 9e-08
AT5G38386.1 | Symbols: | F-box family protein | chr5:15363178-1... 55 9e-08
AT1G51370.1 | Symbols: | F-box family protein | chr1:19045615-1... 54 1e-07
AT5G62970.1 | Symbols: | F-box family protein | chr5:25272033-2... 54 1e-07
AT4G00160.1 | Symbols: | F-box family protein | chr4:63465-6536... 54 1e-07
AT2G29910.2 | Symbols: | F-box family protein | chr2:12751823-1... 54 1e-07
AT1G51370.2 | Symbols: | F-box family protein | chr1:19045615-1... 54 2e-07
AT1G16940.1 | Symbols: | F-box family protein | chr1:5791983-57... 54 2e-07
AT3G58930.1 | Symbols: | F-box family protein | chr3:21778381-2... 54 2e-07
AT2G29910.1 | Symbols: | F-box family protein | chr2:12751686-1... 53 3e-07
AT4G09920.1 | Symbols: | F-box family protein | chr4:6224691-62... 53 3e-07
AT4G22280.2 | Symbols: | F-box family protein | chr4:11776368-1... 52 4e-07
AT4G22280.1 | Symbols: | F-box family protein | chr4:11776054-1... 52 5e-07
AT5G22610.1 | Symbols: | F-box family protein | chr5:7515217-75... 52 6e-07
AT4G26350.1 | Symbols: | F-box family protein | chr4:13326853-1... 52 6e-07
AT3G59210.1 | Symbols: | F-box family protein | chr3:21889942-2... 52 7e-07
AT3G26930.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 52 8e-07
AT3G58940.1 | Symbols: | F-box family protein | chr3:21781002-2... 52 8e-07
AT3G58950.1 | Symbols: | F-box family protein | chr3:21784116-2... 51 1e-06
AT1G64540.1 | Symbols: | F-box family protein | chr1:23966909-2... 51 1e-06
AT5G27750.1 | Symbols: | F-box family protein | chr5:9828430-98... 50 2e-06
AT2G26860.1 | Symbols: | F-box family protein | chr2:11452196-1... 50 2e-06
AT2G26860.2 | Symbols: | F-box family protein | chr2:11452421-1... 50 2e-06
AT1G67390.1 | Symbols: | F-box family protein | chr1:25244690-2... 50 3e-06
AT1G21990.1 | Symbols: | F-box family protein | chr1:7740530-77... 49 4e-06
AT1G32375.1 | Symbols: | F-box family protein | chr1:11679230-1... 49 4e-06
AT1G56400.1 | Symbols: | F-box family protein | chr1:21111805-2... 49 5e-06
AT5G56410.1 | Symbols: | F-box family protein | chr5:22848508-2... 49 6e-06
AT2G29930.3 | Symbols: | F-box family protein | chr2:12756457-1... 48 7e-06
AT2G29930.1 | Symbols: | F-box family protein | chr2:12756457-1... 48 7e-06
AT5G38565.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 48 7e-06
AT1G48400.1 | Symbols: | F-box family protein | chr1:17882136-1... 48 8e-06
AT5G40050.1 | Symbols: | F-box family protein | chr5:16032083-1... 48 9e-06
>AT3G18150.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s:
Cyclin-like F-box (InterPro:IPR001810), Leucine-rich
repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana
protein match is: F-box family protein
(TAIR:AT5G02910.1). | chr3:6217929-6219500 FORWARD
Length = 456
Score = 104 bits (259), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 135/257 (52%), Gaps = 39/257 (15%)
Query: 12 AVDHSLNDLPEEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLSSLNFPYSSVSTATSIP 71
AVD S++ LP+ IL HILSF+ TK AI TSLL ++WR++WC SL+F
Sbjct: 29 AVD-SISSLPDVILQHILSFIPTKLAITTSLLSKRWRHVWCDTPSLSFN----------D 77
Query: 72 ARSLADFINQTLIRRPSTSPPLQKFHLQFDFKEHLYSSHVDSWVRYAILHHVQQLELDFY 131
R A FI++TL R T+ + +FHL ++ H++SW+++A+ +V L LD +
Sbjct: 78 YRLEAPFIDETLTRY--TASKMMRFHLHTSLINNV--PHLESWIKFAMSRNVDHLSLDLW 133
Query: 132 ISREFQTSDIESDYDFPFFLLKNGNVKILKLTKCRITLPTNVASMGLSF-LKSVFLDQVY 190
+ + + + FP F N ++K ++T+ + + ++ LK ++L
Sbjct: 134 -------NQVANKFKFPDFFHINSSLK-------QLTVVLDFSDTMIAICLKKLYLSTCL 179
Query: 191 LSDEMVSNLISGCVNLVFLGLEYCYGMKDVKIC-SLKITVLHLNYFTCEDGSLEISCPNL 249
LSDE ++N++ GC L L L++C G++ + + SL++ L +N I P L
Sbjct: 180 LSDESMANILFGCPILESLTLDHCGGLRVLDLSKSLRLRTLEIN--------CNIWVPEL 231
Query: 250 VSLEMIGFHVEKYDFKN 266
+++++ H +N
Sbjct: 232 TAMQIVAPHTHCLRLRN 248
>AT2G04230.1 | Symbols: | F-box family protein |
chr2:1447025-1448678 REVERSE
Length = 448
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 92/320 (28%), Positives = 143/320 (44%), Gaps = 53/320 (16%)
Query: 11 SAVDHSLNDLPEEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLSSLNFP--YSSVSTAT 68
S + ++DLP+ +L ILS L T++AI TS+L ++WR LW L L F ++ V
Sbjct: 9 SMNEDRISDLPDALLLQILSSLPTENAIATSVLSKRWRSLWTMLPKLKFDSNFNPVFDDD 68
Query: 69 SIPARSLADFINQTLIRRPSTSPPLQKFHLQFDFKEHLYSSHVDSWVRYAILHHVQQLEL 128
+I ++ + +TL +P L+ HL F+ + HV W+ A V++L L
Sbjct: 69 NIDPTMFSENVYKTLSLH--KAPVLESLHLSFEGRTDCL--HVGIWIATAFARGVRKLVL 124
Query: 129 D-FYISREFQTSDIESDYDFPFFLLKNGNVKILKLTKCRITL--PTNVASMGLSFLKSVF 185
D FY +E QT + S N +++ILKL KC I L P+ V L L+ ++
Sbjct: 125 DSFY--QEDQTVTLPS-----VLFSYNDSLEILKL-KCAIDLDFPSRVC---LKSLRKLY 173
Query: 186 LDQVYLSD-EMVSNLISGCVNLVFLGLEYCYGMKDVKICSLKITVLHLNYFTCED----- 239
LDQV+ D E V NL+ GC +L L + + + + I L T ED
Sbjct: 174 LDQVHFKDEESVCNLLCGCPSLQDL---VVHRYSNADVATFTIASPSLQRLTIEDLRQEG 230
Query: 240 ----GSLEISCPNLVSLEMIG------------FHVEKYDFKNLSGLVEAGVAFLHMWKY 283
GS I+ P L L + G +E+ N+SG+ +
Sbjct: 231 GYGNGSYVINAPGLKYLNINGVIDIESCLIDKALELEEAKISNVSGITNENI-------- 282
Query: 284 YRHWSQVMRFLLHVKRLTVQ 303
+ R +LH+ L V+
Sbjct: 283 LESLTSAKRLILHLSPLEVK 302
>AT3G58860.1 | Symbols: | F-box family protein |
chr3:21763742-21765306 REVERSE
Length = 457
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 122/269 (45%), Gaps = 33/269 (12%)
Query: 20 LPEEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLSSLNF-------PYSSVSTATSIPA 72
LP+E+++HILS L TK A TS+L +KWRYL+ + SL+F P I
Sbjct: 12 LPDEVISHILSSLPTKEAASTSVLAKKWRYLFAFVPSLDFNDSDFLHPQEGKREKDGI-L 70
Query: 73 RSLADFINQTLIRRPSTSPPLQKFHLQFDFKEHLYSSHVDSWVRYAILHHVQQLELDFYI 132
RS DF+++ L + ++ P++KF L + K + VD W+ + V L L
Sbjct: 71 RSFMDFVDRVLALQGAS--PIKKFSL--NVKTGVDPDRVDRWICNVLQRGVSHLALFM-- 124
Query: 133 SREFQTSDIESDYDFPFFLLKNGNVKILKLTKCRITLPTNVASMGLSFLKSVFLDQVYLS 192
D E +Y P+ + + + LK T + L M L LK++ L+ V
Sbjct: 125 -------DFEEEYSLPYEISVSKTLVELK-TGYGVDLYLWDDDMFLPMLKTLVLESVEFG 176
Query: 193 DEMVSNLISGCV---NLVFLGLEYCYGMKDVKICSLKITVLHLNYFTCED---GSLEISC 246
L+ C L+ L +E+ KD + ++ +L T ED G+L
Sbjct: 177 RGQFQTLLPACPVLEELMLLNMEW----KDRNVILSSSSLKNLK-ITSEDGCLGTLSFDT 231
Query: 247 PNLVSLEMIGFHVEKYDFKNLSGLVEAGV 275
PNLV L+ + E Y NL LVE G+
Sbjct: 232 PNLVFLDYYDYVAEDYPIVNLKNLVEVGI 260
>AT5G02930.1 | Symbols: | F-box family protein | chr5:682577-684480
FORWARD
Length = 469
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 131/264 (49%), Gaps = 28/264 (10%)
Query: 16 SLNDLPEEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLSSLNFPYSSVSTATSIPARSL 75
S++DLP+ +L HI S++ T+ AI+TS+L ++WR++W + L+F + VS
Sbjct: 29 SISDLPDAVLQHIFSYIPTELAIRTSVLSKRWRHVWSETPHLSFEWLKVS---------- 78
Query: 76 ADFINQTLIRRPSTSPPLQKFHLQFDFKEHLYSSHVDSWVRYAILHHVQQLELDFYISRE 135
IN+TL T+ ++ FHL + + HV+S + +A+ H+V L L F
Sbjct: 79 PKLINKTLASY--TASKIKSFHLCTRYSYEADTHHVNSSIEFAMSHNVDDLSLAFRRCSP 136
Query: 136 FQTSDIESDYDFPFFLLKNGNVKILKLTKCRITLPTNVASMGLSFLKSVFLDQVYLSDEM 195
F Y+F N ++K ++L + +P + S + LK++ L +SDE
Sbjct: 137 F--------YNFDDCFYTNSSLKRVELRYVDL-MPRCMVSW--TSLKNLSLTDCTMSDES 185
Query: 196 VSNLISGCVNLVFLGLEYCYGMKDVKIC-SLKITVLH---LNYFTCEDGSLEISCPNLVS 251
++SGC L L L++C +K + + SL++T L ++Y S++I P +
Sbjct: 186 FLEILSGCPILESLSLKFCMSLKYLNLSKSLRLTRLEIERISYIRAPMLSMQIVAPYIHY 245
Query: 252 LEMIGFHVEKYDFKNLSGLVEAGV 275
L + F ++S L EA V
Sbjct: 246 LRLRDSEAH-CTFVDVSSLTEANV 268
>AT1G13570.1 | Symbols: | F-box family protein |
chr1:4642528-4643930 REVERSE
Length = 416
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 97/199 (48%), Gaps = 19/199 (9%)
Query: 17 LNDLPEEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLSSLNFPYSSVSTATS--IPARS 74
++DLP+ I+ +IL+ LS + AI+TS+L KWRY W L+ L F VS + + +
Sbjct: 8 ISDLPQSIIENILTRLSIRDAIRTSVLSSKWRYKWSTLTDLVFDEKCVSPSNDRCVVETN 67
Query: 75 LADFINQTLIRRPSTSPPLQKFHLQFDFKEHLYSSHVDSWVRYAILHHVQQLELDFYISR 134
L FI L+ P+ KF L FK+ +D W+ + + +++L L
Sbjct: 68 LVRFITGVLLLHQG---PIHKFQLSTSFKQ--CRPDIDQWLLFLSRNGIKELVLKLG--- 119
Query: 135 EFQTSDIESDYDFPFFLLKNGNVKILKLTKCRITLPTNVASMGLSFLKSVFLDQVYLSDE 194
E ++ P L + L+L C P G S+LKS+ L Q+ ++ E
Sbjct: 120 -------EGEFRVPACLFNCLKLTCLELCHCEFDPPQYFK--GFSYLKSLNLHQILVAPE 170
Query: 195 MVSNLISGCVNLVFLGLEY 213
++ +LISGC L FL L Y
Sbjct: 171 VIESLISGCPLLEFLSLSY 189
>AT5G02700.1 | Symbols: | F-box family protein | chr5:609381-611679
REVERSE
Length = 456
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 143/305 (46%), Gaps = 40/305 (13%)
Query: 17 LNDLPEEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLSSLNFPYSSVSTATSIPARSLA 76
+N +P++IL HILSF+ T A++TS+L R+WR++WC+ L+ +
Sbjct: 29 INYMPDDILHHILSFIPTDLAMRTSVLSRRWRHVWCETPCLDITLKHGA----------- 77
Query: 77 DFINQTLIRRPSTSPPLQKFHLQFDFKEHLYSSHVDSWVRYAILHHVQQLEL---DFYIS 133
+NQTL T+P + F L D + VDSW+ +A+ +VQ L + DF S
Sbjct: 78 --MNQTLTSY--TAPIITSFKLVMDLNSNTV-PQVDSWIEFALSRNVQNLSVFVRDFTYS 132
Query: 134 REFQTSDIESDYDFPFFLLKNGNVKILKLT-KCRITLPTNVASMGLSFLKSVFLDQVYLS 192
+ ++ DI F+L + ++K+L +T +PT ++ L+++ L +
Sbjct: 133 KTYRFPDI-------FYL--SSSLKLLDVTLDFFDMIPT--CTVSWKSLRNLTLRFCQIP 181
Query: 193 DEMVSNLISGCVNLVFLGLEYCYGMKDVKIC-SLKITVLHLNYFTCEDGSLEISCPNLVS 251
DE + N++SGC L L L+ C ++ + + S + L +N G + I P++
Sbjct: 182 DESIHNILSGCPILESLTLDTCRLLERLDLSKSPNLRRLDINQQYRRTGPVAIVAPHIYY 241
Query: 252 LEMIGFHVEKYDFKNLSGLVEAGVAF-------LHMWKYYRHWSQVMRFLLHVKRLTVQN 304
L + + ++S L EA + L Y +++ +VKRLTV
Sbjct: 242 LRLT-YSSTPSTIVDVSSLSEANLTIISSLLSPLTADGYQTMALEMLSKFHNVKRLTVGE 300
Query: 305 WWFKV 309
++
Sbjct: 301 TLLQI 305
>AT3G28410.1 | Symbols: | F-box family protein |
chr3:10640152-10642071 REVERSE
Length = 465
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 137/296 (46%), Gaps = 35/296 (11%)
Query: 17 LNDLPEEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLSSLNFPYSSVSTATSIPARSLA 76
+N +P++IL HILSF+ T A++TS+L R+WR++WC+ L+ T
Sbjct: 30 INYMPDDILHHILSFIPTDLAMRTSVLSRRWRHVWCETPCLDIKLKHGET---------- 79
Query: 77 DFINQTLIRRPSTSPPLQKFHLQFDFKEHLYSSHVDSWVRYAILHHVQQLELDFYISREF 136
NQTL T+P + F L D ++ VDSW+ +A+ +VQ L + R+F
Sbjct: 80 ---NQTLTS--YTAPIITSFKLVMDLNDNTV-PQVDSWIEFALSRNVQNLSV---FVRDF 130
Query: 137 QTSDIESDYDFPFFLLKNGNVKILKLT-KCRITLPTNVASMGLSFLKSVFLDQVYLSDEM 195
+ Y FP + ++K L +T +PT ++ L+++ L + DE
Sbjct: 131 TYTKT---YRFPDIFYISSSLKQLDVTLDFFDMIPT--CAVSWKSLRNLTLRFCQIPDES 185
Query: 196 VSNLISGCVNLVFLGLEYCYGMKDVKIC-SLKITVLHLNYFTCEDGSLEISCPNLVSLEM 254
+ N++SGC L L L+ C ++ + + S + L +N G + I P++ L +
Sbjct: 186 MHNILSGCPILESLTLDTCRLLERLDLSKSPNLRRLDINRQYRRTGPIAIVAPHIYYLRL 245
Query: 255 IGFHVEKYDFKNLSGLVEAGVAF--------LHMWKYYRHWSQVMRFLLHVKRLTV 302
+ ++S L EA + L +Y +++ +VKRLTV
Sbjct: 246 T-YSSTPSTIVDVSSLSEANLNIISDRLLSPLTADRYQTMALEMLSKFHNVKRLTV 300
>AT5G02920.1 | Symbols: | ubiquitin-protein ligase |
chr5:680541-681317 FORWARD
Length = 258
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 114/224 (50%), Gaps = 27/224 (12%)
Query: 16 SLNDLPEEILTHILSFL-STKSAIQTSLLCRKWRYLWCQLSSLNFPYSSVSTATSIPARS 74
S+++LP+EIL HILSF+ T I+TS+L ++WR++W + L+F + VS
Sbjct: 29 SISNLPDEILHHILSFIPETNLVIRTSVLSKRWRHVWSKTPHLSFEWLMVS--------- 79
Query: 75 LADFINQTLIRRPSTSPPLQKFHLQFDFKEHLYSSHVDSWVRYAILHHVQQLELDFYISR 134
IN+TL T+ + FHL + + HV S + +A+ H+V L L F
Sbjct: 80 -PKLINKTLASY--TASKITSFHLCTSYS--YEAGHVHSSIEFAMSHNVDNLSLAF---- 130
Query: 135 EFQTSDIESDYDFPFFLLKNGNVKILKLTKCRITLPTNVASMGLSFLKSVFLDQVYLSDE 194
S FP F + ++K ++L +T P+ + S + L+ + L + LSD+
Sbjct: 131 ----SSFPPCNKFPDFFYTSSSLKRVELRSASLT-PSCIVSW--TSLRDLSLTRCNLSDK 183
Query: 195 MVSNLISGCVNLVFLGLEYCYGMKDVKIC-SLKITVLHLNYFTC 237
++SGC L L L++C +K + + SL++T L + +C
Sbjct: 184 SFLKILSGCPILESLSLKFCESLKYLDLSKSLRLTRLEIERRSC 227
>AT3G59200.1 | Symbols: | F-box family protein |
chr3:21887484-21889214 FORWARD
Length = 520
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 127/274 (46%), Gaps = 30/274 (10%)
Query: 17 LNDLPEEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLSSLNFPYSSVSTATSIP----A 72
++ LP +++HILSFL TK A TS+L +KWRYL+ +++L+F S +
Sbjct: 9 ISSLPNPVVSHILSFLPTKEAASTSVLSKKWRYLFAYVTNLDFDDSDYQDGKPKSDVELS 68
Query: 73 RSLADFINQTLIRRPSTSPPLQKFHLQ-FDFKEHLYSSHVDSWVRYAILHHVQQLELDFY 131
RS +F+++ L + + S + KF L+ ++ L + V W+ + V +L+L
Sbjct: 69 RSFMEFVDRVLALQGNGS--VNKFSLECSNYDVDL--ARVTGWILNVLGRGVSELDLSIL 124
Query: 132 ISREFQTSDIESDYDFPFFLLKNGNVKILKLTKCR-ITLPTNVASMGLSFLKSVFLDQVY 190
+Y P + + + LKL +TL + + L LK++++D V
Sbjct: 125 ------------EYPLPSEIFVSKTLVRLKLGPANDLTLTLDRKDVFLPKLKTLYIDCVD 172
Query: 191 LSDEMVS--NLISGCVNLVFLGLEYCYGMKDVKICSLKITVLHLNYFTCED-----GSLE 243
+ + L+SGC L L L G ++ K CS+ + L F CE+ S+
Sbjct: 173 VQERGFGFVKLLSGCPVLEELVL-MNIGWENWKFCSVSVKTLKRLTFFCEETYENPKSVS 231
Query: 244 ISCPNLVSLEMIGFHVEKYDFKNLSGLVEAGVAF 277
PNLV LE KY N + LVEA +
Sbjct: 232 FDTPNLVYLEYSDAIASKYPKVNFNSLVEAHIGL 265
>AT5G02910.1 | Symbols: | F-box family protein | chr5:677120-678907
FORWARD
Length = 458
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 103/198 (52%), Gaps = 22/198 (11%)
Query: 17 LNDLPEEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLSSLNFPYSSVSTATSIPARSLA 76
++ LP+EIL HILS + TKSAI+TSLL ++WRY+W + SL+ R+
Sbjct: 13 ISSLPDEILHHILSSVPTKSAIRTSLLSKRWRYVWSETPSLSIDCR----------RADP 62
Query: 77 DFINQTLIRRPSTSPPLQKFHLQFDFKEHLYSSHVDSWVRYAILHHVQQLELDFYISREF 136
+ I++TL ++P + FHL + S V+ + +AI H+ ++L L+ SR++
Sbjct: 63 NSIDKTL--SFFSAPKITSFHLHTTLLNRIDS--VNGCIEFAISHNAEKLSLE---SRDY 115
Query: 137 QTSDIESDYDFPFFLLKNGNVKILKLTKCRITLPTNVASMGLSFLKSVFLDQVYLSDEMV 196
+ +Y FP F N +VK L + + L ++ + LK++ L LSDE
Sbjct: 116 RV----RNYKFPDFFYTNSSVKQLFVDSGSVHLIPR-CTVSWTSLKNLSLSNCTLSDESF 170
Query: 197 SNLISGCVNLVFLGLEYC 214
++SG L L L YC
Sbjct: 171 LKILSGSPLLESLELLYC 188
>AT5G56420.2 | Symbols: | F-box family protein |
chr5:22850863-22852334 REVERSE
Length = 422
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 133/294 (45%), Gaps = 30/294 (10%)
Query: 17 LNDLPEEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLSSLNFPYSSVSTATSIPARSLA 76
L+ LP++ L ILS+L TK + TSLL ++WR+LW + LN Y + P +
Sbjct: 8 LSQLPDDFLLQILSWLPTKDVLVTSLLSKRWRFLWTLVPRLN--YDLRLHDNTCP--RFS 63
Query: 77 DFINQTLIRRPSTSPPLQKFHLQFDFKEHLYSSHVDSWVRYAILHHVQQLELDFYISREF 136
F++++L+ +P L+ +++ V WVR + V++L + +
Sbjct: 64 QFVDRSLLLH--KAPTLESLNIKIGSICFTAEKDVGVWVRIGVDRFVRELSVSYCSG--- 118
Query: 137 QTSDIESDYDFPFFLLKNGNVKILKLTKCRITLPTNVASMGLSFLKSV-FLDQVYLSDEM 195
E P L + +LKL ITL + LK++ LD YL D+
Sbjct: 119 -----EEPIRLPKCLFTCSTLAVLKLEN--ITLEDASCYVCFQSLKTLHLLDVKYLDDQS 171
Query: 196 VSNLISGCVNLVFLGLEYCYGMKDVKIC-----SLKITVLHLN--YFTCEDGSLEISCPN 248
+ +IS C +L L ++ C G +VK+ SLK LH + F +D I P
Sbjct: 172 LPRIISSCSSLEDLVVQRCPG-DNVKVVTVTAPSLKTLSLHKSSQAFEGDDDGFLIDTPK 230
Query: 249 LVSLEMIGFHVEKYDFKNLSGLVEAGVAFLHMWKYYRHWSQVMRFLLHVKRLTV 302
L +++ + +N+ +VEA V + Y++ +++ + VKRL +
Sbjct: 231 LKRVDIEDYWGGFCYIENMPEVVEANVDVI-----YKNTEKLLGSITSVKRLAL 279
>AT5G56420.1 | Symbols: | F-box family protein |
chr5:22850863-22852334 REVERSE
Length = 422
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 133/294 (45%), Gaps = 30/294 (10%)
Query: 17 LNDLPEEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLSSLNFPYSSVSTATSIPARSLA 76
L+ LP++ L ILS+L TK + TSLL ++WR+LW + LN Y + P +
Sbjct: 8 LSQLPDDFLLQILSWLPTKDVLVTSLLSKRWRFLWTLVPRLN--YDLRLHDNTCP--RFS 63
Query: 77 DFINQTLIRRPSTSPPLQKFHLQFDFKEHLYSSHVDSWVRYAILHHVQQLELDFYISREF 136
F++++L+ +P L+ +++ V WVR + V++L + +
Sbjct: 64 QFVDRSLLLH--KAPTLESLNIKIGSICFTAEKDVGVWVRIGVDRFVRELSVSYCSG--- 118
Query: 137 QTSDIESDYDFPFFLLKNGNVKILKLTKCRITLPTNVASMGLSFLKSV-FLDQVYLSDEM 195
E P L + +LKL ITL + LK++ LD YL D+
Sbjct: 119 -----EEPIRLPKCLFTCSTLAVLKLEN--ITLEDASCYVCFQSLKTLHLLDVKYLDDQS 171
Query: 196 VSNLISGCVNLVFLGLEYCYGMKDVKIC-----SLKITVLHLN--YFTCEDGSLEISCPN 248
+ +IS C +L L ++ C G +VK+ SLK LH + F +D I P
Sbjct: 172 LPRIISSCSSLEDLVVQRCPG-DNVKVVTVTAPSLKTLSLHKSSQAFEGDDDGFLIDTPK 230
Query: 249 LVSLEMIGFHVEKYDFKNLSGLVEAGVAFLHMWKYYRHWSQVMRFLLHVKRLTV 302
L +++ + +N+ +VEA V + Y++ +++ + VKRL +
Sbjct: 231 LKRVDIEDYWGGFCYIENMPEVVEANVDVI-----YKNTEKLLGSITSVKRLAL 279
>AT1G55660.1 | Symbols: | F-box family protein |
chr1:20800694-20802340 FORWARD
Length = 492
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 91/318 (28%), Positives = 149/318 (46%), Gaps = 46/318 (14%)
Query: 5 NAATVFSAVDHSLNDLPEEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLSSL--NFPYS 62
N V + +D ++ LP+E+L +LSFLSTK A+ TS+L +W+ LW L L NF +
Sbjct: 44 NVEIVKNLMDK-ISQLPDELLVKVLSFLSTKDAVSTSILSMRWKSLWMWLPKLEYNFRHY 102
Query: 63 SVSTATSIPARSLADFINQTLIRRPSTSPPLQKFHLQFDFKE--HLYSSHVDSWVRYAI- 119
SVS + LA FI +L R +P ++ L+F + + + WV A+
Sbjct: 103 SVSE-----GQGLARFITSSL--RVHKAPAIESLSLKFRYGAIGSIKPKDIYLWVSLAVH 155
Query: 120 LHHVQQLELDFYISREFQTSDIESDYDFPFFLLKNGNVKILKLT-KCRITLPTNVASMGL 178
+ +V++L L + E T P L K ++ ILKL + + +P V L
Sbjct: 156 VSNVRELSLKLFNFAELPTK-------LPKSLCKCKSIVILKLKDEILVDVPRKVC---L 205
Query: 179 SFLKSVFLDQVYLSD-EMVSNLISGCVNLVFLGLEY----CYGMKDVKICSLKITVLHLN 233
LK++FL +V SD + L+S C L L +E G V + SL+ L ++
Sbjct: 206 PSLKTLFLGRVTYSDANSLHRLLSNCPVLEDLVMERDKIDNLGKLSVIVKSLQRLTLKMS 265
Query: 234 YFTCEDGSLEISCPNLVSLEMIGFHVEK--------------YDFKNLSGLVEAG--VAF 277
C L+++ P+L L++I +E YDF+++ L EA + F
Sbjct: 266 R-PCHLDGLKMNSPSLKYLKVIDERLESDSDDESDSDSPRYFYDFEDMPKLEEADFVLTF 324
Query: 278 LHMWKYYRHWSQVMRFLL 295
++ K++ + V R L
Sbjct: 325 QNIKKFFGSITSVKRLSL 342
>AT3G26922.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s:
Cyclin-like F-box (InterPro:IPR001810), Leucine-rich
repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana
protein match is: F-box family protein
(TAIR:AT3G52680.2). | chr3:9922858-9923891 FORWARD
Length = 306
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 141/297 (47%), Gaps = 31/297 (10%)
Query: 14 DHSLNDLPEEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLSSLNFPYSSVSTATSIPAR 73
+ ++DLPE +L ILS L K + TS+L + WR LW + +L F Y + +
Sbjct: 13 EDRISDLPEALLLQILSMLPVKDVVTTSVLSKPWRSLWKLVPTLKFDYENNQSED----E 68
Query: 74 SLADFINQTLIRRPSTSPPLQKFHLQFDFKEHLYSSHVDSWVRYAILHHVQQLELDFYIS 133
+ ++ + + L+ + +P L+ HL F F E S V W+ A HV+ L L
Sbjct: 69 TYSEIVCRLLLS--NKAPFLESLHLGFRFGE-CRSVEVGMWIGIAYARHVRDLVL----- 120
Query: 134 REFQTSDIESDYDFPFFLLKNGNVKILKLTKCRITLPTNVASMG-LSFLKSVFLDQV-YL 191
++ + FP L N + L+ R + +V S L L+++ L+ V Y
Sbjct: 121 ---HVESVKGSFIFPTGLY---NCETLESLTLRSWVLVDVPSPACLKSLRTLRLENVDYK 174
Query: 192 SDEMVSNLISGCVNLVFLGLEYCYGMKDVKICSLKITVLH-LNYFTCEDG----SLEISC 246
D+ V NL+SGC NL L + Y + +V+ ++ + L L + DG I+
Sbjct: 175 YDDSVYNLLSGCPNLENL-VVYRGNLLEVETFTIAVPSLQRLTIYDDNDGEYCTGYVINA 233
Query: 247 PNLVSLEMIGFH-VEKYDFKNLSGLVEAGVAFLHMWKYYRHWSQVMRFLLHVKRLTV 302
P+L L++ GF +E +N LVEA + +++ K +++ L VKRL++
Sbjct: 234 PSLKYLKIDGFKALESCLIENAPELVEATI--MNVSKIINE--KLLETLTSVKRLSL 286
>AT5G38570.1 | Symbols: | F-box family protein |
chr5:15449279-15450601 REVERSE
Length = 379
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 131/292 (44%), Gaps = 62/292 (21%)
Query: 16 SLNDLPEEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLSSLNFPYSSVSTATSIPARSL 75
++N LP+++L ILSF+ T A+ T +L ++W +LW L +L F VS S P +
Sbjct: 3 NINGLPDDLLVKILSFVPTYVAVSTCVLSKRWEFLWMWLPNLEF----VSPWDSRPG--I 56
Query: 76 ADFINQTL-IRRPSTSPPLQKFHLQFDFKEHLYSSHVDSWVRYAILHHVQQLELDFYISR 134
DFIN+ L I R +P +++ + + H+ ++ W+ A+ H+V++L++D++
Sbjct: 57 VDFINKKLPIHR---APVIERLCIHINSNPHIKPEYIKRWIEIAVSHYVRELQIDYH--- 110
Query: 135 EFQTSDIESDYDFPFFLLKNGNVKILKLTKCRITLPTNVASMGLSFLKSVFLDQVYLSDE 194
+K +ITL +S F+D YL
Sbjct: 111 ----------------------------SKTKITLQLEA--------ESYFIDGKYLQ-- 132
Query: 195 MVSNLISGCVNLVFLGLEYCYGMKDVKICSLKITVLHLNYFTCEDGSL---EISCPNLVS 251
LISGC L L L +C + + ++ L+ F + +L +I P+L
Sbjct: 133 ---QLISGCPVLEDLSLRFCCNDNLREFTVIIPSLQSLSLFLFGNSNLNRYKIDTPSLKY 189
Query: 252 LEMIGFH-VEKYDFKNLSGLVEAGVAFLHMWKYYRHWSQVMRFLLHVKRLTV 302
L++ ++ E Y + N+ L EA V + H ++ + VK LT+
Sbjct: 190 LKLEDWNDPEHYSWTNMPKLREAYVDV----ESSNHLKTLIGSITSVKHLTI 237
>AT4G14096.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s:
Cyclin-like F-box (InterPro:IPR001810), FBD-like
(InterPro:IPR006566), Leucine-rich repeat 2
(InterPro:IPR013101); BEST Arabidopsis thaliana protein
match is: F-box family protein (TAIR:AT4G14103.1); Has
1300 Blast hits to 1271 proteins in 9 species: Archae -
0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1300;
Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
| chr4:8124606-8126202 FORWARD
Length = 468
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 119/266 (44%), Gaps = 26/266 (9%)
Query: 17 LNDLPEEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLSSLNFP---YSSVSTATSIPAR 73
++ LPE I HILSFL TK A TS+L +KWRYL+ + +L+ Y + T + +
Sbjct: 10 ISSLPEAISCHILSFLPTKEAASTSVLSKKWRYLFAFVPNLDLDESVYLNPENETEV-SS 68
Query: 74 SLADFINQTLIRRPSTSPPLQKFHLQFDFKEHLYSSHVDSWVRYAILHHVQQLELDFYIS 133
S DF+++ L + ++ PL KF L+ + + + W+ + V L+L Y+
Sbjct: 69 SFMDFVDRVLALQGNS--PLHKFSLK--IGDGVEPDRIIPWINNVLERGVSDLDLHVYME 124
Query: 134 REFQTSDIESDYDFPFFLLKNGNVKILKLTKCRITLPTNVASMGLSFLKSVFLDQVYLSD 193
EF FP + + + LKL + + L LK++++D Y
Sbjct: 125 TEFV---------FPSEMFLSKTLVRLKLMLYPL---LEFEDVYLPKLKTLYIDSCYFEK 172
Query: 194 EMV--SNLISGCV---NLVFLGLEYC-YGMKDVKICSLKITVLHLNYFTCEDGSLEISCP 247
+ + L+SGC +LV + +C + V + +LK S+ I P
Sbjct: 173 YGIGLTKLLSGCPILEDLVLDDIPWCTWDFASVSVPTLKRLTFSTQVRDEFPKSVSIDTP 232
Query: 248 NLVSLEMIGFHVEKYDFKNLSGLVEA 273
NLV L+ KY N LVEA
Sbjct: 233 NLVYLKFTDTVAGKYPKVNFDSLVEA 258
>AT5G38390.1 | Symbols: | F-box family protein |
chr5:15366432-15368053 FORWARD
Length = 456
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 125/268 (46%), Gaps = 30/268 (11%)
Query: 17 LNDLPEEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLSSLNFPYSSVSTATSIPARSL- 75
L++LP E+L HILSFL+TK A TS+L ++WR L + +++ + R L
Sbjct: 4 LSNLPYELLCHILSFLTTKEAALTSVLSKRWRNLIAFVPNVDIVDHDI--------RELF 55
Query: 76 ADFINQTLIRRPSTSPPLQKFHLQFDFKEHLYSSHVDSWVRYAILHHVQQLELDFYISRE 135
DF+++ L + ++ P+ KF L + S VD W++ ++ V +L L ++
Sbjct: 56 MDFVDRVLALQGNS--PINKFSLDC---SGVDSDRVDCWIQNVMVRGVSELNLSIFVDSV 110
Query: 136 FQTSDIESDYD-FPFFLLKNGNVKILKLTKCRITLPTNVASMGLSFLKSVFLDQVYLSDE 194
F E DY+ FP N K++KL I+ S+ L LK++ L+ V LS E
Sbjct: 111 F-----EDDYNLFPKVF---ENKKLVKLGLSYISWLD--GSIFLPMLKTLVLESVLLSVE 160
Query: 195 MVSNLISGCVNLVFLGLEYCY----GMKDVKICSLKITVLHLNYFTCEDGSLEISCPNLV 250
L+ L L + Y + D+ + S + L +N+ C +L P L
Sbjct: 161 KFEILLHALPALEELVMNNIYWKERDVVDLIVSSESLKTLTINFIVCTH-TLSFDTPILA 219
Query: 251 SLEMIGFHVEKYDFKNLSGLVEAGVAFL 278
L G+ V+ Y + L EA ++ L
Sbjct: 220 YLSYSGYVVDDYAEAKMENLFEARISLL 247
>AT3G03360.1 | Symbols: | F-box family protein | chr3:795218-796918
FORWARD
Length = 481
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 106/211 (50%), Gaps = 32/211 (15%)
Query: 17 LNDLPEEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLSSLNFPYSSVSTATSIPARSLA 76
++ LP++IL ILS+L T+ AI+TS+L R+WR++W SL+F R A
Sbjct: 39 ISRLPDDILQLILSYLPTRLAIKTSVLSRRWRHVWSDTWSLSFHRD----------RPDA 88
Query: 77 DFINQTLIRRPSTSPPLQKFHLQFDFKEHLYS-----SHVDSWVRYAILHHVQQLELDFY 131
IN+ L R +P + F + + S + +DSW+ +A+ +V+ L L Y
Sbjct: 89 PCINRILDR--YRAPKMMSFRICSCCRAACISRPDTHADIDSWINFAMSRNVENLSL--Y 144
Query: 132 ISREFQTSDIESDYDFPFFLLKNGNVKILKLT-KCR---ITLPTNVASMGLSFLKSVFLD 187
+ E YD P FL N ++K L L C+ I+L S+ + LK++ L
Sbjct: 145 LD--------EDKYDIPEFLYINSSLKQLYLDFGCKKDFISLNPK-CSVSWTSLKNLSLY 195
Query: 188 QVYLSDEMVSNLISGCVNLVFLGLEYCYGMK 218
+SDE ++ ++SGC L L L +C +K
Sbjct: 196 HCNISDESIAIILSGCPILESLLLFFCKKLK 226
>AT3G44810.1 | Symbols: | F-box family protein |
chr3:16358496-16359983 REVERSE
Length = 448
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 125/277 (45%), Gaps = 38/277 (13%)
Query: 16 SLNDLPEEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLSSLNFPYSSVS------TATS 69
SLN LP+E+L H+LS L TK A TS+L ++WR L+ +L+F S +S
Sbjct: 8 SLNCLPDELLVHVLSSLETKQAASTSVLSKRWRTLFAVRRNLDFDDSIISHPEVGEQNMD 67
Query: 70 IPARSLADFINQTLIRRPSTSPPLQKFHLQFDFKEHLYSSHVDSWVRYAILHHVQQLELD 129
S DF+++ L + S P+ KF L + K VD W+ A+ H V +L L
Sbjct: 68 DVQESFRDFVDKRLAFQGSV--PINKFSLIYGDKHD--DVRVDRWINTALEHGVSELHLC 123
Query: 130 FYISREFQTSDIESDYDFPFFLLKNGNVKILKLTKCRITLPTNV------ASMGLSFLKS 183
TS + FP + ++ T ++TL TN+ + L LK
Sbjct: 124 L-------TSVTRRLHRFPSNVFRST-------TLVKLTLGTNLFIVYFPSDTCLPVLKI 169
Query: 184 VFLDQVYLSDEMVSN-LISGCVNLVFLGLEYCY--GMKDVKICSLKITVLHLNYFTCED- 239
+ LD ++ SN L++GC L L ++ G+ +V + S + L + Y D
Sbjct: 170 LVLDSIWFDRIKFSNVLLAGCPALEDLTIDQKSFPGLPNV-VSSKTVKSLSIVYKYSADF 228
Query: 240 ---GSLEISCPNLVSLEMIGFHVEKYDFKNLSGLVEA 273
++ + PNLV+L + +Y NL LV A
Sbjct: 229 DWFRTVALDTPNLVTLLYSTYARHRYRHCNLESLVNA 265
>AT3G59160.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s:
Cyclin-like F-box (InterPro:IPR001810), FBD-like
(InterPro:IPR006566), Leucine-rich repeat 2
(InterPro:IPR013101); BEST Arabidopsis thaliana protein
match is: F-box family protein (TAIR:AT3G59170.1); Has
1270 Blast hits to 1227 proteins in 8 species: Archae -
0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1270;
Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
| chr3:21875023-21876641 FORWARD
Length = 464
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 132/328 (40%), Gaps = 59/328 (17%)
Query: 17 LNDLPEEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLSSLNFPYS-------------- 62
+NDLP+ +L H+LS+L+TK A TSLL R+WRYL + +L F S
Sbjct: 15 INDLPDALLCHVLSYLTTKEAASTSLLSRRWRYLLAFVPNLEFDDSAYLHRDKRVKNPLH 74
Query: 63 ---------SVSTATSIPARSLADFINQTLIRRPSTSPPLQKFHLQFDFKEHLYSSH-VD 112
+V + S DF+++ L + ++ PL KF L+ V
Sbjct: 75 EKGLVGFVLTVDDKRKKLSTSFPDFVDRILDLQGNS--PLDKFSLKMVDDHDPVDPDCVA 132
Query: 113 SWVRYAILHHVQQLELDFYISREFQTSDIESDYDFP--FFLLKNGNVKILKLT-KCRITL 169
W+ ++ V L L D+ P FL + ++KLT K R
Sbjct: 133 PWIHKVLVRGVSDLHL---------VIDMNEWTSLPAKIFLTET----LVKLTLKIRDGP 179
Query: 170 PTNVASMGLSFLKSVFLDQVYLSDEMV--SNLISGCVNLVFLGLEYCYGMKDVKICSLKI 227
P +V + L LK++ L+ V +E + S L+SGC L L L + + CS+ +
Sbjct: 180 PIDVKHVHLPKLKTLHLESVMFDEEDIGFSKLLSGCPELEELVLHHIWSCVWTS-CSVSV 238
Query: 228 TVLHLNYFTCED-----------GSLEISCPNLVSLEMIGFHVEKYDFKNLSGLVEAGVA 276
L F C + ++ PNLV LE Y N LVEA +
Sbjct: 239 ATLKRLTFCCNNMKFCGMHEENPNNVSFDTPNLVYLEYAEVIANNYPKVNFDSLVEAKI- 297
Query: 277 FLHMWKYYRHWSQVMRFLLHVKRLTVQN 304
+W +V ++ K + V N
Sbjct: 298 --DIWMTNDQLDEVRIRDIYEKNVMVGN 323
>AT2G42720.1 | Symbols: | F-box family protein |
chr2:17785653-17787211 FORWARD
Length = 443
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 123/272 (45%), Gaps = 37/272 (13%)
Query: 17 LNDLPEEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLSSLNFPYSSVSTATSIPARSLA 76
++ LP+EIL HILSFLSTK A TS L +W+ ++ + SL+ Y+ R
Sbjct: 4 ISSLPDEILEHILSFLSTKEAALTSSLSTRWKNVFVFVPSLHLDYARQHEN----PREFI 59
Query: 77 DFIN--QTLIRRPSTSPPLQKFHLQFDFKEHLY---SSHVDSWVRYAILHHVQQLELDFY 131
DF++ TL R S P++K L+ K++ +HV SW+ + +L +LD +
Sbjct: 60 DFVDFVNTLFNRKGNS-PIKKLALKIHLKDNQSLQNQTHVQSWI-HRVLSRGGVTDLDLF 117
Query: 132 IS--REFQTSDIESDYDFPFFLLKNGNVKILKLTKCRITLPTNVASMGLSFLKSVFLDQV 189
I+ +FQ P + K+ + L+L + T+ ++ L LK++ LD V
Sbjct: 118 ITFKGKFQL--------VPLLIFKSNTLVKLRLGRG-FTIKLCHENVYLPMLKTLCLDTV 168
Query: 190 YLSDE--MVSNLISGCVNLVFLGLE------YCYGMKDVKICSLKITVLHLNYFTCEDGS 241
+ + L+ C L L LE +C + + L+I H+ +
Sbjct: 169 DFDGDHNVFETLLPRCPLLEELVLEDQRWKQWCGSVSSPSLKRLRIRFFHIPIIS----- 223
Query: 242 LEISCPNLVSLEMIGFHVEKYDFKNLSGLVEA 273
+ P LV LE+ KY NL LVEA
Sbjct: 224 --LDVPGLVYLELSCIFGSKYANVNLDSLVEA 253
>AT4G14103.1 | Symbols: | F-box family protein |
chr4:8126948-8128305 FORWARD
Length = 381
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 128/272 (47%), Gaps = 32/272 (11%)
Query: 17 LNDLPEEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLSSLNFP---YSSVSTATSIPAR 73
++ LP++I +HILSFL TK A TS+L +KWRYL+ + +L+ Y + T I +
Sbjct: 10 ISSLPDDISSHILSFLPTKEAASTSVLSKKWRYLFAFVPNLDLDDSVYLNPENETEI-ST 68
Query: 74 SLADFINQTLIRRPSTSPPLQKFHLQFDFKEHLYSSHVDSWVRYAILHHVQQLELDFYIS 133
S DF+++ L + ++ PL KF L+ + + + W+ + V L+L
Sbjct: 69 SFMDFVDRVLALQGNS--PLHKFSLK--IGDGIDPVRIIPWINNVLERGVSDLDLHL--- 121
Query: 134 REFQTSDIESDYDFP--FFLLKNGNVKILKLTKCRITL-PT-NVASMGLSFLKSVFLDQV 189
++ES++ P +L K L K R L PT +V + L LK+++++
Sbjct: 122 ------NLESEFLLPSQVYL-----CKTLVWLKLRFGLYPTIDVEDVHLPKLKTLYIEAT 170
Query: 190 YLSDEMV--SNLISGCVNLVFLGLE----YCYGMKDVKICSLKITVLHLNYFTCEDGSLE 243
+ + V + L+SGC L L L+ + + V + +LK S+
Sbjct: 171 HFEEHGVGLTKLLSGCPMLEDLVLDDISWFIWDFASVSVPTLKRLRFSWQERDEFPKSVL 230
Query: 244 ISCPNLVSLEMIGFHVEKYDFKNLSGLVEAGV 275
+ PNLV L+ KY NL LVEA +
Sbjct: 231 LDTPNLVYLKFTDTVAGKYPKVNLDSLVEAHI 262
>AT3G59190.1 | Symbols: | F-box family protein |
chr3:21884740-21886101 FORWARD
Length = 388
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 120/278 (43%), Gaps = 35/278 (12%)
Query: 17 LNDLPEEILTHILSFLSTKSAIQTSLLCRKWRYLWC-----QLSSLNFPYSSVSTATSIP 71
+++LP+ +L H+LSFL T A TS+L ++WR+L L ++ + + +
Sbjct: 14 ISNLPDALLCHVLSFLPTTEAASTSVLAKRWRFLLAFVPNLDLDNMIYDRPKMGRRKRLE 73
Query: 72 AR-SLADFINQTLIRRPSTSPPLQKFHLQFDFKEHLYSSHVDSWVRYAILHHVQQLELDF 130
R S F+++ + + + PL+KF L+ S V+ WV + V+ ELD
Sbjct: 74 LRKSFKLFVDRVMALQGNA--PLKKFSLRCKIGSD--PSRVNGWVLKVLDRGVE--ELDL 127
Query: 131 YISREFQTSDIESDYDFPFFLLKNGNVKILKLTKCRITLPTNVASMGLSFLKSVFLDQVY 190
YI+ E++ Y P +L + LK++ +V L LK++ L +
Sbjct: 128 YIASEYE-------YPLPPKVLMTKTLVSLKVSGTD-EFTIDVGEFFLPKLKTLHLSAIS 179
Query: 191 LSDEM---VSNLISGC---VNLVFLGLEYCYGMKDVKICSLKITVLHLNYFTCED----- 239
DE + LIS C LV + + + Y + CS+ L CE+
Sbjct: 180 FGDEGGPPFAKLISACHALEELVMIKMMWDYW----EFCSVSSPSLKRVSIDCENIDENP 235
Query: 240 GSLEISCPNLVSLEMIGFHVEKYDFKNLSGLVEAGVAF 277
S+ PNLV LE KY N LVEA +
Sbjct: 236 KSVSFDTPNLVYLEFTDTVAVKYPKVNFDSLVEASIGL 273
>AT5G41840.1 | Symbols: | F-box family protein |
chr5:16754436-16756263 REVERSE
Length = 540
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 128/298 (42%), Gaps = 51/298 (17%)
Query: 17 LNDLPEEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLSSLNFPYS------SVSTATSI 70
++ LP+ ++ HILSFL TK A T++L ++W+ L + +LNF S + S
Sbjct: 16 ISGLPDALICHILSFLPTKEAASTTVLAKRWKPLLAFVPNLNFDDSIYFHPRARRNKYSK 75
Query: 71 PARSLADFINQTLIRRPSTSPPLQKFHLQFDFKEHLYSSHVDSWVRYAILHHVQQLELDF 130
S F++ L + T PL++FH++ + + + S V W+ + V L++D
Sbjct: 76 SYESFMSFVDSVLALQAKTKTPLKRFHVKCE--DVVDQSWVLEWIPKVLKRGV--LDIDL 131
Query: 131 YISREFQTSDIESDYDFP--FFLLKNGNVKILKLTKCRITLPTNV-----ASMGLSFLKS 183
+I+ + S Y P F+ K L + +I V + L LK+
Sbjct: 132 HITSSRNYCENSSFYSLPSKIFVSKT-------LVRLKIQFQDGVHIDVEGGVSLPKLKT 184
Query: 184 VFLDQVYLSDEMVSNLISGC---VNLVFLGLEYCYGMKDVKICSLKI---TVLHLNYFTC 237
+ LD + M++ L+SGC LV L + +D + C + + T+ LN+
Sbjct: 185 LHLDYFKIETSMLNKLLSGCHALEELVLANLMWADSSED-EACHVSVSIPTLKRLNFCRS 243
Query: 238 ED--------------------GSLEISCPNLVSLEMIGFHVEKYDFKNLSGLVEAGV 275
ED SL PNLV LE V+KY + LVEA +
Sbjct: 244 EDFYEGEFHFYEDYDEENINEGVSLSFDNPNLVYLEYSDVIVDKYKQVSFDSLVEANL 301
>AT3G59230.1 | Symbols: | F-box family protein |
chr3:21896052-21897787 REVERSE
Length = 491
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 133/303 (43%), Gaps = 54/303 (17%)
Query: 17 LNDLPEEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLSSLNF-------PYSSVSTATS 69
+N LPE ++ HILSFLSTK A TSLL RKWRY + + +L+F P T
Sbjct: 14 INSLPEALIYHILSFLSTKEAAITSLLSRKWRYFFAFVPNLDFDDPVRMQPDMGNQEETE 73
Query: 70 IPARSLADFINQTLIRRPSTSPPLQKFHLQFDFKEHLYSSHVDSWVRYAILHHVQQLELD 129
I S DF+++ L R ++ + KF L+ + V W+ + V +L+L
Sbjct: 74 I-HTSFMDFVDRVLALRGNSH--VNKFSLK--CGNGVDGVGVTRWILNTLELSVSELDLS 128
Query: 130 FYISREFQTSDIESDYDFP--FFLLKNGNVKILKLTKCRI---------TLPTNVASMGL 178
SD + Y FP F+ K+ L + RI +L +V + L
Sbjct: 129 I-------ASD--TTYLFPSKVFVSKS-------LVRLRIEARNGLAFGSLVIDVGDVSL 172
Query: 179 SFLKSVFLDQVYLSDEMV--SNLISGC---VNLVFLGLEYCYGMKDVKICSLKITVLHLN 233
LK+++LD V L +++ + L+SGC LV + + + + + CS I L
Sbjct: 173 PKLKTLYLDSVELDYQIICLAKLLSGCHVLEELVMIDVVWNFW----ESCSASIPTLKRL 228
Query: 234 YFTCEDG------SLEISCPNLVSLEMIGFHVEKYDFKNLSGLVEAGVAFLHMWKYYRHW 287
F E+G S+ P LV E KY+ N LVEA + ++ +
Sbjct: 229 TFFTEEGWNNPPPSVTFDNPALVYFEYTDTVALKYEKVNFDSLVEARLGLRVGYEESENP 288
Query: 288 SQV 290
QV
Sbjct: 289 IQV 291
>AT3G49030.1 | Symbols: | F-box family protein |
chr3:18173138-18174769 FORWARD
Length = 443
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 144/305 (47%), Gaps = 41/305 (13%)
Query: 14 DHSLNDLPEEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLSSLNFPYSSVSTATSIPAR 73
+ +++LPE++L ILS + T++ I TS+L ++WR LW + +L F + T P
Sbjct: 20 EDRISELPEDLLLQILSDIPTENVIATSVLSKRWRSLWKMVPNLTFDF------TFDP-- 71
Query: 74 SLADFINQTLIRRPSTSPPLQKFHLQFDFKEHLYSSHVDSWVRYAILHHVQQLEL-DFYI 132
++ L R ++ LQ +F + ++ W+ A + HV++L L F
Sbjct: 72 KYHQTFSENLYRSLTSHEASVLESLQLNFTRGIDGLNIGMWIATAYVRHVRKLVLVSFGD 131
Query: 133 SREFQTSDIESDYDFPFFLLKNGNVKILKLTK-CRITLPTNVASMGLSFLKSVFLDQVYL 191
R+ + + ++F N + IL++ + LP+ V L L+ + L +V+
Sbjct: 132 VRDKRARFRSALFNF------NDTLDILEIQDYILLDLPSPVC---LKSLRELRLYEVHF 182
Query: 192 SDEM-VSNLISGCVNLVFLGLEYCYGMKDVKICSLKITVLHLNYFTCED-------GSLE 243
DE V NL+ GC +L L + + ++V + + I V L T D G
Sbjct: 183 KDEASVCNLLCGCPSLEVLSV---HRERNVDVETFTIVVPSLQRLTIYDFCIGGGKGGYV 239
Query: 244 ISCPNLVSLEMIGFHVEKYDF---KNLSGLVEAGVAFL-HMWKYYRHWSQVMRFLLHVKR 299
I+ P+L L ++GF E DF +N LVEA ++ + H+ ++ L VKR
Sbjct: 240 INAPSLKYLNIVGF--EGLDFCLIENAPELVEAEISDVSHIAN-----ENILESLTSVKR 292
Query: 300 LTVQN 304
L++++
Sbjct: 293 LSLES 297
>AT3G59240.1 | Symbols: | F-box family protein |
chr3:21898682-21900364 REVERSE
Length = 504
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 122/273 (44%), Gaps = 28/273 (10%)
Query: 17 LNDLPEEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLSSLNFPYS----SVSTATSIPA 72
++DLPE ++ H+LSF+ TK A TSLL KWRYL+ L+F S S +
Sbjct: 10 ISDLPEALICHLLSFVPTKEAALTSLLSEKWRYLFAFAPILDFDDSVWMQSPLVYMNEVH 69
Query: 73 RSLADFINQTLIRRPSTSPPLQKFHLQFDFKEHLYSSHVDSWVRYAILHHVQQLEL--DF 130
R DF+++ L + +++ L +F L + + + + W+ I V L+L +F
Sbjct: 70 RKFMDFVDRVLGLQGNST--LVRFSL--NCRNGIDRECIFRWISNVIERGVSDLDLGGNF 125
Query: 131 YISREFQTSDIESDYDFPFFLLKNGNVKILKLTKCRITLPTNVASMGLSFLKSVFLDQVY 190
+R +S F+ K+ ++ C I ++ + L LK++ L ++
Sbjct: 126 VSNRSMPSS---------VFVSKSLVKLRIRTENCTI---IDLEDVFLPKLKTLDLSSIW 173
Query: 191 L--SDEMVSNLISGCVNLVFLGLE----YCYGMKDVKICSLKITVLHLNYFTCEDGSLEI 244
D + LISGC L L + Y + + +LK +H + + GS+
Sbjct: 174 FRDGDTCLLKLISGCQVLEDLTMSDLWWDGYWNRSMSSKTLKRLTVHCSDWDRSPGSISF 233
Query: 245 SCPNLVSLEMIGFHVEKYDFKNLSGLVEAGVAF 277
PNLV E +KY+ N LVEA +
Sbjct: 234 DTPNLVYFEYFDLVADKYEVVNFDSLVEASIGL 266
>AT4G15060.1 | Symbols: | F-box protein-related |
chr4:8599035-8601761 FORWARD
Length = 572
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 135/302 (44%), Gaps = 42/302 (13%)
Query: 20 LPEEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLSSLNFPYSSVSTATSIPARSLADFI 79
LP+++L +L FL TK A+ TS+L ++W +LW L L + ++ S + RS FI
Sbjct: 177 LPDDLLVKVLLFLPTKIAVSTSILSKRWEFLWMWLPKLEYHNTNYSASEEQRLRS---FI 233
Query: 80 NQTLIRRPSTSPPLQKFHLQFDFKEHLYSSHVDSWVRYAILHHVQQLELDFYISREFQTS 139
N L + +P ++ L+F + ++ W+ A+ V++L ++ F
Sbjct: 234 NLNL--QLHRAPIIESLRLKFSLGRSIKPQNIKQWIIIAVFRCVRELSINL-----FPLY 286
Query: 140 DIESDYDFPFFLLKNGNVKILKLTKCRITLPTNVASMG-LSFLKSVFLDQV-YLSDEMVS 197
IE+ P L + ++ ILKL + + +V M L LK + L +V Y +
Sbjct: 287 CIENPAKLPSSLYISKSLVILKL---KDQILVDVPRMAYLPSLKYLLLKRVTYKDSNSLH 343
Query: 198 NLISGCV---NLVFLGLEYCYGMKDVKICSLKITVLHLNYFTCE---DGSLE---ISCPN 248
L+S C NLV EY + +L ITV L T + GS + I+ P+
Sbjct: 344 QLLSSCPVLKNLVVERDEYNHDE------TLSITVSSLQRLTLKISRGGSFDELVINTPS 397
Query: 249 LVSLEMIGFHVE----------KYDFKNLSGLVEAGV--AFLHMWKYYRHWSQVMRFLLH 296
L ++ + E Y FK++ L EA + + + K+ R + V R L
Sbjct: 398 LKYFKLTDYLGECETELDDDSYSYVFKDMPKLEEAHIDSTYPDIGKFVRSITSVKRLSLC 457
Query: 297 VK 298
VK
Sbjct: 458 VK 459
>AT3G58880.1 | Symbols: | F-box family protein |
chr3:21768485-21770167 REVERSE
Length = 454
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 118/274 (43%), Gaps = 28/274 (10%)
Query: 17 LNDLPEEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLSSLNF-------PYSSVSTATS 69
++ LP+++L HILS L+TK A TS+L ++WRYL + L F P T
Sbjct: 5 VSSLPDDLLGHILSLLTTKEAALTSILSKRWRYLIAFVPYLEFDDSAFLNPEEGKQTREG 64
Query: 70 IPARSLADFINQTLIRRPSTSPPLQKFHLQFDFKEHLYSSHVDSWVRYAILHHVQQLELD 129
+S DF+++ L + P++KF L+ K + ++ W+ + V ++L
Sbjct: 65 T-RQSFIDFVDRVLALHGDS--PIRKFSLK--CKTGVDLDLLNQWICNVLQRGVLLIDLS 119
Query: 130 FYISREFQTSDIESDYDFPFFLLKNGNVKILKLTKCRITL-PTNVASMGLSFLKSVFLDQ 188
D+ F + V++ + CRI P ++++ L LK++ LD
Sbjct: 120 M---------DLGHRCMFIEIFMSRTLVELKLGSGCRIAFGPEHISA--LPMLKTLTLDS 168
Query: 189 VYLSDE-MVSNLISGCVNLVFLGLEYCYGM---KDVKICSLKITVLHLNYFTCEDGSLEI 244
V SD + L+S C L L L +G V I SLK + +
Sbjct: 169 VSWSDSGQLERLLSACPALEALNLANVHGSYPNATVSIASLKTLTIKSVSLSGPAHVFSF 228
Query: 245 SCPNLVSLEMIGFHVEKYDFKNLSGLVEAGVAFL 278
PNL+ L + Y NL LVEA + F+
Sbjct: 229 DTPNLLCLNYTALFEDDYPLVNLEYLVEAQIKFV 262
>AT1G61330.1 | Symbols: | F-box family protein |
chr1:22622975-22624527 FORWARD
Length = 447
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 92/196 (46%), Gaps = 18/196 (9%)
Query: 20 LPEEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLSSLNFP-YSSVSTATSIPARSLADF 78
L +E++ ILSFL +S +Q +L +++R W L+F SV + S R + D
Sbjct: 15 LSDELVECILSFLPVQSTLQHRVLSKRYRDTWKLSRDLDFSGIFSVRRSQSEAVRIIEDV 74
Query: 79 INQTLIRRPSTSPPLQKFHLQFDFKEHLYSSHVDSWVRYAILHHVQQLELDFYISREFQT 138
Q P + +F L D + SWV + ++++L LDF S++
Sbjct: 75 FIQ------HQGPEIDRFVLSLDHTG--VEDKILSWVDTCLRKNIKELVLDFSSSKKV-- 124
Query: 139 SDIESDYDFPFFLLKNGNVKILKLTKCRITLPTNVASMGLSFLKSVFLDQVYLSDEMVSN 198
+ P + + +LKL CR +P N+ GL LK++ L + +++EM+ +
Sbjct: 125 ------MEIPLNFSSSETLTVLKLQWCRFEIPNNLPK-GLRLLKTLSLMRTEVTNEMIDS 177
Query: 199 LISGCVNLVFLGLEYC 214
+ + C++L L L C
Sbjct: 178 IFNNCIHLESLELVKC 193
>AT1G58310.1 | Symbols: | F-box family protein |
chr1:21631947-21633642 FORWARD
Length = 505
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 128/285 (44%), Gaps = 40/285 (14%)
Query: 17 LNDLPEEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLSSLNFPYS-------------- 62
++ LP+ +L HILSFL+TK A TS+L +KWRYL+ + +L+F S
Sbjct: 10 ISGLPDSLLCHILSFLNTKEAASTSVLAKKWRYLFASVPNLDFDDSVHLRLGKRNPAVSG 69
Query: 63 -----SVSTATSIPARSLADFINQTLIRRPSTSPPLQKFHLQFDFKEHLYSSHVDSWVRY 117
++ + + S DF++Q L R + PL KF L+ ++ + + W+
Sbjct: 70 EDYLKMINERSDQLSTSFMDFVDQVL--RLQDNSPLHKFSLK--IRDCVDIVRIICWILK 125
Query: 118 AILHHVQQLELDFYISREFQTSDIESDYDFPFFLLKNGNVKILKLTKCRITLPTNVASMG 177
+ V LELD ++ ++++S P + + + LKL+ R +V +
Sbjct: 126 VLERGVSDLELDMHL--KWKSS-------LPSKIFLSETLVRLKLSVERGPF-IDVEDVH 175
Query: 178 LSFLKSVFLDQVYLSDEMV--SNLISGCVNLVFLGLEYC----YGMKDVKICSLKITVLH 231
L LK++ + V + + L+SGC L L LEY + V + +LK
Sbjct: 176 LPKLKTLHIVSVKFEKHGIGLNKLLSGCHILEELNLEYISWCLWDFVSVSLTTLKRLTFC 235
Query: 232 LNYFTCEDG-SLEISCPNLVSLEMIGFHVEKYDFKNLSGLVEAGV 275
E+ S+ + PNLV L ++Y N LVEA +
Sbjct: 236 GEVMQDENPISVSFNTPNLVYLMFTDAIADEYSTVNFDSLVEAHI 280
>AT3G59000.1 | Symbols: | F-box family protein |
chr3:21799757-21801536 FORWARD
Length = 491
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 88/182 (48%), Gaps = 20/182 (10%)
Query: 17 LNDLPEEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLSSLNF-------PYSSVSTATS 69
+ LP+E+L+HILSFL+TK A TSLL ++WRYL + +L F P
Sbjct: 4 VGSLPDELLSHILSFLTTKEAALTSLLSKRWRYLIAFVPNLAFDDIVFLHPEEGKPERDE 63
Query: 70 IPARSLADFINQTLIRRPSTSPPLQKFHLQFDFKEHLYSSHVDSWVRYAILHHVQQLELD 129
I +S DF+++ L + + P++KF L+ + + S VD W+ + V +L+L
Sbjct: 64 I-RQSFMDFVDRVLALQAES--PIKKFSLK--CRIGVDSDRVDGWISNVLNRGVSELDLL 118
Query: 130 FYISREFQTSDIESDYDFPFFLLKNGNVKILKLT-KCRITLPTNVASMGLSFLKSVFLDQ 188
+ + S S F + ++KL C I + S+ L LK++ LD
Sbjct: 119 IILGMTMEDSYRLSPKGF-------ASKTLVKLEIGCGIDISWVAGSIFLPMLKTLVLDS 171
Query: 189 VY 190
V+
Sbjct: 172 VW 173
>AT5G38396.1 | Symbols: | F-box family protein |
chr5:15373094-15374726 FORWARD
Length = 462
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 125/279 (44%), Gaps = 40/279 (14%)
Query: 17 LNDLPEEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLSSLNF-------PYSSVSTATS 69
L ++P+E++ HILSFL+TK A TS+L ++WR L +S+L+ P
Sbjct: 4 LRNIPDELICHILSFLTTKEAALTSVLSKRWRNLLAFVSNLHIDDSIFLHPEEGKRDRNE 63
Query: 70 IPARSLADFINQTLIRRPSTSPPLQKFHLQFDFKEHLYSSHVDSWVRYAILHHVQQLELD 129
I +S DF+ + L + + P++K ++F FK L S VD W+ + V +L+L
Sbjct: 64 I-RQSFLDFVGRILALQGNC--PVKKVSIKFLFK--LDSDRVDGWISNVLARGVSELDLS 118
Query: 130 FYISREFQTSDIESDYDFPFFLLKNGNVK---ILKLTKCRITLPTNVASMG-------LS 179
+ + +FLL + + +++L R+ + ++G L
Sbjct: 119 IDLCMD------------EYFLLSSKRFESKNLVRLKLHRLCIGQREKTVGWLAGEIFLP 166
Query: 180 FLKSVFLDQV-YLSDEMVSNLISGCVNLVFLGLEYCYGMKDVKIC--SLKITVLHLNYFT 236
LK++ LD V + D + + LV + + DV + SLK + N ++
Sbjct: 167 MLKTLELDYVGFYGDLLFLRALPALEELVIVDAFWFTTFTDVTVSNPSLKTLTMSSNIYS 226
Query: 237 CEDGSLEISCPNLVSLEMIGFHVEKYDFKNLSGLVEAGV 275
GS+ P+LV + + Y N+ L+EA +
Sbjct: 227 ---GSISFDTPSLVYFSHFKYVAKDYPLVNMENLLEARI 262
>AT3G52680.2 | Symbols: | F-box family protein |
chr3:19527075-19528838 FORWARD
Length = 456
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 137/296 (46%), Gaps = 28/296 (9%)
Query: 17 LNDLPEEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLSSLNFPYSSVSTATSIPARSLA 76
+++LP+ +L ILS L T + TS+L ++WR LW + +L F + + +
Sbjct: 23 ISELPDGLLLKILSSLPTNIVVATSVLSKQWRSLWKLVPNLEFDSDDYESE----HYTFS 78
Query: 77 DFINQTLIRRPSTSPPLQKFHLQFDFKEHLYSSHVDSWVRYAILHHVQQLELDFYISREF 136
+ + ++ + +P L+ F L+F + + WV A H+++L LDFY +
Sbjct: 79 EIVCKSFLSH--KAPVLESFRLKF---VNFNPVDIGLWVGIAFSRHLRELVLDFYPAELG 133
Query: 137 QTSDIESDYDFPFFLLKNGNVKILKLTKC-RITLPTNVASMGLSFLKSVFLDQVYLSDE- 194
+ + FP L ++ LKL C + +P+ V + L+++ L+ V DE
Sbjct: 134 KG----VTFTFPSSLCTCNTLETLKLVLCILVDIPSPVL---MKSLRTLHLEFVRYKDES 186
Query: 195 MVSNLISGCVNLVFLGLEYCYGMKDVKICSLKITVLH-LNYFTCEDG----SLEISCPNL 249
V NL+SGC L L L Y D+K+ ++++ L L DG I+ P L
Sbjct: 187 SVRNLLSGCPGLEELRL-YRGDDSDIKVFTIEVPSLQRLTIHDNNDGPEFWGYVINAPFL 245
Query: 250 VSLEMIGFHVEKYDFKNLSGLVEAGVA---FLHMWKYYRHWSQVMRFLLHVKRLTV 302
L + ++ N LVEA +A + + K+ ++ V R LL++ L +
Sbjct: 246 KYLLIEELRCPEFCL-NAPELVEANIAEVTSITIEKFLGSFTSVSRLLLNLSPLKI 300
>AT3G52680.1 | Symbols: | F-box family protein |
chr3:19527075-19528838 FORWARD
Length = 456
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 137/296 (46%), Gaps = 28/296 (9%)
Query: 17 LNDLPEEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLSSLNFPYSSVSTATSIPARSLA 76
+++LP+ +L ILS L T + TS+L ++WR LW + +L F + + +
Sbjct: 23 ISELPDGLLLKILSSLPTNIVVATSVLSKQWRSLWKLVPNLEFDSDDYESE----HYTFS 78
Query: 77 DFINQTLIRRPSTSPPLQKFHLQFDFKEHLYSSHVDSWVRYAILHHVQQLELDFYISREF 136
+ + ++ + +P L+ F L+F + + WV A H+++L LDFY +
Sbjct: 79 EIVCKSFLSH--KAPVLESFRLKF---VNFNPVDIGLWVGIAFSRHLRELVLDFYPAELG 133
Query: 137 QTSDIESDYDFPFFLLKNGNVKILKLTKC-RITLPTNVASMGLSFLKSVFLDQVYLSDE- 194
+ + FP L ++ LKL C + +P+ V + L+++ L+ V DE
Sbjct: 134 KG----VTFTFPSSLCTCNTLETLKLVLCILVDIPSPVL---MKSLRTLHLEFVRYKDES 186
Query: 195 MVSNLISGCVNLVFLGLEYCYGMKDVKICSLKITVLH-LNYFTCEDG----SLEISCPNL 249
V NL+SGC L L L Y D+K+ ++++ L L DG I+ P L
Sbjct: 187 SVRNLLSGCPGLEELRL-YRGDDSDIKVFTIEVPSLQRLTIHDNNDGPEFWGYVINAPFL 245
Query: 250 VSLEMIGFHVEKYDFKNLSGLVEAGVA---FLHMWKYYRHWSQVMRFLLHVKRLTV 302
L + ++ N LVEA +A + + K+ ++ V R LL++ L +
Sbjct: 246 KYLLIEELRCPEFCL-NAPELVEANIAEVTSITIEKFLGSFTSVSRLLLNLSPLKI 300
>AT3G59170.1 | Symbols: | F-box family protein |
chr3:21878167-21879799 FORWARD
Length = 473
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 125/298 (41%), Gaps = 50/298 (16%)
Query: 17 LNDLPEEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLSSLNFPYSS------------- 63
+N LP+ +L HILSFL+TK A TSLL R+WRYL + +L F S
Sbjct: 9 INVLPDALLCHILSFLTTKEAASTSLLSRRWRYLLAFVPNLEFDDSVYLHRDKRVKNTLH 68
Query: 64 ----------VSTATSIPARSLADFINQTLIRRPSTSPPLQKFHLQF-DFKEHLYSSHVD 112
V+ + S DF+++ L + ++ PL KF L+ D + + V
Sbjct: 69 EKGFVGFVLLVNNKRKKLSTSFPDFVDRILALQGNS--PLDKFSLKMVDGHDPVDPDSVV 126
Query: 113 SWVRYAILHHVQQLELDFYISREFQTSDIESDYDFPFFLLKNGNVKILKLT-KCRITLPT 171
W+ ++ V L L ++ E+ + + S FL + ++KLT K R
Sbjct: 127 PWIHKVLVRGVSDLHLVVDMN-EWTSDPLPSR----IFLSET----LVKLTIKIRDGPFI 177
Query: 172 NVASMGLSFLKSVFLDQVYLSDEMVS--NLISGCV---NLVFLGLEYCY---------GM 217
+V + L LK+++L V + + L+SGC LV G+ C +
Sbjct: 178 DVKHVHLPKLKTLYLQSVMFDENDIGFRKLLSGCPVLEELVLDGMGSCVWTSFTVSVATL 237
Query: 218 KDVKICSLKITVLHLNYFTCEDGSLEISCPNLVSLEMIGFHVEKYDFKNLSGLVEAGV 275
K + C K++ + ++ PNLV LE Y N LVEA +
Sbjct: 238 KRLTFCCQKMSSFGYMHDDENPNNVSFDTPNLVYLEYAQVIANNYPKVNFDLLVEAKI 295
>AT4G00315.1 | Symbols: | F-box family protein | chr4:137404-138888
FORWARD
Length = 441
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 139/315 (44%), Gaps = 58/315 (18%)
Query: 18 NDLPEEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLSSLNFPYSSVSTATSIPARSLAD 77
+ LP+E+L +LSFL TK A++TSLL +W+ LW L L + + S + + LA
Sbjct: 5 SQLPDELLVKVLSFLPTKDAVRTSLLSMRWKSLWMWLPKLEYDFRHYSVSE---GQGLAR 61
Query: 78 FINQTLIRRPSTSPPLQKFHLQFDFKEHLYSSHVDSWVRYAI-LHHVQQLELDFYISREF 136
FI +L+ + + L++ + + WV A+ +V++L L E
Sbjct: 62 FITLSLLGHKAPAIESLSLKLRYGAIGSIKPEDIYLWVSLAVHDSNVRELSLKLCTFAER 121
Query: 137 QTSDIESDYDFPFFLLKNGNVKILKLT-KCRITLPTNVASMGLSFLKSVFLDQVYLSDE- 194
T P L K ++ ILKL + + +P V L LK++FL +V SDE
Sbjct: 122 PTK-------LPKSLYKCKSIVILKLKDEILVDVPRKVC---LPSLKTLFLGRVTYSDED 171
Query: 195 MVSNLISGCVNLVFLGLEYCYGMKDVKICSLKITVLHLNYFTCEDGSLEISCP------- 247
+ L+S C L L +E + + L + V L T L++SCP
Sbjct: 172 SLHRLLSNCPVLEDLVVER---DRIDNLGKLSVVVKSLQRLT-----LKMSCPCHLDGIM 223
Query: 248 -NLVSLEMIGFHVEK-----------------YDFKNLSGLVEAG--VAFLHMWKYYRHW 287
N SL+ + E+ YDF+++ L EA + F ++ K++
Sbjct: 224 MNTPSLKYLKVTDERQESDSDNESDSDSPRYFYDFEDMPKLEEADFVLTFQNIKKFF--- 280
Query: 288 SQVMRFLLHVKRLTV 302
+F+ +KRL++
Sbjct: 281 ----KFVTSIKRLSL 291
>AT5G03100.1 | Symbols: | F-box family protein | chr5:726832-727980
FORWARD
Length = 307
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 103/207 (49%), Gaps = 28/207 (13%)
Query: 17 LNDLPEEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLSSLNFPYSSVSTATSIPARSLA 76
++ LP+EIL HIL+ TK AI+TS+L ++W+++W + S++ + V
Sbjct: 11 ISSLPDEILHHILANTPTKLAIRTSVLSKRWKHVWYETPSISIVCNRVD----------P 60
Query: 77 DFINQTLIRRPSTSPPLQKFHLQFDFKEHLYSSHVDSWVRYAILHHVQQLELDFYISREF 136
D +N+TL ++P ++ F + + +D+W+ A+ + + L F F
Sbjct: 61 DSLNKTL--SSYSTPKIKSFDVT--ISRDVTVPEIDTWINLALSRKAENVSLRFTSHYRF 116
Query: 137 QTSDIESDYDFPFFLLKNGNVKILKLTKCRITL-PTNVASMGLSFLKSVFLDQVYLSDEM 195
+ + FF+ N ++K L LT L P V S S L+++ L++ +SD+
Sbjct: 117 RDT---------FFI--NSSLKQLSLTLVYCILNPKCVVSW--SSLRNLSLNRCKVSDDS 163
Query: 196 VSNLISGCVNLVFLGLEYCYGMKDVKI 222
++ +++GC L L L C + D+ +
Sbjct: 164 IAKILTGCSLLESLTLNLCDRLNDLDL 190
>AT4G13960.1 | Symbols: | F-box family protein |
chr4:8060681-8062231 REVERSE
Length = 434
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 119/273 (43%), Gaps = 55/273 (20%)
Query: 13 VDHSLNDLPEEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLSSLNF-------PYSSVS 65
+DH ++ LP+E+L HILSFL+TK A TS+L ++WR L+ + +L+ P
Sbjct: 1 MDH-VSSLPDEVLYHILSFLTTKEAALTSILSKRWRNLFTFVPNLDIDDSVFLHPQEGKE 59
Query: 66 TATSIPARSLADFINQTLIRRPSTSPPLQKFHLQFDFKEHLYSSHVDSWVRYAILHHVQQ 125
I +S F+++ L + ++ P++K L+ + S VD W+ A+ V +
Sbjct: 60 DRYEI-QKSFMKFVDRVLALQGNS--PIKKLSLK--LRTGFDSHRVDGWISNALARGVTE 114
Query: 126 LELDFYISREFQTSDIESDYDFPFFLLKNGNVKILKLTKCRITLPTNVASMGLSFLKSVF 185
L+L ++ LK +V++ L I LP LK++
Sbjct: 115 LDLLIILN---------------LVTLKLNSVRVDWLAAGDIFLP---------MLKTLV 150
Query: 186 LDQVYLSDEMVSNLISGCVNLVFLGLEYCYGMKDVKICSLKITVLHLNYFTCEDGSLEIS 245
L V L CV+ V +G KDV + + + +L +NY C G+ +
Sbjct: 151 LHSVRL-----------CVDNVN------WGGKDVNVSNASLKILTVNYNICL-GTFSVD 192
Query: 246 CPNLVSLEMIGFHVEKYDFKNLSGLVEAGVAFL 278
P+LV + Y + L EA ++ L
Sbjct: 193 TPSLVYFCFTEYVAIDYPVVIMQNLFEARISLL 225
>AT3G51530.1 | Symbols: | F-box family protein |
chr3:19112873-19114497 REVERSE
Length = 455
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 118/274 (43%), Gaps = 37/274 (13%)
Query: 14 DHSLNDLPEEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLSSLNFPYSSVSTATSIPAR 73
+ +++LPE +L ILS L TK I TS+L ++W LW + L F S R
Sbjct: 29 EDRISELPEVLLLQILSSLPTKLVISTSVLSKRWLSLWKMVQRLEFESS----------R 78
Query: 74 SLADFI-NQTLIRRPSTSPPLQKFHLQFDFKEHLYSSHVDSWVRYAILHHVQQLELDFYI 132
++ DF N T +P L+ HL+ + +V W A HV++ LD
Sbjct: 79 NIYDFAENVTRSLLSHKAPVLESLHLKVG--DQFDGVYVGVWATIAFTRHVREFVLDL-- 134
Query: 133 SREFQTSDIESDYDFPFFLLKNGNVKILKLTKCRITLPTNVASMGLSFLKSVFLDQVYLS 192
+S FP L ++ LKL I +P V+ L L L VY
Sbjct: 135 -----SSYHGPRVRFPTSLFCFDTLETLKLDYVYIYVPCPVSMKSLRTLH--LLSVVYKG 187
Query: 193 DEMVSNLISGCVNLVFLGLEYCYGMKDV-----KICSLKITVLHLNYFTCEDGSLE--IS 245
DE NL + C NL L L + V SLK T+L + F+ + S I
Sbjct: 188 DESGHNLFASCPNLEHLVLRRGFFFDAVVNFIIDAPSLK-TLLLSDPFSARESSRGYVIK 246
Query: 246 CPNLVSLEMIGFH-VEKYDF---KNLSGLVEAGV 275
P SL+ +G VE +++ +N++ LVEA +
Sbjct: 247 AP---SLKYLGIESVEGFEYFLIENVTELVEANI 277
>AT1G55030.1 | Symbols: | F-box family protein |
chr1:20530417-20531768 REVERSE
Length = 422
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 118/273 (43%), Gaps = 28/273 (10%)
Query: 11 SAVDHSLNDLPEEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLSSLNFPYSSVSTATSI 70
AV ++ LPE ++ IL L TK AI TS+L ++W+ W + L F S
Sbjct: 5 GAVTDMISQLPEPLILQILGSLPTKVAITTSVLSKQWQSHWKMMPKLEF--------DSF 56
Query: 71 PARSLADFINQTLIRRPSTSPPLQKFHLQFDFKEHLYSSHVDSWVRYAILHHVQQLELDF 130
R D N T +P LQ F L+ + + + A+ +V++L L+
Sbjct: 57 LRR--LDLENVTKCLLSHKAPVLQTFSLKVRLDRRNNAVDIGCLIGIAMTRNVRKLVLEV 114
Query: 131 YISREFQTSDIESDYDFPFFLLKNGNVKILKLT-KCRITLPTNVASMGLSFLKSVFLDQV 189
Y R + FP L ++ L+L + +P S+ L LK+++L V
Sbjct: 115 YFHR--------GTFTFPRSLYHCETLETLELILNVVMDVP---PSVYLKSLKTLYLLAV 163
Query: 190 -YLSDEMVSNLISGCVNLVFLGLEYCYGMK----DVKICSLKITVLHLNYFTCEDGSLEI 244
+ DE V NL+SGC NL L + + + SL+ +H T + I
Sbjct: 164 DFKDDESVINLLSGCPNLQDLVMRRNSSSNVKTFTIAVPSLQRLAIHNGSGTPQHCGYTI 223
Query: 245 SCPNLVSLEMIGFHV-EKYDFKNLSGLVEAGVA 276
+ P+L L++ G E + +N+S L+E +
Sbjct: 224 NTPSLKYLKLEGSKAFESFMVENVSELIEVNIT 256
>AT1G78760.1 | Symbols: | F-box family protein |
chr1:29615174-29616738 REVERSE
Length = 452
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 126/285 (44%), Gaps = 34/285 (11%)
Query: 14 DHSLNDLPEEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLSSLNFPYSSVSTATSIPAR 73
+ L++LPE ++ I+ + TK +++S+L ++WR LW + LN Y+ +
Sbjct: 15 EDRLSNLPESLICQIMLNIPTKDVVKSSVLSKRWRNLWRYVPGLNVEYNQF-----LDYN 69
Query: 74 SLADFINQTL-IRRPSTSPPLQKFHLQFDFKEHLYS-SHVDSWVRYAILHHVQQLE-LDF 130
+ F+++ L + R S Q F L++D E + S+V W+ + ++ L+ LD+
Sbjct: 70 AFVSFVDRFLALDRESC---FQSFRLRYDCDEEERTISNVKRWINIVVDQKLKVLDVLDY 126
Query: 131 YISREFQTSDIESDYDFPFFLLKNGNVKILKLTKCRITLPTNVASMGLSFLKSVFLDQVY 190
E + P + ++ LKL C + LP N + L +K + LD V
Sbjct: 127 TWGNE--------EVQIPPSVYTCESLVSLKL--CNVILP-NPKVISLPLVKVIELDIVK 175
Query: 191 LSDEMV-SNLISGCVNLVFLGLEYCYGMKDVKICSLKITVLHLNYF----TCEDG----S 241
S+ +V +IS C L L + + D+ + L+++ L F C DG
Sbjct: 176 FSNALVLEKIISSCSALESLIISR-SSVDDINV--LRVSSRSLLSFKHIGNCSDGWDELE 232
Query: 242 LEISCPNLVSLEMIGFHVEKYDFKNLSGLVEAGVAFLHMWKYYRH 286
+ I P L L + K+ KN LVEA + + + H
Sbjct: 233 VAIDAPKLEYLNISDHSTAKFKMKNSGSLVEAKINIIFNMEELPH 277
>AT3G59000.2 | Symbols: | F-box family protein |
chr3:21799757-21801536 FORWARD
Length = 345
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 66/125 (52%), Gaps = 12/125 (9%)
Query: 17 LNDLPEEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLSSLNF-------PYSSVSTATS 69
+ LP+E+L+HILSFL+TK A TSLL ++WRYL + +L F P
Sbjct: 4 VGSLPDELLSHILSFLTTKEAALTSLLSKRWRYLIAFVPNLAFDDIVFLHPEEGKPERDE 63
Query: 70 IPARSLADFINQTLIRRPSTSPPLQKFHLQFDFKEHLYSSHVDSWVRYAILHHVQQLELD 129
I +S DF+++ L + + P++KF L+ + + S VD W+ + V +L+L
Sbjct: 64 I-RQSFMDFVDRVLALQAES--PIKKFSLK--CRIGVDSDRVDGWISNVLNRGVSELDLL 118
Query: 130 FYISR 134
+ R
Sbjct: 119 IILER 123
>AT3G58920.1 | Symbols: | F-box family protein |
chr3:21776293-21777988 FORWARD
Length = 470
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 119/284 (41%), Gaps = 47/284 (16%)
Query: 17 LNDLPEEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLSSLNFPYSSVSTATSIPARSLA 76
+++LP EI+ HI+SFLS K A S+L ++W+ L+ + L F S + SL
Sbjct: 4 ISNLPNEIICHIVSFLSAKEAAFASVLSKRWQNLFTIVQKLEFDDSVKNQG------SLM 57
Query: 77 DFINQTLIRRPSTSPPLQKFHLQFD--FKEHLYSS-----HVDSWVRYAILHH-VQQLEL 128
DF+N L +T + KF L+FD K L + HV + +L V L+L
Sbjct: 58 DFVNGVLALPVTTR--ISKFSLRFDSFLKRKLETGLVIGPHVVNRCLCNVLKRGVLDLKL 115
Query: 129 DFYISREFQTSDIESDYDFPFFLLKNGNVKILKLTKCRIT-------LPTNVASMGLSFL 181
+ Y E Y P + + LKLT C +P N G L
Sbjct: 116 EIY---------GEDGYLLPSEVFTCKTIVDLKLTSCIFAESYVIDVIPENAFLPG---L 163
Query: 182 KSVFLDQVYLSDE---MVSNLISGCVNLVFLGL--------EYCYGMKDVKICSLKITVL 230
+S+FL ++ SD L+S C L L + ++ + + L I
Sbjct: 164 ESLFLKSIWFSDLRGCAFQTLLSACPVLKTLTIYDVQWEKWKWSRTVSSATLERLIIQRT 223
Query: 231 HLNYFTCED-GSLEISCPNLVSLEMIGFHVEKYDFKNLSGLVEA 273
YF D S+ P+L L+ I F E+Y NL +VEA
Sbjct: 224 EFTYFNGSDFKSITFDTPSLTYLKYIDFVPEEYPVVNLDSIVEA 267
>AT5G25860.1 | Symbols: | F-box family protein |
chr5:9016908-9018424 REVERSE
Length = 448
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 145/327 (44%), Gaps = 44/327 (13%)
Query: 5 NAATVFSAVDHSLNDLPEEILTHILSFLSTKSAIQTSLLCRKWR--------------YL 50
+ V S+ ++N LP+EIL ILS+L TK A+ TSL+ ++WR +L
Sbjct: 2 DTRKVKSSSRDAVNCLPDEILAKILSYLPTKRAVSTSLISKRWRNLFALMIQLFESQHHL 61
Query: 51 WCQLSSLNFPYSSVSTATSIPARSLADFINQTLIRRPSTSPPLQKFHLQFDFKEHLYSSH 110
+ S L +P + S DF+++TL + ++K + K +
Sbjct: 62 YLDDSDLVYPEEGKGEMKDV-QESFGDFVDKTL----TDCNTIKKLSILCPLKCCAHKD- 115
Query: 111 VDSWVRYAILHHVQQLELDFYISREFQTSDIESDYDFPFFLLKNGNVKILKLTKCRITLP 170
+D W+ +A+ V L++ F + + ++++ F +K ++KLT RI +
Sbjct: 116 IDQWLHHAMERGVVDLDMRFKMG----FTPTQNEWPCNVFTIKT----LVKLT-FRIEVG 166
Query: 171 TN----VASMGLSFLKSVFLDQVYLS-DEMVSNLISGCVNLVFLGLEYCYGMK------- 218
N L LKS+FL ++ + + + +++ GC L L L G +
Sbjct: 167 QNKMPYCPKGVLPVLKSLFLHAIWFACERLCHSMLPGCPILEELFLHDLRGYRYNDSPNF 226
Query: 219 DVKICSLKITVLHLNYFTCEDGSLEISCPNLVSLEMIGFHVEKYDFKN-LSGLVEA--GV 275
+ +LK +H N ++ P+L+ LE GF +Y + L+ LVE V
Sbjct: 227 SISHKTLKRLTVHFNNSFELGRPMQFDTPSLLYLEYSGFAPCRYSRTSYLNSLVEVKLDV 286
Query: 276 AFLHMWKYYRHWSQVMRFLLHVKRLTV 302
H + H S ++ ++ +VK L++
Sbjct: 287 HIRHECNTHMHLSPIIDWIGNVKTLSL 313
>AT1G66300.1 | Symbols: | F-box family protein |
chr1:24716497-24718050 REVERSE
Length = 456
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 117/271 (43%), Gaps = 38/271 (14%)
Query: 17 LNDLPEEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLSSLNFPYSSVSTATSIPARSLA 76
+ DLPE ++ H+L LSTK I+ +L KWRYLW + L+ S + +
Sbjct: 31 VRDLPESLICHVLLNLSTKDVIKNCVLSTKWRYLWRYVPGLDLDCSDFTEYN-----TFV 85
Query: 77 DFINQTLIRRPSTSPPLQKFHLQFDF----KEHLYSSHVDSWVRYAILHHVQQLELDFYI 132
F+++ L +T L KF L FD E ++ + W+ + VQ L+L++
Sbjct: 86 SFVDRFL--STNTESYLNKFKLGFDCDLVGDEETGNAQMARWINDVVKRKVQHLDLEW-- 141
Query: 133 SREFQTSDIESDYDFPFFLLKNGNVKILKLTKCRITLPTNVASMGLSFLKSVFLDQVYLS 192
+ P + ++ LKL + +P V L +K + LD V +
Sbjct: 142 ----------GALEIPPIVYVCKSLVSLKLCGVILPIPEFVC---LPSVKVIVLDWVKFA 188
Query: 193 DEM-VSNLISGCVNLVFLGLEYCYGMKD-VKICSLKI-TVLHLNYFTC-------EDGSL 242
+++ + LISGC LV L C D VK+ ++ ++L NY E+ +
Sbjct: 189 NDLALEMLISGC--LVLKSLTLCRSNNDNVKVLRVRSQSLLSFNYNGPNTMGPEYEELIV 246
Query: 243 EISCPNLVSLEMIGFHVEKYDFKNLSGLVEA 273
EI P L L + + KN S LV A
Sbjct: 247 EIDTPKLQDLTLSHRMTASFIIKNRSSLVGA 277
>AT4G00320.1 | Symbols: | F-box family protein | chr4:139939-141643
FORWARD
Length = 507
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 132/320 (41%), Gaps = 37/320 (11%)
Query: 10 FSAVDHSLNDLPEEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLSSLNFPYS------S 63
F ++ LP+ ++ HILSFL TK A T++L ++W+ L + +L+F S
Sbjct: 8 FDGSRDGISGLPDAMICHILSFLPTKVAASTTVLAKRWKPLLAFMPNLDFDESFRFDPRM 67
Query: 64 VSTATSIPARSLADFINQTLIRRPSTSPPLQKFHLQFDFKEHLYSSHVDSWVRYAILHHV 123
+ S ++ L + + L KF+++ E + + V W+ + V
Sbjct: 68 TCEERRKGSESFMLVVDSVLALQAEANATLNKFYVKC---EGVEQNSVLEWIPKVLKRGV 124
Query: 124 QQLELDFYISREFQTSDIESDYDFPFFLLKNGNVKILKLTKCRITLPTNVASMG---LSF 180
++L SR F ++ + Y P + + K L K + NV G L
Sbjct: 125 LDIDLQIPSSRGFGSN--STFYPLPSEIFVS---KTLVRLKIQFQDGANVNVEGDVSLPM 179
Query: 181 LKSVFLDQVYLSDEMVSNLISGCVNLVFLGL-----------EYCYGMKDVKICSLKITV 229
LK++ LD V + M+ L+SGC L L L E C+ V + +LKI
Sbjct: 180 LKTLHLDYVKMDTRMLQKLLSGCHTLEELLLMNLIWKESSEPEPCF--VSVSVRTLKILK 237
Query: 230 LHL--NYFTCEDGS----LEISCPNLVSLEMIGFHVEKYDFKNLSGLVEAGVAFLHMWKY 283
N+ +D L PNLV LE + +KY+ LV+A + K
Sbjct: 238 FSRFENFMKAKDFKPIVLLSFDIPNLVYLEYLDTIADKYEQVRFDSLVKASIGLCKTSKQ 297
Query: 284 YRH-WSQVMRFLLHVKRLTV 302
+ + V + + + +T+
Sbjct: 298 IENDNNNVTKLFMGICNVTI 317
>AT1G66310.1 | Symbols: | F-box family protein |
chr1:24722971-24724475 REVERSE
Length = 442
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 122/275 (44%), Gaps = 42/275 (15%)
Query: 17 LNDLPEEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLSSLNFPYSSVSTATSIPARSLA 76
L DLPE +L HIL L TK ++TS+L KWR LW + L+ S + +
Sbjct: 21 LRDLPESLLCHILLNLPTKDVVKTSVLSSKWRNLWRLVPGLDLDSSDFTENN-----TFV 75
Query: 77 DFINQTLIRRPSTSPPLQKFHLQF----DFKEHLYSSHVDSWVRYAILHHVQQLELDFYI 132
FI++ + L+KF L+F + E ++H+ W+ + V L+L +
Sbjct: 76 SFIDRFMSFHSDLY--LKKFKLRFFCNLNGDEVSENAHIARWINDVVKRKVHNLDLTW-- 131
Query: 133 SREFQTSDIESDYDFPFFLLKNGNVKILKLTKCRITLPTNVASMGLSFLKSVFLDQVYLS 192
+ P L ++ LKL C +TLP N+ L +K + L+ V +
Sbjct: 132 ----------GAVEIPPILYLCNSLVSLKL--CGVTLP-NLELTSLPCVKVIVLEWVKFA 178
Query: 193 DEM-VSNLISGCVNLVFLGLEYCYGMKD-VKICSLKITVLHLNYFTCEDGS--------- 241
+++ + LISGC LV L C D VKI L+++ L F+ S
Sbjct: 179 NDLALEMLISGC--LVLESLTLCRRPNDNVKI--LRVSSQSLLRFSYNGSSYKGLHDDLV 234
Query: 242 LEISCPNLVSLEMIGFHVEKYDFKNL-SGLVEAGV 275
LEI+ P L L++ + +N S +VEA +
Sbjct: 235 LEINAPKLKILKLFSHQLTTSFIRNTSSSIVEADI 269
>AT2G26030.3 | Symbols: | F-box family protein |
chr2:11091505-11093000 REVERSE
Length = 442
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 130/268 (48%), Gaps = 38/268 (14%)
Query: 19 DLPEEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLSSLNFPYSSVSTATSIPARSLADF 78
+LP+ +LT +LS+L T +++TS+L ++W +LW ++ L+ S P + A F
Sbjct: 8 ELPDSLLTQVLSYLPTIDSVKTSVLSKRWEFLWLRVPVLDLKVS------DFPDENYASF 61
Query: 79 INQTL-IRRPSTSPPLQKFHLQFDFKEHLY-SSHVDSWVRYAILHHVQQLELDFYISREF 136
I+ L R S ++KF L++D E+ Y + WV + +Q L+ ++ F
Sbjct: 62 IDNFLEFNRKSR---MRKFKLKYD--EYTYDDDRLAGWVVTTVDRGIQHLD-----AKGF 111
Query: 137 QTSDIESDYDFPFFLLKNGNVKILKLTKCRITLPTNVASMGLSFLKSVFLDQVYLSDE-- 194
+T+ ++ P + K + L L I P V S L LK + L+ V+ D+
Sbjct: 112 ETNMCVREF-MPQNIYKCNTLVSLMLVTVGIENPEFVVS--LPSLKIMHLEDVWYYDDPL 168
Query: 195 MVSNLISGCVNL----VFLGLEYCY--GMKDVKICSLKITVLHLNY---FTCEDGSLEIS 245
++ +ISGC L + +++C ++ +++ SL + L + +C S+EI
Sbjct: 169 IMEKIISGCPVLEDFVLIRPIDFCNLDVLQFLRVRSLSLRSFRLTFEYSVSCTYFSVEID 228
Query: 246 CPNLVSLEMIGFHVEKYD---FKNLSGL 270
P LE + F+ ++ D KN++ L
Sbjct: 229 APR---LEYLNFNDDQSDTIVVKNMTSL 253
>AT2G26030.1 | Symbols: | F-box family protein |
chr2:11091505-11093000 REVERSE
Length = 442
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 130/268 (48%), Gaps = 38/268 (14%)
Query: 19 DLPEEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLSSLNFPYSSVSTATSIPARSLADF 78
+LP+ +LT +LS+L T +++TS+L ++W +LW ++ L+ S P + A F
Sbjct: 8 ELPDSLLTQVLSYLPTIDSVKTSVLSKRWEFLWLRVPVLDLKVS------DFPDENYASF 61
Query: 79 INQTL-IRRPSTSPPLQKFHLQFDFKEHLY-SSHVDSWVRYAILHHVQQLELDFYISREF 136
I+ L R S ++KF L++D E+ Y + WV + +Q L+ ++ F
Sbjct: 62 IDNFLEFNRKSR---MRKFKLKYD--EYTYDDDRLAGWVVTTVDRGIQHLD-----AKGF 111
Query: 137 QTSDIESDYDFPFFLLKNGNVKILKLTKCRITLPTNVASMGLSFLKSVFLDQVYLSDE-- 194
+T+ ++ P + K + L L I P V S L LK + L+ V+ D+
Sbjct: 112 ETNMCVREF-MPQNIYKCNTLVSLMLVTVGIENPEFVVS--LPSLKIMHLEDVWYYDDPL 168
Query: 195 MVSNLISGCVNL----VFLGLEYCY--GMKDVKICSLKITVLHLNY---FTCEDGSLEIS 245
++ +ISGC L + +++C ++ +++ SL + L + +C S+EI
Sbjct: 169 IMEKIISGCPVLEDFVLIRPIDFCNLDVLQFLRVRSLSLRSFRLTFEYSVSCTYFSVEID 228
Query: 246 CPNLVSLEMIGFHVEKYD---FKNLSGL 270
P LE + F+ ++ D KN++ L
Sbjct: 229 APR---LEYLNFNDDQSDTIVVKNMTSL 253
>AT1G66320.1 | Symbols: | F-box family protein |
chr1:24727041-24728614 REVERSE
Length = 457
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 126/272 (46%), Gaps = 40/272 (14%)
Query: 19 DLPEEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLSSLNFPYSSVSTATSIPARSLADF 78
DLPE +L +L + TK ++TS++ +WR+LW + L+ + + +L F
Sbjct: 34 DLPESLLFQVLLNIPTKDLVKTSVVSPEWRHLWRCVPGLDLDEADFTQFD-----TLVSF 88
Query: 79 INQTL-IRRPSTSPPLQKFHLQF----DFKEHLYSSHVDSWVRYAILHHVQQLELDFYIS 133
I+ L I R S+ L KF L+ D + ++H+ W+ + +VQ ++L +
Sbjct: 89 IDSFLSINRESS---LNKFKLRIYCNHDRDKETNNAHMARWISAIVEQNVQHVDLTWL-- 143
Query: 134 REFQTSDIESDYDFPFFLLKNGNVKILKLTKCRITLPTNVASMGLSFLKSVFLDQVYLSD 193
+ P L ++ L+L C + L N+ M L +K + L+ V ++
Sbjct: 144 ----------PVEVPPILYLCESLVTLRL--CGVVL-ANLEFMYLPLVKVLALEWVIFAN 190
Query: 194 EM-VSNLISGCVNLVFLGLEYCY-GMKDVKICSLKI-TVLHLNYFTC-------EDGSLE 243
E+ + LISGC LV L +C + +V + ++ ++L NY+ +D ++
Sbjct: 191 ELALEKLISGC--LVLESLRFCKCSLDNVNVLRVRSQSLLSFNYYGPSSRDLHFKDLAVT 248
Query: 244 ISCPNLVSLEMIGFHVEKYDFKNLSGLVEAGV 275
I P L L++ + K LS LVEA +
Sbjct: 249 IDAPKLEILKLSHQVTSSFIIKKLSSLVEANI 280
>AT5G56370.2 | Symbols: | F-box family protein |
chr5:22836200-22837619 REVERSE
Length = 421
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 119/266 (44%), Gaps = 27/266 (10%)
Query: 16 SLNDLPEEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLSSLNFPYSSVSTATSIPARSL 75
S++ LP++ L ILS L TK + TS+L ++WRYLW + L YS + +
Sbjct: 3 SISLLPDDFLLRILSLLPTKDVLNTSVLSKRWRYLWKLVPKLQ--YSLIDKNAD--HGTF 58
Query: 76 ADFINQTLIRRPSTSPPLQKFHLQFDFKEHLYSSHVDS--WVRYAILHHVQQLELDFYIS 133
F++++L+ S +P L+ HL+ + S VD WVR A+ + +L+ D+
Sbjct: 59 VRFVDRSLLL--SMAPVLESLHLKLGRQ----CSEVDIGFWVRIAVEKGLCELDFDY--- 109
Query: 134 REFQTSDIESDYDFPFFLLKNGNVKILKLTKCRITLPTNVASMGLSFLKSVFLDQV-YLS 192
++T P L G + +LKL ++L + LK++ L+ V +L
Sbjct: 110 EHYKTEPCR----LPQSLFTCGTLTVLKLKN--VSLKDVQFPVCFKLLKTLHLEYVIFLD 163
Query: 193 DEMVSNLISGCVNLVFLGLEYCYGMKDVKICSLKITVLHLNYFTCEDGS---LEISCPNL 249
E L+S C L L + S + V L F GS L ++ P+L
Sbjct: 164 KETPQKLLSSCPILEVFDLTR-DDDDVDNVMSFSVMVPSLQRFIYCGGSGAELVMNTPSL 222
Query: 250 VSLEMIGFHVEKYDFKNLSGLVEAGV 275
L++ G E NL +VEA V
Sbjct: 223 KYLKLSGCGYECM-IGNLPEIVEAHV 247
>AT5G56370.1 | Symbols: | F-box family protein |
chr5:22836200-22837619 REVERSE
Length = 421
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 119/266 (44%), Gaps = 27/266 (10%)
Query: 16 SLNDLPEEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLSSLNFPYSSVSTATSIPARSL 75
S++ LP++ L ILS L TK + TS+L ++WRYLW + L YS + +
Sbjct: 3 SISLLPDDFLLRILSLLPTKDVLNTSVLSKRWRYLWKLVPKLQ--YSLIDKNAD--HGTF 58
Query: 76 ADFINQTLIRRPSTSPPLQKFHLQFDFKEHLYSSHVDS--WVRYAILHHVQQLELDFYIS 133
F++++L+ S +P L+ HL+ + S VD WVR A+ + +L+ D+
Sbjct: 59 VRFVDRSLLL--SMAPVLESLHLKLGRQ----CSEVDIGFWVRIAVEKGLCELDFDY--- 109
Query: 134 REFQTSDIESDYDFPFFLLKNGNVKILKLTKCRITLPTNVASMGLSFLKSVFLDQV-YLS 192
++T P L G + +LKL ++L + LK++ L+ V +L
Sbjct: 110 EHYKTEPCR----LPQSLFTCGTLTVLKLKN--VSLKDVQFPVCFKLLKTLHLEYVIFLD 163
Query: 193 DEMVSNLISGCVNLVFLGLEYCYGMKDVKICSLKITVLHLNYFTCEDGS---LEISCPNL 249
E L+S C L L + S + V L F GS L ++ P+L
Sbjct: 164 KETPQKLLSSCPILEVFDLTR-DDDDVDNVMSFSVMVPSLQRFIYCGGSGAELVMNTPSL 222
Query: 250 VSLEMIGFHVEKYDFKNLSGLVEAGV 275
L++ G E NL +VEA V
Sbjct: 223 KYLKLSGCGYECM-IGNLPEIVEAHV 247
>AT5G56690.1 | Symbols: | F-box family protein |
chr5:22939723-22941099 FORWARD
Length = 402
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 126/272 (46%), Gaps = 28/272 (10%)
Query: 17 LNDLPEEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLSSLNF-PYSSVSTA-TSIPA-R 73
++ LP+++L IL+FL TK AI TS+L ++WR+LW L L + Y ++ S+ A +
Sbjct: 4 ISGLPDDLLVKILAFLPTKVAISTSVLSKQWRFLWMWLPKLKYDDYDDITDGFNSVSAFQ 63
Query: 74 SLADFINQTL-IRRPSTSPPLQKFHLQFDFKEHLYSSHVDSWVRYAILHHVQQLELDFYI 132
+ DFI + L + R +P ++ L F L + SWV A+ V++L + Y
Sbjct: 64 TYRDFIAKNLPLHR---APIIESLSLGFRCG-TLQPEDLKSWVEVAVSRSVRELSILAYY 119
Query: 133 SREFQTSDIESDYDFPFFLLKNGNVKILKLTKCRITLPTNVASMGLSFLKSVFLDQV-YL 191
+ S L ++ LK R+ +P V L L+++ L +V YL
Sbjct: 120 RNNYALSSSS--------LYTCKSLVTLKGFNIRVDVPPTVCL--LPSLRTLELKRVRYL 169
Query: 192 SDEMVSNLISGCVNLVFLGLEY-----CYGMKDVKICSLKITVLHLNYFTCEDGSLEISC 246
+++ + L+S C L +L +E G+ V + SL+ L +Y C I
Sbjct: 170 NEDSLRMLLSFCPVLEYLSIERHDNDNLRGLV-VDVPSLRRLSLT-SYTGCSSDDYVIVT 227
Query: 247 PNLVSLEMIGFHVE--KYDFKNLSGLVEAGVA 276
P+L + + E Y + + L EA ++
Sbjct: 228 PSLKYFKAFDYRSEISSYKIEKIPELEEADIS 259
>AT2G42730.1 | Symbols: | F-box family protein |
chr2:17787454-17791218 REVERSE
Length = 737
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 127/273 (46%), Gaps = 36/273 (13%)
Query: 17 LNDLPEEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLSSLNFPYSSVSTATSIPA---- 72
++ LP+E+L ILS +STK A+ TS+L ++W+ ++ +S+L+ + S+P
Sbjct: 7 ISRLPDEVLGRILSLISTKEAVSTSVLSKRWKNMFVLVSNLD-----IDDRQSVPKTKQN 61
Query: 73 -----RSLADFINQTLIRRPSTSPPLQKFHLQFDFKEHLYSSHVDSWVRYAILHHVQQLE 127
R+ F+++ L + +S + SS + SW+ + H V ++
Sbjct: 62 RIEIHRNYMAFVDKLLDTQRGSSIKKLTLKSHVGVRGGTDSSRIQSWICNVLDHGV--MD 119
Query: 128 LDFYISREFQTSDIESDYDFPFFLLKNGNVKILKLTKC-RITLPTNVASMGLSFLKSVFL 186
LD +I+ + ++ + P + K+ + L++ + I L +V+ L L+++ L
Sbjct: 120 LDVFITLKGKSPPV------PAMIFKSKTLVKLRVGRGFTIKLSQDVS---LPLLRTLCL 170
Query: 187 DQVYL--SDEMVSNLISGCVNLVFLGLEYCYGMK-DVKICSLKITVLHLNY---FTCEDG 240
D V +V LIS C L L +E + + S + LH+ + FT
Sbjct: 171 DSVNFVGGHNVVGTLISRCPVLEELVVEERRCVDWTCSVSSPSLKRLHIRFDRKFT---- 226
Query: 241 SLEISCPNLVSLEMIGFHVEKYDFKNLSGLVEA 273
S+ + PNL+ + G+ + KY L L+EA
Sbjct: 227 SISLDAPNLIYYKHSGYVLGKYPNVKLDSLIEA 259
>AT4G26340.1 | Symbols: | F-box family protein |
chr4:13324130-13325559 FORWARD
Length = 419
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 143/293 (48%), Gaps = 30/293 (10%)
Query: 17 LNDLPEEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLSSLNFPYSSVSTATSIPARSLA 76
++ L +++L ILSF+ K + TSLL ++W+ LW +S L + S T +S +
Sbjct: 4 ISQLSDDLLLQILSFIPGKDVVATSLLSKRWQSLWMLVSELEYD-DSYHTGD---YKSFS 59
Query: 77 DFINQTLIRRPSTSPPLQKFHLQFDFKEHLYSSHVDSWVRYAILHHVQQLELDFYISREF 136
F+ ++L+ S + P+ K HL + + + W+ +A+ ++QL+++
Sbjct: 60 QFVYRSLL---SNNAPVIK-HLHLNLGPDCPAIDIGLWIGFALTRRLRQLKIN------I 109
Query: 137 QTSDIESDYDFPFFLLKNGNVKILKLTK-CRITLPTNVASMGLSFLKSVFLDQV-YLSDE 194
+TS ++ + P L + ++ L+L + +P++V L LK + L V Y D
Sbjct: 110 RTSSNDASFSLPSSLYTSDTLETLRLINFVLLDVPSSVC---LPSLKVLHLKTVDYEDDA 166
Query: 195 MVSNLISGCVNLVFLGLEYCYGMKDVKICSL-----KITVLHLNYFTCEDGSLEISCPNL 249
+ +L+ GC NL L +E ++ + + +++++ NY C+ +++ P+L
Sbjct: 167 SLPSLLFGCPNLEELFVERHDQDLEMDVTFVVPSLRRLSMIDKNYGQCDRYVIDV--PSL 224
Query: 250 VSLEMIGFHVEKYDFKNLSGLVEAGVAFLHMWKYYRHWSQVMRFLLHVKRLTV 302
L + V YD + + + E A + + + H + +R L V++L++
Sbjct: 225 KYLNITDDAV--YDVRQIENMPELVEAHVDITQGVTH--KFLRALTSVRQLSL 273
>AT1G52650.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s:
Cyclin-like F-box (InterPro:IPR001810), FBD-like
(InterPro:IPR006566); BEST Arabidopsis thaliana protein
match is: F-box family protein (TAIR:AT4G13960.1); Has
1151 Blast hits to 1117 proteins in 9 species: Archae -
0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 1150;
Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
| chr1:19610643-19612417 FORWARD
Length = 507
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 121/281 (43%), Gaps = 40/281 (14%)
Query: 13 VDHSLNDLPEEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLSSLNF-------PYSSVS 65
+DH ++ LPE +L +I SFL+TK A TS+LC++WR L + +L P
Sbjct: 43 MDH-VSSLPEGVLCNIFSFLTTKEAALTSILCKRWRNLLAFVPNLVIDDSVFLHPEEGKE 101
Query: 66 TATSIPARSLADFINQTLIRRPSTSPPLQKFHLQF--DFKEHLYSSHVDSWVRYAILHHV 123
I +S +F+++ L + ++ P++KF L+F DF H V++W+ + V
Sbjct: 102 ERYEI-QQSFMEFVDRVLALQGNS--PIKKFSLKFRTDFASH----RVNAWISNVLARGV 154
Query: 124 QQLELDFYISREFQTSDIESDYDFPFFLL-----KNGNVKILKLTKCRITLPTNVASMGL 178
+L++ + Y F L K+ N+ LK+ I + L
Sbjct: 155 SELDVLVIL------------YGAEFLPLSPKCFKSRNLVTLKINSLGIDWLA--GDIFL 200
Query: 179 SFLKSVFLDQVYLS-DEMVSNLISGCVNLVFLGLEYCYGMKDVKICSLKITVLHLNYFTC 237
LK++ L V L D+ + LV + + V S+K + NY+
Sbjct: 201 PMLKTLVLHSVKLCVDKFFFRALPALEELVLFAVSWRDRDVTVSNASIKTLTIKFNYYL- 259
Query: 238 EDGSLEISCPNLVSLEMIGFHVEKYDFKNLSGLVEAGVAFL 278
G+L + P+LVS + Y + L EA ++ L
Sbjct: 260 --GTLSLDTPSLVSFCFSDHVAKDYPLAKMEKLSEARISLL 298
>AT4G03220.1 | Symbols: | F-box family protein |
chr4:1417472-1419148 FORWARD
Length = 498
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 108/230 (46%), Gaps = 38/230 (16%)
Query: 7 ATVFSAVDHSLNDLPEEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLSSLNF-PYSSVS 65
A F VD +++LP+ + IL L KSA Q SLL ++WR L+ L L+F + +
Sbjct: 17 ANWFIRVDR-ISNLPDSLNHQILLLLPLKSAAQASLLSKRWRSLFLSLPDLDFTSINDLK 75
Query: 66 TATSIPARSLADFINQTLIRRPSTSPPLQKFHLQFDFKEHLYSSHVDSWVRYAILHHVQQ 125
S + S+ ++ +R S L+ F+ + + ++S +R A+ H VQ
Sbjct: 76 NPKSFSSNSIYKVLS---LRSHRDSNNLRSLR----FRVPVTFTSLNSLIRLAVTHQVQD 128
Query: 126 LELDFYISREFQTSDIESDYDFPFFLLKNGNVKILKLTKCRITL---PTNVASMGLSFLK 182
L++ E T D ++FP +++ + N++ L L + P++ A G L
Sbjct: 129 LDI------EVTTKDY---FNFPRWIVTSQNLRALTLKSANLGFRLPPSSSARGGFQKLT 179
Query: 183 SVFLDQVYLSDEMVSNLISGCVNLVF----------LGLEYCYGMKDVKI 222
S+ L +V L ++ C++ F L LE C+G+K++K+
Sbjct: 180 SLSLSRVILHNQ-------PCLSDFFTDPSFPLLEKLTLECCFGLKELKV 222
>AT1G56610.1 | Symbols: | syntaxin-related family protein |
chr1:21212189-21213960 FORWARD
Length = 535
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 120/278 (43%), Gaps = 37/278 (13%)
Query: 16 SLNDLPEEILTHILSFLSTKSAIQTSLLCRK--WRYLWCQLSSLNFPYSSVSTATSIPAR 73
L DLP+ + HILS+L TK+A+ SLL K WR LSSL F +S
Sbjct: 74 ELCDLPKCLAPHILSWLPTKTAVTVSLLFMKGWWRSEMKNLSSLKFSFSDDQE-----EE 128
Query: 74 SLADFINQTLIRRPSTSPPLQKFHLQFDFKEHLYSSHVDSWVRYAILHHVQQLELDFYIS 133
F++Q L +R + L F L + + + V V Y + + V++L+L Y
Sbjct: 129 HFVRFVDQVLRQRGNRK--LDSFSLTLN--DEIDGGFVTHLVDYPLDNGVEKLKLSIY-- 182
Query: 134 REFQTSDIESDYDFPFFLLKNGNVKILKLTKCRITLPTN---VASMGLSFLKSVFLDQVY 190
DI+ ++ + + LKL R + N VA+ L LK+++LD V
Sbjct: 183 ------DIKGNFQLSSRVFSQATLVTLKLATNRSLIWINGDDVAAAHLPCLKTLWLDDVL 236
Query: 191 LSD-EMVSNLISGC--------VNLVFLGLEYCYGMKDVKICSLKIT----VLHLNYFTC 237
++D ++ L+S C +++ + E C+ + + LKI V Y C
Sbjct: 237 VADVKVFVRLLSRCPILEELVMIDMKWHNWEACF-VVSASLRRLKIVWTDYVEMDEYDRC 295
Query: 238 EDGSLEISCPNLVSLEMIGFHVEKYDFKNLSGLVEAGV 275
L PN++ LE +Y S L+EA +
Sbjct: 296 PQSVL-FDTPNVLYLEYTDHIAGQYPLLKFSSLIEAKI 332
>AT1G56610.2 | Symbols: | syntaxin-related family protein |
chr1:21212378-21213960 FORWARD
Length = 472
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 119/278 (42%), Gaps = 37/278 (13%)
Query: 16 SLNDLPEEILTHILSFLSTKSAIQTSLLCRK--WRYLWCQLSSLNFPYSSVSTATSIPAR 73
L DLP+ + HILS+L TK+A+ SLL K WR LSSL F +S
Sbjct: 11 ELCDLPKCLAPHILSWLPTKTAVTVSLLFMKGWWRSEMKNLSSLKFSFSD-----DQEEE 65
Query: 74 SLADFINQTLIRRPSTSPPLQKFHLQFDFKEHLYSSHVDSWVRYAILHHVQQLELDFYIS 133
F++Q L +R + L F L + + + V V Y + + V++L+L Y
Sbjct: 66 HFVRFVDQVLRQRGNRK--LDSFSLTLN--DEIDGGFVTHLVDYPLDNGVEKLKLSIY-- 119
Query: 134 REFQTSDIESDYDFPFFLLKNGNVKILKLTKCRITLPTN---VASMGLSFLKSVFLDQVY 190
DI+ ++ + + LKL R + N VA+ L LK+++LD V
Sbjct: 120 ------DIKGNFQLSSRVFSQATLVTLKLATNRSLIWINGDDVAAAHLPCLKTLWLDDVL 173
Query: 191 LSDEMV-SNLISGC--------VNLVFLGLEYCYGMKDVKICSLKIT----VLHLNYFTC 237
++D V L+S C +++ + E C+ + + LKI V Y C
Sbjct: 174 VADVKVFVRLLSRCPILEELVMIDMKWHNWEACF-VVSASLRRLKIVWTDYVEMDEYDRC 232
Query: 238 EDGSLEISCPNLVSLEMIGFHVEKYDFKNLSGLVEAGV 275
L PN++ LE +Y S L+EA +
Sbjct: 233 PQSVL-FDTPNVLYLEYTDHIAGQYPLLKFSSLIEAKI 269
>AT5G35995.2 | Symbols: | F-box family protein |
chr5:14136707-14138230 REVERSE
Length = 455
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 120/284 (42%), Gaps = 43/284 (15%)
Query: 17 LNDLPEEIL-THILSFLSTKSAIQTSLLCRKWRYLWCQLSSLNFPYSSVSTATSIPAR-- 73
++ LP+E+L ILS L TK + TS+L ++WR L+ + S + S P R
Sbjct: 7 ISSLPDEVLGKKILSLLPTKLVVSTSVLSKRWRNLFHFVDSFDL-------EDSTPIRNA 59
Query: 74 -SLADFINQTLIRRPSTSPPLQKFHLQFDFKEHLYSSHVDSWVRYAILHHVQQLELDFYI 132
S +DF+ T+ ++ P+++ L H S V+ W+R A+ +L L
Sbjct: 60 DSFSDFMKDTVALL--SNCPIKRLTLN----SHYEKSSVNRWIRSALKRGCLELNLQ--- 110
Query: 133 SREFQTSDIESDYDFPFFLLKNGNVKILKLTKCRITLPTNVASMGLSF---LKSVFLDQV 189
S + D F N VK L L+ R L NV G F LK++ L V
Sbjct: 111 ------SQYDHYLDIGIFFRNNTLVK-LTLSSYRTFLRGNVPPEGRVFFPALKTLSLGAV 163
Query: 190 YLSDEMVSNLISGCVNL-------VFLGLEYCYGMKDVKICSLK--ITVLHL--NYFTCE 238
+ + LISGC L V G + + V S+K V H N + E
Sbjct: 164 VAKPALYNWLISGCPVLEELFILDVGSGDDQPTWTRSVVSASIKRLTIVFHFPHNTYPYE 223
Query: 239 DGSLEISCPNLVSLEMIGFHVEKYDFKNLSGLVEAGVAFLHMWK 282
D +EI PNL L+ + D L L EA + L +W+
Sbjct: 224 D-DVEIKTPNLEFLDYSALRSDGSDVDYLDSLAEARLD-LRLWE 265
>AT5G35995.1 | Symbols: | F-box family protein |
chr5:14136707-14138230 REVERSE
Length = 455
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 120/284 (42%), Gaps = 43/284 (15%)
Query: 17 LNDLPEEIL-THILSFLSTKSAIQTSLLCRKWRYLWCQLSSLNFPYSSVSTATSIPAR-- 73
++ LP+E+L ILS L TK + TS+L ++WR L+ + S + S P R
Sbjct: 7 ISSLPDEVLGKKILSLLPTKLVVSTSVLSKRWRNLFHFVDSFDL-------EDSTPIRNA 59
Query: 74 -SLADFINQTLIRRPSTSPPLQKFHLQFDFKEHLYSSHVDSWVRYAILHHVQQLELDFYI 132
S +DF+ T+ ++ P+++ L H S V+ W+R A+ +L L
Sbjct: 60 DSFSDFMKDTVALL--SNCPIKRLTLN----SHYEKSSVNRWIRSALKRGCLELNLQ--- 110
Query: 133 SREFQTSDIESDYDFPFFLLKNGNVKILKLTKCRITLPTNVASMGLSF---LKSVFLDQV 189
S + D F N VK L L+ R L NV G F LK++ L V
Sbjct: 111 ------SQYDHYLDIGIFFRNNTLVK-LTLSSYRTFLRGNVPPEGRVFFPALKTLSLGAV 163
Query: 190 YLSDEMVSNLISGCVNL-------VFLGLEYCYGMKDVKICSLK--ITVLHL--NYFTCE 238
+ + LISGC L V G + + V S+K V H N + E
Sbjct: 164 VAKPALYNWLISGCPVLEELFILDVGSGDDQPTWTRSVVSASIKRLTIVFHFPHNTYPYE 223
Query: 239 DGSLEISCPNLVSLEMIGFHVEKYDFKNLSGLVEAGVAFLHMWK 282
D +EI PNL L+ + D L L EA + L +W+
Sbjct: 224 D-DVEIKTPNLEFLDYSALRSDGSDVDYLDSLAEARLD-LRLWE 265
>AT5G44950.1 | Symbols: | F-box family protein |
chr5:18151665-18153164 FORWARD
Length = 438
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 111/265 (41%), Gaps = 28/265 (10%)
Query: 17 LNDLPEEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLSSLNFPYSSVSTATSIPARSLA 76
+++LP+ +L HIL +L + +I+TS+L +WR LW ++ L+ ++ +
Sbjct: 6 ISELPDGLLNHILMYLHIEESIRTSVLSSRWRKLWLKVPGLDVNVHDFPADGNLFESLMD 65
Query: 77 DFINQTLIRRPSTSPPLQKFHLQFDFKEHLYSSHVDSWVRYAILHHVQQLELDFYISREF 136
F+ R LQ F L ++ + W+ + +Q L++
Sbjct: 66 KFLEVNRGR-------LQNFKLNYESNLYYLMDRFVPWIATVVDRGIQHLDV-------- 110
Query: 137 QTSDIES-DYDF-PFFLLKNGNVKILKLTKCRITLPTNVASMGLSFLKSVFLDQVYLSDE 194
+D DF P + K+ + LKL + P V S L LK + L+ ++ S
Sbjct: 111 TATDCPPWTIDFMPANICKSKTLVSLKLVNVGLDTPKFVVS--LPCLKIMHLEDIFYSPL 168
Query: 195 MVSNLISGCVNLVFLGLEYCYGMKD----VKICSLKITVLHLNY---FTCEDGSLEISCP 247
+ NLISGC V L +D +++ S + L + D S+EI P
Sbjct: 169 IAENLISGCP--VLEDLTIVRNHEDFLNFLRVMSQTLKNFRLTFDWGMGSNDFSVEIDAP 226
Query: 248 NLVSLEMIGFHVEKYDFKNLSGLVE 272
L + ++ KNLS LV+
Sbjct: 227 GLKYMSFRDSQSDRIVVKNLSSLVK 251
>AT5G38590.2 | Symbols: | F-box family protein |
chr5:15452066-15453455 REVERSE
Length = 410
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 128/266 (48%), Gaps = 25/266 (9%)
Query: 17 LNDLPEEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLSSLNFPYSSVSTATSIPARSLA 76
+N LP+++L ILS++ T A+ TS+L ++W +LW L +L++ + L
Sbjct: 4 INGLPDDLLVKILSYVPTDIAVSTSILSKRWEFLWMWLPNLDYTSRWCRKPGDV---GLR 60
Query: 77 DFINQTLIRRPSTSPPLQKFHLQFDFKEHLYSSHVDSWVRYAILHHVQQLELDFYISREF 136
DFI++ L + +FH + + W+ A+ HV L++D +
Sbjct: 61 DFIHKNLPLHRAPVIESLRFHSN---SPDIKPEDIRRWIEIAVSRHVHDLDIDHF----- 112
Query: 137 QTSDIESDYDFPFFLLKNGNVKILKLTKCRITLPTNVASMGLSFLKSVFLDQV-YLSDEM 195
S+ E+ + FF K ++ LKL +TL + + L LK++ LD V ++ +
Sbjct: 113 --SENENIFLSSFFACK--SLVTLKLRS--VTLRDIPSMVCLPSLKTLLLDNVSFVEGKS 166
Query: 196 VSNLISGCVNLVFLGLEYCYGMKDVKICSLKI-TVLHLNYFTCEDGSLE---ISCPNLVS 251
+ L+S C L L + YC ++ K ++ + ++L L+ + ++ L+ I P+L
Sbjct: 167 LQELLSICPVLEDLSV-YCDDYENTKELTIVVPSLLSLSLYIPDEWLLDGYWIDTPSLEY 225
Query: 252 LEMIGFHVEKY--DFKNLSGLVEAGV 275
L++ ++ + KN+ L EA V
Sbjct: 226 LKLEDWNSCDHLSLIKNMPKLREAYV 251
>AT3G56780.1 | Symbols: | F-box family protein |
chr3:21031613-21033202 FORWARD
Length = 431
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 91/191 (47%), Gaps = 26/191 (13%)
Query: 17 LNDLPEEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLSSLNFPYSSVSTATSIPARSLA 76
+N+LP++++ ILSF+STK + TSLL +KW+ LW ++ L + + +SL
Sbjct: 9 INELPDDLILKILSFVSTKHVVVTSLLSKKWKSLWTRVPILKYDVRDHTRFERFLDKSL- 67
Query: 77 DFINQTLIRRPSTSPPLQKFHLQFDFKEHLYSSHVDSWVRYAILH---HVQQLELDFYIS 133
F +Q+ + L+ H++ L++ + W+R A+ H H+++LE+D I
Sbjct: 68 -FSHQSHV--------LESLHVELSVT--LWNKDIGPWIRTALHHHHCHLRELEIDACIV 116
Query: 134 REFQTSDIESDYDFPFFLLKNGNVKILKLTKCRITLPTNVASMGLSFLKSVFLDQVYLSD 193
P L + +LKL I + + ++ L LK++ +D L D
Sbjct: 117 HTV----------LPPELFTCKTLVVLKLKGIVIDVEAPLTTVSLPSLKTLHIDHSSLFD 166
Query: 194 -EMVSNLISGC 203
+ L+S C
Sbjct: 167 FGSLQMLLSNC 177
>AT5G60610.1 | Symbols: | F-box family protein |
chr5:24364049-24365386 FORWARD
Length = 388
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 137/303 (45%), Gaps = 50/303 (16%)
Query: 17 LNDLPEEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLSSLNFPYSSVSTATSIPARSLA 76
++ LP+E+L I+SF+ TK A+ TS+L ++W LW + L + PA L
Sbjct: 4 ISGLPDELLVKIISFVPTKVAVSTSILSKRWESLWKWVPKLECDCTE-------PA--LR 54
Query: 77 DFINQTLIRRPSTSPPLQKFHLQFDFKEHLYSSHVDSWVRYAILHHVQQLELDFYISREF 136
DFI + L P + ++ +L+F + L+ + W AI H +++L +DF+
Sbjct: 55 DFILKNL---PLQARIIESLYLRFRRESFLF-QDIKLWGGIAISHCLRELRIDFF----- 105
Query: 137 QTSDIESDYDFPFFLLKNG--------NVKILKLTKCRITLPTNVASMGLSFLKSVFLDQ 188
S Y P+ +L +K+L L R+ +P +V L LK++ L
Sbjct: 106 ------SHYANPYVILPRSLYTCKSLVTLKLLGLG-IRVDVPRDVC---LPSLKTLLLQC 155
Query: 189 VYLSDE-MVSNLISGCVNLVFLGLEYCYGMKDVKICSLKITVLHLNYFTCEDGSLEISCP 247
V S+E + L+S C L L +E ++VK + + L C + SC
Sbjct: 156 VAYSEEDPLRLLLSCCPVLEDLVIELDDANQNVKALVVIVPTLQ-----CLSLKIPASCS 210
Query: 248 N----LVSLEMIGFHVEKYDFKNLSGLVEAGVAFLHMWKYY--RHWSQVMRFLLHVKRLT 301
+ +V+ + F VE D + + L+E + L Y +H ++ + VKRLT
Sbjct: 211 DERYLIVTPSLKYFKVED-DREIFNALIE-NMPELEEADIYVTQHIETLLESVTSVKRLT 268
Query: 302 VQN 304
++
Sbjct: 269 LRQ 271
>AT1G49610.1 | Symbols: | F-box family protein |
chr1:18361679-18363192 REVERSE
Length = 354
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 82/165 (49%), Gaps = 24/165 (14%)
Query: 16 SLNDLPEEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLSSLNFPYSSVSTATSIPARSL 75
S++ LP+ IL LS + TK AI+TS+L ++WR++W + SL+F +
Sbjct: 27 SISSLPDVILQENLSLIPTKFAIRTSVLSKRWRHVWSETPSLDFDDC---------YKLD 77
Query: 76 ADFINQTLIRRPSTSPPLQKFHLQFDFKEHLYSSHVDSWVRYAILHHVQQLELDFYISRE 135
DFI++TL + + F L +L ++D W+++A+ +V+ L L F +
Sbjct: 78 VDFIDKTLALYRARK--IMTFDLWITNGINL--PYIDGWIKFAMSRNVENLFLSF----D 129
Query: 136 FQTSDIESDYDFPFFLLKNGNVKILKLTKCRITLPTNVASMGLSF 180
F+ YD P +L N +VK L + K P + S+ L F
Sbjct: 130 FRL------YDVPDYLYINSSVKQLSIAKILSGCPI-IESLTLHF 167
>AT3G44060.1 | Symbols: | F-box family protein |
chr3:15824938-15826391 REVERSE
Length = 427
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 97/216 (44%), Gaps = 19/216 (8%)
Query: 20 LPEEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLSSLNFPYSSVSTATSIPARSLADFI 79
LP+++L IL L TK A+ TS+L ++WR L+ + +L+F + +S +S DF+
Sbjct: 4 LPDDLLVQILYLLPTKEAVSTSVLSKRWRTLFTRSDNLDF-HDPISGRPEDILKSFNDFV 62
Query: 80 NQTLIRRPSTSPPLQKFHLQFDFKEHLYSSHV-DSWVRYAILHHVQQLELDFYISREFQT 138
+ +L + ++KF L K Y HV D W+ A+ H V +L L
Sbjct: 63 DSSLAFQGGKH--IKKFSLHTKIKTFEY--HVLDRWICNALEHGVSELHL------HLMH 112
Query: 139 SDIESDYDFPFFLLKNGNVKILKLTKCRITLPTNVASMGLSFLKSVFLDQVYLSDEMVSN 198
+ P + + + L L R+ P+ L LK + LD + D+ +SN
Sbjct: 113 ESWPWLFSIPSKVFNSSTLVKLSLGS-RLYCPSFPPDTSLPALKVLLLDSILFRDDQLSN 171
Query: 199 L-ISGCVNLVFLGLEYCY-----GMKDVKICSLKIT 228
+ ++ C L L + + Y K +K SL +
Sbjct: 172 VFLAACPALEDLTIHHTYHPCVISSKSIKKLSLSVN 207
>AT5G38590.1 | Symbols: | F-box family protein |
chr5:15452586-15453455 REVERSE
Length = 289
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 128/266 (48%), Gaps = 25/266 (9%)
Query: 17 LNDLPEEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLSSLNFPYSSVSTATSIPARSLA 76
+N LP+++L ILS++ T A+ TS+L ++W +LW L +L++ + L
Sbjct: 4 INGLPDDLLVKILSYVPTDIAVSTSILSKRWEFLWMWLPNLDYTSRWCRKPGDV---GLR 60
Query: 77 DFINQTLIRRPSTSPPLQKFHLQFDFKEHLYSSHVDSWVRYAILHHVQQLELDFYISREF 136
DFI++ L + +FH + + W+ A+ HV L++D +
Sbjct: 61 DFIHKNLPLHRAPVIESLRFHSN---SPDIKPEDIRRWIEIAVSRHVHDLDIDHF----- 112
Query: 137 QTSDIESDYDFPFFLLKNGNVKILKLTKCRITLPTNVASMGLSFLKSVFLDQV-YLSDEM 195
S+ E+ + FF K ++ LKL +TL + + L LK++ LD V ++ +
Sbjct: 113 --SENENIFLSSFFACK--SLVTLKLRS--VTLRDIPSMVCLPSLKTLLLDNVSFVEGKS 166
Query: 196 VSNLISGCVNLVFLGLEYCYGMKDVKICSLKI-TVLHLNYFTCEDGSLE---ISCPNLVS 251
+ L+S C L L + YC ++ K ++ + ++L L+ + ++ L+ I P+L
Sbjct: 167 LQELLSICPVLEDLSV-YCDDYENTKELTIVVPSLLSLSLYIPDEWLLDGYWIDTPSLEY 225
Query: 252 LEMIGFHVEKY--DFKNLSGLVEAGV 275
L++ ++ + KN+ L EA V
Sbjct: 226 LKLEDWNSCDHLSLIKNMPKLREAYV 251
>AT3G42770.1 | Symbols: | F-box family protein |
chr3:14867122-14870083 FORWARD
Length = 532
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 137/315 (43%), Gaps = 43/315 (13%)
Query: 17 LNDLPEEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLSSLNFPYSSVSTATSIP----- 71
+N LP+E+L ILSFL TK A TSLL ++WR L+ +L+F S + +
Sbjct: 1 MNCLPDELLVQILSFLPTKEATSTSLLSKRWRTLFTLSPNLDFDNSLLLQSKKRKWNMRN 60
Query: 72 -ARSLADFINQTLIRRPSTSPPLQKFHLQFDFKEHLYSSH----VDSWVRYAILHHVQQL 126
+S F++ TL + ++ F L+ FKE L + V+ W+ A+ H V +L
Sbjct: 61 IQKSFVGFVDSTLALQGGKG--IKSFSLK--FKETLGDVNGEVDVNRWICNALEHGVSEL 116
Query: 127 ELDF-YISREFQTSDIESDYDFPFFLLKNGNVKILKLT-KCRITLPTNVASMGLSFLKSV 184
L Y R S+I + + K++KL+ + P + L LK +
Sbjct: 117 HLRIDYTKRCHLPSEIFT------------STKLVKLSLVTQSCFPVVPNCISLPSLKVL 164
Query: 185 FLDQVYLSDEMVSNLISGCVNLVFL---------GLEYCYGMKDVKICSLKITVLHLNYF 235
FLD ++ ++ C L L G+ Y K +K S+ T YF
Sbjct: 165 FLDSIWFEVPQFLIFLTACPALEDLTIYQKPHSVGMPYHISSKTIKRLSVTYTC---GYF 221
Query: 236 TCEDGSLEI-SCPNLVSLEMIGFHVEKYDFKNLSGLVEAGVAFLHMWKYYRHWSQVMRFL 294
D L++ + P++V L + KY NL L +A + + + ++++ +
Sbjct: 222 V--DYGLKLFNTPSVVDLYYSDYVRHKYPHMNLDSLPKATLDIHFLDDNAANVTELLSGI 279
Query: 295 LHVKRLTVQNWWFKV 309
+VK L + + KV
Sbjct: 280 RNVKTLHLTSSTVKV 294
>AT5G56440.1 | Symbols: | F-box family protein |
chr5:22855742-22857117 REVERSE
Length = 430
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 116/273 (42%), Gaps = 33/273 (12%)
Query: 20 LPEEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLSSLNFPYSSVSTATSIPARSLADFI 79
LP++++ ILSF+ TK + T+LL ++WRYLW + L++ S+ A + F+
Sbjct: 7 LPDDVVFKILSFVPTKVVVSTNLLSKRWRYLWKHVPKLDYRDPSLVDTEHWRA---SRFV 63
Query: 80 NQTLIRRPSTSPPLQKFHLQFDFKEHLYSSHVDSWVRYAILHHVQQLELDFYISREFQTS 139
++ L+ +P L+ HL + S +++W+ AI V+ L + YI
Sbjct: 64 DKFLLLH--EAPVLETLHLSLS--RNCPPSDIETWISVAISRRVRNLHIYRYIPSTGPIR 119
Query: 140 DIESDYD----FPFFLLKNGNVKILKLTKCRITLPTNVASMGLSFLKSVFLDQVYLSDEM 195
S Y +LL + V C +L V L F K + SDE+
Sbjct: 120 LPRSLYTCETLVSLYLLLDFTVDDAPFMFCFRSLKVLV----LLFAK-------FSSDEI 168
Query: 196 VSNLISGCVNLVFLGLEYCYGMKDVKICSLKITVLH-LNYFTC------EDGSLEISCPN 248
V+ L+SGC V GL +VK ++ L L C +D I P+
Sbjct: 169 VNRLLSGCP--VLEGLILIRRNDNVKNFTIAAPSLQRLIAIDCRSQVPGDDVGFVIKAPS 226
Query: 249 LVSLEMIGF--HVEKYDFKNLSGLVEAGVAFLH 279
L SL ++ F H + LV+A + H
Sbjct: 227 LKSLTLLNFSPHSGFRSLVKMPDLVKASIKVRH 259
>AT1G06630.2 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Cyclin-like F-box
(InterPro:IPR001810), Leucine-rich repeat 2
(InterPro:IPR013101); BEST Arabidopsis thaliana protein
match is: F-box family protein (TAIR:AT3G60040.1). |
chr1:2028071-2029442 FORWARD
Length = 403
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 123/278 (44%), Gaps = 22/278 (7%)
Query: 5 NAATVFSAVDHSLNDLPEEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLSSLNFPYS-- 62
+A + + ++N LP+EIL ILS L+TK A+ TS+L +KWR L+ + +L F S
Sbjct: 2 DAKKLDTGPRDAINWLPDEILGKILSLLATKQAVSTSVLSKKWRTLFKLVDTLEFDDSVS 61
Query: 63 --SVSTATSIPARSLADFINQTLIRRPSTSPPLQKFHLQ--FDFKEHLYSSHVDSWVRYA 118
A+ + S D +++T+ + P++K L+ + + V W+
Sbjct: 62 GMGEQEASYVFPESFKDLVDRTVALQ--CDYPIRKLSLKCHVGRDDEQRKACVGRWISNV 119
Query: 119 ILHHVQQLELDFYISREFQTSDIESDYDFPFFLLKNGNVKILKLTKCRIT-LPTNVASMG 177
+ V ++ L + +D + P L VK+ T+ + LP+ V+
Sbjct: 120 VGRGVSEVVL--------RINDRGLHFLSPQLLTCKTLVKLTLGTRLFLGKLPSYVSLPS 171
Query: 178 LSFLKSVFLDQVYLSD--EMVSNLISGCVNLVFLGLEYCYGMKDVKICSLKITVLHLNYF 235
L FL F+ V+ D E+ + L++GC + L L I S + L ++Y
Sbjct: 172 LKFL---FIHSVFFDDFGELSNVLLAGCPVVEALYLNQNGESMPYTISSPTLKRLSVHYE 228
Query: 236 TCEDGSLEISCPNLVSLEMIGFHVEKYDFKNLSGLVEA 273
+ + PNL L+ + + Y NL LVEA
Sbjct: 229 YHFESVISFDLPNLEYLDYSDYALYGYPQVNLESLVEA 266
>AT5G22670.1 | Symbols: | F-box family protein |
chr5:7538192-7539685 REVERSE
Length = 443
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 115/251 (45%), Gaps = 33/251 (13%)
Query: 16 SLNDLPEEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLSSLNFPYSSVSTATSIPARSL 75
S++ LP+++L ILS L TK A++TS+L ++W+ + L F S AR +
Sbjct: 12 SISLLPDDLLCRILSNLPTKVAVRTSVLSKRWKRFSLSVPLLEFNVSEFHGYYEF-ARVV 70
Query: 76 ADFINQTLIRRPSTSPPLQKFHLQFDFKEHLYSSHVDSWVRYAILHHVQQLELD--FYIS 133
F++ S + K L F+ K+H S++ W+ A+ VQ L++ Y+
Sbjct: 71 HGFLDT------SRETCIHKLKLAFEKKQH-DRSYLTQWIHNAVKRKVQHLDIGRWSYLG 123
Query: 134 REFQTSDIESDYDFPFFLLKNGNVKILKLTKCRITLPTNVASMGLSFLKSVFL-DQVYLS 192
+E P L + L+L ++LP + + L LK++ L D +Y +
Sbjct: 124 QEL----------IPHSLYTCETLVSLRLHN--VSLP-DFDHVSLPRLKTMHLIDNIYPN 170
Query: 193 DEMVSNLISGCVNL----VFLGLEYCYGMKDVKICSLKITVLHLN---YFTCEDGSLE-- 243
D ++ NLIS C L V +E + V+ SLK +L L+ Y ED S E
Sbjct: 171 DALLENLISSCPVLEDLNVSRDVENIVKVLRVRSLSLKSLILALDGDRYGDIEDDSWEVV 230
Query: 244 ISCPNLVSLEM 254
I P L L +
Sbjct: 231 IDAPRLSYLSL 241
>AT1G06630.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Cyclin-like F-box
(InterPro:IPR001810), Leucine-rich repeat 2
(InterPro:IPR013101); BEST Arabidopsis thaliana protein
match is: F-box family protein (TAIR:AT3G60040.1). |
chr1:2028071-2030344 FORWARD
Length = 461
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 123/278 (44%), Gaps = 22/278 (7%)
Query: 5 NAATVFSAVDHSLNDLPEEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLSSLNFPYS-- 62
+A + + ++N LP+EIL ILS L+TK A+ TS+L +KWR L+ + +L F S
Sbjct: 2 DAKKLDTGPRDAINWLPDEILGKILSLLATKQAVSTSVLSKKWRTLFKLVDTLEFDDSVS 61
Query: 63 --SVSTATSIPARSLADFINQTLIRRPSTSPPLQKFHLQ--FDFKEHLYSSHVDSWVRYA 118
A+ + S D +++T+ + P++K L+ + + V W+
Sbjct: 62 GMGEQEASYVFPESFKDLVDRTVALQ--CDYPIRKLSLKCHVGRDDEQRKACVGRWISNV 119
Query: 119 ILHHVQQLELDFYISREFQTSDIESDYDFPFFLLKNGNVKILKLTKCRIT-LPTNVASMG 177
+ V ++ L + +D + P L VK+ T+ + LP+ V+
Sbjct: 120 VGRGVSEVVL--------RINDRGLHFLSPQLLTCKTLVKLTLGTRLFLGKLPSYVSLPS 171
Query: 178 LSFLKSVFLDQVYLSD--EMVSNLISGCVNLVFLGLEYCYGMKDVKICSLKITVLHLNYF 235
L FL F+ V+ D E+ + L++GC + L L I S + L ++Y
Sbjct: 172 LKFL---FIHSVFFDDFGELSNVLLAGCPVVEALYLNQNGESMPYTISSPTLKRLSVHYE 228
Query: 236 TCEDGSLEISCPNLVSLEMIGFHVEKYDFKNLSGLVEA 273
+ + PNL L+ + + Y NL LVEA
Sbjct: 229 YHFESVISFDLPNLEYLDYSDYALYGYPQVNLESLVEA 266
>AT3G03040.1 | Symbols: | F-box family protein | chr3:684685-686277
FORWARD
Length = 472
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 119/274 (43%), Gaps = 29/274 (10%)
Query: 17 LNDLPEEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLSSLNF-------PYSSVSTATS 69
L+ LP+E+ ILSFL+TK + TS+L +KWR L+ + +L+F P
Sbjct: 4 LSSLPDEVRCLILSFLTTKESASTSVLSKKWRNLFALVPNLDFDDSEFLHPEEGKRERDG 63
Query: 70 IPARSLADFINQTLIRRPSTSPPLQKFHLQFDFKEHLYSSHVDSWVRYAILHHVQQLELD 129
I +S DF+++ L + ++S ++KF L+ + + + V+ W+ + V ++L
Sbjct: 64 I-LQSFMDFVDRVLSLQGNSS--IRKFSLKCE--TGVPPARVNRWLCEVLQRDVSDIDL- 117
Query: 130 FYISREFQTSDIESDYDFPFFLLKNGNVKILKLTKC-RITLPTNVASMGLSFLKS--VFL 186
T D+ Y P L + + LKL I L LKS V+
Sbjct: 118 --------TIDLGYGYYLPEELFVSETLVNLKLKSAFNIDWWPGAEGTSLPMLKSLCVYG 169
Query: 187 DQVYLSDEMVSNLISGCV--NLVFLGLEYCYGMKDVKICSLKITVLHLNYFTCED-GSLE 243
+V+ DE+ L V L +++ D + S +T LH+ E+ S+
Sbjct: 170 VRVFCDDELQELLPCFPVLEELQMSNMQWLDS--DETVSSATLTTLHITGIRSENPKSIS 227
Query: 244 ISCPNLVSLEMIGFHVEKYDFKNLSGLVEAGVAF 277
PNL+S F E Y N+ L A +A
Sbjct: 228 FDTPNLLSFVYTDFVAEDYPLVNMKNLSLARLAL 261
>AT1G16930.1 | Symbols: | F-box family protein |
chr1:5789987-5791534 FORWARD
Length = 449
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 86/193 (44%), Gaps = 28/193 (14%)
Query: 17 LNDLPEEILTHILSFLSTKSAIQTSLLCRKWRYLW-----CQLSSLNFPYSSVSTATSIP 71
+++LP+ +L ILS LSTK ++ TS+L ++WR LW L S NFP V
Sbjct: 17 ISNLPDSLLCQILSDLSTKESVCTSVLSKRWRNLWLHVPVLDLDSNNFPDDDV------- 69
Query: 72 ARSLADFINQTLIRRPSTSPPLQKFHLQFDFKEHLYSSHVDSWVRYAILHHVQQLELDFY 131
F+N+ L L++F L ++ EH +S SW+ I V F
Sbjct: 70 ---FVSFVNRFL--GSENEQHLERFKLIYEVNEH-DASRFKSWINAVIKRRVCH----FN 119
Query: 132 ISREFQTSDIESDYDFPFFLLKNGNVKILKLTKCRITLPTNVASMGLSFLKSVFLDQV-Y 190
+ E D P L + L+L + + P +V+ L +K + LD V Y
Sbjct: 120 VHNEVDDDD--ELVKMPLSLYSCERLVNLQLYRVALDHPESVS---LPCVKIMHLDMVKY 174
Query: 191 LSDEMVSNLISGC 203
+D + LISGC
Sbjct: 175 DADSTLEILISGC 187
>AT5G56400.1 | Symbols: | F-box family protein |
chr5:22846069-22847615 REVERSE
Length = 455
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 129/306 (42%), Gaps = 45/306 (14%)
Query: 17 LNDLPEEILTHILSFL-STKSAIQTSLLCRKWRYLWCQLSSLNFPYSSVSTATSIPARSL 75
++DLPE++L HILS L +T + TS + ++W LW ++ L F + S
Sbjct: 35 ISDLPEDLLVHILSLLPTTNDIVATSGVSKRWESLWTKVHKLRF---NDRIYDGKRYDSF 91
Query: 76 ADFINQTLIRRPSTSPPLQKFHLQFDFKEHLYSSHVDSWVRYAILHHVQQLELDFY---- 131
F+ ++LI +P L L K + + W++ A+ ++ +L + Y
Sbjct: 92 LHFVEKSLILH--KAPTLVSLRLSVGPK--CTADDIGLWIKLALDRNICELIIKHYPDHG 147
Query: 132 ---ISREFQTSDIESDYDFPFFLLKNGNVKILKLTKCRITLPTNVASMGLSFLKSVFLDQ 188
+SR S LKN + + L C I+L T + L ++K
Sbjct: 148 HIRLSRRLCDSKT-----LVSLKLKNAILGAIWLPTCFISLKT----LHLRYVK------ 192
Query: 189 VYLSDEMVSNLISGCVNLVFLGLEYCYGMKDVKICSLKITVLHLNYFT---------CED 239
Y DE V LIS C +L L ++ + +VK I V +L T +
Sbjct: 193 -YSGDESVRTLISSCPSLRNLVVKR-HNEDNVK--RFAIIVRYLQSLTVYLSPLHGVADS 248
Query: 240 GSLEISCPNLVSLEMIGFHVEKYDFKNLSGLVEAG--VAFLHMWKYYRHWSQVMRFLLHV 297
+ I+ PNL L + + + F+++ L EA VAF H ++ + V + L +
Sbjct: 249 DAYVINTPNLKYLNIKDHYTDLCSFEDMPYLDEANLDVAFTHTENFFESLTSVKKLSLCL 308
Query: 298 KRLTVQ 303
K+ Q
Sbjct: 309 KKSNAQ 314
>AT1G06630.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Cyclin-like F-box
(InterPro:IPR001810), Leucine-rich repeat 2
(InterPro:IPR013101); BEST Arabidopsis thaliana protein
match is: F-box family protein (TAIR:AT3G60040.1); Has
1188 Blast hits to 1155 proteins in 9 species: Archae -
0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1187;
Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
| chr1:2028071-2031173 FORWARD
Length = 477
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 123/278 (44%), Gaps = 22/278 (7%)
Query: 5 NAATVFSAVDHSLNDLPEEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLSSLNFPYS-- 62
+A + + ++N LP+EIL ILS L+TK A+ TS+L +KWR L+ + +L F S
Sbjct: 2 DAKKLDTGPRDAINWLPDEILGKILSLLATKQAVSTSVLSKKWRTLFKLVDTLEFDDSVS 61
Query: 63 --SVSTATSIPARSLADFINQTLIRRPSTSPPLQKFHLQ--FDFKEHLYSSHVDSWVRYA 118
A+ + S D +++T+ + P++K L+ + + V W+
Sbjct: 62 GMGEQEASYVFPESFKDLVDRTVALQ--CDYPIRKLSLKCHVGRDDEQRKACVGRWISNV 119
Query: 119 ILHHVQQLELDFYISREFQTSDIESDYDFPFFLLKNGNVKILKLTKCRIT-LPTNVASMG 177
+ V ++ L + +D + P L VK+ T+ + LP+ V+
Sbjct: 120 VGRGVSEVVL--------RINDRGLHFLSPQLLTCKTLVKLTLGTRLFLGKLPSYVSLPS 171
Query: 178 LSFLKSVFLDQVYLSD--EMVSNLISGCVNLVFLGLEYCYGMKDVKICSLKITVLHLNYF 235
L FL F+ V+ D E+ + L++GC + L L I S + L ++Y
Sbjct: 172 LKFL---FIHSVFFDDFGELSNVLLAGCPVVEALYLNQNGESMPYTISSPTLKRLSVHYE 228
Query: 236 TCEDGSLEISCPNLVSLEMIGFHVEKYDFKNLSGLVEA 273
+ + PNL L+ + + Y NL LVEA
Sbjct: 229 YHFESVISFDLPNLEYLDYSDYALYGYPQVNLESLVEA 266
>AT4G10400.2 | Symbols: | F-box family protein |
chr4:6446335-6447715 REVERSE
Length = 409
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 118/262 (45%), Gaps = 22/262 (8%)
Query: 17 LNDLPEEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLSSLNFPYSSVSTATSIPARSLA 76
++ LP+E+L ILSF+ TK A+ TS+L ++W +LW L+ L F S + + L
Sbjct: 4 ISGLPDEVLVKILSFVPTKVAVSTSILSKRWEFLWMWLTKLKFGSKRYSESE---FKRLQ 60
Query: 77 DFINQTL-IRRPSTSPPLQKFHLQFDFKEHLYSSHVDSWVRYAILHHVQQLELDFYISRE 135
F+++ L + R +P ++ F L H + WV A+ +++ EL Y S
Sbjct: 61 CFLDRNLPLHR---APVIESFRLVLS-DSHFKPEDIRMWVVVAVSRYIR--ELKIYSSHY 114
Query: 136 FQTSDIESDYDFPFFLLKNGNVKILKL-TKCRITLPTNVASMGLSFLKSVFLDQV-YLSD 193
+ +I P L ++ ILKL + +P V L LK++ L V Y
Sbjct: 115 GEKQNI-----LPSSLYTCKSLVILKLDGGVLLDVPRMVC---LPSLKTLELKGVRYFKQ 166
Query: 194 EMVSNLISGCVNLVFLGLEYCYGMKDVKICSLKITVLHLNYFTCEDGSLEISCPNLVSLE 253
+ L+ C L L + + K+ + ++ L+ T I P+L+S +
Sbjct: 167 GSLQRLLCNCPVLEDLVVNLSHHDNMGKLTVIVPSLQRLSLSTPSSREFVIDTPSLLSFQ 226
Query: 254 MIGFHVEKYDF--KNLSGLVEA 273
++ + + F +N+ L EA
Sbjct: 227 LVDRNDNSHTFLIENMPKLREA 248
>AT4G10400.1 | Symbols: | F-box family protein |
chr4:6446335-6447715 REVERSE
Length = 409
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 118/262 (45%), Gaps = 22/262 (8%)
Query: 17 LNDLPEEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLSSLNFPYSSVSTATSIPARSLA 76
++ LP+E+L ILSF+ TK A+ TS+L ++W +LW L+ L F S + + L
Sbjct: 4 ISGLPDEVLVKILSFVPTKVAVSTSILSKRWEFLWMWLTKLKFGSKRYSESE---FKRLQ 60
Query: 77 DFINQTL-IRRPSTSPPLQKFHLQFDFKEHLYSSHVDSWVRYAILHHVQQLELDFYISRE 135
F+++ L + R +P ++ F L H + WV A+ +++ EL Y S
Sbjct: 61 CFLDRNLPLHR---APVIESFRLVLS-DSHFKPEDIRMWVVVAVSRYIR--ELKIYSSHY 114
Query: 136 FQTSDIESDYDFPFFLLKNGNVKILKL-TKCRITLPTNVASMGLSFLKSVFLDQV-YLSD 193
+ +I P L ++ ILKL + +P V L LK++ L V Y
Sbjct: 115 GEKQNI-----LPSSLYTCKSLVILKLDGGVLLDVPRMVC---LPSLKTLELKGVRYFKQ 166
Query: 194 EMVSNLISGCVNLVFLGLEYCYGMKDVKICSLKITVLHLNYFTCEDGSLEISCPNLVSLE 253
+ L+ C L L + + K+ + ++ L+ T I P+L+S +
Sbjct: 167 GSLQRLLCNCPVLEDLVVNLSHHDNMGKLTVIVPSLQRLSLSTPSSREFVIDTPSLLSFQ 226
Query: 254 MIGFHVEKYDF--KNLSGLVEA 273
++ + + F +N+ L EA
Sbjct: 227 LVDRNDNSHTFLIENMPKLREA 248
>AT3G58900.2 | Symbols: | F-box family protein |
chr3:21773030-21774013 FORWARD
Length = 327
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 112/271 (41%), Gaps = 27/271 (9%)
Query: 20 LPEEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLSSLNF-------PYSSVSTATSIPA 72
LP E+L HILSFLSTK A TS+L ++WR L+ + L F P I
Sbjct: 7 LPNELLYHILSFLSTKEAALTSVLSKRWRNLFAFVPYLEFDDSVFLHPEERKREKEGI-L 65
Query: 73 RSLADFINQTLIRRPSTSPPLQKFHLQFDFKEHLYSSHVDSWVRYAILHHVQQLELDFYI 132
+S DF+++ L + ++ F L+ K + S HVD W+ + V L+L F
Sbjct: 66 QSFMDFVDRVLDLHGDSL--IKTFSLK--CKTGVDSDHVDRWICNVLARGVSDLDL-FID 120
Query: 133 SREFQTSDIESDYDFPFFLLKNGNVKILKLTKCRITLPTNVASMGLSFLKSVFLDQVYLS 192
R+ + E +L+ G+ L + + LP LK++ LD +L
Sbjct: 121 FRDLYSLPHEVGVSRTLVVLRVGSESDLYWWQKFLCLP---------MLKTLVLDSCWLC 171
Query: 193 DEMVSNLISGCVNLVFLGLEYC-YGMKDVKICSLKITVLHLNYFTC----EDGSLEISCP 247
L+ C L L + + +V + S + L ++ C SL P
Sbjct: 172 IGQFQILLLACPALEELDMTNTRWKDSNVTVSSSILKELTIDLHGCCSVVNLKSLSFDAP 231
Query: 248 NLVSLEMIGFHVEKYDFKNLSGLVEAGVAFL 278
+LV E Y NL LVEA + L
Sbjct: 232 SLVYFYYCDSLAEDYPQVNLKNLVEAQINLL 262
>AT3G58900.1 | Symbols: | F-box family protein |
chr3:21773030-21774013 FORWARD
Length = 327
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 112/271 (41%), Gaps = 27/271 (9%)
Query: 20 LPEEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLSSLNF-------PYSSVSTATSIPA 72
LP E+L HILSFLSTK A TS+L ++WR L+ + L F P I
Sbjct: 7 LPNELLYHILSFLSTKEAALTSVLSKRWRNLFAFVPYLEFDDSVFLHPEERKREKEGI-L 65
Query: 73 RSLADFINQTLIRRPSTSPPLQKFHLQFDFKEHLYSSHVDSWVRYAILHHVQQLELDFYI 132
+S DF+++ L + ++ F L+ K + S HVD W+ + V L+L F
Sbjct: 66 QSFMDFVDRVLDLHGDSL--IKTFSLK--CKTGVDSDHVDRWICNVLARGVSDLDL-FID 120
Query: 133 SREFQTSDIESDYDFPFFLLKNGNVKILKLTKCRITLPTNVASMGLSFLKSVFLDQVYLS 192
R+ + E +L+ G+ L + + LP LK++ LD +L
Sbjct: 121 FRDLYSLPHEVGVSRTLVVLRVGSESDLYWWQKFLCLP---------MLKTLVLDSCWLC 171
Query: 193 DEMVSNLISGCVNLVFLGLEYC-YGMKDVKICSLKITVLHLNYFTC----EDGSLEISCP 247
L+ C L L + + +V + S + L ++ C SL P
Sbjct: 172 IGQFQILLLACPALEELDMTNTRWKDSNVTVSSSILKELTIDLHGCCSVVNLKSLSFDAP 231
Query: 248 NLVSLEMIGFHVEKYDFKNLSGLVEAGVAFL 278
+LV E Y NL LVEA + L
Sbjct: 232 SLVYFYYCDSLAEDYPQVNLKNLVEAQINLL 262
>AT3G58900.3 | Symbols: | F-box family protein |
chr3:21773030-21774074 FORWARD
Length = 314
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 112/271 (41%), Gaps = 27/271 (9%)
Query: 20 LPEEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLSSLNF-------PYSSVSTATSIPA 72
LP E+L HILSFLSTK A TS+L ++WR L+ + L F P I
Sbjct: 7 LPNELLYHILSFLSTKEAALTSVLSKRWRNLFAFVPYLEFDDSVFLHPEERKREKEGI-L 65
Query: 73 RSLADFINQTLIRRPSTSPPLQKFHLQFDFKEHLYSSHVDSWVRYAILHHVQQLELDFYI 132
+S DF+++ L + ++ F L+ K + S HVD W+ + V L+L F
Sbjct: 66 QSFMDFVDRVLDLHGDSL--IKTFSLK--CKTGVDSDHVDRWICNVLARGVSDLDL-FID 120
Query: 133 SREFQTSDIESDYDFPFFLLKNGNVKILKLTKCRITLPTNVASMGLSFLKSVFLDQVYLS 192
R+ + E +L+ G+ L + + LP LK++ LD +L
Sbjct: 121 FRDLYSLPHEVGVSRTLVVLRVGSESDLYWWQKFLCLP---------MLKTLVLDSCWLC 171
Query: 193 DEMVSNLISGCVNLVFLGLEYC-YGMKDVKICSLKITVLHLNYFTC----EDGSLEISCP 247
L+ C L L + + +V + S + L ++ C SL P
Sbjct: 172 IGQFQILLLACPALEELDMTNTRWKDSNVTVSSSILKELTIDLHGCCSVVNLKSLSFDAP 231
Query: 248 NLVSLEMIGFHVEKYDFKNLSGLVEAGVAFL 278
+LV E Y NL LVEA + L
Sbjct: 232 SLVYFYYCDSLAEDYPQVNLKNLVEAQINLL 262
>AT5G38386.1 | Symbols: | F-box family protein |
chr5:15363178-15364815 FORWARD
Length = 403
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 67/122 (54%), Gaps = 11/122 (9%)
Query: 13 VDHSLNDLPEEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLSSL-----NFPYSSVSTA 67
+DH L++LP+E+L HI+SFL+TK A S+L ++WR L + +L + + V
Sbjct: 1 MDH-LSNLPDELLCHIMSFLTTKEAALISVLSKRWRNLIAFVPNLDIFDCDILHWEVRKE 59
Query: 68 TSIPARSL-ADFINQTLIRRPSTSPPLQKFHLQFDFKEHLYSSHVDSWVRYAILHHVQQL 126
R L DF+++ L + ++ PL+KF L YS VD W++ ++ V +L
Sbjct: 60 ERDDIRQLFMDFVDRVLALQGNS--PLKKFSLCCGGGS--YSDRVDCWIQNVMVRGVSEL 115
Query: 127 EL 128
+L
Sbjct: 116 DL 117
>AT1G51370.1 | Symbols: | F-box family protein |
chr1:19045615-19047141 FORWARD
Length = 435
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 86/200 (43%), Gaps = 44/200 (22%)
Query: 14 DHSLNDLPEEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLSSLNF-PYSSVSTATSIPA 72
+ ++ LPE +++ IL LSTK +++TS L KWRYLW + L+ PY+S +T T +
Sbjct: 18 EDRISQLPEPLISEILFHLSTKDSVRTSALSTKWRYLWQSVPGLDLDPYASSNTNTIV-- 75
Query: 73 RSLADFINQTLIRRPSTSPPLQKFHLQFDFKEHLYSSHVDSWVRYAIL---HHVQQLEL- 128
F E + SH DSW+R L +H + +L
Sbjct: 76 ----------------------------SFVESFFDSHRDSWIRKLRLDLGYHHDKYDLM 107
Query: 129 ---DFYISREFQTSDIES--DYDFPFFLLKNGNVKILKLTKCRITLPTNVASMGLSFLKS 183
D +R Q D+ D P + + L+L R + TN + L LK
Sbjct: 108 SWIDAATTRRIQHLDVHCFHDNKIPLSIYTCTTLVHLRL---RWAVLTNPEFVSLPCLKI 164
Query: 184 VFLDQV-YLSDEMVSNLISG 202
+ + V Y ++ + LISG
Sbjct: 165 MHFENVSYPNETTLQKLISG 184
>AT5G62970.1 | Symbols: | F-box family protein |
chr5:25272033-25273537 FORWARD
Length = 449
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 128/310 (41%), Gaps = 48/310 (15%)
Query: 22 EEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLSSLNFPYSSV----------------- 64
+E+L ILSFL K AI TS+L ++W++LW ++ L + S+
Sbjct: 10 DELLVKILSFLPFKFAITTSVLSKQWKFLWMRVPKLEYDEDSMYSFEYSFRYFLPKAKEV 69
Query: 65 -STATSIPARS---LADFINQTLIRRPSTSPPLQKFHLQFDFKEHLYSSHVDSWVRYAIL 120
S SI + S + FI + L +SP ++ L+F F E + WV A+
Sbjct: 70 DSETYSIVSESGHRMRSFIEKNLPLH--SSPVIESLRLKF-FTEVFQPEDIKLWVEIAVS 126
Query: 121 HHVQQLELDFYISREFQTSDIESDYDFPFFLLKN-GNVKILKLTKCRITLPTNVASM-GL 178
Q+L +DF+ + L +N K L K R + +V + L
Sbjct: 127 RCAQELSVDFFPKEKHNA-----------LLPRNLYTCKSLVTLKLRNNILVDVPHVFSL 175
Query: 179 SFLKSVFLDQVYLSD-EMVSNLISGCVNLVFLGLEYCYGMKDVKICSLKITVLHLNYFT- 236
LK + L++V D E + L+S C L L +E G K+ + ++L L++
Sbjct: 176 PSLKILHLERVTYGDGESLQRLLSNCSVLEDLVVELDTGDNVRKLDVIIPSLLSLSFGMS 235
Query: 237 --CEDGSLEISCPNLVSLEMIGFHVEKYDFKNLSGLVEAGVAFLHMWKYYRH-WSQVMRF 293
C I P+L ++ K SGL+E RH + +++
Sbjct: 236 RYCAYEGYRIDTPSLKYFKLTDLS------KTFSGLIENMPKLEEANITARHNFKKLLEL 289
Query: 294 LLHVKRLTVQ 303
+ VKRL++
Sbjct: 290 VTSVKRLSLN 299
>AT4G00160.1 | Symbols: | F-box family protein | chr4:63465-65365
FORWARD
Length = 453
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 95/189 (50%), Gaps = 17/189 (8%)
Query: 17 LNDLPEEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLSSLNFPYSSVSTATSIPARSLA 76
+++LP+ +L ILSFL TK + TS+ ++WR LW + +L F + +
Sbjct: 18 ISELPDALLIKILSFLPTKIVVATSVFSKQWRPLWKLVPNLEFDSEDYDDKEQY---TFS 74
Query: 77 DFINQTLIRRPSTSPPLQKFHLQFDFKEHLYSSHVDSWVRYAILHHVQQLELDFYISREF 136
+ + ++ + +P L+ F L+F+ E + + WV A H+++L L ++ +
Sbjct: 75 EIVCKSFLSH--KAPVLESFRLEFE-SEKVDPVDIGLWVGIAFSRHLRELVL---VAADT 128
Query: 137 QTSDIESDYDFPFFLLKNGNVKILKLTKCRITLPTNVAS-MGLSFLKSVFLDQVYLSDE- 194
T + + FP L ++ L+L + + +++S + + L+++ L+ V DE
Sbjct: 129 GTG---TAFKFPSSLCTCNTLETLRLV---LLILVDISSPVVMKSLRTLHLELVSYKDES 182
Query: 195 MVSNLISGC 203
+ NL+SGC
Sbjct: 183 SIRNLLSGC 191
>AT2G29910.2 | Symbols: | F-box family protein |
chr2:12751823-12752830 REVERSE
Length = 335
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 121/294 (41%), Gaps = 62/294 (21%)
Query: 17 LNDLPEEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLSSLNFPYSSVSTATSIPA---R 73
++ LP+EIL +LS L TK A T++L ++W L + L+ ++ P +
Sbjct: 7 ISSLPDEILGKVLSLLPTKRAASTAVLSKRWNNLPALVDKLDI-NDAIGGPGGFPEFIDK 65
Query: 74 SLADFINQTLIRRPSTSPPLQKFHLQFDFKEHLYSSHVDSWVRYAILHHVQQLELD---- 129
+LA N T I+R S + +F + E S V++W+R + QL L+
Sbjct: 66 TLALLTNSTTIKRTS-------LNNEFQYGE----SQVNTWIRSFLERGCLQLYLNAQSL 114
Query: 130 FYISREFQTSDIESDYDF-----PFFLLKNGNVKILKLTKCRITLPTNVASMGLSFLKSV 184
+ I EF TS+ + P LL G V KL + L T V S
Sbjct: 115 YTIDTEFFTSNTLVELTITGGFSPDGLLPPGGVFFPKLKTLSLVLMTFVDS--------- 165
Query: 185 FLDQVYLSDEMVSNLISGCVNLVFLGLEYCYGMKDVKICSL-----------KITVLH-- 231
+M ISGC L E+ +++I + ++T++H
Sbjct: 166 ---------DMYELFISGCPLLE----EFLLRNDEIEIPPVWNALVSSPSIKRLTIVHHF 212
Query: 232 LNYFTCEDGSLEISCPNLVSLEMIGFHVEKYDFKNLSGLVEAGVAFLHMWKYYR 285
NY DG PNLV L+ + + Y+ +L LVEA + L W+ R
Sbjct: 213 PNYREAHDGCW-FRTPNLVYLDYSSYVPDWYEV-DLGSLVEARLD-LRSWERLR 263
>AT1G51370.2 | Symbols: | F-box family protein |
chr1:19045615-19046748 FORWARD
Length = 346
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 86/200 (43%), Gaps = 44/200 (22%)
Query: 14 DHSLNDLPEEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLSSLNF-PYSSVSTATSIPA 72
+ ++ LPE +++ IL LSTK +++TS L KWRYLW + L+ PY+S +T T +
Sbjct: 18 EDRISQLPEPLISEILFHLSTKDSVRTSALSTKWRYLWQSVPGLDLDPYASSNTNTIV-- 75
Query: 73 RSLADFINQTLIRRPSTSPPLQKFHLQFDFKEHLYSSHVDSWVRYAIL---HHVQQLEL- 128
F E + SH DSW+R L +H + +L
Sbjct: 76 ----------------------------SFVESFFDSHRDSWIRKLRLDLGYHHDKYDLM 107
Query: 129 ---DFYISREFQTSDIES--DYDFPFFLLKNGNVKILKLTKCRITLPTNVASMGLSFLKS 183
D +R Q D+ D P + + L+L R + TN + L LK
Sbjct: 108 SWIDAATTRRIQHLDVHCFHDNKIPLSIYTCTTLVHLRL---RWAVLTNPEFVSLPCLKI 164
Query: 184 VFLDQV-YLSDEMVSNLISG 202
+ + V Y ++ + LISG
Sbjct: 165 MHFENVSYPNETTLQKLISG 184
>AT1G16940.1 | Symbols: | F-box family protein |
chr1:5791983-5793491 FORWARD
Length = 434
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 86/203 (42%), Gaps = 22/203 (10%)
Query: 17 LNDLPEEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLSSLNFPYSSVSTATSIPARSLA 76
+N LP+ +L I L T+ ++TSL+CR+WRY+W L L+ +
Sbjct: 13 INQLPDSLLCEIFFNLPTEEVVKTSLICRRWRYVWQSLPGLDLVINGSKNYDKF------ 66
Query: 77 DFINQTLIRRPSTSPPLQKFHLQFDFKEHLYSSHVDSWVRYAILHHVQQLELDFYISREF 136
DF+ + + LQ+ L++ H + + I H +Q LD +R +
Sbjct: 67 DFLERFMF--------LQRVKLRYVGYGHNCRNMTSMMMNNVIKHKIQH--LDVGSNRRY 116
Query: 137 QTSDIESDYDFPFFLLKNGNVKILKLTKCRITLPTNVASMGLSFLKSVFLDQVYLSDEM- 195
+E P + LKL R LP + S+ L LK + L ++ D +
Sbjct: 117 VYDRVEIP---PTIYTSCERLVFLKLH--RANLPKSPDSVSLPCLKIMDLQKINFVDSLD 171
Query: 196 VSNLISGCVNLVFLGLEYCYGMK 218
+ L+S C L L ++ YG K
Sbjct: 172 MEKLVSVCPALETLTMDKMYGAK 194
>AT3G58930.1 | Symbols: | F-box family protein |
chr3:21778381-21780014 REVERSE
Length = 482
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 122/278 (43%), Gaps = 27/278 (9%)
Query: 17 LNDLPEEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLSSLN-----FPYSSVSTATSIP 71
+++LP+ + HILSFL K TS+L + W LW + L+ F + A +
Sbjct: 4 VSNLPDGVRGHILSFLPAKHIALTSVLSKSWLNLWKLIPILDIDDSEFLHPEEGKAERLE 63
Query: 72 AR-SLADFINQTLIRRPSTSPPLQKFHLQFDFKEHLYSSHVDSWVRYAILHHVQQLELDF 130
R S DF+++ L + + P+ +F L+ ++ HV+ W+ + V +LD
Sbjct: 64 IRQSFVDFVDRVLALQDDS--PIDRFSLK--CITGIHPDHVNRWICNVLQRGVS--DLDL 117
Query: 131 YISREFQTSDIESDYD-FPFFLLKNGNVKILKLTKCR-ITLPTNVASMGLSFLKSVFLD- 187
+I +F D + D D P + + + LK+ R + L LKS+++D
Sbjct: 118 FI--DFSYEDTQEDEDMLPQEMFVSKTLVKLKIRNDRCVDWWCGKGGTSLPMLKSLYIDS 175
Query: 188 QVYLSDEMVSNLISGCV--NLVFLGLEYCYGMKDVKICSL-KITVLHLNYFTCED----G 240
+ L +M L S V L +E+ + V SL K+++L CED
Sbjct: 176 DLILWGKMKRFLSSFPVLEELRMASMEWKESHETVSSASLRKLSILGTG---CEDYVNPK 232
Query: 241 SLEISCPNLVSLEMIGFHVEKYDFKNLSGLVEAGVAFL 278
S+ P+L+ L E Y N+ L+EA + +
Sbjct: 233 SISFDTPSLLYLNYSDLVAEDYPLVNMGKLLEARINLI 270
>AT2G29910.1 | Symbols: | F-box family protein |
chr2:12751686-12752830 REVERSE
Length = 352
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 121/294 (41%), Gaps = 62/294 (21%)
Query: 17 LNDLPEEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLSSLNFPYSSVSTATSIPA---R 73
++ LP+EIL +LS L TK A T++L ++W L + L+ ++ P +
Sbjct: 7 ISSLPDEILGKVLSLLPTKRAASTAVLSKRWNNLPALVDKLDI-NDAIGGPGGFPEFIDK 65
Query: 74 SLADFINQTLIRRPSTSPPLQKFHLQFDFKEHLYSSHVDSWVRYAILHHVQQLELD---- 129
+LA N T I+R S + +F + E S V++W+R + QL L+
Sbjct: 66 TLALLTNSTTIKRTS-------LNNEFQYGE----SQVNTWIRSFLERGCLQLYLNAQSL 114
Query: 130 FYISREFQTSDIESDYDF-----PFFLLKNGNVKILKLTKCRITLPTNVASMGLSFLKSV 184
+ I EF TS+ + P LL G V KL + L T V S
Sbjct: 115 YTIDTEFFTSNTLVELTITGGFSPDGLLPPGGVFFPKLKTLSLVLMTFVDS--------- 165
Query: 185 FLDQVYLSDEMVSNLISGCVNLVFLGLEYCYGMKDVKICSL-----------KITVLH-- 231
+M ISGC L E+ +++I + ++T++H
Sbjct: 166 ---------DMYELFISGCPLLE----EFLLRNDEIEIPPVWNALVSSPSIKRLTIVHHF 212
Query: 232 LNYFTCEDGSLEISCPNLVSLEMIGFHVEKYDFKNLSGLVEAGVAFLHMWKYYR 285
NY DG PNLV L+ + + Y+ +L LVEA + L W+ R
Sbjct: 213 PNYREAHDGCW-FRTPNLVYLDYSSYVPDWYEV-DLGSLVEARLD-LRSWERLR 263
>AT4G09920.1 | Symbols: | F-box family protein |
chr4:6224691-6225905 FORWARD
Length = 316
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 57/109 (52%), Gaps = 6/109 (5%)
Query: 20 LPEEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLSSLNFPYSSVSTATSIPARSLADFI 79
LP+E+L ILSF+ TK A+ TS+L ++W +LW L+ L F S + + L F+
Sbjct: 7 LPDEVLVKILSFVPTKVAVSTSILSKRWEFLWMWLTKLKFGSKRYSESE---FKRLQCFL 63
Query: 80 NQTLIRRPSTSPPLQKFHLQFDFKEHLYSSHVDSWVRYAILHHVQQLEL 128
++ L +P ++ F L H + WV A+ ++++L++
Sbjct: 64 DRNLPLH--RAPVIESFRLVLS-DSHFKPEDIRMWVVVAVSRYIRELKI 109
>AT4G22280.2 | Symbols: | F-box family protein |
chr4:11776368-11777517 REVERSE
Length = 332
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 116/272 (42%), Gaps = 34/272 (12%)
Query: 17 LNDLPEEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLSSLNFPYSSVSTATSIPARSLA 76
+N L ++I+ HILS LS K A TS+L +WRYL+ +L V S
Sbjct: 4 INGLSDDIICHILSLLSFKEATSTSVLSMRWRYLFAFRPNLCLDDQEVGGGD-----SFI 58
Query: 77 DFINQTLIRRPSTSPPLQKFHLQFDFKEHLYSSHVDSWVRYAILHHVQQLELDFYISREF 136
DF+++ L+ + + P+++ ++ + + + HV W+ + H V L++D +
Sbjct: 59 DFVDRVLVV--TGNFPIRRISIK--CRMSIDTGHVTRWMVDVLEHGVSYLDIDIISEDDI 114
Query: 137 QTSDIESDYDFPFFLLKNGNVKILKLTKCRITLPTNVASMGLSFLKSVFLDQVYLSDE-- 194
P + + LKL + + + S L LK++FL ++ +
Sbjct: 115 GF--------VPLEIFTCKTLVELKLARGFYAMVPDYVS--LPSLKTLFLSSIWFCNRDC 164
Query: 195 -MVSNLISGCV---NLVFLG-----LEYCYGMKDVKICSLKITVLHLNYFTCEDGSLEIS 245
+ L+S C L +G +E+C + + L IT + F E + I
Sbjct: 165 CPLGRLLSACPVLEELTIIGGCWQHIEFCRTVSSSTLKKLTIT----SSFHYEYWGITID 220
Query: 246 CPNLVSLEMIGFHVEKYDFKNLSGLVEAGVAF 277
P+L LE + F NL LVEA +A
Sbjct: 221 TPSLAYLEYSDLVPRHFPFVNLESLVEAKLAL 252
>AT4G22280.1 | Symbols: | F-box family protein |
chr4:11776054-11777517 REVERSE
Length = 415
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 116/273 (42%), Gaps = 36/273 (13%)
Query: 17 LNDLPEEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLSSLNFPYSSVSTATSIPARSLA 76
+N L ++I+ HILS LS K A TS+L +WRYL+ +L V S
Sbjct: 4 INGLSDDIICHILSLLSFKEATSTSVLSMRWRYLFAFRPNLCLDDQEVGGGD-----SFI 58
Query: 77 DFINQTLIRRPSTSPPLQKFHLQFDFKEHLYSSHVDSWVRYAILHHVQQLELDFYISREF 136
DF+++ L+ + + P+++ ++ + + + HV W+ + H V L++D +
Sbjct: 59 DFVDRVLVV--TGNFPIRRISIK--CRMSIDTGHVTRWMVDVLEHGVSYLDIDIISEDDI 114
Query: 137 QTSDIESDYDFPFFLLKNGNVKILKLTKCRITLPTNVASMGLSFLKSVFLDQVYLSDE-- 194
P + + LKL + + + S L LK++FL ++ +
Sbjct: 115 GF--------VPLEIFTCKTLVELKLARGFYAMVPDYVS--LPSLKTLFLSSIWFCNRDC 164
Query: 195 -MVSNLISGCV---NLVFLG-----LEYCYGMKDVKICSLKIT-VLHLNYFTCEDGSLEI 244
+ L+S C L +G +E+C + + L IT H Y+ + I
Sbjct: 165 CPLGRLLSACPVLEELTIIGGCWQHIEFCRTVSSSTLKKLTITSSFHYEYW-----GITI 219
Query: 245 SCPNLVSLEMIGFHVEKYDFKNLSGLVEAGVAF 277
P+L LE + F NL LVEA +A
Sbjct: 220 DTPSLAYLEYSDLVPRHFPFVNLESLVEAKLAL 252
>AT5G22610.1 | Symbols: | F-box family protein |
chr5:7515217-7516916 FORWARD
Length = 472
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 62/128 (48%), Gaps = 9/128 (7%)
Query: 12 AVDHSLNDLPEEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLSSLNFPYSSVSTATSIP 71
A++ ++ LPE +L+ ILS+L TK ++TS+L ++W+ +W + L+ S
Sbjct: 15 AIEDLISKLPEVLLSQILSYLPTKDIVRTSVLSKRWKSVWLLIPGLDLDSSEFPHYD--- 71
Query: 72 ARSLADFINQTLIRRPSTSPPLQKFHLQFDFKEHLYSSHVDSWVRYAILHHVQQLELDF- 130
+ DF+N+ L +P L K L E+ S V W +Q L+++F
Sbjct: 72 --TFVDFMNEFLFFSREENPCLHKLKLSIQKNEN-DPSCVTLWTDCVARGKLQHLDVEFG 128
Query: 131 --YISREF 136
+ REF
Sbjct: 129 GRVMEREF 136
>AT4G26350.1 | Symbols: | F-box family protein |
chr4:13326853-13328315 FORWARD
Length = 431
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 87/199 (43%), Gaps = 23/199 (11%)
Query: 17 LNDLPEEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLSSLNFPYSSVSTATSIPARSLA 76
++ P+ +L ILSF+ TK I TSLL ++W LW + L + ++ +
Sbjct: 4 ISQCPDHLLLRILSFIPTKDVIVTSLLSKRWGSLWRWVPKLEYDFTRQNM-------RFV 56
Query: 77 DFINQTLIRRPSTSPPLQKFHLQ-FDFKEHLYSSHVDSWVRYAILHHVQQLELDFYISRE 135
F+ ++L++ + +P L+ HL+ + + W+ A+ V++LE+ S E
Sbjct: 57 KFVYRSLLQ--NNAPVLESLHLKNIILYAECRTVDIGGWIDIAVSRRVRELEISINCSDE 114
Query: 136 FQTSDIESDYDFPFFLLKNGNVK--ILKLTKCR-ITLPTNVASMGLSFLKSVFLDQVYLS 192
+ P L G ++ IL + C + +P V L L + Y
Sbjct: 115 --------KFRLPSSLYTCGTLESFILTIKHCHLVDVPLAVCLPSLKKLHLRCIGWAY-- 164
Query: 193 DEMVSNLISGCVNLVFLGL 211
+ + LISGC NL L L
Sbjct: 165 NATLLRLISGCTNLEELRL 183
>AT3G59210.1 | Symbols: | F-box family protein |
chr3:21889942-21891553 FORWARD
Length = 484
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 118/275 (42%), Gaps = 32/275 (11%)
Query: 17 LNDLPEEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLSSLNFPY-SSVSTATSIPAR-- 73
+N LP+ +L ILS LSTK A TSLL ++WRYL+ + +L+F S+ ++ +
Sbjct: 9 INCLPDNLLCQILSNLSTKEAALTSLLSKRWRYLFALVPNLDFDVLPSLHPEVAMQDQDQ 68
Query: 74 -SLADFINQTLIRRPSTSPPLQKFHLQFDFKEHLYSSHVDSWVRYAILHHVQQLELDFYI 132
S DF+++ L R + KF L+ + + V W+ + H V L L ++
Sbjct: 69 TSFIDFVDRVLKLRGKDH--INKFSLKC--GDGIEDEDVFPWILNTLRHGVSDLSL--HV 122
Query: 133 SREFQTSDIESDYDFPFFLLKNGNVKILKLTKCRITLPTNVASMGLSFLKSVFLDQVYLS 192
S Y P + + + LK+ + + ++ L LK++ LD V
Sbjct: 123 SPSLV-------YWLPSKVFASKTLVRLKIGP-KDGPRVKLRNVCLPKLKTLNLDSVVFE 174
Query: 193 DEMV--SNLISGC--------VNLVFLGLEYCYGMKDVKICSLKITVLHLNYFTCEDGSL 242
+ + + L+SGC +NL + + C + LK L+ + + S+
Sbjct: 175 EGKIGFAKLLSGCPVLEELSLLNLAWDRWDSCSVSSKI----LKRLTLYCAHSSRNPKSV 230
Query: 243 EISCPNLVSLEMIGFHVEKYDFKNLSGLVEAGVAF 277
PN+V E KY N LVEA +
Sbjct: 231 SFDTPNVVYFEYSDNIANKYPKVNFDSLVEASIGI 265
>AT3G26930.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: sperm cell;
CONTAINS InterPro DOMAIN/s: FBD (InterPro:IPR013596),
FBD-like (InterPro:IPR006566), Leucine-rich repeat 2
(InterPro:IPR013101); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G13965.1); Has 678
Blast hits to 661 proteins in 16 species: Archae - 0;
Bacteria - 2; Metazoa - 21; Fungi - 0; Plants - 651;
Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
| chr3:9925931-9927351 FORWARD
Length = 409
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 119/273 (43%), Gaps = 37/273 (13%)
Query: 41 SLLCRKWRYLWCQLSSLNFPYSSVSTATSIPARSLADFINQTLIRRPSTSPPLQKFHLQF 100
S+L ++WR LW L L F D +N+ L+ ++ LQ HL
Sbjct: 2 SVLSKRWRSLWKMLPRLKFD-----------DWMFPDNVNRCLLSHQASF--LQSLHLVI 48
Query: 101 DFKEHLYSSHVDSWVRYAILHHVQQLELDFYISREFQTSDIESDYDFPFFLLKNGNVKIL 160
D+ + SH+ + + I EL Y++ FQ S + FP L +++ L
Sbjct: 49 DYD---FVSHMHTGILMGIAFGRHIRELVLYVNG-FQES-----FTFPLSLCNCESLETL 99
Query: 161 KLT-KCRITLPTNVASMGLSFLKSVFLDQV-YLSDEMVSNLISGCVNLVFLGLEYCYGMK 218
L I +P+ V L L+++ LD V Y DE V NL+SGC++L L +
Sbjct: 100 TLGHNVLIDVPSPVF---LKSLRTLHLDGVEYTDDESVVNLLSGCISLENLVVHRVIQAD 156
Query: 219 ----DVKICSLKITVLHLNYFTCEDGSLEISCPNLVSLEMIGFHVEKYDFKNLSGLVEAG 274
+ + SLK L + ED I+ P+L L+++G + Y +N LVE
Sbjct: 157 VTTFTIAVPSLKRLTLTTEFDDDEDSVYVINAPSLKYLKILG--DKAYLIENSPELVEVS 214
Query: 275 VA----FLHMWKYYRHWSQVMRFLLHVKRLTVQ 303
+ + + + ++R L VKR++++
Sbjct: 215 LTDRQVTVDGYPIASYVENLLRSLTSVKRMSLK 247
>AT3G58940.1 | Symbols: | F-box family protein |
chr3:21781002-21783213 REVERSE
Length = 618
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 73/155 (47%), Gaps = 18/155 (11%)
Query: 17 LNDLPEEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLSSLNF-------PYSSVSTATS 69
+++LPEE+ HILSFL TK A TS+L + W LW ++L+ P +
Sbjct: 4 VSNLPEEVRCHILSFLPTKHAALTSVLSKSWLNLWKFETNLDIDDSDFLHPEEGKAERDE 63
Query: 70 IPARSLADFINQTLIRRPSTSPPLQKFHLQFDFKEHLYSSHVDSWVRYAILHHVQQLELD 129
I +S +F++ L + + P++KF L+ ++ HV+ W+ + V D
Sbjct: 64 I-RQSFVEFVDGVLALQGDS--PIEKFSLK--CITGIHPDHVNRWICNVLQRGVS----D 114
Query: 130 FYISREFQTSDIESD--YDFPFFLLKNGNVKILKL 162
Y+ +F D E D Y P + + + LKL
Sbjct: 115 LYLFTDFSDEDTEEDGGYRLPQEMFVSRTLVKLKL 149
>AT3G58950.1 | Symbols: | F-box family protein |
chr3:21784116-21785840 REVERSE
Length = 417
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 59/111 (53%), Gaps = 6/111 (5%)
Query: 20 LPEEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLSSLNFPYSSVSTATSIPARSLADFI 79
LP+E+L HILSFL+TK A S++ ++WR + + +L+ I S DF+
Sbjct: 7 LPDEVLCHILSFLTTKEAALASVVSKRWRNQFALVPNLDIDEEGKREREEI-LLSFMDFV 65
Query: 80 NQTLIRRPSTSPPLQKFHLQFDFKEHLYSSHVDSWVRYA-ILHHVQQLELD 129
+ L + + P++KF L+ K ++ +D+W R +L ++ L +D
Sbjct: 66 DNVLALQADS--PIKKFSLK--CKTGVHPRRLDAWARLGPVLPMLKTLIID 112
>AT1G64540.1 | Symbols: | F-box family protein |
chr1:23966909-23968425 FORWARD
Length = 444
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 84/190 (44%), Gaps = 31/190 (16%)
Query: 17 LNDLPEEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLSSLNFPYSSVSTATSIPARSLA 76
+++LP+EIL ILS L TK + TS+L ++WR L + + + SS S +
Sbjct: 7 ISNLPDEILGKILSLLPTKLGVSTSVLSKRWRNLILLVDNFDLEDSSTS--------GFS 58
Query: 77 DFINQTLIRRPSTSPPLQKFHLQFDFKEHLYSSHVDSWVRYAILHHVQQLELDFYISREF 136
F+ QT+ R + P+++ L H S DSW+ A +L L
Sbjct: 59 AFLEQTVARL--NTCPIKRLSLN---GRHYRFSSADSWISTAFERGCLELHL-------- 105
Query: 137 QTSDIESDYDFPFFLLKNGNVKILKLTKCRITLPTNVASMGLSF---LKSVFLDQVYLSD 193
+S Y L N VK L L+ +I L V G F LK++ L V
Sbjct: 106 -----QSQYLDTGILSSNTLVK-LTLSD-QIYLQGLVPHDGTVFFPALKTLSLGAVVADR 158
Query: 194 EMVSNLISGC 203
++ +LISGC
Sbjct: 159 DVYESLISGC 168
>AT5G27750.1 | Symbols: | F-box family protein |
chr5:9828430-9829981 FORWARD
Length = 459
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 118/286 (41%), Gaps = 40/286 (13%)
Query: 17 LNDLPEEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLSSLNFPYSSVSTATSIPARSLA 76
+++LPE ++T IL L TK +++TS+L +W+ LW + L+ S +
Sbjct: 7 ISELPESLITQILLCLPTKDSVKTSVLSTRWKNLWLNVPGLDLTCSDFPFEDEEYEQVFI 66
Query: 77 DFINQTLIRRPSTSPPLQKFHLQFDFKE-HLYSSHVDSWVRYAI--LHHVQ-----QLEL 128
+FI++ L P + LQ F + + +E + + + + I L V + E
Sbjct: 67 NFIDRFLEFNPESR--LQTFEVDYKRREIRGFKDRIGTAINRGIRLLDAVSSTMYWEEEC 124
Query: 129 DFYISREFQTSDIESDYDFPFFLLKNGNVKILKLTKCRITLPTNVASMGLSFLKSVFLDQ 188
Y EF P L + + LKL + P + + LK + L +
Sbjct: 125 IMYPYLEF----------MPLNLFTSKTLVTLKLRDSALNDP---GLLSMPCLKFMILRE 171
Query: 189 VYLSDEM-VSNLISGCV---NLVFLGLEYCYGMKD------VKICSLKITVLHLNY-FTC 237
V S M + L+SGC +L + C+ D V+ SLK + L Y C
Sbjct: 172 VRWSGTMSLEKLVSGCPVLEDLTLVRTLICHIDDDELPVTRVRSRSLKTFYVPLAYGVGC 231
Query: 238 E----DGSLEISCPNLVSLEMIGFHVEKYDFKNLSGL--VEAGVAF 277
D LEI P L ++ + H + KNL+ L +E + F
Sbjct: 232 RSRVPDKVLEIDAPGLENMTLKEDHFDGIVVKNLTSLFMIELNIKF 277
>AT2G26860.1 | Symbols: | F-box family protein |
chr2:11452196-11453584 REVERSE
Length = 405
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 90/207 (43%), Gaps = 23/207 (11%)
Query: 17 LNDLPEEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLSSLNFPYSSVSTATSIPARSLA 76
++ LP+E+L IL L TK + TS+L ++W +LW + L F + + I
Sbjct: 4 ISGLPDELLVEILHCLPTKEVVSTSILSKRWEFLWLWVPKLTFVMNHYESDLPI-----Q 58
Query: 77 DFINQTL-IRRPSTSPPLQKFHLQFDFKEHLYSSHVDSWVRYAILHHVQQLELDFYISRE 135
DFI + L + +P ++ FHLQ F + WV I V++L +++
Sbjct: 59 DFITKNLRLLKPQV---IESFHLQC-FSSSFKPEDIKHWVVTTISRRVRELIINYCDLSW 114
Query: 136 FQTSDIESDYDFPFFLLKNGNVKILKLTKCRITLPTNVASMGLSFLKSVFLDQVYLSDEM 195
+ D P L ++ LKL I + ++ L LK++ LD V S+E
Sbjct: 115 LDKPVVL--LDLPNSLYTCTSLVTLKLIGHSIIVDVP-RTVSLPCLKTLELDSVAYSNEE 171
Query: 196 VSNLISGCVNLVFLGLEYCYGMKDVKI 222
L+ L YC ++D+ I
Sbjct: 172 SLRLL----------LSYCPVLEDLTI 188
>AT2G26860.2 | Symbols: | F-box family protein |
chr2:11452421-11453584 REVERSE
Length = 355
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 90/207 (43%), Gaps = 23/207 (11%)
Query: 17 LNDLPEEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLSSLNFPYSSVSTATSIPARSLA 76
++ LP+E+L IL L TK + TS+L ++W +LW + L F + + I
Sbjct: 4 ISGLPDELLVEILHCLPTKEVVSTSILSKRWEFLWLWVPKLTFVMNHYESDLPI-----Q 58
Query: 77 DFINQTL-IRRPSTSPPLQKFHLQFDFKEHLYSSHVDSWVRYAILHHVQQLELDFYISRE 135
DFI + L + +P ++ FHLQ F + WV I V++L +++
Sbjct: 59 DFITKNLRLLKPQV---IESFHLQC-FSSSFKPEDIKHWVVTTISRRVRELIINYCDLSW 114
Query: 136 FQTSDIESDYDFPFFLLKNGNVKILKLTKCRITLPTNVASMGLSFLKSVFLDQVYLSDEM 195
+ D P L ++ LKL I + ++ L LK++ LD V S+E
Sbjct: 115 LDKPVVL--LDLPNSLYTCTSLVTLKLIGHSIIVDVP-RTVSLPCLKTLELDSVAYSNEE 171
Query: 196 VSNLISGCVNLVFLGLEYCYGMKDVKI 222
L+ L YC ++D+ I
Sbjct: 172 SLRLL----------LSYCPVLEDLTI 188
>AT1G67390.1 | Symbols: | F-box family protein |
chr1:25244690-25247139 FORWARD
Length = 479
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 125/309 (40%), Gaps = 58/309 (18%)
Query: 9 VFSAVDHSLNDLPEEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLSSLNFPYSSVSTAT 68
+ +D ++ LP+++L IL+ LST+ A++TS+L +W+ +W Q+ L+F S + +
Sbjct: 35 LIDPIDDRISKLPDDVLVMILASLSTEDALKTSVLSTRWKNVWKQVPYLHFDLLSATYES 94
Query: 69 SIPA---RSLADFINQTLIRRPSTSPPLQKFHLQFDFKEHLYSSHVDSWVRYAILHHVQQ 125
+ A S+A+ I Q + H F H + +++W+R L
Sbjct: 95 GLIAALSNSVAESITQVINNHNGHLMGCSIHH----FAHHCVNGVLENWIRLLTL----- 145
Query: 126 LELDFYISREFQTSDIESDYDFPFFLLKNGNVKILKLTKCRITLPTNVASMGLSFLKSVF 185
+ + F L N KL K R TNV +
Sbjct: 146 ------------------EKNTRFLSLCN------KLGKGR---RTNVLRFSPNTFSHPK 178
Query: 186 LDQVYLS--DEMVSNLISGCVNLVFLGLEYCYGMKDV------KICSLKITVLHLNYFTC 237
L ++L D + ++ C NL L LE DV SLK+ VL+ ++
Sbjct: 179 LATLFLRRYDLVTAHAFKECENLKILKLEGILAEVDVFNTVIASCPSLKVLVLNCMWYN- 237
Query: 238 EDGSLEISCPNLVSLEMIGFHVEKYDFKNLSGLVEAGVAFLHMWK-YYRHWSQVMRFLLH 296
E L+I NL L + HV+ ++ A L ++ +Y +++ F++
Sbjct: 238 EKTCLKIHNNNLKVLHLDCPHVD---------CIDVSAALLDIFSIFYFAFAKEQNFVIK 288
Query: 297 VKRLTVQNW 305
RL NW
Sbjct: 289 APRLLFNNW 297
>AT1G21990.1 | Symbols: | F-box family protein |
chr1:7740530-7742106 REVERSE
Length = 465
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 61/127 (48%), Gaps = 15/127 (11%)
Query: 21 PEEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLSSLNFPYSSVSTATSIPARSLADFIN 80
P+EIL ILSFL T A TS+L ++WR L + L S S+ DF+
Sbjct: 15 PDEILGKILSFLPTHHAATTSVLSKRWRNLLPLVDKLELTEDHPSGRCSL---GFPDFVE 71
Query: 81 QT--LIRRPSTSPPLQKFHLQFDFKEHLYS-SHVDSWVRYAILHHVQQLELD----FYIS 133
+T L+ RP + ++K HL D HL+ S SW+R + V L+ + +
Sbjct: 72 KTLALLDRPCSV--IKKVHLNCD---HLHGESRFYSWIRTVLERGVLDFHLESSRMYRVE 126
Query: 134 REFQTSD 140
EF TS+
Sbjct: 127 TEFFTSN 133
>AT1G32375.1 | Symbols: | F-box family protein |
chr1:11679230-11680679 FORWARD
Length = 422
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 128/298 (42%), Gaps = 34/298 (11%)
Query: 17 LNDLPEEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLSSLNFPYSSVSTATSIPARSLA 76
L+ LPE +L ILS LS K + T +L ++W++LW + L + S +I S +
Sbjct: 4 LSQLPEALLVRILSLLSAKDVVSTMVLSKRWQFLWMLVPKLIYDDS----YQAIEYGSFS 59
Query: 77 DFINQTLIRRPSTSPPLQKFHLQFDFKEHLYSSHVDSWVRYAILHHVQQLELDFYISREF 136
F++++ + L H + K + + W++ A +++L ++ S
Sbjct: 60 RFVDRSFTLHDAQV--LDTLHFKLG-KTSCGTGDIRVWIKTAEKSCLRELIIEIDKSNSD 116
Query: 137 QTSDIESDYDFPFFLLKNGNVKI-LKLTKCRITLPTNVASMGLSFLKSVFLDQV-YLSDE 194
+S + P L + + LKL L +S LK++ L + + DE
Sbjct: 117 NSSVV-----LPRSLYTCCRMLVTLKLNN--AVLVDATSSFSFPSLKTLSLVSMKFPGDE 169
Query: 195 MVSNLISGCVNLVFLGLEYC----YGMKDVKICSLKITVLHLNYFTC--EDGSLEISCPN 248
++ L+S C L L ++ C V++ SLK VLH D I P+
Sbjct: 170 LIKMLLSNCPVLEDLVVKRCPYDNVTTFTVRVSSLKCLVLHETELASINADCGFVIDTPS 229
Query: 249 LVSLEM----IGFHVEKYDFKNLSGLVEAGVAFLHMWKYYRHWSQVMRFLLHVKRLTV 302
L L++ GF V + N++ +V+A V Y H Q+M + VKRL V
Sbjct: 230 LECLDIEDGRGGFCVIE---NNMTKVVKANVC-----NSYVHTQQLMGSISSVKRLYV 279
>AT1G56400.1 | Symbols: | F-box family protein |
chr1:21111805-21113621 REVERSE
Length = 479
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 124/264 (46%), Gaps = 25/264 (9%)
Query: 17 LNDLPEEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLSSLNFPYSS-----VSTATSIP 71
L++LP+ +L I+S LS K I+TS+L ++WRYL + +++F + VS S
Sbjct: 15 LSNLPDVLLIMIISCLSFKECIRTSVLAKRWRYLCRETRNISFKETEYVDHFVSDKRSKR 74
Query: 72 ARSLADFINQTLIRRPSTSPPLQKFHLQFDFKEHLYSSHVDSWVRYAILHHVQQLELDFY 131
S A ++ Q + R ++ + F ++ V+S + +A+ V+ L LDF
Sbjct: 75 V-SFAAYMCQWVSRYHGRY--IETLEIYFSIPSDFLAA-VESLIEFAVSRQVKNLVLDFS 130
Query: 132 ISREFQTSDIESDYDF-----PFFLLKNGNVKILKLTKCRITLPTNVASMGLSFLKSVFL 186
TS S YD+ P + ++ LK+ C P+ ++ L + + +
Sbjct: 131 DPSWISTS-CASRYDYVCVQLPVCVYSLTTLESLKIYSCGFD-PSKFSNSRLP--RKLSI 186
Query: 187 DQVYLSDEMVSNLISGCVNLVFLGLEYCYGMKDVKICSLKITVLHLNYFTCEDGSLEISC 246
+ L+D V +L+ L L + YC+G ++I ++ + + +C+ S + C
Sbjct: 187 GWIKLTD--VESLLLNSPTLKSLSINYCWG---IEIRNIAGDMKEFVFESCDFSSFMVCC 241
Query: 247 PNLVSLEMIGF--HVEKYDFKNLS 268
+L ++E+ + + +D K ++
Sbjct: 242 FDLPNVEIFKYSGQILSFDVKRMN 265
>AT5G56410.1 | Symbols: | F-box family protein |
chr5:22848508-22850331 REVERSE
Length = 503
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 95/211 (45%), Gaps = 28/211 (13%)
Query: 22 EEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLSSLNF-----------PYSSVSTATSI 70
+E+L ILSFL TK+A+ TS+L ++W++LW +L L + S S SI
Sbjct: 10 DELLVKILSFLPTKAAVTTSILSKQWKFLWMRLPKLEYHDDIKIYILYMRGGSRSRTDSI 69
Query: 71 ---PARSLADFINQTLIRRPSTSPPLQKFHLQFDFKEHLYSSHVDSWVRYAILHHVQQLE 127
++ + FI++ L +SP ++ L + E ++ WV A+ V++L
Sbjct: 70 LLEKSQRMWRFIDKNLPLH--SSPVIESLRLTI-YNELFQPESINLWVEIAVSRCVKEL- 125
Query: 128 LDFYISREFQTSDIESDYDFPFFLLKNGNVKILKLTKCRITLPTNVASM-GLSFLKSVFL 186
S F + D P L ++ LKL R + +V + L LK++ L
Sbjct: 126 -----SVRFSPFKGKRDALLPTTLYTCKSLVTLKL---RENILVDVPHVFCLPSLKTLHL 177
Query: 187 DQV-YLSDEMVSNLISGCVNLVFLGLEYCYG 216
V Y +E + L+S C L L +E G
Sbjct: 178 SHVTYADEESLQRLLSNCFVLEDLVVERRVG 208
>AT2G29930.3 | Symbols: | F-box family protein |
chr2:12756457-12758087 REVERSE
Length = 459
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 88/207 (42%), Gaps = 38/207 (18%)
Query: 17 LNDLPEEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLSS--LNFPYSSVSTATSIPARS 74
++ LP+EIL ILS T A TS+L ++WR L + + LN Y + +
Sbjct: 14 ISSLPDEILGKILSLFCTNRAACTSVLSKRWRNLLELVDNLDLNDAYGN--------HQY 65
Query: 75 LADFINQTLIRRPSTSPPLQKFHLQFDFKEHLYSSHVDSWVRYAILHHVQQLELD----F 130
DF+++TL S S +++F L F H +S V+SW+R L L+
Sbjct: 66 FCDFVDRTLALL-SNSTTVKRFSLNCAF--HNDASRVNSWIRTVFDRGFLDLHLETAHMH 122
Query: 131 YISREFQTSDIESDYDFPFFLLKNGNVKILKLTKCRITLPTNVASMGLSF---LKSVFLD 187
I EF TS+ +L+LT C G F LKS+ L
Sbjct: 123 RIDTEFFTSNT-----------------LLELTICGGFYAEGRLPPGRVFFPALKSLSLV 165
Query: 188 QVYLSDE-MVSNLISGCVNLVFLGLEY 213
V +D M N ISGC L L L Y
Sbjct: 166 SVEFTDTLMYQNFISGCPVLEELFLHY 192
>AT2G29930.1 | Symbols: | F-box family protein |
chr2:12756457-12758087 REVERSE
Length = 459
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 88/207 (42%), Gaps = 38/207 (18%)
Query: 17 LNDLPEEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLSS--LNFPYSSVSTATSIPARS 74
++ LP+EIL ILS T A TS+L ++WR L + + LN Y + +
Sbjct: 14 ISSLPDEILGKILSLFCTNRAACTSVLSKRWRNLLELVDNLDLNDAYGN--------HQY 65
Query: 75 LADFINQTLIRRPSTSPPLQKFHLQFDFKEHLYSSHVDSWVRYAILHHVQQLELD----F 130
DF+++TL S S +++F L F H +S V+SW+R L L+
Sbjct: 66 FCDFVDRTLALL-SNSTTVKRFSLNCAF--HNDASRVNSWIRTVFDRGFLDLHLETAHMH 122
Query: 131 YISREFQTSDIESDYDFPFFLLKNGNVKILKLTKCRITLPTNVASMGLSF---LKSVFLD 187
I EF TS+ +L+LT C G F LKS+ L
Sbjct: 123 RIDTEFFTSNT-----------------LLELTICGGFYAEGRLPPGRVFFPALKSLSLV 165
Query: 188 QVYLSDE-MVSNLISGCVNLVFLGLEY 213
V +D M N ISGC L L L Y
Sbjct: 166 SVEFTDTLMYQNFISGCPVLEELFLHY 192
>AT5G38565.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown;
LOCATED IN: cellular_component unknown; CONTAINS
InterPro DOMAIN/s: FBD (InterPro:IPR013596),
Cyclin-like F-box (InterPro:IPR001810), FBD-like
(InterPro:IPR006566); BEST Arabidopsis thaliana protein
match is: F-box family protein (TAIR:AT5G38570.1); Has
991 Blast hits to 931 proteins in 8 species: Archae -
0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 991;
Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
| chr5:15444571-15446009 REVERSE
Length = 349
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 30/42 (71%)
Query: 18 NDLPEEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLSSLNF 59
N LP+++L ILSF+ TK A+ TS+L ++W +LW L L+F
Sbjct: 5 NGLPDDVLVKILSFVPTKVAVSTSILSKRWEFLWMWLPRLDF 46
>AT1G48400.1 | Symbols: | F-box family protein |
chr1:17882136-17883855 REVERSE
Length = 513
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 60/115 (52%), Gaps = 11/115 (9%)
Query: 7 ATVFSAVDHSLNDLPEEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLSSLNFP-----Y 61
A + ++ S+++LP+EIL ILS L TK A TS+L ++WR L + +L F Y
Sbjct: 2 AMMRTSPRDSISNLPDEILGKILSLLPTKVAASTSVLSKRWRNLLGLVDNLCFDESMVVY 61
Query: 62 SSVSTATSIPARSLADFINQTLIRRPSTSPPLQKFHLQFDFKEHLYSSHVDSWVR 116
+ TS R DF+++T ++ ++KF L +K Y+ VD VR
Sbjct: 62 PNEEEETSGSLR-FCDFVDKTFALLSNSH--IKKFSLSRVYK---YNDDVDGMVR 110
>AT5G40050.1 | Symbols: | F-box family protein |
chr5:16032083-16033551 REVERSE
Length = 415
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 59/124 (47%), Gaps = 13/124 (10%)
Query: 20 LPEEILTHILSFLSTKSAIQTSLLCRKWRYLWCQL-----------SSLNFPYSSVSTAT 68
LP+E+L+HILSFL TK A TS+L ++WR L+ + + L +P
Sbjct: 19 LPDELLSHILSFLPTKRAASTSILSKRWRTLFPLMNHLCASLYLDDTDLLYPERQTEEEY 78
Query: 69 SIPARSLADFINQTLIRRPSTSPPLQKFHLQFDFKEHLYSSHVDSWVRYAILHHVQQLEL 128
+ S +F+++TL + S L+KF L ++ + + A+ V LEL
Sbjct: 79 YVIHNSFRNFVDKTLSGCNNNS--LKKFSLTYEDDDVQRMCLTTGMMSKALEQGVSDLEL 136
Query: 129 DFYI 132
Y+
Sbjct: 137 YIYM 140