Jatropha Genome Database

JcCA0307371.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0307371.10 + phase: 0 
         (327 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G26930.1 | Symbols: ATCDPMEK, PDE277, ISPE | ATCDPMEK (4-(CYT...   442   e-124

>AT2G26930.1 | Symbols: ATCDPMEK, PDE277, ISPE | ATCDPMEK
           (4-(CYTIDINE 5'-PHOSPHO)-2-C-METHYL-D-ERITHRITOL
           KINASE); 4-(cytidine
           5'-diphospho)-2-C-methyl-D-erythritol kinase |
           chr2:11491829-11494229 REVERSE
          Length = 383

 Score =  442 bits (1137), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 215/282 (76%), Positives = 245/282 (86%)

Query: 45  VKATKKQLEIVYDPDERLNKLADDVDKNAPLSRLTLFSPCKINVFLRITSKREDGYHDLA 104
           VKA++KQ+EIV+DPDERLNK+ DDVDK APLSRL LFSPCKINVFLRIT KREDG+HDLA
Sbjct: 40  VKASRKQVEIVFDPDERLNKIGDDVDKEAPLSRLKLFSPCKINVFLRITGKREDGFHDLA 99

Query: 105 SLFHVISLGDTIKFSLSPSKSKDRLSTNVSGVPLDERNLVIKALNLYRKKTGTDNFFWIH 164
           SLFHVISLGDTIKFSLSPSKSKDRLSTNV GVP+D RNL+IKALNLYRKKTG++ FFWIH
Sbjct: 100 SLFHVISLGDTIKFSLSPSKSKDRLSTNVQGVPVDGRNLIIKALNLYRKKTGSNRFFWIH 159

Query: 165 LDKKVPXXXXXXXXXXXXXXXXWAANQFSGGIATENDLLEWSSEIGSDISFFFSHGAAYC 224
           LDKKVP                WAAN+ +GG+ TEN+L +WSSEIGSDI FFFSHGAAYC
Sbjct: 160 LDKKVPTGAGLGGGSSNAATALWAANELNGGLVTENELQDWSSEIGSDIPFFFSHGAAYC 219

Query: 225 TGRGEIVQDIPSPVPLDIPMVLIKPQEACPTGEVYKRFRLDQTSQVDPLTLLEKISNSGI 284
           TGRGEIVQD+P P PLD+PMVLIKP+EAC T EVYKR RLDQTS ++PLTLLE ++++G+
Sbjct: 220 TGRGEIVQDLPPPFPLDLPMVLIKPREACSTAEVYKRLRLDQTSNINPLTLLENVTSNGV 279

Query: 285 SQDVCINDLEPPAFEVLPSLKRLKQRIMAASRGQYDAVFMSG 326
           SQ +C+NDLEPPAF VLPSLKRLKQRI+A+ RG+YDAVFMSG
Sbjct: 280 SQSICVNDLEPPAFSVLPSLKRLKQRIIASGRGEYDAVFMSG 321