Jatropha Genome Database

JcCA0306831.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0306831.10 - phase: 0 /pseudo/partial
         (151 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G58970.1 | Symbols:  | magnesium transporter CorA-like family...   124   2e-29
AT5G09690.4 | Symbols:  | magnesium transporter CorA-like family...    90   5e-19
AT5G09690.2 | Symbols:  | magnesium transporter CorA-like family...    89   1e-18
AT5G09690.1 | Symbols:  | magnesium transporter CorA-like family...    89   1e-18
AT4G28580.1 | Symbols:  | magnesium transporter CorA-like family...    74   5e-14
AT5G64560.1 | Symbols:  | magnesium transporter CorA-like family...    73   6e-14
AT1G80900.1 | Symbols: ATMGT1, MGT1 | magnesium transporter CorA...    69   1e-12
AT1G16010.1 | Symbols:  | magnesium transporter CorA-like family...    68   2e-12
AT1G16010.2 | Symbols:  | magnesium transporter CorA-like family...    68   2e-12
AT5G64560.2 | Symbols:  | magnesium transporter CorA-like family...    62   2e-10
AT3G19640.1 | Symbols:  | magnesium transporter CorA-like family...    51   2e-07

>AT3G58970.1 | Symbols:  | magnesium transporter CorA-like family
           protein | chr3:21789659-21791163 REVERSE
          Length = 436

 Score =  124 bits (311), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 71/187 (37%), Positives = 96/187 (51%), Gaps = 37/187 (19%)

Query: 1   VRDVIEHMLDDDEDMANLYLTRKLIQVQELEAMFGGA*HSNRTTTINAQAPHLHRLGSK- 59
           VRD +EH+LDD+EDMA+LYLTRK IQ Q+ EA+  G   SN          +LHRL S  
Sbjct: 249 VRDELEHLLDDNEDMADLYLTRKWIQNQQTEAILAGT-ASNSIALPAHNTSNLHRLTSNR 307

Query: 60  -----------------------------------MSVREYINVAEDNVNVQLDDERNEL 84
                                              ++VREYI+  ED VN+QLD++RNEL
Sbjct: 308 SASMVTSNTEEDDVEDLEMLLEAYFMQLDGMRNKILTVREYIDDTEDYVNIQLDNQRNEL 367

Query: 85  IQLQLMLKSSVVSISLQLAICGALSMNFSCVWYEMHGIFGHTVSGIVIVGFSFFMFILRY 144
           IQLQL L  +  +I+ +  +     MN  C  Y +HG+FG+ V  +  +    FM  L Y
Sbjct: 368 IQLQLTLTIASFAIAAETLLASLFGMNIPCPLYSIHGVFGYFVWSVTALCIVLFMVTLGY 427

Query: 145 AKWKNLV 151
           A+WK L+
Sbjct: 428 ARWKKLL 434


>AT5G09690.4 | Symbols:  | magnesium transporter CorA-like family
           protein (MRS2-7) | chr5:3000990-3003169 REVERSE
          Length = 371

 Score = 90.1 bits (222), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 61/169 (36%), Positives = 86/169 (50%), Gaps = 19/169 (11%)

Query: 1   VRDVIEHMLDDDEDMANLYLTRKLIQVQELEAMFGGA*HSNRTTTINAQAPHLHRLGSKM 60
           VRD +E +LDDD DMA+LYLTRKL+      ++         + TI +      R+ S +
Sbjct: 202 VRDELEQLLDDDGDMADLYLTRKLVGASSSVSVSDEPIWYPTSPTIGSMISRASRV-SLV 260

Query: 61  SVR-----------------EYINVAEDNVNVQLDDERNELIQLQLMLKSSVVSISLQLA 103
           +VR                 EYI+  ED +N+QLD+ RN+LIQL+LML +  V +S+   
Sbjct: 261 TVRGDDETDVEELEMLLELREYIDDTEDYINIQLDNHRNQLIQLELMLSAGTVCVSVYSM 320

Query: 104 ICGALSMNFSCVWYEMHG-IFGHTVSGIVIVGFSFFMFILRYAKWKNLV 151
           I G   MN    W   HG IF   VS         F+ IL YA+++ L+
Sbjct: 321 IAGIFGMNIPNTWNHDHGYIFKWVVSLTGTFCIVLFVIILSYARFRGLI 369


>AT5G09690.2 | Symbols:  | magnesium transporter CorA-like family
           protein (MRS2-7) | chr5:3000990-3003415 REVERSE
          Length = 397

 Score = 89.0 bits (219), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 60/183 (32%), Positives = 83/183 (45%), Gaps = 32/183 (17%)

Query: 1   VRDVIEHMLDDDEDMANLYLTRKLIQVQELEAMFGGA*HSNRTTTINAQAPHLHR----- 55
           VRD +E +LDDD DMA+LYLTRKL+      ++         + TI +      R     
Sbjct: 213 VRDELEQLLDDDGDMADLYLTRKLVGASSSVSVSDEPIWYPTSPTIGSMISRASRVSLVT 272

Query: 56  --------------------------LGSKMSVREYINVAEDNVNVQLDDERNELIQLQL 89
                                     L     +REYI+  ED +N+QLD+ RN+LIQL+L
Sbjct: 273 VRGDDETDVEELEMLLEAYFMQIDSTLNKLTELREYIDDTEDYINIQLDNHRNQLIQLEL 332

Query: 90  MLKSSVVSISLQLAICGALSMNFSCVWYEMHG-IFGHTVSGIVIVGFSFFMFILRYAKWK 148
           ML +  V +S+   I G   MN    W   HG IF   VS         F+ IL YA+++
Sbjct: 333 MLSAGTVCVSVYSMIAGIFGMNIPNTWNHDHGYIFKWVVSLTGTFCIVLFVIILSYARFR 392

Query: 149 NLV 151
            L+
Sbjct: 393 GLI 395


>AT5G09690.1 | Symbols:  | magnesium transporter CorA-like family
           protein (MRS2-7) | chr5:3000990-3003169 REVERSE
          Length = 386

 Score = 89.0 bits (219), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 60/183 (32%), Positives = 83/183 (45%), Gaps = 32/183 (17%)

Query: 1   VRDVIEHMLDDDEDMANLYLTRKLIQVQELEAMFGGA*HSNRTTTINAQAPHLHR----- 55
           VRD +E +LDDD DMA+LYLTRKL+      ++         + TI +      R     
Sbjct: 202 VRDELEQLLDDDGDMADLYLTRKLVGASSSVSVSDEPIWYPTSPTIGSMISRASRVSLVT 261

Query: 56  --------------------------LGSKMSVREYINVAEDNVNVQLDDERNELIQLQL 89
                                     L     +REYI+  ED +N+QLD+ RN+LIQL+L
Sbjct: 262 VRGDDETDVEELEMLLEAYFMQIDSTLNKLTELREYIDDTEDYINIQLDNHRNQLIQLEL 321

Query: 90  MLKSSVVSISLQLAICGALSMNFSCVWYEMHG-IFGHTVSGIVIVGFSFFMFILRYAKWK 148
           ML +  V +S+   I G   MN    W   HG IF   VS         F+ IL YA+++
Sbjct: 322 MLSAGTVCVSVYSMIAGIFGMNIPNTWNHDHGYIFKWVVSLTGTFCIVLFVIILSYARFR 381

Query: 149 NLV 151
            L+
Sbjct: 382 GLI 384


>AT4G28580.1 | Symbols:  | magnesium transporter CorA-like family
           protein (MRS2-6) | chr4:14123489-14125003 FORWARD
          Length = 408

 Score = 73.6 bits (179), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 80/175 (45%), Gaps = 24/175 (13%)

Query: 1   VRDVIEHMLDDDEDMANLYLTRKLIQVQELEAMFGGA*H--------SNRTTT------- 45
           VRD IEH LDD EDM +LYLTRK IQ Q+ EA               SNR +T       
Sbjct: 233 VRDEIEHFLDDKEDMEDLYLTRKWIQNQQTEAASNSIVSQPNLQRHTSNRISTSMVTEED 292

Query: 46  --------INAQAPHLHRLGSK-MSVREYINVAEDNVNVQLDDERNELIQLQLMLKSSVV 96
                   + A    L  + +K + ++E+I+  E  V +  +  RN LI L +++     
Sbjct: 293 DIDDMEMLLEAYFMQLEGMRNKILLMKEHIDSTEAYVKILQNSRRNGLIHLMMLVNIGNY 352

Query: 97  SISLQLAICGALSMNFSCVWYEMHGIFGHTVSGIVIVGFSFFMFILRYAKWKNLV 151
           +I+    +     MN     Y    IFG+ V  +V +    F+  + YAKWK L+
Sbjct: 353 AITAGTVVVNLFGMNIPIGLYSTPDIFGYVVWAVVALCIVLFIVTVGYAKWKKLL 407


>AT5G64560.1 | Symbols:  | magnesium transporter CorA-like family
           protein (MRS2-2) | chr5:25807025-25809395 REVERSE
          Length = 394

 Score = 73.2 bits (178), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 39/100 (39%), Positives = 60/100 (60%), Gaps = 4/100 (4%)

Query: 53  LHRLGSKMSVREYINVAEDNVNVQLDDERNELIQLQLMLKSSVVSISLQLAICGALSMNF 112
           L+RL    ++REYI+  ED +N+QLD+ RN+LIQL+L+L S  V +S+   + G   MN 
Sbjct: 296 LNRL---TTLREYIDDTEDYINIQLDNHRNQLIQLELVLSSGTVCLSMYSLVAGIFGMNI 352

Query: 113 SCVWYEMHG-IFGHTVSGIVIVGFSFFMFILRYAKWKNLV 151
              W + HG +F + V     +    F+ I+ YA++K LV
Sbjct: 353 PYTWNDGHGYMFKYVVGLTGTLCVVVFVIIMSYARYKGLV 392


>AT1G80900.1 | Symbols: ATMGT1, MGT1 | magnesium transporter
           CorA-like family protein (MGT1) (MRS2) |
           chr1:30398289-30399870 REVERSE
          Length = 443

 Score = 68.6 bits (166), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 51/203 (25%), Positives = 88/203 (43%), Gaps = 54/203 (26%)

Query: 1   VRDVIEHMLDDDEDMANLYLTRKLIQVQELEAMFG----GA*HSNRTTTINAQ------A 50
           VRD IE ++DDD DMA +YLT K  +++   +++G        +N   +++A        
Sbjct: 241 VRDEIEQLMDDDGDMAEMYLTEKKKRMEG--SLYGDQSLPVYRTNDCFSLSAPVSPVSSP 298

Query: 51  PHLHRLGSKMSV------------------------------------------REYINV 68
           P   RL   +S+                                          +EYI+ 
Sbjct: 299 PESRRLEKSLSIVRSRHDSARSSEDATENIEELEMLLEAYFVVIDSTLNKLTSLKEYIDD 358

Query: 69  AEDNVNVQLDDERNELIQLQLMLKSSVVSISLQLAICGALSMNFSCVWYEMHGIFGHTVS 128
            ED +N+QLD+ RN+LIQ +L+L ++   +++   + G   MNF   ++E  G F   ++
Sbjct: 359 TEDFINIQLDNVRNQLIQFELLLTTATFVVAIFGVVAGIFGMNFEIDFFEKPGAFKWVLA 418

Query: 129 GIVIVGFSFFMFILRYAKWKNLV 151
              + G   F+  L Y K + L+
Sbjct: 419 ITGVCGLVVFLAFLWYYKRRRLM 441


>AT1G16010.1 | Symbols:  | magnesium transporter CorA-like family
           protein (MRS2-1) | chr1:5495462-5497082 REVERSE
          Length = 442

 Score = 68.2 bits (165), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/202 (25%), Positives = 87/202 (43%), Gaps = 53/202 (26%)

Query: 1   VRDVIEHMLDDDEDMANLYLTRKLIQVQELEAMFGG----A*HSNRTTTINAQ------A 50
           VRD IE ++DDD DMA +YLT K  +++   +M+G        SN   +++A        
Sbjct: 241 VRDEIEQLMDDDGDMAEMYLTEKKRRMEG--SMYGDQSLLGYRSNDGLSVSAPVSPVSSP 298

Query: 51  PHLHRLGSKMSV-----------------------------------------REYINVA 69
           P   RL   +S+                                         +EYI+  
Sbjct: 299 PDSRRLDKSLSIARSRHDSARSSEGAENIEELEMLLEAYFVVIDSTLNKLTSLKEYIDDT 358

Query: 70  EDNVNVQLDDERNELIQLQLMLKSSVVSISLQLAICGALSMNFSCVWYEMHGIFGHTVSG 129
           ED +N+QLD+ RN+LIQ +L+L ++   +++   + G   MNF   ++   G F   +  
Sbjct: 359 EDFINIQLDNVRNQLIQFELLLTTATFVVAIFGVVAGIFGMNFEIDFFNQPGAFRWVLII 418

Query: 130 IVIVGFSFFMFILRYAKWKNLV 151
             + GF  F   + + K++ L+
Sbjct: 419 TGVCGFVIFSAFVWFFKYRRLM 440


>AT1G16010.2 | Symbols:  | magnesium transporter CorA-like family
           protein (MRS2-1) | chr1:5495462-5497082 REVERSE
          Length = 442

 Score = 68.2 bits (165), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/202 (25%), Positives = 87/202 (43%), Gaps = 53/202 (26%)

Query: 1   VRDVIEHMLDDDEDMANLYLTRKLIQVQELEAMFGG----A*HSNRTTTINAQ------A 50
           VRD IE ++DDD DMA +YLT K  +++   +M+G        SN   +++A        
Sbjct: 241 VRDEIEQLMDDDGDMAEMYLTEKKRRMEG--SMYGDQSLLGYRSNDGLSVSAPVSPVSSP 298

Query: 51  PHLHRLGSKMSV-----------------------------------------REYINVA 69
           P   RL   +S+                                         +EYI+  
Sbjct: 299 PDSRRLDKSLSIARSRHDSARSSEGAENIEELEMLLEAYFVVIDSTLNKLTSLKEYIDDT 358

Query: 70  EDNVNVQLDDERNELIQLQLMLKSSVVSISLQLAICGALSMNFSCVWYEMHGIFGHTVSG 129
           ED +N+QLD+ RN+LIQ +L+L ++   +++   + G   MNF   ++   G F   +  
Sbjct: 359 EDFINIQLDNVRNQLIQFELLLTTATFVVAIFGVVAGIFGMNFEIDFFNQPGAFRWVLII 418

Query: 130 IVIVGFSFFMFILRYAKWKNLV 151
             + GF  F   + + K++ L+
Sbjct: 419 TGVCGFVIFSAFVWFFKYRRLM 440


>AT5G64560.2 | Symbols:  | magnesium transporter CorA-like family
           protein (MRS2-2) | chr5:25807163-25809395 REVERSE
          Length = 378

 Score = 61.6 bits (148), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 30/69 (43%), Positives = 44/69 (63%), Gaps = 3/69 (4%)

Query: 53  LHRLGSKMSVREYINVAEDNVNVQLDDERNELIQLQLMLKSSVVSISLQLAICGALSMNF 112
           L+RL    ++REYI+  ED +N+QLD+ RN+LIQL+L+L S  V +S+   + G   MN 
Sbjct: 296 LNRL---TTLREYIDDTEDYINIQLDNHRNQLIQLELVLSSGTVCLSMYSLVAGIFGMNI 352

Query: 113 SCVWYEMHG 121
              W + HG
Sbjct: 353 PYTWNDGHG 361


>AT3G19640.1 | Symbols:  | magnesium transporter CorA-like family
           protein (MRS2-3) | chr3:6820969-6823104 FORWARD
          Length = 484

 Score = 51.2 bits (121), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/95 (30%), Positives = 54/95 (56%), Gaps = 4/95 (4%)

Query: 61  SVREYINVAEDNVNVQLDDERNELIQLQLMLKSSVVSISLQLAICGALSMNFSCVWY--E 118
           ++REY++  ED +N+ LDD++N L+Q+ +ML ++ + +S  +A+ G   MN +   +   
Sbjct: 389 TLREYVDDTEDYINIMLDDKQNHLLQMGVMLTTATLVMSAFIAVAGVFGMNITIELFTDN 448

Query: 119 MHGI--FGHTVSGIVIVGFSFFMFILRYAKWKNLV 151
            HG   F  TV G  I     ++  + + K+K L+
Sbjct: 449 KHGPSRFIWTVIGGSIGSICLYVGAIGWCKYKRLL 483