Jatropha Genome Database
- JcCA0305711.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0305711.10 + phase: 0
(243 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G27730.1 | Symbols: STZ, ZAT10 | STZ (salt tolerance zinc fin... 137 8e-33
AT5G04340.1 | Symbols: C2H2, CZF2, ZAT6 | ZAT6 (ZINC FINGER OF A... 127 7e-30
AT3G19580.2 | Symbols: AZF2 | AZF2 (ARABIDOPSIS ZINC-FINGER PROT... 121 4e-28
AT3G19580.1 | Symbols: AZF2 | AZF2 (ARABIDOPSIS ZINC-FINGER PROT... 121 4e-28
AT5G43170.1 | Symbols: AZF3 | AZF3 (ARABIDOPSIS ZINC-FINGER PROT... 111 4e-25
AT3G49930.1 | Symbols: | zinc finger (C2H2 type) family protein... 108 2e-24
AT5G67450.1 | Symbols: AZF1 | AZF1 (ARABIDOPSIS ZINC-FINGER PROT... 105 2e-23
AT1G49900.1 | Symbols: | zinc finger (C2H2 type) family protein... 81 5e-16
AT2G28200.1 | Symbols: | nucleic acid binding / transcription f... 68 6e-12
AT5G56200.1 | Symbols: | zinc finger (C2H2 type) family protein... 63 2e-10
>AT1G27730.1 | Symbols: STZ, ZAT10 | STZ (salt tolerance zinc
finger); nucleic acid binding / transcription factor/
transcription repressor/ zinc ion binding |
chr1:9648302-9648985 REVERSE
Length = 227
Score = 137 bits (344), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 93/244 (38%), Positives = 116/244 (47%), Gaps = 33/244 (13%)
Query: 1 MALEALNSPTTATPFN--YEDT--------WTKRKRSKRPRGE---SPPTEEEYLALCLI 47
MALEAL SP A+P +ED+ WTK KRSKR R + TEEEYLA CL+
Sbjct: 1 MALEALTSPRLASPIPPLFEDSSVFHGVEHWTKGKRSKRSRSDFHHQNLTEEEYLAFCLM 60
Query: 48 MLARGGSTSPTAEEIASTSXXXXXXXALNLSYKCTVCNKAFPSYQALGGHKXXXXXXXXX 107
+LAR P + LSYKC+VC+K F SYQALGGHK
Sbjct: 61 LLARDNRQPPPPPAVE------------KLSYKCSVCDKTFSSYQALGGHK----ASHRK 104
Query: 108 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHECSICHKTFPTGQALGGHKRRHYEGPVG 167
H C+IC+K+FP+GQALGGHKR HYE G
Sbjct: 105 NLSQTLSGGGDDHSTSSATTTSAVTTGSGKSHVCTICNKSFPSGQALGGHKRCHYE---G 161
Query: 168 GHNHSSSAVTXXXXXXXXXXXXXXXXFEFDLNLPALPELWPGNREQEVESPLPGKKPRLS 227
+N ++S+V+ FDLN+P +PE N + EV SP+P KKPR
Sbjct: 162 NNNINTSSVSNSEGAGSTSHVSSSHR-GFDLNIPPIPEFSMVNGDDEVMSPMPAKKPRFD 220
Query: 228 LLLK 231
+K
Sbjct: 221 FPVK 224
>AT5G04340.1 | Symbols: C2H2, CZF2, ZAT6 | ZAT6 (ZINC FINGER OF
ARABIDOPSIS THALIANA 6); nucleic acid binding /
transcription factor/ zinc ion binding |
chr5:1216321-1217037 REVERSE
Length = 238
Score = 127 bits (319), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 91/252 (36%), Positives = 114/252 (45%), Gaps = 42/252 (16%)
Query: 1 MALEALNSPTTATPF--NYEDT-----WTKRKRSKRPRGE---SPPTEEEYLALCLIMLA 50
MALE L SP ++P ++D+ +K KRSKR R E TE+EY+ALCL++LA
Sbjct: 1 MALETLTSPRLSSPMPTLFQDSALGFHGSKGKRSKRSRSEFDRQSLTEDEYIALCLMLLA 60
Query: 51 RGGSTSPTAEEIASTSXXXXXXXALNLSYKCTVCNKAFPSYQALGGHKXXXXXXXXXXXX 110
R G + + +S+S YKC+VC+KAF SYQALGGHK
Sbjct: 61 RDGDRNRDLDLPSSSSSPPLLPPLPTPIYKCSVCDKAFSSYQALGGHK-ASHRKSFSLTQ 119
Query: 111 XXXXXXXXXXXXXXXXXXXXXXXXXXXXHECSICHKTFPTGQALGGHKRRHYEG------ 164
H CSICHK+F TGQALGGHKR HYEG
Sbjct: 120 SAGGDELSTSSAITTSGISGGGGGSVKSHVCSICHKSFATGQALGGHKRCHYEGKNGGGV 179
Query: 165 --------PVGGHNHSSSAVTXXXXXXXXXXXXXXXXFEFDLNLPALPELWPGNREQEVE 216
VG +H SS FDLN+P +PE N ++EV
Sbjct: 180 SSSVSNSEDVGSTSHVSSGHRG-----------------FDLNIPPIPEFSMVNGDEEVM 222
Query: 217 SPLPGKKPRLSL 228
SP+P KK R
Sbjct: 223 SPMPAKKLRFDF 234
>AT3G19580.2 | Symbols: AZF2 | AZF2 (ARABIDOPSIS ZINC-FINGER PROTEIN
2); DNA binding / nucleic acid binding / transcription
factor/ transcription repressor/ zinc ion binding |
chr3:6803293-6804114 REVERSE
Length = 273
Score = 121 bits (303), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 102/276 (36%), Positives = 124/276 (44%), Gaps = 40/276 (14%)
Query: 1 MALEALNSPTTA-----------TPFNYEDTWTKRKRSKRPRGESPP------------- 36
MALEA+N+PT++ + + W KRKRSKR R SP
Sbjct: 1 MALEAMNTPTSSFTRIETKEDLMNDAVFIEPWLKRKRSKRQRSHSPSSSSSSPPRSRPKS 60
Query: 37 -----TEEEYLALCLIMLARGGSTSPTAEEIASTSXXXXXXXALNLSYKCTVCNKAFPSY 91
TEEEYLALCL+MLA+ + + + + NL YKC VC KAFPSY
Sbjct: 61 QNQDLTEEEYLALCLLMLAKDQPSQTRFHQ--QSQSLTPPPESKNLPYKCNVCEKAFPSY 118
Query: 92 QALGGHKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHECSICHKTFPTG 151
QALGGHK HECSICHK FPTG
Sbjct: 119 QALGGHKASHRIKPPTVISTTADDSTAPTISIVAGEKHPIAASGKI-HECSICHKVFPTG 177
Query: 152 QALGGHKRRHYEGPVGGHNHSSSAVTXXXXXXXXXXXXXXXXFEF-DLNLPALPELWPGN 210
QALGGHKR HYEG +GG S F DLNLPALPEL +
Sbjct: 178 QALGGHKRCHYEGNLGGGGGGGSKSISHSGSVSSTVSEERSHRGFIDLNLPALPELSLHH 237
Query: 211 R---EQEVESPLPGKKPRL----SLLLKQEKTEMKV 239
++E+ SPL GKKP L ++K+E +K+
Sbjct: 238 NPIVDEEILSPLTGKKPLLLTDHDQVIKKEDLSLKI 273
>AT3G19580.1 | Symbols: AZF2 | AZF2 (ARABIDOPSIS ZINC-FINGER PROTEIN
2); DNA binding / nucleic acid binding / transcription
factor/ transcription repressor/ zinc ion binding |
chr3:6803293-6804114 REVERSE
Length = 273
Score = 121 bits (303), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 102/276 (36%), Positives = 124/276 (44%), Gaps = 40/276 (14%)
Query: 1 MALEALNSPTTA-----------TPFNYEDTWTKRKRSKRPRGESPP------------- 36
MALEA+N+PT++ + + W KRKRSKR R SP
Sbjct: 1 MALEAMNTPTSSFTRIETKEDLMNDAVFIEPWLKRKRSKRQRSHSPSSSSSSPPRSRPKS 60
Query: 37 -----TEEEYLALCLIMLARGGSTSPTAEEIASTSXXXXXXXALNLSYKCTVCNKAFPSY 91
TEEEYLALCL+MLA+ + + + + NL YKC VC KAFPSY
Sbjct: 61 QNQDLTEEEYLALCLLMLAKDQPSQTRFHQ--QSQSLTPPPESKNLPYKCNVCEKAFPSY 118
Query: 92 QALGGHKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHECSICHKTFPTG 151
QALGGHK HECSICHK FPTG
Sbjct: 119 QALGGHKASHRIKPPTVISTTADDSTAPTISIVAGEKHPIAASGKI-HECSICHKVFPTG 177
Query: 152 QALGGHKRRHYEGPVGGHNHSSSAVTXXXXXXXXXXXXXXXXFEF-DLNLPALPELWPGN 210
QALGGHKR HYEG +GG S F DLNLPALPEL +
Sbjct: 178 QALGGHKRCHYEGNLGGGGGGGSKSISHSGSVSSTVSEERSHRGFIDLNLPALPELSLHH 237
Query: 211 R---EQEVESPLPGKKPRL----SLLLKQEKTEMKV 239
++E+ SPL GKKP L ++K+E +K+
Sbjct: 238 NPIVDEEILSPLTGKKPLLLTDHDQVIKKEDLSLKI 273
>AT5G43170.1 | Symbols: AZF3 | AZF3 (ARABIDOPSIS ZINC-FINGER PROTEIN
3); DNA binding / nucleic acid binding / transcription
factor/ transcription repressor/ zinc ion binding |
chr5:17331050-17331631 REVERSE
Length = 193
Score = 111 bits (278), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 85/234 (36%), Positives = 99/234 (42%), Gaps = 50/234 (21%)
Query: 1 MALEALNSPTTATP---FNYEDTWTK-RKRSKRPRGE----SPPTEEEYLALCLIMLARG 52
MALEALNSP FN + WTK +KRSKR R + TEEEYLA CL++LAR
Sbjct: 1 MALEALNSPRLVEDPLRFNGVEQWTKCKKRSKRSRSDLHHNHRLTEEEYLAFCLMLLARD 60
Query: 53 GSTSPTAEEIASTSXXXXXXXALNLSYKCTVCNKAFPSYQALGGHKXXXXXXXXXXXXXX 112
G + A SYKC VC K F SYQALGGHK
Sbjct: 61 GGDLDSV------------TVAEKPSYKCGVCYKTFSSYQALGGHK-------------- 94
Query: 113 XXXXXXXXXXXXXXXXXXXXXXXXXXHECSICHKTFPTGQALGGHKRRHYEGPVGGHNHS 172
H CS+C K+F TGQALGGHKR HY+G
Sbjct: 95 ---ASHRSLYGGGENDKSTPSTAVKSHVCSVCGKSFATGQALGGHKRCHYDG-------- 143
Query: 173 SSAVTXXXXXXXXXXXXXXXXFEFDLNLPALPELWPGNREQEVESPLPGKKPRL 226
V+ FDLN+ + P + EV SP+ KKPRL
Sbjct: 144 --GVSNSEGVGSTSHVSSSSHRGFDLNIIPVQGFSP---DDEVMSPMATKKPRL 192
>AT3G49930.1 | Symbols: | zinc finger (C2H2 type) family protein |
chr3:18510246-18510893 FORWARD
Length = 215
Score = 108 bits (271), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/154 (43%), Positives = 80/154 (51%), Gaps = 16/154 (10%)
Query: 14 PFNYEDTWTKRKRSKRPRGESP---PTEEEYLALCLIMLARGGST--SPTAEEIASTSXX 68
P N E +WTKRKR+KR R + P P+EEEYLALCL+MLARG S SP ++ + +
Sbjct: 30 PENLE-SWTKRKRTKRHRIDQPNPPPSEEEYLALCLLMLARGSSDHHSPPSDHHSLSPLS 88
Query: 69 XXXXXALNLSYKCTVCNKAFPSYQALGGHKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 128
YKC+VC K+FPSYQALGGHK
Sbjct: 89 DHQK-----DYKCSVCGKSFPSYQALGGHK-----TSHRKPVSVDVNNSNGTVTNNGNIS 138
Query: 129 XXXXXXXXXXHECSICHKTFPTGQALGGHKRRHY 162
H CSIC K+FP+GQALGGHKR HY
Sbjct: 139 NGLVGQSGKTHNCSICFKSFPSGQALGGHKRCHY 172
>AT5G67450.1 | Symbols: AZF1 | AZF1 (ARABIDOPSIS ZINC-FINGER PROTEIN
1); DNA binding / nucleic acid binding / transcription
factor/ transcription repressor/ zinc ion binding |
chr5:26919142-26919879 REVERSE
Length = 245
Score = 105 bits (262), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/193 (36%), Positives = 84/193 (43%), Gaps = 35/193 (18%)
Query: 1 MALEALNSPTTAT-------------PFNYEDTWTKRKRSKRPR----------GESPPT 37
MALE LNSPT T P N E W KRKR+KR R ++ P+
Sbjct: 1 MALETLNSPTATTTARPLLRYREEMEPENLEQ-WAKRKRTKRQRFDHGHQNQETNKNLPS 59
Query: 38 EEEYLALCLIMLARGGSTSPTAEEIASTSXXXXXXXALNLSYKCTVCNKAFPSYQALGGH 97
EEEYLALCL+MLARG + + + + YKCTVC K+F SYQALGGH
Sbjct: 60 EEEYLALCLLMLARGSA----VQSPPLPPLPSRASPSDHRDYKCTVCGKSFSSYQALGGH 115
Query: 98 KXX-------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHECSICHKTFPT 150
K H CSIC K+F +
Sbjct: 116 KTSHRKPTNTSITSGNQELSNNSHSNSGSVVINVTVNTGNGVSQSGKIHTCSICFKSFAS 175
Query: 151 GQALGGHKRRHYE 163
GQALGGHKR HY+
Sbjct: 176 GQALGGHKRCHYD 188
>AT1G49900.1 | Symbols: | zinc finger (C2H2 type) family protein |
chr1:18474108-18477643 REVERSE
Length = 917
Score = 81.3 bits (199), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 44/91 (48%), Gaps = 8/91 (8%)
Query: 79 YKCTVCNKAFPSYQALGGHKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 138
+KC++C K F SYQALGGHK
Sbjct: 193 FKCSICEKVFTSYQALGGHKASHSIKAAQLENAGADAGEKTRSKMLSPSGKI-------- 244
Query: 139 HECSICHKTFPTGQALGGHKRRHYEGPVGGH 169
H+C ICH FPTGQALGGHKRRHYEG +GGH
Sbjct: 245 HKCDICHVLFPTGQALGGHKRRHYEGLLGGH 275
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 44/95 (46%), Gaps = 12/95 (12%)
Query: 78 SYKCTVCNKAFPSYQALGGHKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 137
SY+C VC + PSYQALGGHK
Sbjct: 749 SYQCNVCGRELPSYQALGGHKASHRTKPPVENATGEKMRPKKLAPSGKI----------- 797
Query: 138 XHECSICHKTFPTGQALGGHKRRHYEGPVGGHNHS 172
H+CSICH+ F TGQ+LGGHKR HYEG + GH S
Sbjct: 798 -HKCSICHREFSTGQSLGGHKRLHYEGVLRGHKRS 831
>AT2G28200.1 | Symbols: | nucleic acid binding / transcription
factor/ zinc ion binding | chr2:12024321-12025181
FORWARD
Length = 286
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 52/140 (37%), Gaps = 16/140 (11%)
Query: 38 EEEYLALCLIMLARGGST-SPTAEEIASTSXXXXXXXALNLSYKCTVCNKAFPSYQALGG 96
EEE +A+CLIMLARG SP + + Y+C CN+ F S+QALGG
Sbjct: 73 EEEDMAICLIMLARGTVLPSPDLKNSRKIHQKISSENSSFYVYECKTCNRTFSSFQALGG 132
Query: 97 HKXX---------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHEC 141
H+ HEC
Sbjct: 133 HRASHKKPRTSTEEKTRLPLTQPKSSASEEGQNSHFKVSGSALASQASNIINKANKVHEC 192
Query: 142 SICHKTFPTGQALGGHKRRH 161
SIC F +GQALGGH RRH
Sbjct: 193 SICGSEFTSGQALGGHMRRH 212
>AT5G56200.1 | Symbols: | zinc finger (C2H2 type) family protein |
chr5:22747768-22749249 FORWARD
Length = 493
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 39/97 (40%), Gaps = 9/97 (9%)
Query: 79 YKCTVCNKAFPSYQALGGHKXXXXXXXXXXXXXXXXXXXXXXX---------XXXXXXXX 129
+ C CNK+F SYQALGGH+
Sbjct: 342 HVCVTCNKSFSSYQALGGHRASHNKVKILENHQARANAEASLLGTEAIITGLASAQGTNT 401
Query: 130 XXXXXXXXXHECSICHKTFPTGQALGGHKRRHYEGPV 166
H C+ICHK+F TGQALGGHKR H+ PV
Sbjct: 402 SLSSSHNGDHVCNICHKSFSTGQALGGHKRCHWTAPV 438