Jatropha Genome Database
- JcCA0305301.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0305301.10 + phase: 0
(282 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G17570.1 | Symbols: | undecaprenyl pyrophosphate synthetase ... 352 2e-97
AT5G60510.1 | Symbols: | undecaprenyl pyrophosphate synthetase ... 263 8e-71
AT5G60500.1 | Symbols: | undecaprenyl pyrophosphate synthetase ... 255 2e-68
AT5G58770.1 | Symbols: | dehydrodolichyl diphosphate synthase, ... 122 3e-28
AT5G58784.1 | Symbols: | dehydrodolichyl diphosphate synthase |... 121 5e-28
AT2G23410.1 | Symbols: ACPT | ACPT (Arabidopsis cis-prenyltransf... 115 3e-26
AT5G58780.1 | Symbols: | dehydrodolichyl diphosphate synthase, ... 115 4e-26
AT5G58782.1 | Symbols: | dehydrodolichyl diphosphate synthase, ... 112 2e-25
AT2G23400.1 | Symbols: | dehydrodolichyl diphosphate synthase, ... 99 4e-21
>AT2G17570.1 | Symbols: | undecaprenyl pyrophosphate synthetase
family protein / UPP synthetase family protein |
chr2:7645086-7645973 FORWARD
Length = 295
Score = 352 bits (902), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 165/268 (61%), Positives = 213/268 (79%), Gaps = 2/268 (0%)
Query: 16 RNCLFSVLSVGPIPCHLAFIMDGNRRFAKKQKQGVVTGYRAGFTALMSIIKYCSELGVKY 75
R LF V+S+GPIPCH+AFIMDGNRR+AKK +G++AGF+ALMS+++YC ELG+KY
Sbjct: 27 RRSLFRVISMGPIPCHIAFIMDGNRRYAKKCGLLDGSGHKAGFSALMSMLQYCYELGIKY 86
Query: 76 VTIYAFSIDNFRREPEEVKIIMDLMLEKTEGILKEESVVHQYGVRVYFLGNLKLLCEPLR 135
VTIYAFSIDNFRR+PEEV+ +MDLMLEK + +L++ES+VHQYG+RVYF+GNL LL + +R
Sbjct: 87 VTIYAFSIDNFRRKPEEVESVMDLMLEKIKSLLEKESIVHQYGIRVYFIGNLALLNDQVR 146
Query: 136 VAAEKVMKATASNTKLLLFICVAYTSLDEIIHAVHESCNDKLKNIILPDKPH--TDXXXX 193
AAEKVMKATA N++++L IC+AY S DEI+ AV +SC +K NI + H +D
Sbjct: 147 AAAEKVMKATAKNSRVVLLICIAYNSTDEIVQAVKKSCINKSDNIEASNYKHEDSDSDIE 206
Query: 194 XXXXXXXKDGIKLVDIEKHMYMALGPEPDVLIRTSGESRLSNFLLWQTSHCTLYSPDALW 253
+ I+LVDIE++M M++ P PD+LIR+SGE+RLSNFLLWQT + L SP ALW
Sbjct: 207 GTDMENQEKKIQLVDIEENMQMSVAPNPDILIRSSGETRLSNFLLWQTGNTQLCSPAALW 266
Query: 254 PEIGLWNLVWAVLNFQRNHSYLEKKKKQ 281
PEIGL +L+WA+LNFQRNHSYLEK+KKQ
Sbjct: 267 PEIGLRHLLWAILNFQRNHSYLEKRKKQ 294
>AT5G60510.1 | Symbols: | undecaprenyl pyrophosphate synthetase
family protein / UPP synthetase family protein |
chr5:24330721-24331539 FORWARD
Length = 272
Score = 263 bits (673), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 130/271 (47%), Positives = 178/271 (65%), Gaps = 19/271 (7%)
Query: 11 LASSLRNCLFSVLSVGPIPCHLAFIMDGNRRFAKKQK-QGVVTGYRAGFTALMSIIKYCS 69
L S +R +F VL VGPIP +++FIMDGNRRFAKK+ +G+ G+RAGF ++ I++YC
Sbjct: 18 LMSLMRKFIFKVLRVGPIPTNISFIMDGNRRFAKKRNLEGLDAGHRAGFISVKYILQYCK 77
Query: 70 ELGVKYVTIYAFSIDNFRREPEEVKIIMDLMLEKTEGILKEESVVHQYGVRVYFLGNLKL 129
E+GV YVT+YAF +DNF+R PEEVK +MDLMLEK E + + + GVR+ F G+L
Sbjct: 78 EIGVPYVTLYAFGMDNFKRGPEEVKCVMDLMLEKVELTIDQAVSGNMNGVRIIFAGDLNS 137
Query: 130 LCEPLRVAAEKVMKATASNTKLLLFICVAYTSLDEIIHAVHESCNDKLKNIILPDKPHTD 189
L E R A +K+M+ T N L++ +CVAY++ EI+HAV +SC K K
Sbjct: 138 LNERFRAATKKLMELTEENRDLIVVVCVAYSTSVEIVHAVRDSCVRKSKT---------- 187
Query: 190 XXXXXXXXXXXKDGIKLVDIEKHMYMALGPEPDVLIRTSGESRLSNFLLWQTSHCTLYSP 249
++L DIE+ MY ++ P PD+++RT G RLSNF+ WQTS L+
Sbjct: 188 --------GDGSSALELSDIEECMYTSVVPVPDLVVRTGGGDRLSNFMTWQTSRALLHRT 239
Query: 250 DALWPEIGLWNLVWAVLNFQRNHSYLEKKKK 280
+ALWPE+GLW+LVWA+L FQR YL+KKKK
Sbjct: 240 EALWPELGLWHLVWAILKFQRMQDYLQKKKK 270
>AT5G60500.1 | Symbols: | undecaprenyl pyrophosphate synthetase
family protein / UPP synthetase family protein |
chr5:24328815-24329630 FORWARD
Length = 271
Score = 255 bits (652), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 131/274 (47%), Positives = 178/274 (64%), Gaps = 25/274 (9%)
Query: 11 LASSLRNCLFSVLSVGPIPCHLAFIMDGNRRFAKKQKQ-GVVTGYRAGFTALMSIIKYCS 69
L S +R LF VL VGPIP +++FIMDGNRRFAKK G+ G+RAGF ++ I++YC
Sbjct: 17 LMSLMRKFLFRVLCVGPIPTNISFIMDGNRRFAKKHNLIGLDAGHRAGFISVKYILQYCK 76
Query: 70 ELGVKYVTIYAFSIDNFRREPEEVKIIMDLMLEKTEGILKEESVVHQYGVRVYFLGNLKL 129
E+GV YVT++AF +DNF+R PEEVK +MDLMLEK E + + + GVR+ F G+L
Sbjct: 77 EIGVPYVTLHAFGMDNFKRGPEEVKCVMDLMLEKVELAIDQAVSGNMNGVRIIFAGDLDS 136
Query: 130 LCEPLRVAAEKVMKATASNTKLLLFICVAYTSLDEIIHAVHESCNDKLKN---IILPDKP 186
L E R A +K+M+ T N L++ +CVAY++ EI+HAV +SC K N ++L
Sbjct: 137 LNEHFRAATKKLMELTEENRDLIVVVCVAYSTSLEIVHAVRKSCVRKCTNGDDLVL---- 192
Query: 187 HTDXXXXXXXXXXXKDGIKLVDIEKHMYMALGPEPDVLIRTSGESRLSNFLLWQTSHCTL 246
++L D+E+ MY ++ P PD++IRT G RLSNF+ WQTS L
Sbjct: 193 -----------------LELSDVEECMYTSIVPVPDLVIRTGGGDRLSNFMTWQTSRSLL 235
Query: 247 YSPDALWPEIGLWNLVWAVLNFQRNHSYLEKKKK 280
+ +ALWPE+GLW+LVWA+L FQR YL KKKK
Sbjct: 236 HRTEALWPELGLWHLVWAILKFQRMQDYLTKKKK 269
>AT5G58770.1 | Symbols: | dehydrodolichyl diphosphate synthase,
putative / DEDOL-PP synthase, putative |
chr5:23734396-23735495 FORWARD
Length = 310
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 129/261 (49%), Gaps = 37/261 (14%)
Query: 28 IPCHLAFIMDGNRRFAKKQKQGVVTGYRAGFTALMSIIKYCSELGVKYVTIYAFSIDNFR 87
+P H+A IMDGN R+AK + G+RAG AL I++ C + G++ +T++AFS DN+
Sbjct: 77 MPKHVAIIMDGNGRWAKNRGLQPWDGHRAGVEALKEIVELCGKWGIQVLTVFAFSTDNWI 136
Query: 88 REPEEVKIIMDLMLEKTEGILKEE-SVVHQYGVRVYFLGNLKLLCEPLRVAAEKVMKATA 146
R +I +D + E LK E + + VR+ +G+ L + L +V + T
Sbjct: 137 RP----RIEIDFLFSLFERSLKTEFQNLAKNNVRISIIGDSSKLPKSLLRVINEVEEVTK 192
Query: 147 SNTKLLLFICVAYTSLDEIIHAVHESCNDKLKNIILPDKPHTDXXXXXXXXXXXKDG--- 203
+NT+L L + V Y+ +++ A C + + KDG
Sbjct: 193 NNTRLQLIVAVGYSGKYDVLQA----CRGIARRV--------------------KDGEIE 228
Query: 204 -----IKLVDIEKHMYMALGPEPDVLIRTSGESRLSNFLLWQTSHCTLYSPDALWPEIGL 258
+L++ E P PD+LIRTSGE R+SNFLLWQ ++ L+ LWP+ G
Sbjct: 229 VEEIDERLIEEELETNCTEFPYPDLLIRTSGELRVSNFLLWQLAYTELFFAQELWPDFGR 288
Query: 259 WNLVWAVLNFQRNHSYLEKKK 279
+ A+++FQ+ +K
Sbjct: 289 SGFIEALMSFQQRQRRFGGRK 309
>AT5G58784.1 | Symbols: | dehydrodolichyl diphosphate synthase |
chr5:23739950-23741267 REVERSE
Length = 302
Score = 121 bits (304), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 82/238 (34%), Positives = 119/238 (50%), Gaps = 35/238 (14%)
Query: 28 IPCHLAFIMDGNRRFAKKQKQGVVTGYRAGFTALMSIIKYCSELGVKYVTIYAFSIDNFR 87
+P H+A I+DGNRR+A+K+ G G+ AG LM K C +G ++++AFS +N+
Sbjct: 70 MPKHVAVILDGNRRWAEKRGLGTSEGHEAGARRLMENAKDCFAMGTNTISLFAFSTENWE 129
Query: 88 REPEEVKIIMDLMLEKTEGILKEESVVHQYGVRVYFLGNLKLLCEPLRVAAEKVMKATAS 147
R +EVK +M L EK + + + +++ +GN L E L E+V +AT S
Sbjct: 130 RPEDEVKCLMAL-FEKY--LASDMPYLRSDKIKISVIGNRTKLPESLLGLIEEVEEATKS 186
Query: 148 NTKLLLFICVAYTSLDEIIHAVHESCNDKLKNIILPDKPHTDXXXXXXXXXXXKDG-IKL 206
L I + Y+ +I+ A N KDG I++
Sbjct: 187 YEGKNLIIAIDYSGRYDILQACKSLAN------------------------KVKDGLIQV 222
Query: 207 VDI-EKHMYMAL------GPEPDVLIRTSGESRLSNFLLWQTSHCTLYSPDALWPEIG 257
DI EK M L P PD+LIRTSGE R+SNF LWQ+++ LY P LWP+ G
Sbjct: 223 EDINEKAMEKELLTKCSEFPNPDLLIRTSGEQRISNFFLWQSAYTELYFPTVLWPDFG 280
>AT2G23410.1 | Symbols: ACPT | ACPT (Arabidopsis
cis-prenyltransferase); dehydrodolichyl diphosphate
synthase | chr2:9966247-9967741 REVERSE
Length = 303
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 121/246 (49%), Gaps = 24/246 (9%)
Query: 28 IPCHLAFIMDGNRRFAKKQKQGVVTGYRAGFTALMSIIKYCSELGVKYVTIYAFSIDNFR 87
+P H+AFI+DGNRR+AK+ G+ AG L+ I + C ELGV V+ +AFS +N+
Sbjct: 70 MPRHVAFILDGNRRWAKRAGLTTSQGHEAGAKRLIDIAELCFELGVHTVSAFAFSTENWG 129
Query: 88 REPEEVKIIMDLMLE-KTEGILKEESVVHQYGVRVYFLGNLKLLCEPLRVAAEKVMKATA 146
R+ E+ +M L+ + + +K H+ VRV +GN + E L ++ +AT
Sbjct: 130 RDKIEIDNLMSLIQHYRNKSNIK---FFHRSEVRVSVIGNKTKIPESLLKEIHEIEEATK 186
Query: 147 SNTKLLLFICVAYTSLDEIIHAVHESCNDKLKNIILPDKPHTDXXXXXXXXXXXKDGIKL 206
L + V Y+ +I+HA K +I ++ +
Sbjct: 187 GYKNKHLIMAVDYSGKFDIMHACKSLVKKSEKGLI------------------REEDVDE 228
Query: 207 VDIEKHMYMALG--PEPDVLIRTSGESRLSNFLLWQTSHCTLYSPDALWPEIGLWNLVWA 264
IE+ + P PD++IRTSGE R+SNF LWQ ++ L+ WP+ L+ A
Sbjct: 229 ALIERELLTNCSDFPSPDLMIRTSGEQRISNFFLWQLAYSELFFSPVFWPDFDKDKLLEA 288
Query: 265 VLNFQR 270
+ ++QR
Sbjct: 289 LASYQR 294
>AT5G58780.1 | Symbols: | dehydrodolichyl diphosphate synthase,
putative / DEDOL-PP synthase, putative |
chr5:23735755-23737284 REVERSE
Length = 302
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 77/251 (30%), Positives = 123/251 (49%), Gaps = 31/251 (12%)
Query: 28 IPCHLAFIMDGNRRFAKKQKQGVVTGYRAGFTALMSIIKYCSELGVKYVTIYAFSIDNFR 87
+P H+A IMDGNRR+AK+ G+ AG L+ + C +LG+ V+ +AFS +N+
Sbjct: 70 MPRHVAVIMDGNRRWAKRAGLLTSQGHEAGAKRLIEFSELCFKLGIHTVSAFAFSTENWG 129
Query: 88 REPEEVKIIMDL----MLEKTEGILKEESVVHQYGVRVYFLGNLKLLCEPLRVAAEKVMK 143
R EVK +M L + K + +EE+ RV +GNL + E L +++ +
Sbjct: 130 RHKIEVKCLMSLIQHYLKSKIQYFQREET-------RVSVIGNLTKIPESLLRTVQEIEE 182
Query: 144 ATASNTKLLLFICVAYTSLDEIIHAVHESCNDKLKNIILPDKPHTDXXXXXXXXXXXKDG 203
AT S K L + + Y+ +I+ A K +I ++
Sbjct: 183 ATRSYKKKHLILAIDYSGRLDILRACKSIVKKSEKGLI------------------REED 224
Query: 204 IKLVDIEKHMYMALG--PEPDVLIRTSGESRLSNFLLWQTSHCTLYSPDALWPEIGLWNL 261
+ IE+ + P PD+LIRTSGE R+SNF LWQ ++ L+ LWP+ L
Sbjct: 225 VDEALIERELLTNCTEFPSPDLLIRTSGEQRISNFFLWQLAYTELFFSPVLWPDFDKDKL 284
Query: 262 VWAVLNFQRNH 272
+ A++++QR
Sbjct: 285 LEALVSYQRRE 295
>AT5G58782.1 | Symbols: | dehydrodolichyl diphosphate synthase,
putative / DEDOL-PP synthase, putative |
chr5:23738306-23739430 REVERSE
Length = 289
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 113/244 (46%), Gaps = 19/244 (7%)
Query: 28 IPCHLAFIMDGNRRFAKKQKQGVVTGYRAGFTALMSIIKYCSELGVKYVTIYAFSIDNFR 87
+P H+A IMDGNRR+AK+ GY AG L+ C +LG+ V+ +AFS +N+
Sbjct: 57 MPRHVAVIMDGNRRWAKQTGLLTSQGYEAGAKRLLEFADLCFKLGINTVSAFAFSTENWG 116
Query: 88 REPEEVKIIMDLMLEKTEGILKEESVVHQYGVRVYFLGNLKLLCEPLRVAAEKVMKATAS 147
R EVK +M L + ++ +RV +GNL + E L ++ +AT S
Sbjct: 117 RHKIEVKCLMYLFQRYLKSKIQ---FFQSKEIRVSVIGNLAKIPESLLRTVHELEEATKS 173
Query: 148 NTKLLLFICVAYTSLDEIIHAVHESCNDKLKNIILPDKPHTDXXXXXXXXXXXKDGIKLV 207
K L + + Y+ +I+ A + +I + L
Sbjct: 174 YKKKHLILAIDYSGRFDILGACKNIVKKSEQGLIREEDVDET----------------LF 217
Query: 208 DIEKHMYMALGPEPDVLIRTSGESRLSNFLLWQTSHCTLYSPDALWPEIGLWNLVWAVLN 267
+ E P PD+LIRTSGE R+SNF LWQ ++ + LWP+ + A+++
Sbjct: 218 ERELQTRCTEFPSPDLLIRTSGEQRISNFFLWQLAYTEFFFSPVLWPDFDKQKFIEALVS 277
Query: 268 FQRN 271
+QR
Sbjct: 278 YQRR 281
>AT2G23400.1 | Symbols: | dehydrodolichyl diphosphate synthase,
putative / DEDOL-PP synthase, putative |
chr2:9963978-9965229 REVERSE
Length = 253
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 117/244 (47%), Gaps = 38/244 (15%)
Query: 28 IPCHLAFIMDGNRRFAKKQKQGVVTGYRAGFTALMSIIKYCSELGVKYVTIYAFSIDNFR 87
+P H++FI+DGNRR+AK+ G+ AG ++ I + C ELG+ V+ +AFS +N+
Sbjct: 36 MPRHVSFILDGNRRWAKRDGLTTAQGHEAGTKRIIEIAEVCFELGIHTVSAFAFSTENWG 95
Query: 88 REPEEVKIIMDLMLEKTEGILKEESVVHQYGVRVYFLGNLKLLCEPLRVAAEKVMKATAS 147
R+ EVK +M L + ++ + VRV +GN + E L ++ +AT +
Sbjct: 96 RDKFEVKCLMSLFNHYLKSNIQ---YFQRKEVRVSVIGNKTKIPESLLKEIHEIEEATKA 152
Query: 148 NTKLLLFICVAYTSLDEIIHAVHESCNDKLKNIILPDKPHTDXXXXXXXXXXXKDGIKLV 207
++ +S H V +S ++ ++ +
Sbjct: 153 TR-------ISISSW----HLVKKSEKGLIR----------------------EEDVDEA 179
Query: 208 DIEKHMYMALG--PEPDVLIRTSGESRLSNFLLWQTSHCTLYSPDALWPEIGLWNLVWAV 265
IE+ + P PD++IRTSGE R+SNF LWQ ++ L+ LWP+ L+ A+
Sbjct: 180 LIERELLTNCSDFPSPDLMIRTSGEQRISNFFLWQLAYTELFYSPVLWPDFDKDKLLEAL 239
Query: 266 LNFQ 269
++Q
Sbjct: 240 ASYQ 243