Jatropha Genome Database

JcCA0304431.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0304431.10 - phase: 2 /TE
         (440 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G23160.1 | Symbols:  | protein kinase family protein | chr4:1...   125   6e-29
ATMG00810.1 | Symbols: ORF240B | hypothetical protein | chrM:227...   106   4e-23

>AT4G23160.1 | Symbols:  | protein kinase family protein |
           chr4:12129485-12134086 FORWARD
          Length = 1262

 Score =  125 bits (314), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 73/204 (35%), Positives = 116/204 (56%), Gaps = 5/204 (2%)

Query: 72  RRPLYGLKQAPRAWYVRIDSYLIQXGFRRSDNEATLYVENLKDGEKLILSL--YVNDMLV 129
           ++ +YGLKQA R W+++    LI  GF +S ++ T +   LK    L L +  YV+D+++
Sbjct: 233 KKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYF---LKITATLFLCVLVYVDDIII 289

Query: 130 IGSVFQLLNNFKKEMQQEFEMSYLGLMNYFLGMEFDQMEQGIFLTQRKYAWDVLKKFQLE 189
             +    ++  K +++  F++  LG + YFLG+E  +   GI + QRKYA D+L +  L 
Sbjct: 290 CSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAAGINICQRKYALDLLDETGLL 349

Query: 190 QDKSVSTPLVHNEKLTSNDGEDKVDSNVYRSLIGSLLYLTSTRPDLMFSASLLSRFMHLP 249
             K  S P+  +   +++ G D VD+  YR LIG L+YL  TR D+ F+ + LS+F   P
Sbjct: 350 GCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAP 409

Query: 250 SQAHLNAARIVLRYIKGTIDFGIL 273
             AH  A   +L YIKGT+  G+ 
Sbjct: 410 RLAHQQAVMKILHYIKGTVGQGLF 433


>ATMG00810.1 | Symbols: ORF240B | hypothetical protein |
           chrM:227709-228431 REVERSE
          Length = 240

 Score =  106 bits (264), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 62/165 (37%), Positives = 97/165 (58%), Gaps = 3/165 (1%)

Query: 120 LSLYVNDMLVIGSVFQLLNNFKKEMQQEFEMSYLGLMNYFLGMEFDQMEQGIFLTQRKYA 179
           L LYV+D+L+ GS   LLN    ++   F M  LG ++YFLG++      G+FL+Q KYA
Sbjct: 3   LLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYA 62

Query: 180 WDVLKKFQLEQDKSVSTPLVHNEKLTSNDGEDK-VDSNVYRSLIGSLLYLTSTRPDLMFS 238
             +L    +   K +STPL    KL S+    K  D + +RS++G+L YLT TRPD+ ++
Sbjct: 63  EQILNNAGMLDCKPMSTPLP--LKLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYA 120

Query: 239 ASLLSRFMHLPSQAHLNAARIVLRYIKGTIDFGILLERKKMENYK 283
            +++ + MH P+ A  +  + VLRY+KGTI  G+ + +    N +
Sbjct: 121 VNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQ 165