Jatropha Genome Database

JcCA0304341.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0304341.10 - phase: 2 /partial
         (269 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G17720.2 | Symbols: ATB BETA | ATB BETA; nucleotide binding /...   517   e-147
AT1G17720.1 | Symbols: ATB BETA | ATB BETA; nucleotide binding /...   516   e-147
AT1G51690.1 | Symbols: ATB ALPHA | ATB ALPHA; nucleotide binding...   499   e-142
AT1G51690.2 | Symbols: ATB ALPHA | ATB ALPHA; nucleotide binding...   499   e-142

>AT1G17720.2 | Symbols: ATB BETA | ATB BETA; nucleotide binding /
           protein phosphatase type 2A regulator |
           chr1:6093949-6098065 REVERSE
          Length = 500

 Score =  517 bits (1331), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 240/269 (89%), Positives = 259/269 (96%)

Query: 1   DGETFISADDLRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPNHCNMLAYSSS 60
           DGETFISADDLR+NLWNLEISNQSFNIVDVKP NMEDLTEVITSAEFHP HCNMLAYSSS
Sbjct: 232 DGETFISADDLRVNLWNLEISNQSFNIVDVKPTNMEDLTEVITSAEFHPIHCNMLAYSSS 291

Query: 61  RGSIRLIDLRQSALCDSHAKLFEEQEAPGSRSFFTEIIASISDIKFAKDGRHILSRDYMT 120
           +GSIRLID+RQSALCDSH KLFEE EAPGSRSFFTEIIASISDIKF+KDGR+ILSRDYMT
Sbjct: 292 KGSIRLIDMRQSALCDSHTKLFEEPEAPGSRSFFTEIIASISDIKFSKDGRYILSRDYMT 351

Query: 121 LKLWDINMDSGPVATFQVHEYLRPKLCDLYENDSIFDKFECCLSGDGLRVATGSYSNLFR 180
           LKLWDINMDSGPVA++QVHE+LRP+LCDLYENDSIFDKFECCLSGDGLRVATGSYSNLFR
Sbjct: 352 LKLWDINMDSGPVASYQVHEHLRPRLCDLYENDSIFDKFECCLSGDGLRVATGSYSNLFR 411

Query: 181 VFGCAPGSTEETTLEASKNPMRRQVQTPSRPSRSLSSITRVVRRGAESPGVDANGNSFDF 240
           VFG + GSTE  TLEASKNPMRRQ+QTP+RPSRS+ S+TRVVRRG+ESPG +ANGN++DF
Sbjct: 412 VFGASQGSTEAATLEASKNPMRRQIQTPARPSRSIGSMTRVVRRGSESPGTEANGNAYDF 471

Query: 241 TTKLLHLAWHPTENSIACAAANSLYMYYA 269
           TTKLLH+AWHPTENSIACAAANSLYMYYA
Sbjct: 472 TTKLLHMAWHPTENSIACAAANSLYMYYA 500


>AT1G17720.1 | Symbols: ATB BETA | ATB BETA; nucleotide binding /
           protein phosphatase type 2A regulator |
           chr1:6093949-6098065 REVERSE
          Length = 501

 Score =  516 bits (1330), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 240/269 (89%), Positives = 259/269 (96%)

Query: 1   DGETFISADDLRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPNHCNMLAYSSS 60
           DGETFISADDLR+NLWNLEISNQSFNIVDVKP NMEDLTEVITSAEFHP HCNMLAYSSS
Sbjct: 233 DGETFISADDLRVNLWNLEISNQSFNIVDVKPTNMEDLTEVITSAEFHPIHCNMLAYSSS 292

Query: 61  RGSIRLIDLRQSALCDSHAKLFEEQEAPGSRSFFTEIIASISDIKFAKDGRHILSRDYMT 120
           +GSIRLID+RQSALCDSH KLFEE EAPGSRSFFTEIIASISDIKF+KDGR+ILSRDYMT
Sbjct: 293 KGSIRLIDMRQSALCDSHTKLFEEPEAPGSRSFFTEIIASISDIKFSKDGRYILSRDYMT 352

Query: 121 LKLWDINMDSGPVATFQVHEYLRPKLCDLYENDSIFDKFECCLSGDGLRVATGSYSNLFR 180
           LKLWDINMDSGPVA++QVHE+LRP+LCDLYENDSIFDKFECCLSGDGLRVATGSYSNLFR
Sbjct: 353 LKLWDINMDSGPVASYQVHEHLRPRLCDLYENDSIFDKFECCLSGDGLRVATGSYSNLFR 412

Query: 181 VFGCAPGSTEETTLEASKNPMRRQVQTPSRPSRSLSSITRVVRRGAESPGVDANGNSFDF 240
           VFG + GSTE  TLEASKNPMRRQ+QTP+RPSRS+ S+TRVVRRG+ESPG +ANGN++DF
Sbjct: 413 VFGASQGSTEAATLEASKNPMRRQIQTPARPSRSIGSMTRVVRRGSESPGTEANGNAYDF 472

Query: 241 TTKLLHLAWHPTENSIACAAANSLYMYYA 269
           TTKLLH+AWHPTENSIACAAANSLYMYYA
Sbjct: 473 TTKLLHMAWHPTENSIACAAANSLYMYYA 501


>AT1G51690.1 | Symbols: ATB ALPHA | ATB ALPHA; nucleotide binding /
           protein phosphatase type 2A regulator |
           chr1:19166218-19169974 FORWARD
          Length = 513

 Score =  499 bits (1286), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 234/269 (86%), Positives = 251/269 (93%)

Query: 1   DGETFISADDLRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPNHCNMLAYSSS 60
           DGETFISADDLRINLWNLEISNQSFNIVDVKPA MEDL+EVITSAEFHP HCNMLAYSSS
Sbjct: 245 DGETFISADDLRINLWNLEISNQSFNIVDVKPAKMEDLSEVITSAEFHPTHCNMLAYSSS 304

Query: 61  RGSIRLIDLRQSALCDSHAKLFEEQEAPGSRSFFTEIIASISDIKFAKDGRHILSRDYMT 120
           +GSIRLIDLRQSALCDSH+KLFEE E  G +SFFTEIIAS+SDIKFAK+GR++LSRDYMT
Sbjct: 305 KGSIRLIDLRQSALCDSHSKLFEEPEQAGPKSFFTEIIASVSDIKFAKEGRYLLSRDYMT 364

Query: 121 LKLWDINMDSGPVATFQVHEYLRPKLCDLYENDSIFDKFECCLSGDGLRVATGSYSNLFR 180
           LKLWDINMD+GPVATFQVHEYL+PKLCDLYENDSIFDKFECC+SG+GLR ATGSYSNLFR
Sbjct: 365 LKLWDINMDAGPVATFQVHEYLKPKLCDLYENDSIFDKFECCISGNGLRAATGSYSNLFR 424

Query: 181 VFGCAPGSTEETTLEASKNPMRRQVQTPSRPSRSLSSITRVVRRGAESPGVDANGNSFDF 240
           VFG APGSTE  TLEAS+NPMRR V  PSRPSR+LSSITRVV RG+ESPGVD N N+ D+
Sbjct: 425 VFGVAPGSTETATLEASRNPMRRHVPIPSRPSRALSSITRVVSRGSESPGVDGNTNALDY 484

Query: 241 TTKLLHLAWHPTENSIACAAANSLYMYYA 269
           TTKLLHLAWHP ENSIACAAANSLYMYYA
Sbjct: 485 TTKLLHLAWHPNENSIACAAANSLYMYYA 513


>AT1G51690.2 | Symbols: ATB ALPHA | ATB ALPHA; nucleotide binding /
           protein phosphatase type 2A regulator |
           chr1:19166218-19169974 FORWARD
          Length = 512

 Score =  499 bits (1286), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 234/269 (86%), Positives = 251/269 (93%)

Query: 1   DGETFISADDLRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPNHCNMLAYSSS 60
           DGETFISADDLRINLWNLEISNQSFNIVDVKPA MEDL+EVITSAEFHP HCNMLAYSSS
Sbjct: 244 DGETFISADDLRINLWNLEISNQSFNIVDVKPAKMEDLSEVITSAEFHPTHCNMLAYSSS 303

Query: 61  RGSIRLIDLRQSALCDSHAKLFEEQEAPGSRSFFTEIIASISDIKFAKDGRHILSRDYMT 120
           +GSIRLIDLRQSALCDSH+KLFEE E  G +SFFTEIIAS+SDIKFAK+GR++LSRDYMT
Sbjct: 304 KGSIRLIDLRQSALCDSHSKLFEEPEQAGPKSFFTEIIASVSDIKFAKEGRYLLSRDYMT 363

Query: 121 LKLWDINMDSGPVATFQVHEYLRPKLCDLYENDSIFDKFECCLSGDGLRVATGSYSNLFR 180
           LKLWDINMD+GPVATFQVHEYL+PKLCDLYENDSIFDKFECC+SG+GLR ATGSYSNLFR
Sbjct: 364 LKLWDINMDAGPVATFQVHEYLKPKLCDLYENDSIFDKFECCISGNGLRAATGSYSNLFR 423

Query: 181 VFGCAPGSTEETTLEASKNPMRRQVQTPSRPSRSLSSITRVVRRGAESPGVDANGNSFDF 240
           VFG APGSTE  TLEAS+NPMRR V  PSRPSR+LSSITRVV RG+ESPGVD N N+ D+
Sbjct: 424 VFGVAPGSTETATLEASRNPMRRHVPIPSRPSRALSSITRVVSRGSESPGVDGNTNALDY 483

Query: 241 TTKLLHLAWHPTENSIACAAANSLYMYYA 269
           TTKLLHLAWHP ENSIACAAANSLYMYYA
Sbjct: 484 TTKLLHLAWHPNENSIACAAANSLYMYYA 512