Jatropha Genome Database

JcCA0304251.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0304251.20 + phase: 0 
         (163 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G57050.3 | Symbols: CBL | CBL (cystathionine beta-lyase); cys...   185   1e-47
AT3G57050.1 | Symbols: CBL | CBL (cystathionine beta-lyase); cys...   185   1e-47
AT3G57050.2 | Symbols: CBL | CBL (cystathionine beta-lyase); cys...   184   1e-47
AT1G33320.1 | Symbols:  | cystathionine gamma-synthase, chloropl...    76   9e-15
AT3G01120.1 | Symbols: MTO1, CGS, ATCYS1, CGS1 | MTO1 (METHIONIN...    76   1e-14
AT1G64660.1 | Symbols: ATMGL | ATMGL (ARABIDOPSIS THALIANA METHI...    53   7e-08

>AT3G57050.3 | Symbols: CBL | CBL (cystathionine beta-lyase);
           cystathionine beta-lyase | chr3:21112392-21114521
           REVERSE
          Length = 378

 Score =  185 bits (469), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 87/109 (79%), Positives = 100/109 (91%), Gaps = 2/109 (1%)

Query: 15  RLEGRDVQKNAIAKMAHTHSALVLVDNSIMSPVLSQPLELGADIVMHSATKFIAGHSDVM 74
           R +  D++K  I++MAH   ALVLVDNSIMSPVLS+PLELGADIVMHSATKFIAGHSDVM
Sbjct: 230 RQQISDIRK--ISEMAHAQGALVLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVM 287

Query: 75  AGVLAVKGQSLARDLYFLQNAEGSGLAPFDCWICLRGIKTMALRVEKQQ 123
           AGVLAVKG+ LA+++YFLQN+EGSGLAPFDCW+CLRGIKTMALR+EKQQ
Sbjct: 288 AGVLAVKGEKLAKEVYFLQNSEGSGLAPFDCWLCLRGIKTMALRIEKQQ 336


>AT3G57050.1 | Symbols: CBL | CBL (cystathionine beta-lyase);
           cystathionine beta-lyase | chr3:21111939-21114521
           REVERSE
          Length = 464

 Score =  185 bits (469), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 87/109 (79%), Positives = 100/109 (91%), Gaps = 2/109 (1%)

Query: 15  RLEGRDVQKNAIAKMAHTHSALVLVDNSIMSPVLSQPLELGADIVMHSATKFIAGHSDVM 74
           R +  D++K  I++MAH   ALVLVDNSIMSPVLS+PLELGADIVMHSATKFIAGHSDVM
Sbjct: 230 RQQISDIRK--ISEMAHAQGALVLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVM 287

Query: 75  AGVLAVKGQSLARDLYFLQNAEGSGLAPFDCWICLRGIKTMALRVEKQQ 123
           AGVLAVKG+ LA+++YFLQN+EGSGLAPFDCW+CLRGIKTMALR+EKQQ
Sbjct: 288 AGVLAVKGEKLAKEVYFLQNSEGSGLAPFDCWLCLRGIKTMALRIEKQQ 336


>AT3G57050.2 | Symbols: CBL | CBL (cystathionine beta-lyase);
           cystathionine beta-lyase | chr3:21111939-21114521
           REVERSE
          Length = 449

 Score =  184 bits (468), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 87/109 (79%), Positives = 100/109 (91%), Gaps = 2/109 (1%)

Query: 15  RLEGRDVQKNAIAKMAHTHSALVLVDNSIMSPVLSQPLELGADIVMHSATKFIAGHSDVM 74
           R +  D++K  I++MAH   ALVLVDNSIMSPVLS+PLELGADIVMHSATKFIAGHSDVM
Sbjct: 215 RQQISDIRK--ISEMAHAQGALVLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVM 272

Query: 75  AGVLAVKGQSLARDLYFLQNAEGSGLAPFDCWICLRGIKTMALRVEKQQ 123
           AGVLAVKG+ LA+++YFLQN+EGSGLAPFDCW+CLRGIKTMALR+EKQQ
Sbjct: 273 AGVLAVKGEKLAKEVYFLQNSEGSGLAPFDCWLCLRGIKTMALRIEKQQ 321


>AT1G33320.1 | Symbols:  | cystathionine gamma-synthase,
           chloroplast, putative / O-succinylhomoserine
           (Thiol)-lyase, putative | chr1:12081009-12083462 FORWARD
          Length = 412

 Score = 76.3 bits (186), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 38/98 (38%), Positives = 58/98 (59%), Gaps = 1/98 (1%)

Query: 26  IAKMAHTHSALVLVDNSIMSPVLSQPLELGADIVMHSATKFIAGHSDVMAGVLAVKGQSL 85
           ++K+ H    LV +D +I +P+  + L LGAD+V HSATK+I GH+D +AG ++     L
Sbjct: 190 VSKICHRRGTLVCIDATIATPINQKTLALGADLVHHSATKYIGGHNDFLAGSIS-GSMEL 248

Query: 86  ARDLYFLQNAEGSGLAPFDCWICLRGIKTMALRVEKQQ 123
              +  L    G  L P   ++ +RG+KTM LRV +Q 
Sbjct: 249 VSKIRNLHKLLGGTLNPNAAYLLIRGMKTMHLRVRQQN 286


>AT3G01120.1 | Symbols: MTO1, CGS, ATCYS1, CGS1 | MTO1 (METHIONINE
           OVERACCUMULATION 1); cystathionine gamma-synthase |
           chr3:39234-41865 REVERSE
          Length = 563

 Score = 75.9 bits (185), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 37/98 (37%), Positives = 61/98 (62%), Gaps = 1/98 (1%)

Query: 26  IAKMAHTHSALVLVDNSIMSPVLSQPLELGADIVMHSATKFIAGHSDVMAGVLAVKGQSL 85
           ++K+ H    LV +D +  +P+  + L LGAD+V+HSATK+I GH+DV+AG +      L
Sbjct: 340 VSKICHKRGTLVCIDGTFATPLNQKALALGADLVVHSATKYIGGHNDVLAGCIC-GSLKL 398

Query: 86  ARDLYFLQNAEGSGLAPFDCWICLRGIKTMALRVEKQQ 123
             ++  L +  G  L P   ++ +RG+KT+ LRV++Q 
Sbjct: 399 VSEIRNLHHVLGGTLNPNAAYLIIRGMKTLHLRVQQQN 436


>AT1G64660.1 | Symbols: ATMGL | ATMGL (ARABIDOPSIS THALIANA
           METHIONINE GAMMA-LYASE); catalytic/ methionine
           gamma-lyase | chr1:24028977-24030537 FORWARD
          Length = 441

 Score = 53.1 bits (126), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 23/53 (43%), Positives = 40/53 (75%), Gaps = 1/53 (1%)

Query: 26  IAKMAHTHSALVLVDNSIMSPVLSQPLELGADIVMHSATKFIAGHSDVMAGVL 78
           +++MAH     V+VDN+  +P++  P +LGAD+V+HS +KFI+G +D++AG +
Sbjct: 210 LSRMAHEKGVTVVVDNTF-APMVLSPAKLGADVVVHSISKFISGGADIIAGAV 261