Jatropha Genome Database

JcCA0302101.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0302101.10 - phase: 0 /pseudo/partial
         (102 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G39390.1 | Symbols:  | leucine-rich repeat family protein / p...    72   6e-14
AT5G20480.1 | Symbols: EFR | EFR (EF-TU RECEPTOR); ATP binding /...    72   6e-14
AT3G47570.1 | Symbols:  | leucine-rich repeat transmembrane prot...    66   4e-12
AT3G47110.1 | Symbols:  | leucine-rich repeat transmembrane prot...    65   6e-12
AT3G47580.1 | Symbols:  | leucine-rich repeat transmembrane prot...    64   2e-11
AT3G47090.1 | Symbols:  | leucine-rich repeat transmembrane prot...    50   2e-07
AT1G33590.1 | Symbols:  | disease resistance protein-related / L...    50   3e-07
AT5G65700.1 | Symbols: BAM1 | BAM1 (BARELY ANY MERISTEM 1); ATP ...    50   4e-07
AT1G33670.1 | Symbols:  | leucine-rich repeat family protein | c...    50   4e-07
AT1G33600.1 | Symbols:  | leucine-rich repeat family protein | c...    49   8e-07
AT3G08680.2 | Symbols:  | leucine-rich repeat transmembrane prot...    46   4e-06
AT3G08680.1 | Symbols:  | leucine-rich repeat transmembrane prot...    46   4e-06
AT1G68400.1 | Symbols:  | leucine-rich repeat transmembrane prot...    46   5e-06
AT1G33610.1 | Symbols:  | protein binding | chr1:12188910-121926...    46   5e-06

>AT5G39390.1 | Symbols:  | leucine-rich repeat family protein /
           protein kinase family protein | chr5:15763715-15765469
           REVERSE
          Length = 502

 Score = 72.0 bits (175), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 35/65 (53%), Positives = 40/65 (61%)

Query: 38  NKTDQFALLKFKEGITNYANGTFNSWNKSVPFCNWFGITCSRRHERVTSLVLQGQDLFGF 97
           N+TD  ALL+FK  +T        SWN S P C+W GITC R+ ERVTSL L G  L G 
Sbjct: 29  NETDMQALLEFKSQVTENKREVLASWNHSFPLCHWIGITCGRKQERVTSLDLGGFKLSGS 88

Query: 98  ISPYI 102
           ISP I
Sbjct: 89  ISPSI 93


>AT5G20480.1 | Symbols: EFR | EFR (EF-TU RECEPTOR); ATP binding /
           kinase/ protein serine/threonine kinase |
           chr5:6922497-6925679 FORWARD
          Length = 1031

 Score = 72.0 bits (175), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 43/90 (47%), Positives = 52/90 (57%), Gaps = 2/90 (2%)

Query: 15  SLFIVYLLLSMKLQELPAANAG-GNKTDQFALLKFKEGIT-NYANGTFNSWNKSVPFCNW 72
           S  +V+  L++ LQ    A A   N+TD  ALL+FK  ++ N       SWN S PFCNW
Sbjct: 4   SFSLVFNALTLLLQVCIFAQARFSNETDMQALLEFKSQVSENNKREVLASWNHSSPFCNW 63

Query: 73  FGITCSRRHERVTSLVLQGQDLFGFISPYI 102
            G+TC RR ERV SL L G  L G ISP I
Sbjct: 64  IGVTCGRRRERVISLNLGGFKLTGVISPSI 93


>AT3G47570.1 | Symbols:  | leucine-rich repeat transmembrane protein
           kinase, putative | chr3:17527611-17530748 FORWARD
          Length = 1010

 Score = 66.2 bits (160), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 30/65 (46%), Positives = 41/65 (63%)

Query: 38  NKTDQFALLKFKEGITNYANGTFNSWNKSVPFCNWFGITCSRRHERVTSLVLQGQDLFGF 97
           ++TD+ ALL+FK  ++       +SWN S P CNW G+TC R+++RVT L L    L G 
Sbjct: 22  DETDRQALLQFKSQVSEDKRVVLSSWNHSFPLCNWKGVTCGRKNKRVTHLELGRLQLGGV 81

Query: 98  ISPYI 102
           ISP I
Sbjct: 82  ISPSI 86


>AT3G47110.1 | Symbols:  | leucine-rich repeat transmembrane protein
           kinase, putative | chr3:17347103-17350296 REVERSE
          Length = 1025

 Score = 65.5 bits (158), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 35/100 (35%), Positives = 55/100 (55%), Gaps = 5/100 (5%)

Query: 7   LPNIVKMSSLFIVYLLLSMKLQELPAANAGG----NKTDQFALLKFKEGITNYANGTFNS 62
           +P IV M  + +  LL+S+ L+      A       +TD+ ALL+FK  ++  +     S
Sbjct: 3   VPCIV-MRLILVSALLVSVSLEHSDMVCAQTIRLTEETDKQALLEFKSQVSETSRVVLGS 61

Query: 63  WNKSVPFCNWFGITCSRRHERVTSLVLQGQDLFGFISPYI 102
           WN S+P C+W G+ C  +H RVT + L G  L G +SP++
Sbjct: 62  WNDSLPLCSWTGVKCGLKHRRVTGVDLGGLKLTGVVSPFV 101


>AT3G47580.1 | Symbols:  | leucine-rich repeat transmembrane protein
           kinase, putative | chr3:17532687-17535810 FORWARD
          Length = 1011

 Score = 64.3 bits (155), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 36/84 (42%), Positives = 50/84 (59%)

Query: 19  VYLLLSMKLQELPAANAGGNKTDQFALLKFKEGITNYANGTFNSWNKSVPFCNWFGITCS 78
           ++LLLS     L  A+   ++TD+ ALL+FK  ++       +SWN S P CNW  +TC 
Sbjct: 3   LFLLLSFSAHLLLGADGFTDETDRQALLEFKSQVSEGKRDVLSSWNNSFPLCNWKWVTCG 62

Query: 79  RRHERVTSLVLQGQDLFGFISPYI 102
           R+H+RVT L L G  L G +SP I
Sbjct: 63  RKHKRVTHLNLGGLQLGGIVSPSI 86


>AT3G47090.1 | Symbols:  | leucine-rich repeat transmembrane protein
           kinase, putative | chr3:17341512-17344645 REVERSE
          Length = 1009

 Score = 50.4 bits (119), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 26/65 (40%), Positives = 39/65 (60%)

Query: 38  NKTDQFALLKFKEGITNYANGTFNSWNKSVPFCNWFGITCSRRHERVTSLVLQGQDLFGF 97
           +++D+ ALL+ K  ++       ++WN S P C+W  + C R+H+RVT L L G  L G 
Sbjct: 22  DESDRQALLEIKSQVSESKRDALSAWNNSFPLCSWKWVRCGRKHKRVTRLDLGGLQLGGV 81

Query: 98  ISPYI 102
           ISP I
Sbjct: 82  ISPSI 86


>AT1G33590.1 | Symbols:  | disease resistance protein-related /
          LRR protein-related | chr1:12177788-12179221 FORWARD
          Length = 477

 Score = 50.1 bits (118), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 1/62 (1%)

Query: 31 PAANAGGNKTDQFALLKFKEGITNYANGTFNSWNKSVPFCNWFGITCSRRHERVTSLVLQ 90
          P   A  +  D+  LL FK GIT   +G  +SW K    C+W G+TC    +RV++L + 
Sbjct: 21 PTGAATCHPDDEAGLLAFKAGITRDPSGILSSWKKGTACCSWNGVTC-LTTDRVSALSVA 79

Query: 91 GQ 92
          GQ
Sbjct: 80 GQ 81


>AT5G65700.1 | Symbols: BAM1 | BAM1 (BARELY ANY MERISTEM 1); ATP
           binding / kinase/ protein serine/threonine kinase |
           chr5:26281826-26284945 FORWARD
          Length = 1003

 Score = 49.7 bits (117), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/64 (45%), Positives = 36/64 (56%), Gaps = 7/64 (10%)

Query: 44  ALLKFKEGIT---NYANGTFNSWNKSVPFCNWFGITC--SRRHERVTSLVLQGQDLFGFI 98
           ALL  K  +T   +  N   +SW  S  FC W G+TC  SRRH  VTSL L G +L G +
Sbjct: 28  ALLSLKTSLTGAGDDKNSPLSSWKVSTSFCTWIGVTCDVSRRH--VTSLDLSGLNLSGTL 85

Query: 99  SPYI 102
           SP +
Sbjct: 86  SPDV 89


>AT1G33670.1 | Symbols:  | leucine-rich repeat family protein |
           chr1:12201963-12203330 FORWARD
          Length = 455

 Score = 49.7 bits (117), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 39/76 (51%), Gaps = 8/76 (10%)

Query: 35  AGGNKTDQFALLKFKEGITNYANGTFNSWNKSVPFCNWFGITC--SRRHERVTSLVLQGQ 92
           A  +  D+  LL FK GIT   +G  +SW K +  C+W+GI C  +   +RVT + L G 
Sbjct: 24  ATCHPDDKAGLLAFKSGITQDPSGILSSWQKDIDCCSWYGIFCLPTIHGDRVTMMALDGN 83

Query: 93  D------LFGFISPYI 102
                  L G ISP +
Sbjct: 84  TDVGETFLSGTISPLL 99


>AT1G33600.1 | Symbols:  | leucine-rich repeat family protein |
           chr1:12180776-12182212 FORWARD
          Length = 478

 Score = 48.5 bits (114), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 36/78 (46%), Gaps = 8/78 (10%)

Query: 31  PAANAGGNKTDQFALLKFKEGITNYANGTFNSWNKSVPFCNWFGITCSRRHERVTSLVLQ 90
           P   A  +  D+  LL FK GIT    G  +SW K    C+W G+ C     RVT L + 
Sbjct: 22  PIEAATCHPDDEAGLLAFKSGITQDPTGILSSWKKGTDCCSWKGVGC--LTNRVTGLTIN 79

Query: 91  GQD------LFGFISPYI 102
           GQ       L G ISP +
Sbjct: 80  GQSDVTGSFLSGTISPSL 97


>AT3G08680.2 | Symbols:  | leucine-rich repeat transmembrane
          protein kinase, putative | chr3:2638591-2640590 FORWARD
          Length = 640

 Score = 46.2 bits (108), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 24/59 (40%), Positives = 38/59 (64%), Gaps = 4/59 (6%)

Query: 39 KTDQFALLKFKEGITNYANGTFNSWNKSVPFC-NWFGITCSRRHERVTSLVLQGQDLFG 96
          ++D+ ALL+F   + +  +   N WN ++P C +W GITCS+ + RVT+L L G  L+G
Sbjct: 26 ESDKQALLEFASLVPH--SRKLN-WNSTIPICASWTGITCSKNNARVTALRLPGSGLYG 81


>AT3G08680.1 | Symbols:  | leucine-rich repeat transmembrane
          protein kinase, putative | chr3:2638591-2640590 FORWARD
          Length = 640

 Score = 46.2 bits (108), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 24/59 (40%), Positives = 38/59 (64%), Gaps = 4/59 (6%)

Query: 39 KTDQFALLKFKEGITNYANGTFNSWNKSVPFC-NWFGITCSRRHERVTSLVLQGQDLFG 96
          ++D+ ALL+F   + +  +   N WN ++P C +W GITCS+ + RVT+L L G  L+G
Sbjct: 26 ESDKQALLEFASLVPH--SRKLN-WNSTIPICASWTGITCSKNNARVTALRLPGSGLYG 81


>AT1G68400.1 | Symbols:  | leucine-rich repeat transmembrane
          protein kinase, putative | chr1:25646401-25648916
          REVERSE
          Length = 670

 Score = 45.8 bits (107), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 25/57 (43%), Positives = 33/57 (57%), Gaps = 4/57 (7%)

Query: 40 TDQFALLKFKEGITNYANGTFNSWNKSVPFCNWFGITCSRRHERVTSLVLQGQDLFG 96
          TD   LL FK  +T  + G  NSWN +   C W G++C+R   RVT LVL+  +L G
Sbjct: 30 TDSETLLNFK--LTADSTGKLNSWNTTTNPCQWTGVSCNR--NRVTRLVLEDINLTG 82


>AT1G33610.1 | Symbols:  | protein binding | chr1:12188910-12192679
           FORWARD
          Length = 907

 Score = 45.8 bits (107), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 27/68 (39%), Positives = 35/68 (51%), Gaps = 7/68 (10%)

Query: 41  DQFALLKFKEGITNYANGTFNSWNKSVPFCNWFGITCSRRHERVTSLVLQG------QDL 94
           D+  LL FK GIT   +G  +SW K    C+W GI C    +RVT L L G      + L
Sbjct: 32  DEAGLLAFKSGITQDPSGMLSSWKKGTSCCSWKGIIC-FNSDRVTMLELVGFPKKPERSL 90

Query: 95  FGFISPYI 102
            G +SP +
Sbjct: 91  SGTLSPSL 98