Jatropha Genome Database

JcCA0302081.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0302081.20 - phase: 0 
         (231 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G62290.2 | Symbols:  | nucleotide-sensitive chloride conducta...   282   2e-76
AT5G62290.1 | Symbols:  | nucleotide-sensitive chloride conducta...   271   2e-73

>AT5G62290.2 | Symbols:  | nucleotide-sensitive chloride conductance
           regulator (ICln) family protein | chr5:25019568-25020972
           FORWARD
          Length = 228

 Score =  282 bits (721), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 145/227 (63%), Positives = 167/227 (73%), Gaps = 3/227 (1%)

Query: 1   MVLGLRQFTDRRGDGAGEPVLDTDNGEELMHVQPGVAIVIGNRSPESHGTLYISTKKVVW 60
           MV GLR FT R  DG+G+PVLD  NGEELMHVQ  VA+ +GNR  ES GTLYI+++K++W
Sbjct: 1   MVAGLRDFTLRTEDGSGKPVLDESNGEELMHVQTSVAVALGNRPIESPGTLYITSRKLIW 60

Query: 61  LSDVDRAKGYSVDFLNLSLHAVSRDPEAYSSPCIYTQIXXXXXXXXXXXXXXXXXXXXXX 120
           LSDVD AKGY+VDFL++SLHAVSRDPEAYSSPCIYTQI                      
Sbjct: 61  LSDVDMAKGYAVDFLSISLHAVSRDPEAYSSPCIYTQI--EVEEDEDDESDSESTEVLDL 118

Query: 121 XKITEMRLVPSDPSQLDTLFQIFCECAELNPEPVDEAEEEGHNWVFSADQMVDDTAELED 180
            KI EMRLVPSD +QL+TLF +FCECAELNPEPV E EE GHNWVFSADQM D     +D
Sbjct: 119 SKIREMRLVPSDSTQLETLFDVFCECAELNPEPVQEEEESGHNWVFSADQM-DVRGGDDD 177

Query: 181 SECYFSQNPTSSIGHSNGDHDVARRVLELQINDQRFEDPEEMEHGSD 227
           +E   SQ+PTS IGHSNGD  + + +LELQINDQRFED EEM H S+
Sbjct: 178 AEWQISQSPTSVIGHSNGDEGLNQPMLELQINDQRFEDAEEMVHESE 224


>AT5G62290.1 | Symbols:  | nucleotide-sensitive chloride conductance
           regulator (ICln) family protein | chr5:25019568-25020972
           FORWARD
          Length = 229

 Score =  271 bits (694), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 145/228 (63%), Positives = 167/228 (73%), Gaps = 4/228 (1%)

Query: 1   MVLGLRQFTDRRGDGAGEPVLDTDNGEELMHVQPGVAIVIGNRSPESHGTLYISTKKVVW 60
           MV GLR FT R  DG+G+PVLD  NGEELMHVQ  VA+ +GNR  ES GTLYI+++K++W
Sbjct: 1   MVAGLRDFTLRTEDGSGKPVLDESNGEELMHVQTSVAVALGNRPIESPGTLYITSRKLIW 60

Query: 61  LSDVDRAKGYSVDFLNLSLHAVSRDPEAYSSPCIYTQIXXXXXXXXXXXXXXXXXXXXXX 120
           LSDVD AKGY+VDFL++SLHAVSRDPEAYSSPCIYTQI                      
Sbjct: 61  LSDVDMAKGYAVDFLSISLHAVSRDPEAYSSPCIYTQI--EVEEDEDDESDSESTEVLDL 118

Query: 121 XKITEMRLVPSDPSQLDTLFQIFCECAELNPEPVD-EAEEEGHNWVFSADQMVDDTAELE 179
            KI EMRLVPSD +QL+TLF +FCECAELNPEPV  E EE GHNWVFSADQM D     +
Sbjct: 119 SKIREMRLVPSDSTQLETLFDVFCECAELNPEPVQEEEEESGHNWVFSADQM-DVRGGDD 177

Query: 180 DSECYFSQNPTSSIGHSNGDHDVARRVLELQINDQRFEDPEEMEHGSD 227
           D+E   SQ+PTS IGHSNGD  + + +LELQINDQRFED EEM H S+
Sbjct: 178 DAEWQISQSPTSVIGHSNGDEGLNQPMLELQINDQRFEDAEEMVHESE 225