Jatropha Genome Database

JcCA0301931.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0301931.10 + phase: 0 
         (509 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G20340.1 | Symbols:  | tyrosine decarboxylase, putative | chr...   605   e-173
AT4G28680.1 | Symbols: TYRDC, TYRDC1 | tyrosine decarboxylase, p...   586   e-167
AT4G28680.2 | Symbols: TYRDC, TYRDC1 | tyrosine decarboxylase, p...   582   e-166

>AT2G20340.1 | Symbols:  | tyrosine decarboxylase, putative |
           chr2:8779804-8782490 FORWARD
          Length = 490

 Score =  605 bits (1559), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 277/485 (57%), Positives = 365/485 (75%), Gaps = 12/485 (2%)

Query: 15  KTVNPLNADEFRRQGQMIIDFIADYYQNIEKYPVLSQVEPGYLQKRLPHSAPDNPESIET 74
           K + P+++++ R  G +++DFIADYY+ IE +PVLSQV+PGYL K LP SAPD+PE+++ 
Sbjct: 7   KVLKPMDSEQLREYGHLMVDFIADYYKTIEDFPVLSQVQPGYLHKLLPDSAPDHPETLDQ 66

Query: 75  ILQDVRKHILPGITHWQSPNYFAYFAASGSTASFLGEMLSTGFNIVGFNWLSSPAATELE 134
           +L DVR  ILPG+THWQSP++FAY+ ++ S A FLGEMLS G  IVGF+W++SPAATELE
Sbjct: 67  VLDDVRAKILPGVTHWQSPSFFAYYPSNSSVAGFLGEMLSAGLGIVGFSWVTSPAATELE 126

Query: 135 SIVMDWLGQVLQLPSCFLFSGSGGGVIQGTTCEAILCTLIAARDQMLRSIGKEKIGKLVV 194
            IV+DW+ ++L LP  F+  G+GGGVIQG+  EA+L  LIAARD++LRS+GK  + KLVV
Sbjct: 127 MIVLDWVAKLLNLPEQFMSKGNGGGVIQGSASEAVLVVLIAARDKVLRSVGKNALEKLVV 186

Query: 195 YASDQTHSALQKAAQIAGISLENFRTIKTNKSTFFSMSPDSLRVTIQSDIEKGLIPLFLC 254
           Y+SDQTHSALQKA QIAGI  EN R + T+ ST +++ P+SL+  +  D+E GLIP FLC
Sbjct: 187 YSSDQTHSALQKACQIAGIHPENCRVLTTDSSTNYALRPESLQEAVSRDLEAGLIPFFLC 246

Query: 255 ATIGTTSTTAVDPLRPLCDVAREFNIWIHVDAAYAGNACICPEFQHFLDGLEDANSFSLN 314
           A +GTTS+TAVDPL  L  +A    IW HVDAAYAG+ACICPE++ ++DG+E A+SF++N
Sbjct: 247 ANVGTTSSTAVDPLAALGKIANSNGIWFHVDAAYAGSACICPEYRQYIDGVETADSFNMN 306

Query: 315 AHKWLLTNLDCCCLWVKDPNALIKSLSTNPEYLKNKASDSAQVVDYKDWQIALSRRFRSL 374
           AHKW LTN DC  LWVKD ++L  +LSTNPE+LKNKAS +  VVDYKDWQI L RRFRSL
Sbjct: 307 AHKWFLTNFDCSLLWVKDQDSLTLALSTNPEFLKNKASQANLVVDYKDWQIPLGRRFRSL 366

Query: 375 KLWLVLRSYGVRNLRTFLGRHVEMAKVFEGLVREDKMFEIVVPRNFAMVCFRIVPGAIEM 434
           KLW+VLR YG   L++++  H+++AK FE LV +D  FEIV PR FA+VCFR+VP     
Sbjct: 367 KLWMVLRLYGSETLKSYIRNHIKLAKEFEQLVSQDPNFEIVTPRIFALVCFRLVP----- 421

Query: 435 GKDGVQMLPDREILANELNRRLLESINASGCIFMTHGMVGGVYFMRFAVGATLTEDHHVI 494
                  + D E   N  NR LL+++N+SG +FM+H  + G   +R A+GA LTE+ HV 
Sbjct: 422 -------VKDEEKKCNNRNRELLDAVNSSGKLFMSHTALSGKIVLRCAIGAPLTEEKHVK 474

Query: 495 MAWKV 499
            AWK+
Sbjct: 475 EAWKI 479


>AT4G28680.1 | Symbols: TYRDC, TYRDC1 | tyrosine decarboxylase,
           putative | chr4:14155248-14158546 FORWARD
          Length = 545

 Score =  586 bits (1511), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 273/487 (56%), Positives = 362/487 (74%), Gaps = 16/487 (3%)

Query: 17  VNPLNADEFRRQGQMIIDFIADYYQNIEK----YPVLSQVEPGYLQKRLPHSAPDNPESI 72
           + P++++  R QG +++DFIADYY+N++     +PVLSQV+PGYL+  LP SAP+ PES+
Sbjct: 57  MKPMDSELLREQGHIMVDFIADYYKNLQDSPQDFPVLSQVQPGYLRDMLPDSAPERPESL 116

Query: 73  ETILQDVRKHILPGITHWQSPNYFAYFAASGSTASFLGEMLSTGFNIVGFNWLSSPAATE 132
           + +L DV K I+PGITHWQSP+YFAY+A+S S A FLGEML+ G ++VGF WL+SPAATE
Sbjct: 117 KELLDDVSKKIMPGITHWQSPSYFAYYASSTSVAGFLGEMLNAGLSVVGFTWLTSPAATE 176

Query: 133 LESIVMDWLGQVLQLPSCFLFSGSGGGVIQGTTCEAILCTLIAARDQMLRSIGKEKIGKL 192
           LE IV+DWL ++LQLP  FL +G+GGGVIQGT CEA+L  ++AARD++L+ +GK  + +L
Sbjct: 177 LEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTLLPQL 236

Query: 193 VVYASDQTHSALQKAAQIAGISLENFRTIKTNKSTFFSMSPDSLRVTIQSDIEKGLIPLF 252
           VVY SDQTHS+ +KA  I GI  EN R +KT+ ST + M P+SL   I  D+ KG IP F
Sbjct: 237 VVYGSDQTHSSFRKACLIGGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFF 296

Query: 253 LCATIGTTSTTAVDPLRPLCDVAREFNIWIHVDAAYAGNACICPEFQHFLDGLEDANSFS 312
           +CAT+GTTS+ AVDPL PL ++A+++ IW+HVDAAYAGNACICPE++ F+DG+E+A+SF+
Sbjct: 297 ICATVGTTSSAAVDPLVPLGNIAKKYGIWLHVDAAYAGNACICPEYRKFIDGIENADSFN 356

Query: 313 LNAHKWLLTNLDCCCLWVKDPNALIKSLSTNPEYLKNKASDSAQVVDYKDWQIALSRRFR 372
           +NAHKWL  N  C  LWVKD  +LI +L TNPEYL+ K S    VV+YKDWQI+LSRRFR
Sbjct: 357 MNAHKWLFANQTCSPLWVKDRYSLIDALKTNPEYLEFKVSKKDTVVNYKDWQISLSRRFR 416

Query: 373 SLKLWLVLRSYGVRNLRTFLGRHVEMAKVFEGLVREDKMFEIVVPRNFAMVCFRIVPGAI 432
           SLKLW+VLR YG  NLR F+  HV +AK FE  V +D  FE+V  R F++VCFR+ P   
Sbjct: 417 SLKLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQDPSFEVVTTRYFSLVCFRLAP--- 473

Query: 433 EMGKDGVQMLPDREILANELNRRLLESINASGCIFMTHGMVGGVYFMRFAVGATLTEDHH 492
               DG       E   NE NR LL ++N++G IF++H  + G + +RFAVGA LTE+ H
Sbjct: 474 ---VDG------DEDQCNERNRELLAAVNSTGKIFISHTALSGKFVLRFAVGAPLTEEKH 524

Query: 493 VIMAWKV 499
           V  AW++
Sbjct: 525 VTEAWQI 531


>AT4G28680.2 | Symbols: TYRDC, TYRDC1 | tyrosine decarboxylase,
           putative | chr4:14155248-14158546 FORWARD
          Length = 547

 Score =  582 bits (1501), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 274/489 (56%), Positives = 362/489 (74%), Gaps = 18/489 (3%)

Query: 17  VNPLNADEFRRQGQMIIDFIADYYQNIEK----YPVLSQVEPGYLQKRLPHSAPDNPESI 72
           + P++++  R QG +++DFIADYY+N++     +PVLSQV+PGYL+  LP SAP+ PES+
Sbjct: 57  MKPMDSELLREQGHIMVDFIADYYKNLQDSPQDFPVLSQVQPGYLRDMLPDSAPERPESL 116

Query: 73  ETILQDVRKHILPGITHWQSPNYFAYFAASGSTASFLGEMLSTGFNIVGFNWLSSPAATE 132
           + +L DV K I+PGITHWQSP+YFAY+A+S S A FLGEML+ G ++VGF WL+SPAATE
Sbjct: 117 KELLDDVSKKIMPGITHWQSPSYFAYYASSTSVAGFLGEMLNAGLSVVGFTWLTSPAATE 176

Query: 133 LESIVMDWLGQVLQLPSCFLFSGSGGGVIQGTTCEAILCTLIAARDQMLRSIGKEKIGKL 192
           LE IV+DWL ++LQLP  FL +G+GGGVIQGT CEA+L  ++AARD++L+ +GK  + +L
Sbjct: 177 LEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTLLPQL 236

Query: 193 VVYASDQTHSALQKAAQIAGISLENFRTIKTNKSTFFSMSPDSLRVTIQSDIEKGLIPLF 252
           VVY SDQTHS+ +KA  I GI  EN R +KT+ ST + M P+SL   I  D+ KG IP F
Sbjct: 237 VVYGSDQTHSSFRKACLIGGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFF 296

Query: 253 LCATIGTTSTTAVDPLRPLCDVAREFNIWIHVDAAYAGNACICPEFQHFLDGLEDANSFS 312
           +CAT+GTTS+ AVDPL PL ++A+++ IW+HVDAAYAGNACICPE++ F+DG+E+A+SF+
Sbjct: 297 ICATVGTTSSAAVDPLVPLGNIAKKYGIWLHVDAAYAGNACICPEYRKFIDGIENADSFN 356

Query: 313 LNAHKWLLTNLDCCCLWVKDPNALIKSLSTNPEYL--KNKASDSAQVVDYKDWQIALSRR 370
           +NAHKWL  N  C  LWVKD  +LI +L TNPEYL  K K S    VV+YKDWQI+LSRR
Sbjct: 357 MNAHKWLFANQTCSPLWVKDRYSLIDALKTNPEYLEFKVKVSKKDTVVNYKDWQISLSRR 416

Query: 371 FRSLKLWLVLRSYGVRNLRTFLGRHVEMAKVFEGLVREDKMFEIVVPRNFAMVCFRIVPG 430
           FRSLKLW+VLR YG  NLR F+  HV +AK FE  V +D  FE+V  R F++VCFR+ P 
Sbjct: 417 FRSLKLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQDPSFEVVTTRYFSLVCFRLAP- 475

Query: 431 AIEMGKDGVQMLPDREILANELNRRLLESINASGCIFMTHGMVGGVYFMRFAVGATLTED 490
                 DG       E   NE NR LL ++N++G IF++H  + G + +RFAVGA LTE+
Sbjct: 476 -----VDG------DEDQCNERNRELLAAVNSTGKIFISHTALSGKFVLRFAVGAPLTEE 524

Query: 491 HHVIMAWKV 499
            HV  AW++
Sbjct: 525 KHVTEAWQI 533