Jatropha Genome Database

JcCA0299751.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0299751.20 + phase: 0 /partial
         (244 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G17570.1 | Symbols:  | undecaprenyl pyrophosphate synthetase ...   248   3e-66
AT5G60510.1 | Symbols:  | undecaprenyl pyrophosphate synthetase ...   180   6e-46
AT5G60500.1 | Symbols:  | undecaprenyl pyrophosphate synthetase ...   176   2e-44
AT5G58780.1 | Symbols:  | dehydrodolichyl diphosphate synthase, ...    92   4e-19
AT2G23410.1 | Symbols: ACPT | ACPT (Arabidopsis cis-prenyltransf...    89   3e-18
AT5G58770.1 | Symbols:  | dehydrodolichyl diphosphate synthase, ...    89   3e-18
AT5G58784.1 | Symbols:  | dehydrodolichyl diphosphate synthase |...    86   3e-17
AT5G58782.1 | Symbols:  | dehydrodolichyl diphosphate synthase, ...    85   5e-17
AT2G23400.1 | Symbols:  | dehydrodolichyl diphosphate synthase, ...    78   5e-15

>AT2G17570.1 | Symbols:  | undecaprenyl pyrophosphate synthetase
           family protein / UPP synthetase family protein |
           chr2:7645086-7645973 FORWARD
          Length = 295

 Score =  248 bits (632), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 116/183 (63%), Positives = 148/183 (80%)

Query: 12  RVSELFGNLGGLLRICLFRILSMGPIPSHFAFIMDGNRRYAKKGNLKLGAGHRAGFESLI 71
           R+S+L   + G  R  LFR++SMGPIP H AFIMDGNRRYAKK  L  G+GH+AGF +L+
Sbjct: 14  RMSQLLEQIYGFSRRSLFRVISMGPIPCHIAFIMDGNRRYAKKCGLLDGSGHKAGFSALM 73

Query: 72  SILKYCYELGVKYVTIYAFSIDNFKRRPDEVKDLMDLMLEKIDELLKEESMAKQYGIRVY 131
           S+L+YCYELG+KYVTIYAFSIDNF+R+P+EV+ +MDLMLEKI  LL++ES+  QYGIRVY
Sbjct: 74  SMLQYCYELGIKYVTIYAFSIDNFRRKPEEVESVMDLMLEKIKSLLEKESIVHQYGIRVY 133

Query: 132 FIGNLKLLSENVRIAAEKVMRATANNTKCTLLICLAYTSRDEILHAVQDSCKNKWEEIQP 191
           FIGNL LL++ VR AAEKVM+ATA N++  LLIC+AY S DEI+ AV+ SC NK + I+ 
Sbjct: 134 FIGNLALLNDQVRAAAEKVMKATAKNSRVVLLICIAYNSTDEIVQAVKKSCINKSDNIEA 193

Query: 192 LSF 194
            ++
Sbjct: 194 SNY 196


>AT5G60510.1 | Symbols:  | undecaprenyl pyrophosphate synthetase
           family protein / UPP synthetase family protein |
           chr5:24330721-24331539 FORWARD
          Length = 272

 Score =  180 bits (457), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 87/183 (47%), Positives = 126/183 (68%), Gaps = 1/183 (0%)

Query: 4   NEMTKHSSRVSELFGNLGGLLRICLFRILSMGPIPSHFAFIMDGNRRYAKKGNLK-LGAG 62
           N   +     +++F  L  L+R  +F++L +GPIP++ +FIMDGNRR+AKK NL+ L AG
Sbjct: 2   NNTREEVGEFTQIFNALMSLMRKFIFKVLRVGPIPTNISFIMDGNRRFAKKRNLEGLDAG 61

Query: 63  HRAGFESLISILKYCYELGVKYVTIYAFSIDNFKRRPDEVKDLMDLMLEKIDELLKEESM 122
           HRAGF S+  IL+YC E+GV YVT+YAF +DNFKR P+EVK +MDLMLEK++  + +   
Sbjct: 62  HRAGFISVKYILQYCKEIGVPYVTLYAFGMDNFKRGPEEVKCVMDLMLEKVELTIDQAVS 121

Query: 123 AKQYGIRVYFIGNLKLLSENVRIAAEKVMRATANNTKCTLLICLAYTSRDEILHAVQDSC 182
               G+R+ F G+L  L+E  R A +K+M  T  N    +++C+AY++  EI+HAV+DSC
Sbjct: 122 GNMNGVRIIFAGDLNSLNERFRAATKKLMELTEENRDLIVVVCVAYSTSVEIVHAVRDSC 181

Query: 183 KNK 185
             K
Sbjct: 182 VRK 184


>AT5G60500.1 | Symbols:  | undecaprenyl pyrophosphate synthetase
           family protein / UPP synthetase family protein |
           chr5:24328815-24329630 FORWARD
          Length = 271

 Score =  176 bits (445), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 86/173 (49%), Positives = 122/173 (70%), Gaps = 1/173 (0%)

Query: 14  SELFGNLGGLLRICLFRILSMGPIPSHFAFIMDGNRRYAKKGNL-KLGAGHRAGFESLIS 72
           + +F  L  L+R  LFR+L +GPIP++ +FIMDGNRR+AKK NL  L AGHRAGF S+  
Sbjct: 11  THIFNALMSLMRKFLFRVLCVGPIPTNISFIMDGNRRFAKKHNLIGLDAGHRAGFISVKY 70

Query: 73  ILKYCYELGVKYVTIYAFSIDNFKRRPDEVKDLMDLMLEKIDELLKEESMAKQYGIRVYF 132
           IL+YC E+GV YVT++AF +DNFKR P+EVK +MDLMLEK++  + +       G+R+ F
Sbjct: 71  ILQYCKEIGVPYVTLHAFGMDNFKRGPEEVKCVMDLMLEKVELAIDQAVSGNMNGVRIIF 130

Query: 133 IGNLKLLSENVRIAAEKVMRATANNTKCTLLICLAYTSRDEILHAVQDSCKNK 185
            G+L  L+E+ R A +K+M  T  N    +++C+AY++  EI+HAV+ SC  K
Sbjct: 131 AGDLDSLNEHFRAATKKLMELTEENRDLIVVVCVAYSTSLEIVHAVRKSCVRK 183


>AT5G58780.1 | Symbols:  | dehydrodolichyl diphosphate synthase,
           putative / DEDOL-PP synthase, putative |
           chr5:23735755-23737284 REVERSE
          Length = 302

 Score = 91.7 bits (226), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 55/152 (36%), Positives = 83/152 (54%), Gaps = 11/152 (7%)

Query: 37  IPSHFAFIMDGNRRYAKKGNLKLGAGHRAGFESLISILKYCYELGVKYVTIYAFSIDNFK 96
           +P H A IMDGNRR+AK+  L    GH AG + LI   + C++LG+  V+ +AFS +N+ 
Sbjct: 70  MPRHVAVIMDGNRRWAKRAGLLTSQGHEAGAKRLIEFSELCFKLGIHTVSAFAFSTENWG 129

Query: 97  RRPDEVKDLMDL----MLEKIDELLKEESMAKQYGIRVYFIGNLKLLSENVRIAAEKVMR 152
           R   EVK LM L    +  KI    +EE+       RV  IGNL  + E++    +++  
Sbjct: 130 RHKIEVKCLMSLIQHYLKSKIQYFQREET-------RVSVIGNLTKIPESLLRTVQEIEE 182

Query: 153 ATANNTKCTLLICLAYTSRDEILHAVQDSCKN 184
           AT +  K  L++ + Y+ R +IL A +   K 
Sbjct: 183 ATRSYKKKHLILAIDYSGRLDILRACKSIVKK 214


>AT2G23410.1 | Symbols: ACPT | ACPT (Arabidopsis
           cis-prenyltransferase); dehydrodolichyl diphosphate
           synthase | chr2:9966247-9967741 REVERSE
          Length = 303

 Score = 88.6 bits (218), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 51/150 (34%), Positives = 83/150 (55%), Gaps = 8/150 (5%)

Query: 37  IPSHFAFIMDGNRRYAKKGNLKLGAGHRAGFESLISILKYCYELGVKYVTIYAFSIDNFK 96
           +P H AFI+DGNRR+AK+  L    GH AG + LI I + C+ELGV  V+ +AFS +N+ 
Sbjct: 70  MPRHVAFILDGNRRWAKRAGLTTSQGHEAGAKRLIDIAELCFELGVHTVSAFAFSTENWG 129

Query: 97  RRPDEVKDLMDLMLEKIDELLKEESMAKQYG---IRVYFIGNLKLLSENVRIAAEKVMRA 153
           R   E+ +LM L+     +  + +S  K +    +RV  IGN   + E++     ++  A
Sbjct: 130 RDKIEIDNLMSLI-----QHYRNKSNIKFFHRSEVRVSVIGNKTKIPESLLKEIHEIEEA 184

Query: 154 TANNTKCTLLICLAYTSRDEILHAVQDSCK 183
           T       L++ + Y+ + +I+HA +   K
Sbjct: 185 TKGYKNKHLIMAVDYSGKFDIMHACKSLVK 214


>AT5G58770.1 | Symbols:  | dehydrodolichyl diphosphate synthase,
           putative / DEDOL-PP synthase, putative |
           chr5:23734396-23735495 FORWARD
          Length = 310

 Score = 88.6 bits (218), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 49/143 (34%), Positives = 82/143 (57%), Gaps = 7/143 (4%)

Query: 37  IPSHFAFIMDGNRRYAKKGNLKLGAGHRAGFESLISILKYCYELGVKYVTIYAFSIDNFK 96
           +P H A IMDGN R+AK   L+   GHRAG E+L  I++ C + G++ +T++AFS DN+ 
Sbjct: 77  MPKHVAIIMDGNGRWAKNRGLQPWDGHRAGVEALKEIVELCGKWGIQVLTVFAFSTDNWI 136

Query: 97  RRPDEVKDLMDLMLEKIDELLKEE--SMAKQYGIRVYFIGNLKLLSENVRIAAEKVMRAT 154
           R   E+    D +    +  LK E  ++AK   +R+  IG+   L +++     +V   T
Sbjct: 137 RPRIEI----DFLFSLFERSLKTEFQNLAKN-NVRISIIGDSSKLPKSLLRVINEVEEVT 191

Query: 155 ANNTKCTLLICLAYTSRDEILHA 177
            NNT+  L++ + Y+ + ++L A
Sbjct: 192 KNNTRLQLIVAVGYSGKYDVLQA 214


>AT5G58784.1 | Symbols:  | dehydrodolichyl diphosphate synthase |
           chr5:23739950-23741267 REVERSE
          Length = 302

 Score = 85.5 bits (210), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 55/149 (36%), Positives = 82/149 (55%), Gaps = 4/149 (2%)

Query: 37  IPSHFAFIMDGNRRYAKKGNLKLGAGHRAGFESLISILKYCYELGVKYVTIYAFSIDNFK 96
           +P H A I+DGNRR+A+K  L    GH AG   L+   K C+ +G   ++++AFS +N++
Sbjct: 70  MPKHVAVILDGNRRWAEKRGLGTSEGHEAGARRLMENAKDCFAMGTNTISLFAFSTENWE 129

Query: 97  RRPDEVKDLMDLMLEKIDELLKEESMAKQYGIRVYFIGNLKLLSENVRIAAEKVMRATAN 156
           R  DEVK LM L  EK   L  +    +   I++  IGN   L E++    E+V  AT +
Sbjct: 130 RPEDEVKCLMAL-FEKY--LASDMPYLRSDKIKISVIGNRTKLPESLLGLIEEVEEATKS 186

Query: 157 NTKCTLLICLAYTSRDEILHAVQDSCKNK 185
                L+I + Y+ R +IL A + S  NK
Sbjct: 187 YEGKNLIIAIDYSGRYDILQACK-SLANK 214


>AT5G58782.1 | Symbols:  | dehydrodolichyl diphosphate synthase,
           putative / DEDOL-PP synthase, putative |
           chr5:23738306-23739430 REVERSE
          Length = 289

 Score = 84.7 bits (208), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 52/148 (35%), Positives = 80/148 (54%), Gaps = 7/148 (4%)

Query: 37  IPSHFAFIMDGNRRYAKKGNLKLGAGHRAGFESLISILKYCYELGVKYVTIYAFSIDNFK 96
           +P H A IMDGNRR+AK+  L    G+ AG + L+     C++LG+  V+ +AFS +N+ 
Sbjct: 57  MPRHVAVIMDGNRRWAKQTGLLTSQGYEAGAKRLLEFADLCFKLGINTVSAFAFSTENWG 116

Query: 97  RRPDEVKDLMDLMLEKIDELLKEESMAKQYGIRVYFIGNLKLLSENVRIAAEKVMRATAN 156
           R   EVK LM L    +   ++     +   IRV  IGNL  + E++     ++  AT +
Sbjct: 117 RHKIEVKCLMYLFQRYLKSKIQ---FFQSKEIRVSVIGNLAKIPESLLRTVHELEEATKS 173

Query: 157 NTKCTLLICLAYTSRDEILHAVQDSCKN 184
             K  L++ + Y+ R +IL A    CKN
Sbjct: 174 YKKKHLILAIDYSGRFDILGA----CKN 197


>AT2G23400.1 | Symbols:  | dehydrodolichyl diphosphate synthase,
           putative / DEDOL-PP synthase, putative |
           chr2:9963978-9965229 REVERSE
          Length = 253

 Score = 77.8 bits (190), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 44/119 (36%), Positives = 67/119 (56%), Gaps = 5/119 (4%)

Query: 37  IPSHFAFIMDGNRRYAKKGNLKLGAGHRAGFESLISILKYCYELGVKYVTIYAFSIDNFK 96
           +P H +FI+DGNRR+AK+  L    GH AG + +I I + C+ELG+  V+ +AFS +N+ 
Sbjct: 36  MPRHVSFILDGNRRWAKRDGLTTAQGHEAGTKRIIEIAEVCFELGIHTVSAFAFSTENWG 95

Query: 97  RRPDEVKDLMDLMLEKIDELLKEE-SMAKQYGIRVYFIGNLKLLSENVRIAAEKVMRAT 154
           R   EVK LM L     +  LK      ++  +RV  IGN   + E++     ++  AT
Sbjct: 96  RDKFEVKCLMSLF----NHYLKSNIQYFQRKEVRVSVIGNKTKIPESLLKEIHEIEEAT 150