Jatropha Genome Database

JcCA0299021.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0299021.10 + phase: 0 
         (337 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G03880.1 | Symbols:  | electron carrier | chr5:1038674-104145...   357   9e-99
AT4G10000.2 | Symbols:  | electron carrier/ protein disulfide ox...   126   2e-29
AT4G10000.1 | Symbols:  | electron carrier/ protein disulfide ox...   126   2e-29

>AT5G03880.1 | Symbols:  | electron carrier | chr5:1038674-1041453
           REVERSE
          Length = 339

 Score =  357 bits (915), Expect = 9e-99,   Method: Compositional matrix adjust.
 Identities = 173/244 (70%), Positives = 194/244 (79%), Gaps = 9/244 (3%)

Query: 69  AIKSGQFLNILGAAPALFFRLGTGVFVNGYSASFVSKNEIPPGQYALEVAGYKVKESSKV 128
           A+KSG+  ++LGAA  LFFR GTGVFV+GYSASFVSK EIP  QYAL + G  VKE++KV
Sbjct: 76  AVKSGKLFDVLGAAIGLFFRFGTGVFVSGYSASFVSKEEIPADQYALRLGGITVKETAKV 135

Query: 129 GPRPEKPIEIYEFESFLLMFASNCKYV-QVREIVSVLDIDVLFYPCPKNGPTFRPKVVQM 187
           GPRPEKPIEIYEFE         C +  +VRE+V+VLD+D+L+YPCP+  P FRPKV QM
Sbjct: 136 GPRPEKPIEIYEFE--------GCPFCRKVREMVAVLDLDILYYPCPRGSPNFRPKVKQM 187

Query: 188 GGKQQFPYMVDPNTGTAMYESDDIIKYLVEKYGDGTVPFMXXXXXXXXXXEGFAMIGRMG 247
           GGKQQFPYMVDPNTG +MYESD IIKYL EKYGDGTVP             GFAMIGRMG
Sbjct: 188 GGKQQFPYMVDPNTGVSMYESDGIIKYLSEKYGDGTVPLSLSLGALTAITAGFAMIGRMG 247

Query: 248 KGSSYTPSKLPPKPLEIWSYEGSPFCKIVREALVESELPHIQRSCARGSPKRQALYEKAG 307
           KG+ YTP+KLPPKPLE W+YEGSPFCK+VRE LVE ELPHIQRSCARGSPKRQ L EKAG
Sbjct: 248 KGNLYTPAKLPPKPLEFWAYEGSPFCKLVREVLVELELPHIQRSCARGSPKRQVLLEKAG 307

Query: 308 HFQV 311
           HFQV
Sbjct: 308 HFQV 311



 Score = 54.7 bits (130), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 8/88 (9%)

Query: 132 PEKPIEIYEFESFLLMFASNCKYVQVREIVSVLDIDVLFYPCPKNGPTFRPKVVQMGGKQ 191
           P KP+E + +E      +  CK V  RE++  L++  +   C +  P  R  +++  G  
Sbjct: 258 PPKPLEFWAYEG-----SPFCKLV--REVLVELELPHIQRSCARGSPK-RQVLLEKAGHF 309

Query: 192 QFPYMVDPNTGTAMYESDDIIKYLVEKY 219
           Q PY+ DPNTG AM+ES +I++YL + Y
Sbjct: 310 QVPYLEDPNTGVAMFESAEIVEYLKQTY 337


>AT4G10000.2 | Symbols:  | electron carrier/ protein disulfide
           oxidoreductase | chr4:6260707-6263053 REVERSE
          Length = 333

 Score =  126 bits (316), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 72/193 (37%), Positives = 110/193 (56%), Gaps = 15/193 (7%)

Query: 124 ESSKVGPRPEKPIEIYEFESFLLMFASNCKYVQ-VREIVSVLDIDVLFYPCPKNGPTFRP 182
           ++  V   P   ++++EFE+        C + + VRE ++ LD+ V  YPCPK     R 
Sbjct: 119 DNQDVSSNPPLRLQLFEFEA--------CPFCRRVREAMTELDLSVEVYPCPKGSIRHRE 170

Query: 183 KVVQMGGKQQFPYMVDPNTGTAMYESDDIIKYLVEKYGDGTVPFMXXXXXXXXXXEGFA- 241
            V + GGK+ FP++VDPNT T MYES DI+KYL ++YG+G  P             G+  
Sbjct: 171 LVRRSGGKEMFPFLVDPNTETLMYESGDIVKYLFKQYGNGRGP--STGLLESTLFTGWMP 228

Query: 242 MIGRMGKGSSY---TPSKLPPKPLEIWSYEGSPFCKIVREALVESELPHIQRSCARGSPK 298
            + R G+G S      + LPPK LE++SYE +P+ ++VREAL E ELP++  +   GS +
Sbjct: 229 TLLRAGRGMSLWDKASTDLPPKMLELFSYENNPYSRLVREALCELELPYVLHNIGEGSTR 288

Query: 299 RQALYEKAGHFQV 311
            ++L   +G  +V
Sbjct: 289 MKSLLNASGSNKV 301


>AT4G10000.1 | Symbols:  | electron carrier/ protein disulfide
           oxidoreductase | chr4:6260707-6263053 REVERSE
          Length = 333

 Score =  126 bits (316), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 72/193 (37%), Positives = 110/193 (56%), Gaps = 15/193 (7%)

Query: 124 ESSKVGPRPEKPIEIYEFESFLLMFASNCKYVQ-VREIVSVLDIDVLFYPCPKNGPTFRP 182
           ++  V   P   ++++EFE+        C + + VRE ++ LD+ V  YPCPK     R 
Sbjct: 119 DNQDVSSNPPLRLQLFEFEA--------CPFCRRVREAMTELDLSVEVYPCPKGSIRHRE 170

Query: 183 KVVQMGGKQQFPYMVDPNTGTAMYESDDIIKYLVEKYGDGTVPFMXXXXXXXXXXEGFA- 241
            V + GGK+ FP++VDPNT T MYES DI+KYL ++YG+G  P             G+  
Sbjct: 171 LVRRSGGKEMFPFLVDPNTETLMYESGDIVKYLFKQYGNGRGP--STGLLESTLFTGWMP 228

Query: 242 MIGRMGKGSSY---TPSKLPPKPLEIWSYEGSPFCKIVREALVESELPHIQRSCARGSPK 298
            + R G+G S      + LPPK LE++SYE +P+ ++VREAL E ELP++  +   GS +
Sbjct: 229 TLLRAGRGMSLWDKASTDLPPKMLELFSYENNPYSRLVREALCELELPYVLHNIGEGSTR 288

Query: 299 RQALYEKAGHFQV 311
            ++L   +G  +V
Sbjct: 289 MKSLLNASGSNKV 301