Jatropha Genome Database

JcCA0297261.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0297261.10 + phase: 0 /partial
         (72 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G40390.1 | Symbols: SIP1 | SIP1 (seed imbibition 1-like); gal...    74   1e-14

>AT5G40390.1 | Symbols: SIP1 | SIP1 (seed imbibition 1-like);
           galactinol-sucrose galactosyltransferase/ hydrolase,
           hydrolyzing O-glycosyl compounds |
           chr5:16161720-16165085 FORWARD
          Length = 783

 Score = 74.3 bits (181), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 36/72 (50%), Positives = 52/72 (72%), Gaps = 2/72 (2%)

Query: 1   MLNSGGAIQSLDIDDDKNLVRIGVKGRGEMKVFASEKPVACKLDGVDVQFSYDDQVVVIQ 60
           MLN+ GAI+SL  +D+   V +GV G GE +V+AS+KPV+C +DG  V+F Y+D +V++Q
Sbjct: 710 MLNTSGAIRSLVYNDES--VEVGVFGAGEFRVYASKKPVSCLIDGEVVEFGYEDSMVMVQ 767

Query: 61  VPWPNSSRLSAI 72
           VPW     LS+I
Sbjct: 768 VPWSGPDGLSSI 779