Jatropha Genome Database

JcCA0297121.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0297121.20 - phase: 2 /partial
         (97 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G12050.1 | Symbols:  | fumarylacetoacetase, putative | chr1:4...   118   8e-28

>AT1G12050.1 | Symbols:  | fumarylacetoacetase, putative |
           chr1:4072904-4075856 FORWARD
          Length = 421

 Score =  118 bits (295), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 54/63 (85%), Positives = 58/63 (92%)

Query: 1   TINGCNLRPGDLLGTGTISGPEPESYGCLLELTWNGQKPLSLNGATRKFLEDGDEVIFSG 60
           T+NGCNLRPGDLLGTGTISGPEP+SYGCLLELTWNGQKPLSLNG T+ FLEDGD+V FSG
Sbjct: 339 TVNGCNLRPGDLLGTGTISGPEPDSYGCLLELTWNGQKPLSLNGTTQTFLEDGDQVTFSG 398

Query: 61  FSK 63
             K
Sbjct: 399 VCK 401