Jatropha Genome Database

JcCA0296331.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0296331.10 + phase: 0 /partial
         (197 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G30000.1 | Symbols:  | glycoside hydrolase family 47 protein ...   335   1e-92
AT3G21160.1 | Symbols:  | mannosyl-oligosaccharide 1,2-alpha-man...   152   9e-38
AT1G51590.2 | Symbols:  | mannosyl-oligosaccharide 1,2-alpha-man...   145   2e-35
AT1G51590.1 | Symbols:  | mannosyl-oligosaccharide 1,2-alpha-man...   144   3e-35
AT1G27520.1 | Symbols:  | glycoside hydrolase family 47 protein ...    75   2e-14
AT5G43710.1 | Symbols:  | glycoside hydrolase family 47 protein ...    68   3e-12

>AT1G30000.1 | Symbols:  | glycoside hydrolase family 47 protein |
           chr1:10509532-10512320 REVERSE
          Length = 624

 Score =  335 bits (859), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 158/195 (81%), Positives = 176/195 (90%)

Query: 1   VCFLPGTLALGATKGITKEKAMKANLLKFEDLENLKLAEDLAKTCFEMYSVTSTGLAPEI 60
           VCFLPGTLALGATKG+TKE+A+K NLL FEDLENLKLAEDLAKTCFEMY VT+TGLAPEI
Sbjct: 427 VCFLPGTLALGATKGLTKEQALKENLLSFEDLENLKLAEDLAKTCFEMYEVTATGLAPEI 486

Query: 61  AYFHTKEYSEAGLNGGNKSSKFXXXXXXKHADRHNLLRPETVESLFVLYRITQDPKYREW 120
           AYFHTK+Y+E GL+GGNKSS +      K ADRHNLLRPETVESLFVLYRIT+D KYR+ 
Sbjct: 487 AYFHTKDYTEDGLDGGNKSSMYANDIIIKPADRHNLLRPETVESLFVLYRITKDTKYRDQ 546

Query: 121 GWQIFEAFEKYTKVESAGYSSLEDVTMLPPRRRDKMETFYLGETLKYLYLLFGDTNIIPL 180
           GWQIFEAFEKYTKV+S GY+SL+DVT +PP RRDKMETF+LGETLKYLYLLFGD ++IPL
Sbjct: 547 GWQIFEAFEKYTKVKSGGYTSLDDVTEVPPHRRDKMETFFLGETLKYLYLLFGDDSVIPL 606

Query: 181 DKFVFNTEAHPFPIK 195
           DKFVFNTEAHP PI+
Sbjct: 607 DKFVFNTEAHPLPIR 621


>AT3G21160.1 | Symbols:  | mannosyl-oligosaccharide
           1,2-alpha-mannosidase, putative | chr3:7414129-7418328
           REVERSE
          Length = 572

 Score =  152 bits (385), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 91/195 (46%), Positives = 116/195 (59%), Gaps = 32/195 (16%)

Query: 1   VCFLPGTLALGATKGITKEKAMKANLLKFEDLENLKLAEDLAKTCFEMYSVTSTGLAPEI 60
            CF PG LALGA+ G +     K    KF     L LAE+LA TC+  Y  T T LA E 
Sbjct: 376 ACFAPGMLALGAS-GYSDPAEGK----KF-----LTLAEELAWTCYNFYQSTPTKLAGEN 425

Query: 61  AYFHTKEYSEAGLNGGNKSSKFXXXXXXKHADRHNLLRPETVESLFVLYRITQDPKYREW 120
            +F++      G +                    N+LRPETVESLF L+R+T +  Y+EW
Sbjct: 426 YFFNSGSDMSVGTS-------------------WNILRPETVESLFYLWRLTGNKTYQEW 466

Query: 121 GWQIFEAFEKYTKVESAGYSSLEDVTMLPPRRRDKMETFYLGETLKYLYLLFGDTNIIPL 180
           GW IFEAFEK +++ES GY  L+DV      + +KM++F+L ETLKYLYLLF  T +IPL
Sbjct: 467 GWNIFEAFEKNSRIES-GYVGLKDVNT--GVKDNKMQSFFLAETLKYLYLLFSPTTVIPL 523

Query: 181 DKFVFNTEAHPFPIK 195
           D++VFNTEAHP  IK
Sbjct: 524 DEWVFNTEAHPLKIK 538


>AT1G51590.2 | Symbols:  | mannosyl-oligosaccharide
           1,2-alpha-mannosidase, putative | chr1:19128315-19131406
           REVERSE
          Length = 456

 Score =  145 bits (365), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 88/195 (45%), Positives = 114/195 (58%), Gaps = 35/195 (17%)

Query: 1   VCFLPGTLALGATK-GITKEKAMKANLLKFEDLENLKLAEDLAKTCFEMYSVTSTGLAPE 59
            CF PG LALGA+  G  +EK       KF     L LA +LA TC+  Y  T T LA E
Sbjct: 272 ACFAPGMLALGASGYGPDEEK-------KF-----LSLAGELAWTCYNFYQSTPTKLAGE 319

Query: 60  IAYFHTKEYSEAGLNGGNKSSKFXXXXXXKHADRHNLLRPETVESLFVLYRITQDPKYRE 119
             +F   +    G +                    N+LRPETVESLF L+R+T +  Y+E
Sbjct: 320 NYFFTAGQDMSVGTS-------------------WNILRPETVESLFYLWRLTGNKTYQE 360

Query: 120 WGWQIFEAFEKYTKVESAGYSSLEDVTMLPPRRRDKMETFYLGETLKYLYLLFGDTNIIP 179
           WGW IF+AFEK ++VES GY  L+DV      + +KM++F+L ETLKYLYLLF  +++I 
Sbjct: 361 WGWNIFQAFEKNSRVES-GYVGLKDVNT--GAKDNKMQSFFLAETLKYLYLLFSPSSVIS 417

Query: 180 LDKFVFNTEAHPFPI 194
           LD++VFNTEAHP  I
Sbjct: 418 LDEWVFNTEAHPLKI 432


>AT1G51590.1 | Symbols:  | mannosyl-oligosaccharide
           1,2-alpha-mannosidase, putative | chr1:19128315-19132132
           REVERSE
          Length = 560

 Score =  144 bits (364), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 88/195 (45%), Positives = 114/195 (58%), Gaps = 35/195 (17%)

Query: 1   VCFLPGTLALGATK-GITKEKAMKANLLKFEDLENLKLAEDLAKTCFEMYSVTSTGLAPE 59
            CF PG LALGA+  G  +EK       KF     L LA +LA TC+  Y  T T LA E
Sbjct: 376 ACFAPGMLALGASGYGPDEEK-------KF-----LSLAGELAWTCYNFYQSTPTKLAGE 423

Query: 60  IAYFHTKEYSEAGLNGGNKSSKFXXXXXXKHADRHNLLRPETVESLFVLYRITQDPKYRE 119
             +F   +    G +                    N+LRPETVESLF L+R+T +  Y+E
Sbjct: 424 NYFFTAGQDMSVGTS-------------------WNILRPETVESLFYLWRLTGNKTYQE 464

Query: 120 WGWQIFEAFEKYTKVESAGYSSLEDVTMLPPRRRDKMETFYLGETLKYLYLLFGDTNIIP 179
           WGW IF+AFEK ++VES GY  L+DV      + +KM++F+L ETLKYLYLLF  +++I 
Sbjct: 465 WGWNIFQAFEKNSRVES-GYVGLKDVNT--GAKDNKMQSFFLAETLKYLYLLFSPSSVIS 521

Query: 180 LDKFVFNTEAHPFPI 194
           LD++VFNTEAHP  I
Sbjct: 522 LDEWVFNTEAHPLKI 536


>AT1G27520.1 | Symbols:  | glycoside hydrolase family 47 protein |
           chr1:9558752-9562091 FORWARD
          Length = 574

 Score = 75.5 bits (184), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 41/98 (41%), Positives = 59/98 (60%), Gaps = 4/98 (4%)

Query: 97  LRPETVESLFVLYRITQDPKYREWGWQIFEAFEKYTKVESAGYSSLEDVTMLPPRRRDKM 156
           LRPE  ES F LY+ T+DP Y + G  + ++   YTKV   G++S+ DVT +  +  D  
Sbjct: 385 LRPELAESTFYLYQATKDPWYLDVGESMVKSLNLYTKV-PGGFASVRDVTTM--QLEDHQ 441

Query: 157 ETFYLGETLKYLYLLFGDTNIIPLDKFVFNTEAHPFPI 194
            +F+L ET KYLYLLF D+  +    ++F TE HP  +
Sbjct: 442 HSFFLAETCKYLYLLFDDS-FVAKRNYIFTTEGHPIQV 478


>AT5G43710.1 | Symbols:  | glycoside hydrolase family 47 protein |
           chr5:17552252-17556523 REVERSE
          Length = 624

 Score = 68.2 bits (165), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 41/104 (39%), Positives = 62/104 (59%), Gaps = 9/104 (8%)

Query: 97  LRPETVESLFVLYRITQDPKYREWGWQIFEAFEKYTKVESAGYSSLEDVTMLPPRRRDKM 156
           LRPE +ES + LY+ T+DP+Y + G + F A  +Y      GY  + DV +   ++ D M
Sbjct: 373 LRPELIESTYWLYKATRDPRYLDAG-RDFVASLQYGAKCPCGYCHITDVEL--HKQEDHM 429

Query: 157 ETFYLGETLKYLYLLF----GDTNIIPLD--KFVFNTEAHPFPI 194
           E+F+L ET+KYL+LLF       N++     K++F+TE H  PI
Sbjct: 430 ESFFLAETVKYLWLLFDLAVDSDNLVDNGPYKYIFSTEGHLLPI 473