Jatropha Genome Database

JcCA0294151.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0294151.10 + phase: 0 /pseudo/partial
         (230 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G01800.1 | Symbols:  | short-chain dehydrogenase/reductase (S...   183   7e-47
AT1G01800.2 | Symbols:  | short-chain dehydrogenase/reductase (S...   183   8e-47
AT2G24190.1 | Symbols:  | short-chain dehydrogenase/reductase (S...   181   2e-46
AT2G24190.2 | Symbols:  | short-chain dehydrogenase/reductase (S...   181   3e-46
AT3G61220.1 | Symbols:  | short-chain dehydrogenase/reductase (S...   179   2e-45
AT5G51030.1 | Symbols:  | short-chain dehydrogenase/reductase (S...   128   3e-30
AT3G59710.1 | Symbols:  | short-chain dehydrogenase/reductase (S...   112   2e-25
AT5G61830.1 | Symbols:  | short-chain dehydrogenase/reductase (S...   112   2e-25

>AT1G01800.1 | Symbols:  | short-chain dehydrogenase/reductase (SDR)
           family protein | chr1:293396-294888 FORWARD
          Length = 295

 Score =  183 bits (465), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 87/179 (48%), Positives = 128/179 (71%), Gaps = 1/179 (0%)

Query: 52  IQEVIITTYEKAEECLNTNYYGVRRVTEALIPLLQLSTSGARIVNVSSLRGELRRIPSEE 111
           I +++  TYE  EEC+ TNYYGV+R+ EA+IPLLQ S S  RIV+++S  G+L  + +E 
Sbjct: 118 ISKIMSDTYEIVEECVKTNYYGVKRMCEAMIPLLQSSDS-PRIVSIASTMGKLENVSNEW 176

Query: 112 LRNELNDIETLTEEKLEAILKRFLRDLKENSLQAGGWSLMLPAYGISKATLNAYTRVLAK 171
            +  L+D E LTEEK++ ++  +L+D KE +LQ  GW  ++  Y +SKA + A TRVLAK
Sbjct: 177 AKGVLSDAENLTEEKIDEVINEYLKDYKEGALQVKGWPTVMSGYILSKAAVIALTRVLAK 236

Query: 172 RYPNMLINCVHPGYVNTDINWHTGPMPVEDGAKGPVKCALLPDGGPTGCYFDQTEVAEF 230
           R+ + +IN V PG+VNT+IN++TG + VE+GA  PVK AL+P+G P+G +FD+  V+ F
Sbjct: 237 RHKSFIINSVCPGFVNTEINFNTGILSVEEGAASPVKLALVPNGDPSGLFFDRANVSNF 295


>AT1G01800.2 | Symbols:  | short-chain dehydrogenase/reductase (SDR)
           family protein | chr1:293595-294888 FORWARD
          Length = 260

 Score =  183 bits (464), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 86/179 (48%), Positives = 128/179 (71%), Gaps = 1/179 (0%)

Query: 52  IQEVIITTYEKAEECLNTNYYGVRRVTEALIPLLQLSTSGARIVNVSSLRGELRRIPSEE 111
           I +++  TYE  EEC+ TNYYGV+R+ EA+IPLLQ S+   RIV+++S  G+L  + +E 
Sbjct: 83  ISKIMSDTYEIVEECVKTNYYGVKRMCEAMIPLLQ-SSDSPRIVSIASTMGKLENVSNEW 141

Query: 112 LRNELNDIETLTEEKLEAILKRFLRDLKENSLQAGGWSLMLPAYGISKATLNAYTRVLAK 171
            +  L+D E LTEEK++ ++  +L+D KE +LQ  GW  ++  Y +SKA + A TRVLAK
Sbjct: 142 AKGVLSDAENLTEEKIDEVINEYLKDYKEGALQVKGWPTVMSGYILSKAAVIALTRVLAK 201

Query: 172 RYPNMLINCVHPGYVNTDINWHTGPMPVEDGAKGPVKCALLPDGGPTGCYFDQTEVAEF 230
           R+ + +IN V PG+VNT+IN++TG + VE+GA  PVK AL+P+G P+G +FD+  V+ F
Sbjct: 202 RHKSFIINSVCPGFVNTEINFNTGILSVEEGAASPVKLALVPNGDPSGLFFDRANVSNF 260


>AT2G24190.1 | Symbols:  | short-chain dehydrogenase/reductase (SDR)
           family protein | chr2:10283740-10284934 REVERSE
          Length = 296

 Score =  181 bits (460), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 87/179 (48%), Positives = 128/179 (71%), Gaps = 2/179 (1%)

Query: 53  QEVIITTYEKAEECLNTNYYGVRRVTEALIPLLQLSTSGARIVNVSSLRGELRRIPSEEL 112
           +E I  TYE AEEC+  NYYG +R+ EA IPLLQLS S  RI+NVSS  G+++ + +E  
Sbjct: 119 EETITETYELAEECIKINYYGPKRMCEAFIPLLQLSDS-PRIINVSSFMGQVKNLVNEWA 177

Query: 113 RNELNDIETLTEEKLEAILKRFLRDLKENSLQAGGWSLMLPAYGISKATLNAYTRVLAKR 172
           +  L+D E LTE +++ ++ + L DLKE++ +   W+ ++ AY +SKA LNAYTR+LAK+
Sbjct: 178 KGILSDAENLTEVRIDQVINQLLNDLKEDTAKTKYWAKVMSAYVVSKAGLNAYTRILAKK 237

Query: 173 YPNMLINCVHPGYVNTDINWHTGPMPVEDGAKGPVKCALLP-DGGPTGCYFDQTEVAEF 230
           +P + +N V PG+V TD+N+ TG + VE+GA  PV+ ALLP    P+GC+FD+ +V+EF
Sbjct: 238 HPEIRVNSVCPGFVKTDMNFKTGILSVEEGASSPVRLALLPHQESPSGCFFDRKQVSEF 296


>AT2G24190.2 | Symbols:  | short-chain dehydrogenase/reductase (SDR)
           family protein | chr2:10283740-10284934 REVERSE
          Length = 301

 Score =  181 bits (460), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 87/179 (48%), Positives = 128/179 (71%), Gaps = 2/179 (1%)

Query: 53  QEVIITTYEKAEECLNTNYYGVRRVTEALIPLLQLSTSGARIVNVSSLRGELRRIPSEEL 112
           +E I  TYE AEEC+  NYYG +R+ EA IPLLQLS S  RI+NVSS  G+++ + +E  
Sbjct: 124 EETITETYELAEECIKINYYGPKRMCEAFIPLLQLSDS-PRIINVSSFMGQVKNLVNEWA 182

Query: 113 RNELNDIETLTEEKLEAILKRFLRDLKENSLQAGGWSLMLPAYGISKATLNAYTRVLAKR 172
           +  L+D E LTE +++ ++ + L DLKE++ +   W+ ++ AY +SKA LNAYTR+LAK+
Sbjct: 183 KGILSDAENLTEVRIDQVINQLLNDLKEDTAKTKYWAKVMSAYVVSKAGLNAYTRILAKK 242

Query: 173 YPNMLINCVHPGYVNTDINWHTGPMPVEDGAKGPVKCALLP-DGGPTGCYFDQTEVAEF 230
           +P + +N V PG+V TD+N+ TG + VE+GA  PV+ ALLP    P+GC+FD+ +V+EF
Sbjct: 243 HPEIRVNSVCPGFVKTDMNFKTGILSVEEGASSPVRLALLPHQESPSGCFFDRKQVSEF 301


>AT3G61220.1 | Symbols:  | short-chain dehydrogenase/reductase (SDR)
           family protein | chr3:22663025-22664316 FORWARD
          Length = 296

 Score =  179 bits (453), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 86/178 (48%), Positives = 124/178 (69%), Gaps = 2/178 (1%)

Query: 54  EVIITTYEKAEECLNTNYYGVRRVTEALIPLLQLSTSGARIVNVSSLRGELRRIPSEELR 113
           E+I  TYE  EEC+  NYYG +R+ EA IPLL+LS S  RIVNVSS  G+L+ + +E  +
Sbjct: 120 EIITETYELTEECIKINYYGPKRMCEAFIPLLKLSDS-PRIVNVSSSMGQLKNVLNEWAK 178

Query: 114 NELNDIETLTEEKLEAILKRFLRDLKENSLQAGGWSLMLPAYGISKATLNAYTRVLAKRY 173
             L+D E LTEE+++ ++ + L D KE +++   W+  + AY +SKA+LN YTRVLAK++
Sbjct: 179 GILSDAENLTEERIDQVINQLLNDFKEGTVKEKNWAKFMSAYVVSKASLNGYTRVLAKKH 238

Query: 174 PNMLINCVHPGYVNTDINWHTGPMPVEDGAKGPVKCALLP-DGGPTGCYFDQTEVAEF 230
           P   +N V PG+V TD+N+ TG + VE+GA  PV+ ALLP    P+GC+F + +V+EF
Sbjct: 239 PEFRVNAVCPGFVKTDMNFKTGVLSVEEGASSPVRLALLPHQETPSGCFFSRKQVSEF 296


>AT5G51030.1 | Symbols:  | short-chain dehydrogenase/reductase (SDR)
           family protein | chr5:20747862-20749352 REVERSE
          Length = 314

 Score =  128 bits (321), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 67/182 (36%), Positives = 106/182 (58%), Gaps = 10/182 (5%)

Query: 59  TYEKAEECLNTNYYGVRRVTEALIPLLQLSTSGARIVNVSS----LRGELRRIPSEELRN 114
           + E +   ++TNYYG + +  A+IPL++ +  GARIVNV+S    L+G   ++ +E++R 
Sbjct: 133 SVEFSHMVISTNYYGTKNIINAMIPLMRHACQGARIVNVTSRLGRLKGRHSKLENEDVRA 192

Query: 115 ELNDIETLTEEKLEAILKRFLRDLKENSLQAGGWSLMLPAYGISKATLNAYTRVLAKRYP 174
           +L D+++LTEE ++  +  FL+ ++E + ++GGW      Y +SK  +NAYTRVLAK   
Sbjct: 193 KLMDVDSLTEEIVDKTVSEFLKQVEEGTWESGGWPHSFTDYSVSKMAVNAYTRVLAKELS 252

Query: 175 ------NMLINCVHPGYVNTDINWHTGPMPVEDGAKGPVKCALLPDGGPTGCYFDQTEVA 228
                  +  NC  PG+V T +  + G +  EDGA   V  ALLPD   TG +F +    
Sbjct: 253 ERPEGEKIYANCFCPGWVKTAMTGYAGNVSAEDGADTGVWLALLPDQAITGKFFAERREI 312

Query: 229 EF 230
            F
Sbjct: 313 SF 314


>AT3G59710.1 | Symbols:  | short-chain dehydrogenase/reductase (SDR)
           family protein | chr3:22055220-22057156 REVERSE
          Length = 302

 Score =  112 bits (279), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 64/168 (38%), Positives = 98/168 (58%), Gaps = 6/168 (3%)

Query: 48  AINMIQEVIITTYEKAEECLNTNYYGVRRVTEALIPLLQLSTSGARIVNVSSLRGELRRI 107
           + N + E +I   ++ E  + TN+YG + +TEAL+PL + S S +RI+N+SS  G L ++
Sbjct: 117 SFNAVGENLI---KEPETIIKTNFYGAKLLTEALLPLFRRSVSVSRILNMSSRLGTLNKL 173

Query: 108 PSEELRNELNDIETLTEEKLEAILKRFLRDLKENSLQAGGWSLMLPAYGISKATLNAYTR 167
            S  +R  L   E LT E+++A L +FL+D+K  + +  GW    P Y ISK  LNAY+R
Sbjct: 174 RSPSIRRILES-EDLTNEQIDATLTQFLQDVKSGTWEKQGWPENWPDYAISKLALNAYSR 232

Query: 168 VLAKRY--PNMLINCVHPGYVNTDINWHTGPMPVEDGAKGPVKCALLP 213
           VLA+RY    + +NC+ PG+  T +    G    ++ A    K  LLP
Sbjct: 233 VLARRYDGKKLSVNCLCPGFTRTSMTGGQGTHTADEAAAIVAKLVLLP 280


>AT5G61830.1 | Symbols:  | short-chain dehydrogenase/reductase (SDR)
           family protein | chr5:24837335-24838788 FORWARD
          Length = 316

 Score =  112 bits (279), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 65/183 (35%), Positives = 104/183 (56%), Gaps = 11/183 (6%)

Query: 59  TYEKAEECLNTNYYGVRRVTEALIPLLQLSTSGARIVNVSS----LRGELRRIPSEELRN 114
           T E AE  ++TNY G + +T+A+IPL++ S  GAR+VNVSS    + G   R+ + ELR+
Sbjct: 134 TVEFAETVISTNYQGTKNMTKAMIPLMRPSPHGARVVNVSSRLGRVNGRRNRLANVELRD 193

Query: 115 ELNDIETLTEEKLEAILKRFLRDLKENSLQAGGWSLMLPAYGISKATLNAYTRVLAKRY- 173
           +L+  + LTEE ++  + +F+  +K+ + ++GGW      Y +SK  +NAYTR++AK   
Sbjct: 194 QLSSPDLLTEELIDRTVSKFINQVKDGTWESGGWPQTFTDYSMSKLAVNAYTRLMAKELE 253

Query: 174 -----PNMLINCVHPGYVNTDINWHTGPMPVEDGAKGPVKCAL-LPDGGPTGCYFDQTEV 227
                  + +N   PG+V T +  + G MP ED A   V  +L L +   TG +F +   
Sbjct: 254 RRGEEEKIYVNSFCPGWVKTAMTGYAGNMPPEDAADTGVWLSLVLSEEAVTGKFFAERRE 313

Query: 228 AEF 230
             F
Sbjct: 314 INF 316