Jatropha Genome Database
- JcCA0292601.20
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0292601.20 + phase: 0 /partial
(402 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G32010.1 | Symbols: HSL1, HSI2-L1, VAL2 | HSL1 (HSI2-LIKE 1);... 312 2e-85
AT2G30470.1 | Symbols: HSI2, VAL1 | HSI2 (HIGH-LEVEL EXPRESSION ... 251 5e-67
AT4G21550.1 | Symbols: VAL3 | VAL3 (VP1/ABI3-LIKE 3); transcript... 128 6e-30
AT3G26790.1 | Symbols: FUS3 | FUS3 (FUSCA 3); DNA binding / tran... 92 4e-19
AT3G24650.1 | Symbols: ABI3, SIS10 | ABI3 (ABA INSENSITIVE 3); D... 84 2e-16
AT1G28300.1 | Symbols: LEC2 | LEC2 (LEAFY COTYLEDON 2); DNA bind... 79 5e-15
AT4G01500.1 | Symbols: NGA4 | NGA4 (NGATHA4); transcription fact... 70 3e-12
AT2G46870.1 | Symbols: NGA1 | NGA1 (NGATHA1); transcription fact... 69 4e-12
AT1G13260.1 | Symbols: RAV1 | RAV1; DNA binding / transcription ... 69 8e-12
AT1G01030.1 | Symbols: NGA3 | NGA3 (NGATHA3); transcription fact... 67 3e-11
AT1G68840.1 | Symbols: RAV2, RAP2.8, TEM2 | RAV2 (REGULATOR OF T... 66 3e-11
AT3G61970.1 | Symbols: NGA2 | NGA2 (NGATHA2); transcription fact... 66 5e-11
AT3G25730.1 | Symbols: | AP2 domain-containing transcription fa... 65 6e-11
AT5G06250.2 | Symbols: | transcription factor | chr5:1892714-18... 65 7e-11
AT5G06250.1 | Symbols: | transcription factor | chr5:1892714-18... 65 1e-10
AT2G36080.1 | Symbols: | DNA-binding protein, putative | chr2:1... 64 1e-10
AT2G36080.2 | Symbols: | DNA-binding protein, putative | chr2:1... 64 2e-10
AT3G11580.2 | Symbols: | DNA-binding protein, putative | chr3:3... 64 2e-10
AT3G11580.1 | Symbols: | DNA-binding protein, putative | chr3:3... 63 3e-10
AT1G25560.1 | Symbols: TEM1 | TEM1 (TEMPRANILLO 1); transcriptio... 62 7e-10
AT1G34170.1 | Symbols: ARF13 | transcription factor | chr1:12444... 49 5e-06
AT1G34170.2 | Symbols: ARF13 | transcription factor | chr1:12444... 49 6e-06
AT1G34170.3 | Symbols: | transcription factor | chr1:12443578-1... 49 6e-06
>AT4G32010.1 | Symbols: HSL1, HSI2-L1, VAL2 | HSL1 (HSI2-LIKE 1);
transcription factor | chr4:15481231-15484897 FORWARD
Length = 780
Score = 312 bits (800), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 192/412 (46%), Positives = 236/412 (57%), Gaps = 64/412 (15%)
Query: 5 ILTNVICTIRSPV-HWKQG---SEGKTALAYGYLHRDFLRLVYCDTYHLEESGWRECYIS 60
+ N +C S WK+G G A + + ++C+ +H +ESGWREC
Sbjct: 6 VCMNALCGAASTSGEWKKGWPMRSGDLASLCDKCGCAYEQSIFCEVFHAKESGWRECNSC 65
Query: 61 EKRLHCGCIASKSLLQLLDFGGVGCTSCAKNYRLHPIRSDEIPNGFGLLINNACDLESTP 120
+KRLHCGCIAS+ +++LL+ GGV C SCAK L + NG D S
Sbjct: 66 DKRLHCGCIASRFMMELLENGGVTCISCAKKSGLISMNVSHESNGK--------DFPSFA 117
Query: 121 LENRVAGRTFDEGKLAQLCRLMEANAPNLLCQSEGADTNAGLGQFRQEEVMHQIVEXXXX 180
V G + L L + T++ L Q +QEE +
Sbjct: 118 SAEHV-GSVLERTNLKHLLHFQRIDP-----------THSSL-QMKQEESL--------- 155
Query: 181 XXXXXXXXXXXXXXXXPSILDM----RDIHGSHAQPSLSMSMGAPSGTASFAPYPCGVVE 236
PS LD + AQP+LS+S+G T +P+ V+
Sbjct: 156 ---------------LPSSLDALRHKTERKELSAQPNLSISLGP---TLMTSPFHDAAVD 197
Query: 237 GKEQSKTSPFQQGQRSRPILPKP--SKPVLAGSSETNKAAVSELRIARPPAEGRGKNQLL 294
+ ++ S FQ RSR +LPKP S P+ AG E + + VS++ +ARPP EGRGK QLL
Sbjct: 198 DRSKT-NSIFQLAPRSRQLLPKPANSAPIAAGM-EPSGSLVSQIHVARPPPEGRGKTQLL 255
Query: 295 PRYWPRITDQELQQLSGDL----NSNIVPLFEKVLSASDAGRIGRLVLPKACAEAYFPPI 350
PRYWPRITDQEL QLSG NS I+PLFEKVLSASDAGRIGRLVLPKACAEAYFPPI
Sbjct: 256 PRYWPRITDQELLQLSGQYPHLSNSKIIPLFEKVLSASDAGRIGRLVLPKACAEAYFPPI 315
Query: 351 SQSEGLPLRIQDVKGREWTFQFRFWPNNNSRMYVLEGVTPCIQSMQLQAGDT 402
S EGLPL+IQD+KG+EW FQFRFWPNNNSRMYVLEGVTPCIQSMQLQAGDT
Sbjct: 316 SLPEGLPLKIQDIKGKEWVFQFRFWPNNNSRMYVLEGVTPCIQSMQLQAGDT 367
>AT2G30470.1 | Symbols: HSI2, VAL1 | HSI2 (HIGH-LEVEL EXPRESSION OF
SUGAR-INDUCIBLE GENE 2); transcription factor/
transcription repressor | chr2:12980904-12984724 REVERSE
Length = 790
Score = 251 bits (641), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 128/195 (65%), Positives = 149/195 (76%), Gaps = 10/195 (5%)
Query: 211 QPSLSMSMGAPSGTASFAPYPCGVVEGKEQSKTSPFQQGQ---RSRPILPKPSKPVLAGS 267
QPSL+M + + SFA VEG + SP Q + IL KPS+P ++
Sbjct: 189 QPSLNMGLAVNPFSPSFATE---AVEGMKH--ISPSQSNMVHCSASNILQKPSRPAISTP 243
Query: 268 SETNKAAVSELRIARPPAEGRGKNQLLPRYWPRITDQELQQLSGDLNSNIVPLFEKVLSA 327
+K+A + RI RPP EGRG+ LLPRYWP+ TD+E+QQ+SG+LN NIVPLFEK LSA
Sbjct: 244 PVASKSA--QARIGRPPVEGRGRGHLLPRYWPKYTDKEVQQISGNLNLNIVPLFEKTLSA 301
Query: 328 SDAGRIGRLVLPKACAEAYFPPISQSEGLPLRIQDVKGREWTFQFRFWPNNNSRMYVLEG 387
SDAGRIGRLVLPKACAEAYFPPISQSEG+PL+IQDV+GREWTFQFR+WPNNNSRMYVLEG
Sbjct: 302 SDAGRIGRLVLPKACAEAYFPPISQSEGIPLKIQDVRGREWTFQFRYWPNNNSRMYVLEG 361
Query: 388 VTPCIQSMQLQAGDT 402
VTPCIQSM LQAGDT
Sbjct: 362 VTPCIQSMMLQAGDT 376
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 66/112 (58%), Gaps = 3/112 (2%)
Query: 1 MFFVILTNVICTIRSPVHWKQGSEGKTALAYGYLHR---DFLRLVYCDTYHLEESGWREC 57
M + N C S V WK+G ++ L +R + ++C+ +H ++SGWREC
Sbjct: 6 MGSKMCMNASCGTTSTVEWKKGWPLRSGLLADLCYRCGSAYESSLFCEQFHKDQSGWREC 65
Query: 58 YISEKRLHCGCIASKSLLQLLDFGGVGCTSCAKNYRLHPIRSDEIPNGFGLL 109
Y+ KRLHCGCIASK ++L+D+GGVGC++CA ++L+ E P F L
Sbjct: 66 YLCSKRLHCGCIASKVTIELMDYGGVGCSTCACCHQLNLNTRGENPGVFSRL 117
>AT4G21550.1 | Symbols: VAL3 | VAL3 (VP1/ABI3-LIKE 3); transcription
factor | chr4:11463987-11468486 FORWARD
Length = 721
Score = 128 bits (322), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 63/123 (51%), Positives = 89/123 (72%), Gaps = 8/123 (6%)
Query: 286 EGRGKNQLLPRYWPRIT--DQELQQLSGDLNSNIVPLFE----KVLSASDAGRIGRLVLP 339
E GK Q++PR+WP+++ +Q LQ S + S+++ K+LSA+D G+ RLVLP
Sbjct: 262 ETPGKYQVVPRFWPKVSYKNQVLQNQSKEYPSSLIDTTLEYNFKILSATDTGK--RLVLP 319
Query: 340 KACAEAYFPPISQSEGLPLRIQDVKGREWTFQFRFWPNNNSRMYVLEGVTPCIQSMQLQA 399
K AEA+ P +S ++G+PL +QD G+EW FQFRFWP++ R+YVLEGVTP IQ++QLQA
Sbjct: 320 KKYAEAFLPQLSHTKGVPLTVQDPMGKEWRFQFRFWPSSKGRIYVLEGVTPFIQTLQLQA 379
Query: 400 GDT 402
GDT
Sbjct: 380 GDT 382
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 36/60 (60%), Gaps = 5/60 (8%)
Query: 43 YCDTYHLEESGWRECYISEK----RLHCGCIASKSLLQLLDFGGVGCTSCA-KNYRLHPI 97
+CD +H SGWR C K R+HCGCIAS S L+D GG+ C +CA K + L PI
Sbjct: 37 FCDVFHQRASGWRCCESCGKHFVQRIHCGCIASASAYTLMDAGGIECLACARKKFALSPI 96
>AT3G26790.1 | Symbols: FUS3 | FUS3 (FUSCA 3); DNA binding /
transcription activator/ transcription factor |
chr3:9854025-9855748 REVERSE
Length = 313
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 56/83 (67%), Gaps = 1/83 (1%)
Query: 320 LFEKVLSASDAGRIGRLVLPKACAEAYFPPISQSEGLPLRIQDVKG-REWTFQFRFWPNN 378
LF+K L SD + R++LPK AEA+ P + EG+P+R++D+ G WTF++R+WPNN
Sbjct: 91 LFQKELKNSDVSSLRRMILPKKAAEAHLPALECKEGIPIRMEDLDGFHVWTFKYRYWPNN 150
Query: 379 NSRMYVLEGVTPCIQSMQLQAGD 401
NSRMYVLE + + LQ GD
Sbjct: 151 NSRMYVLENTGDFVNAHGLQLGD 173
>AT3G24650.1 | Symbols: ABI3, SIS10 | ABI3 (ABA INSENSITIVE 3); DNA
binding / basal transcription repressor/ transcription
activator/ transcription factor | chr3:8997911-9000780
FORWARD
Length = 720
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 55/87 (63%), Gaps = 1/87 (1%)
Query: 316 NIVPLFEKVLSASDAGRIGRLVLPKACAEAYFPPISQSEGLPLRIQDV-KGREWTFQFRF 374
N+ L +KVL SD G +GR+VLPK AE + P + +G+ L ++D+ R W ++RF
Sbjct: 567 NLRFLLQKVLKQSDVGNLGRIVLPKKEAETHLPELEARDGISLAMEDIGTSRVWNMRYRF 626
Query: 375 WPNNNSRMYVLEGVTPCIQSMQLQAGD 401
WPNN SRMY+LE +++ LQ GD
Sbjct: 627 WPNNKSRMYLLENTGDFVKTNGLQEGD 653
>AT1G28300.1 | Symbols: LEC2 | LEC2 (LEAFY COTYLEDON 2); DNA binding
/ transcription factor | chr1:9897054-9899838 REVERSE
Length = 363
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 65/105 (61%), Gaps = 4/105 (3%)
Query: 300 RITDQE--LQQLSGDLNSNIVPLFEKVLSASDAGRIGRLVLPKACAEAYFPPISQSEGLP 357
+I+D++ QQ + D N + L EK L SD G +GR+VLPK AEA P +S EG+
Sbjct: 149 QISDKKDSYQQSTFD-NKKLRVLCEKELKNSDVGSLGRIVLPKRDAEANLPKLSDKEGIV 207
Query: 358 LRIQDV-KGREWTFQFRFWPNNNSRMYVLEGVTPCIQSMQLQAGD 401
++++DV + W+F+++FW NN SRMYVLE ++ + GD
Sbjct: 208 VQMRDVFSMQSWSFKYKFWSNNKSRMYVLENTGEFVKQNGAEIGD 252
>AT4G01500.1 | Symbols: NGA4 | NGA4 (NGATHA4); transcription factor
| chr4:639791-640792 FORWARD
Length = 333
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 53/84 (63%), Gaps = 3/84 (3%)
Query: 320 LFEKVLSASDAGRIGRLVLPKACAEAYFPPISQSEGLPLRIQDVKGREWTFQFRFWPNNN 379
+F+KVL+ SD G++ RLV+PK AE +FP G L QD G+ W F++ +W N+
Sbjct: 35 MFDKVLTPSDVGKLNRLVIPKQHAENFFPLEDNQNGTVLDFQDKNGKMWRFRYSYW--NS 92
Query: 380 SRMYVL-EGVTPCIQSMQLQAGDT 402
S+ YV+ +G + ++ +L AGDT
Sbjct: 93 SQSYVMTKGWSRFVKEKKLFAGDT 116
>AT2G46870.1 | Symbols: NGA1 | NGA1 (NGATHA1); transcription factor
| chr2:19261313-19262245 FORWARD
Length = 310
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 57/85 (67%), Gaps = 5/85 (5%)
Query: 320 LFEKVLSASDAGRIGRLVLPKACAEAYFPPISQS--EGLPLRIQDVKGREWTFQFRFWPN 377
+F+KV++ SD G++ RLV+PK AE +FP S S +GL L +D+ G+ W F++ +W
Sbjct: 34 MFDKVVTPSDVGKLNRLVIPKQHAERFFPLDSSSNEKGLLLNFEDLTGKSWRFRYSYW-- 91
Query: 378 NNSRMYVL-EGVTPCIQSMQLQAGD 401
N+S+ YV+ +G + ++ +L AGD
Sbjct: 92 NSSQSYVMTKGWSRFVKDKKLDAGD 116
>AT1G13260.1 | Symbols: RAV1 | RAV1; DNA binding / transcription
factor/ transcription repressor | chr1:4542386-4543420
FORWARD
Length = 344
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 56/86 (65%), Gaps = 6/86 (6%)
Query: 320 LFEKVLSASDAGRIGRLVLPKACAEAYFPPISQS---EGLPLRIQDVKGREWTFQFRFWP 376
LFEK ++ SD G++ RLV+PK AE +FP S + +G+ L +DV G+ W F++ +W
Sbjct: 187 LFEKAVTPSDVGKLNRLVIPKHHAEKHFPLPSSNVSVKGVLLNFEDVNGKVWRFRYSYW- 245
Query: 377 NNNSRMYVL-EGVTPCIQSMQLQAGD 401
N+S+ YVL +G + ++ L+AGD
Sbjct: 246 -NSSQSYVLTKGWSRFVKEKNLRAGD 270
>AT1G01030.1 | Symbols: NGA3 | NGA3 (NGATHA3); transcription factor
| chr1:11864-12940 REVERSE
Length = 358
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 54/85 (63%), Gaps = 5/85 (5%)
Query: 320 LFEKVLSASDAGRIGRLVLPKACAEAYFPPISQS--EGLPLRIQDVKGREWTFQFRFWPN 377
+F+KV++ SD G++ RLV+PK AE YFP S + G L QD G+ W F++ +W
Sbjct: 55 MFDKVVTPSDVGKLNRLVIPKQHAERYFPLDSSNNQNGTLLNFQDRNGKMWRFRYSYW-- 112
Query: 378 NNSRMYVL-EGVTPCIQSMQLQAGD 401
N+S+ YV+ +G + ++ +L AGD
Sbjct: 113 NSSQSYVMTKGWSRFVKEKKLDAGD 137
>AT1G68840.1 | Symbols: RAV2, RAP2.8, TEM2 | RAV2 (REGULATOR OF THE
ATPASE OF THE VACUOLAR MEMBRANE); DNA binding /
transcription factor/ transcription repressor |
chr1:25880442-25881500 FORWARD
Length = 352
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 56/88 (63%), Gaps = 7/88 (7%)
Query: 320 LFEKVLSASDAGRIGRLVLPKACAEAYFPPISQS----EGLPLRIQDVKGREWTFQFRFW 375
LFEK ++ SD G++ RLV+PK AE +FP S S +G+ + +DV G+ W F++ +W
Sbjct: 187 LFEKAVTPSDVGKLNRLVIPKQHAEKHFPLPSPSPAVTKGVLINFEDVNGKVWRFRYSYW 246
Query: 376 PNNNSRMYVL-EGVTPCIQSMQLQAGDT 402
N+S+ YVL +G + ++ L+AGD
Sbjct: 247 --NSSQSYVLTKGWSRFVKEKNLRAGDV 272
>AT3G61970.1 | Symbols: NGA2 | NGA2 (NGATHA2); transcription factor
| chr3:22951829-22952728 FORWARD
Length = 299
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 54/88 (61%), Gaps = 8/88 (9%)
Query: 320 LFEKVLSASDAGRIGRLVLPKACAEAYFP-----PISQSEGLPLRIQDVKGREWTFQFRF 374
+F+KV++ SD G++ RLV+PK AE YFP ++GL L +D G W F++ +
Sbjct: 22 MFDKVVTPSDVGKLNRLVIPKQHAERYFPLDNSTTNDSNKGLLLNFEDRSGNSWRFRYSY 81
Query: 375 WPNNNSRMYVL-EGVTPCIQSMQLQAGD 401
W N+S+ YV+ +G + ++ +L AGD
Sbjct: 82 W--NSSQSYVMTKGWSRFVKDKKLDAGD 107
>AT3G25730.1 | Symbols: | AP2 domain-containing transcription
factor, putative | chr3:9396505-9397506 FORWARD
Length = 333
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 57/88 (64%), Gaps = 8/88 (9%)
Query: 320 LFEKVLSASDAGRIGRLVLPKACAEAYFP-PISQS----EGLPLRIQDVKGREWTFQFRF 374
LFEK ++ SD G++ RLV+PK AE +FP P+ + +G+ L +DV G+ W F++ +
Sbjct: 182 LFEKTVTPSDVGKLNRLVIPKHQAEKHFPLPLGNNNVSVKGMLLNFEDVNGKVWRFRYSY 241
Query: 375 WPNNNSRMYVL-EGVTPCIQSMQLQAGD 401
W N+S+ YVL +G + ++ +L AGD
Sbjct: 242 W--NSSQSYVLTKGWSRFVKEKRLCAGD 267
>AT5G06250.2 | Symbols: | transcription factor |
chr5:1892714-1894058 REVERSE
Length = 282
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 53/95 (55%), Gaps = 15/95 (15%)
Query: 320 LFEKVLSASDAGRIGRLVLPKACAEAYFP------------PISQSEGLPLRIQDVKGRE 367
LFEK L+ SD G++ RLV+PK AE YFP S +G+ L +D G+
Sbjct: 45 LFEKSLTPSDVGKLNRLVIPKQHAEKYFPLNAVLVSSAAADTSSSEKGMLLSFEDESGKS 104
Query: 368 WTFQFRFWPNNNSRMYVL-EGVTPCIQSMQLQAGD 401
W F++ +W N+S+ YVL +G + ++ QL GD
Sbjct: 105 WRFRYSYW--NSSQSYVLTKGWSRFVKDKQLDPGD 137
>AT5G06250.1 | Symbols: | transcription factor |
chr5:1892714-1894058 REVERSE
Length = 267
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 53/95 (55%), Gaps = 15/95 (15%)
Query: 320 LFEKVLSASDAGRIGRLVLPKACAEAYFP------------PISQSEGLPLRIQDVKGRE 367
LFEK L+ SD G++ RLV+PK AE YFP S +G+ L +D G+
Sbjct: 45 LFEKSLTPSDVGKLNRLVIPKQHAEKYFPLNAVLVSSAAADTSSSEKGMLLSFEDESGKS 104
Query: 368 WTFQFRFWPNNNSRMYVL-EGVTPCIQSMQLQAGD 401
W F++ +W N+S+ YVL +G + ++ QL GD
Sbjct: 105 WRFRYSYW--NSSQSYVLTKGWSRFVKDKQLDPGD 137
>AT2G36080.1 | Symbols: | DNA-binding protein, putative |
chr2:15148612-15151411 REVERSE
Length = 244
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 54/89 (60%), Gaps = 8/89 (8%)
Query: 320 LFEKVLSASDAGRIGRLVLPKACAEAYFPPISQ-----SEGLPLRIQDVKGREWTFQFRF 374
LFEK L+ SD G++ RLV+PK AE YFP + +GL L +D +G+ W F++ +
Sbjct: 37 LFEKPLTPSDVGKLNRLVIPKQHAERYFPLAAAAADAVEKGLLLCFEDEEGKPWRFRYSY 96
Query: 375 WPNNNSRMYVL-EGVTPCIQSMQLQAGDT 402
W N+S+ YVL +G + ++ L AGD
Sbjct: 97 W--NSSQSYVLTKGWSRYVKEKHLDAGDV 123
>AT2G36080.2 | Symbols: | DNA-binding protein, putative |
chr2:15150890-15151411 REVERSE
Length = 173
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 54/89 (60%), Gaps = 8/89 (8%)
Query: 320 LFEKVLSASDAGRIGRLVLPKACAEAYFPPISQ-----SEGLPLRIQDVKGREWTFQFRF 374
LFEK L+ SD G++ RLV+PK AE YFP + +GL L +D +G+ W F++ +
Sbjct: 37 LFEKPLTPSDVGKLNRLVIPKQHAERYFPLAAAAADAVEKGLLLCFEDEEGKPWRFRYSY 96
Query: 375 WPNNNSRMYVL-EGVTPCIQSMQLQAGDT 402
W N+S+ YVL +G + ++ L AGD
Sbjct: 97 W--NSSQSYVLTKGWSRYVKEKHLDAGDV 123
>AT3G11580.2 | Symbols: | DNA-binding protein, putative |
chr3:3650579-3651271 REVERSE
Length = 230
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 55/97 (56%), Gaps = 16/97 (16%)
Query: 320 LFEKVLSASDAGRIGRLVLPKACAEAYFP------------PISQSE-GLPLRIQDVKGR 366
LFEK L+ SD G++ RLV+PK AE YFP ++ +E G+ L +D G+
Sbjct: 28 LFEKSLTPSDVGKLNRLVIPKQHAEKYFPLNNNNNNGGSGDDVATTEKGMLLSFEDESGK 87
Query: 367 EWTFQFRFWPNNNSRMYVL-EGVTPCIQSMQLQAGDT 402
W F++ +W N+S+ YVL +G + ++ L AGD
Sbjct: 88 CWKFRYSYW--NSSQSYVLTKGWSRYVKDKHLDAGDV 122
>AT3G11580.1 | Symbols: | DNA-binding protein, putative |
chr3:3649165-3651271 REVERSE
Length = 267
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 55/97 (56%), Gaps = 16/97 (16%)
Query: 320 LFEKVLSASDAGRIGRLVLPKACAEAYFP------------PISQSE-GLPLRIQDVKGR 366
LFEK L+ SD G++ RLV+PK AE YFP ++ +E G+ L +D G+
Sbjct: 28 LFEKSLTPSDVGKLNRLVIPKQHAEKYFPLNNNNNNGGSGDDVATTEKGMLLSFEDESGK 87
Query: 367 EWTFQFRFWPNNNSRMYVL-EGVTPCIQSMQLQAGDT 402
W F++ +W N+S+ YVL +G + ++ L AGD
Sbjct: 88 CWKFRYSYW--NSSQSYVLTKGWSRYVKDKHLDAGDV 122
>AT1G25560.1 | Symbols: TEM1 | TEM1 (TEMPRANILLO 1); transcription
factor | chr1:8981891-8982976 REVERSE
Length = 361
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 57/93 (61%), Gaps = 13/93 (13%)
Query: 320 LFEKVLSASDAGRIGRLVLPKACAEAYFP-PI---------SQSEGLPLRIQDVKGREWT 369
LFEK ++ SD G++ RLV+PK AE +FP P S ++G+ + ++D G+ W
Sbjct: 194 LFEKTVTPSDVGKLNRLVIPKQHAEKHFPLPAMTTAMGMNPSPTKGVLINLEDRTGKVWR 253
Query: 370 FQFRFWPNNNSRMYVL-EGVTPCIQSMQLQAGD 401
F++ +W N+S+ YVL +G + ++ L+AGD
Sbjct: 254 FRYSYW--NSSQSYVLTKGWSRFVKEKNLRAGD 284
>AT1G34170.1 | Symbols: ARF13 | transcription factor |
chr1:12444265-12446764 REVERSE
Length = 505
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 299 PRITDQELQQLSGDLNSNIVPLFEKVLSASDAGRIGRLVLPKACAEAYFPPISQSEGLP- 357
P T+ + D IV F K+L+ASD G L++PK A FPP+ S+ +
Sbjct: 102 PDTTEVMTHNTTMDTRRPIVYFFSKILTASDVSLSGGLIIPKQYAIECFPPLDMSQPIST 161
Query: 358 --LRIQDVKGREWTFQFRF 374
L +D+ G+EW+F+ F
Sbjct: 162 QNLVAKDLYGQEWSFKHVF 180
>AT1G34170.2 | Symbols: ARF13 | transcription factor |
chr1:12444265-12446764 REVERSE
Length = 479
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 299 PRITDQELQQLSGDLNSNIVPLFEKVLSASDAGRIGRLVLPKACAEAYFPPISQSEGLP- 357
P T+ + D IV F K+L+ASD G L++PK A FPP+ S+ +
Sbjct: 102 PDTTEVMTHNTTMDTRRPIVYFFSKILTASDVSLSGGLIIPKQYAIECFPPLDMSQPIST 161
Query: 358 --LRIQDVKGREWTFQFRF 374
L +D+ G+EW+F+ F
Sbjct: 162 QNLVAKDLYGQEWSFKHVF 180
>AT1G34170.3 | Symbols: | transcription factor |
chr1:12443578-12446764 REVERSE
Length = 546
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 299 PRITDQELQQLSGDLNSNIVPLFEKVLSASDAGRIGRLVLPKACAEAYFPPISQSEGLP- 357
P T+ + D IV F K+L+ASD G L++PK A FPP+ S+ +
Sbjct: 102 PDTTEVMTHNTTMDTRRPIVYFFSKILTASDVSLSGGLIIPKQYAIECFPPLDMSQPIST 161
Query: 358 --LRIQDVKGREWTFQFRF 374
L +D+ G+EW+F+ F
Sbjct: 162 QNLVAKDLYGQEWSFKHVF 180